PDB Short entry for 1CD9 HEADER CYTOKINE 08-MAR-99 1CD9 TITLE 2:2 COMPLEX OF G-CSF WITH ITS RECEPTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (GRANULOCYTE COLONY-STIMULATING FACTOR); COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: G-CSF; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PROTEIN (G-CSF RECEPTOR); COMPND 8 CHAIN: B, D; COMPND 9 FRAGMENT: CRH REGION (BN DOMAIN:D1-108, BC DOMAIN:D109-215); COMPND 10 SYNONYM: G-CSF-R; COMPND 11 ENGINEERED: YES; COMPND 12 OTHER_DETAILS: N-LINKED GLYCOSYLATION AT B10 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 CELLULAR_LOCATION: EXTRACELLULAR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 12 ORGANISM_TAXID: 10090; SOURCE 13 CELLULAR_LOCATION: CELLULAR MEMBRANE; SOURCE 14 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 15 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 17 EXPRESSION_SYSTEM_CELL_LINE: SF-9; SOURCE 18 EXPRESSION_SYSTEM_CELLULAR_LOCATION: NUCLEUS; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: VIRUS; SOURCE 20 EXPRESSION_SYSTEM_VECTOR: AUTOGRAPHA CALIFORNICA NUCLEAR SOURCE 21 POLYHEDROSIS VIRUS KEYWDS CLASS1 CYTOKINE, HEMATOPOIETIC RECEPTOR, SIGNAL TRANSDUCTION, KEYWDS 2 CYTOKINE EXPDTA X-RAY DIFFRACTION AUTHOR M.ARITOMI,N.KUNISHIMA,T.OKAMOTO,R.KUROKI,Y.OTA,K.MORIKAWA REVDAT 5 27-DEC-23 1CD9 1 HETSYN REVDAT 4 29-JUL-20 1CD9 1 COMPND REMARK SEQADV HETNAM REVDAT 4 2 1 LINK SITE REVDAT 3 13-JUL-11 1CD9 1 VERSN REVDAT 2 24-FEB-09 1CD9 1 VERSN REVDAT 1 08-MAR-00 1CD9 0 JRNL AUTH M.ARITOMI,N.KUNISHIMA,T.OKAMOTO,R.KUROKI,Y.OTA,K.MORIKAWA JRNL TITL ATOMIC STRUCTURE OF THE GCSF-RECEPTOR COMPLEX SHOWING A NEW JRNL TITL 2 CYTOKINE-RECEPTOR RECOGNITION SCHEME. JRNL REF NATURE V. 401 713 1999 JRNL REFN ISSN 0028-0836 JRNL PMID 10537111 JRNL DOI 10.1038/44394 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 35277 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.319 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.400 REMARK 3 FREE R VALUE TEST SET COUNT : 510 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5792 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 58.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.012 ; 0.020 REMARK 3 ANGLE DISTANCE (A) : 0.033 ; 0.040 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : 0.041 ; 0.050 REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : 0.300 ; NULL REMARK 3 MULTIPLE TORSION (A) : 0.300 ; NULL REMARK 3 H-BOND (X...Y) (A) : 0.300 ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : 15.000; NULL REMARK 3 PLANAR (DEGREES) : 7.000 ; NULL REMARK 3 STAGGERED (DEGREES) : 15.000; NULL REMARK 3 TRANSVERSE (DEGREES) : 20.000; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.000 ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.000 ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : 2.000 ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.000 ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: X-PLOR WAS ALSO USED REMARK 4 REMARK 4 1CD9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAR-99. REMARK 100 THE DEPOSITION ID IS D_1000000600. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-99 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : SILICON CRYSTAL REMARK 200 OPTICS : BENT MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35565 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIRAS REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 62.73350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 62.73350 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 186.38550 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 62.73350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 93.19275 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 62.73350 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 279.57825 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 62.73350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 279.57825 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 62.73350 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 93.19275 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 62.73350 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 62.73350 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 186.38550 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 62.73350 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 62.73350 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 186.38550 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 62.73350 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 279.57825 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 62.73350 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 93.19275 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 62.73350 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 93.19275 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 62.73350 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 279.57825 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 62.73350 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 62.73350 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 186.38550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 PRO A 3 REMARK 465 LEU A 4 REMARK 465 GLY B 120 REMARK 465 PRO B 121 REMARK 465 ASP B 122 REMARK 465 VAL B 123 REMARK 465 VAL B 124 REMARK 465 SER B 125 REMARK 465 HIS B 126 REMARK 465 LYS B 214 REMARK 465 ALA B 215 REMARK 465 MET C 1 REMARK 465 THR C 2 REMARK 465 PRO C 3 REMARK 465 LEU C 4 REMARK 465 GLY C 5 REMARK 465 PRO C 6 REMARK 465 ALA D 1 REMARK 465 ILE D 119 REMARK 465 GLY D 120 REMARK 465 PRO D 121 REMARK 465 ASP D 122 REMARK 465 VAL D 123 REMARK 465 VAL D 124 REMARK 465 SER D 125 REMARK 465 HIS D 126 REMARK 465 LYS D 214 REMARK 465 ALA D 215 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 71 CG CD OE1 NE2 REMARK 470 LEU A 131 CG CD1 CD2 REMARK 470 LYS B 63 CG CD CE NZ REMARK 470 ARG B 64 CG CD NE CZ NH1 NH2 REMARK 470 HIS C 53 CG ND1 CD2 CE1 NE2 REMARK 470 TRP C 59 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP C 59 CZ3 CH2 REMARK 470 GLN C 68 CG CD OE1 NE2 REMARK 470 LEU C 70 CG CD1 CD2 REMARK 470 GLN C 71 CG CD OE1 NE2 REMARK 470 LYS D 62 CG CD CE NZ REMARK 470 LYS D 63 CG CD CE NZ REMARK 470 ARG D 64 CG CD NE CZ NH1 NH2 REMARK 470 GLN D 127 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 139 C - N - CA ANGL. DEV. = 11.0 DEGREES REMARK 500 CYS B 177 CA - CB - SG ANGL. DEV. = 6.8 DEGREES REMARK 500 CYS C 65 CA - CB - SG ANGL. DEV. = 6.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 6 48.43 -73.32 REMARK 500 LYS A 41 31.32 36.53 REMARK 500 LEU A 62 27.71 -141.03 REMARK 500 GLN A 68 144.41 -170.82 REMARK 500 ALA A 69 -52.51 -122.49 REMARK 500 GLU A 94 46.88 36.46 REMARK 500 ILE A 96 -63.42 66.60 REMARK 500 ALA A 128 109.72 -47.67 REMARK 500 PRO A 133 109.50 -49.89 REMARK 500 GLN A 135 124.25 -34.26 REMARK 500 HIS B 33 -1.40 84.24 REMARK 500 SER B 45 -151.54 -142.31 REMARK 500 ASP B 48 -2.16 71.54 REMARK 500 ARG B 64 -6.15 61.77 REMARK 500 ASN B 66 44.32 -104.24 REMARK 500 TYR B 78 31.66 71.36 REMARK 500 LYS B 157 99.65 -65.95 REMARK 500 LYS C 41 28.75 36.75 REMARK 500 SER C 63 70.74 -58.75 REMARK 500 SER C 64 82.79 33.04 REMARK 500 CYS C 65 40.72 -96.19 REMARK 500 SER C 67 118.51 -177.39 REMARK 500 GLN C 68 -153.87 -113.18 REMARK 500 LEU C 72 -27.63 98.48 REMARK 500 GLU C 94 49.24 28.53 REMARK 500 ILE C 96 -61.33 70.74 REMARK 500 PRO D 30 121.36 -39.15 REMARK 500 PRO D 35 90.40 -55.53 REMARK 500 SER D 45 -156.16 -149.23 REMARK 500 ASP D 48 -1.44 72.72 REMARK 500 TYR D 51 98.07 159.77 REMARK 500 ASN D 66 68.25 -105.70 REMARK 500 ALA D 159 85.52 -60.75 REMARK 500 HIS D 180 87.29 -153.59 REMARK 500 GLN D 181 -2.08 -156.60 REMARK 500 SER D 195 -0.26 64.81 REMARK 500 REMARK 500 REMARK: NULL DBREF 1CD9 A 2 175 UNP P09919 CSF3_HUMAN 13 186 DBREF 1CD9 B 1 215 UNP P40223 CSF3R_MOUSE 120 334 DBREF 1CD9 C 2 175 UNP P09919 CSF3_HUMAN 13 186 DBREF 1CD9 D 1 215 UNP P40223 CSF3R_MOUSE 120 334 SEQADV 1CD9 MET A 1 UNP P09919 ALA 12 CLONING ARTIFACT SEQADV 1CD9 MET C 1 UNP P09919 ALA 12 CLONING ARTIFACT SEQRES 1 A 175 MET THR PRO LEU GLY PRO ALA SER SER LEU PRO GLN SER SEQRES 2 A 175 PHE LEU LEU LYS CYS LEU GLU GLN VAL ARG LYS ILE GLN SEQRES 3 A 175 GLY ASP GLY ALA ALA LEU GLN GLU LYS LEU CYS ALA THR SEQRES 4 A 175 TYR LYS LEU CYS HIS PRO GLU GLU LEU VAL LEU LEU GLY SEQRES 5 A 175 HIS SER LEU GLY ILE PRO TRP ALA PRO LEU SER SER CYS SEQRES 6 A 175 PRO SER GLN ALA LEU GLN LEU ALA GLY CYS LEU SER GLN SEQRES 7 A 175 LEU HIS SER GLY LEU PHE LEU TYR GLN GLY LEU LEU GLN SEQRES 8 A 175 ALA LEU GLU GLY ILE SER PRO GLU LEU GLY PRO THR LEU SEQRES 9 A 175 ASP THR LEU GLN LEU ASP VAL ALA ASP PHE ALA THR THR SEQRES 10 A 175 ILE TRP GLN GLN MET GLU GLU LEU GLY MET ALA PRO ALA SEQRES 11 A 175 LEU GLN PRO THR GLN GLY ALA MET PRO ALA PHE ALA SER SEQRES 12 A 175 ALA PHE GLN ARG ARG ALA GLY GLY VAL LEU VAL ALA SER SEQRES 13 A 175 HIS LEU GLN SER PHE LEU GLU VAL SER TYR ARG VAL LEU SEQRES 14 A 175 ARG HIS LEU ALA GLN PRO SEQRES 1 B 215 ALA GLY TYR PRO PRO ALA SER PRO SER ASN LEU SER CYS SEQRES 2 B 215 LEU MET HIS LEU THR THR ASN SER LEU VAL CYS GLN TRP SEQRES 3 B 215 GLU PRO GLY PRO GLU THR HIS LEU PRO THR SER PHE ILE SEQRES 4 B 215 LEU LYS SER PHE ARG SER ARG ALA ASP CYS GLN TYR GLN SEQRES 5 B 215 GLY ASP THR ILE PRO ASP CYS VAL ALA LYS LYS ARG GLN SEQRES 6 B 215 ASN ASN CYS SER ILE PRO ARG LYS ASN LEU LEU LEU TYR SEQRES 7 B 215 GLN TYR MET ALA ILE TRP VAL GLN ALA GLU ASN MET LEU SEQRES 8 B 215 GLY SER SER GLU SER PRO LYS LEU CYS LEU ASP PRO MET SEQRES 9 B 215 ASP VAL VAL LYS LEU GLU PRO PRO MET LEU GLN ALA LEU SEQRES 10 B 215 ASP ILE GLY PRO ASP VAL VAL SER HIS GLN PRO GLY CYS SEQRES 11 B 215 LEU TRP LEU SER TRP LYS PRO TRP LYS PRO SER GLU TYR SEQRES 12 B 215 MET GLU GLN GLU CYS GLU LEU ARG TYR GLN PRO GLN LEU SEQRES 13 B 215 LYS GLY ALA ASN TRP THR LEU VAL PHE HIS LEU PRO SER SEQRES 14 B 215 SER LYS ASP GLN PHE GLU LEU CYS GLY LEU HIS GLN ALA SEQRES 15 B 215 PRO VAL TYR THR LEU GLN MET ARG CYS ILE ARG SER SER SEQRES 16 B 215 LEU PRO GLY PHE TRP SER PRO TRP SER PRO GLY LEU GLN SEQRES 17 B 215 LEU ARG PRO THR MET LYS ALA SEQRES 1 C 175 MET THR PRO LEU GLY PRO ALA SER SER LEU PRO GLN SER SEQRES 2 C 175 PHE LEU LEU LYS CYS LEU GLU GLN VAL ARG LYS ILE GLN SEQRES 3 C 175 GLY ASP GLY ALA ALA LEU GLN GLU LYS LEU CYS ALA THR SEQRES 4 C 175 TYR LYS LEU CYS HIS PRO GLU GLU LEU VAL LEU LEU GLY SEQRES 5 C 175 HIS SER LEU GLY ILE PRO TRP ALA PRO LEU SER SER CYS SEQRES 6 C 175 PRO SER GLN ALA LEU GLN LEU ALA GLY CYS LEU SER GLN SEQRES 7 C 175 LEU HIS SER GLY LEU PHE LEU TYR GLN GLY LEU LEU GLN SEQRES 8 C 175 ALA LEU GLU GLY ILE SER PRO GLU LEU GLY PRO THR LEU SEQRES 9 C 175 ASP THR LEU GLN LEU ASP VAL ALA ASP PHE ALA THR THR SEQRES 10 C 175 ILE TRP GLN GLN MET GLU GLU LEU GLY MET ALA PRO ALA SEQRES 11 C 175 LEU GLN PRO THR GLN GLY ALA MET PRO ALA PHE ALA SER SEQRES 12 C 175 ALA PHE GLN ARG ARG ALA GLY GLY VAL LEU VAL ALA SER SEQRES 13 C 175 HIS LEU GLN SER PHE LEU GLU VAL SER TYR ARG VAL LEU SEQRES 14 C 175 ARG HIS LEU ALA GLN PRO SEQRES 1 D 215 ALA GLY TYR PRO PRO ALA SER PRO SER ASN LEU SER CYS SEQRES 2 D 215 LEU MET HIS LEU THR THR ASN SER LEU VAL CYS GLN TRP SEQRES 3 D 215 GLU PRO GLY PRO GLU THR HIS LEU PRO THR SER PHE ILE SEQRES 4 D 215 LEU LYS SER PHE ARG SER ARG ALA ASP CYS GLN TYR GLN SEQRES 5 D 215 GLY ASP THR ILE PRO ASP CYS VAL ALA LYS LYS ARG GLN SEQRES 6 D 215 ASN ASN CYS SER ILE PRO ARG LYS ASN LEU LEU LEU TYR SEQRES 7 D 215 GLN TYR MET ALA ILE TRP VAL GLN ALA GLU ASN MET LEU SEQRES 8 D 215 GLY SER SER GLU SER PRO LYS LEU CYS LEU ASP PRO MET SEQRES 9 D 215 ASP VAL VAL LYS LEU GLU PRO PRO MET LEU GLN ALA LEU SEQRES 10 D 215 ASP ILE GLY PRO ASP VAL VAL SER HIS GLN PRO GLY CYS SEQRES 11 D 215 LEU TRP LEU SER TRP LYS PRO TRP LYS PRO SER GLU TYR SEQRES 12 D 215 MET GLU GLN GLU CYS GLU LEU ARG TYR GLN PRO GLN LEU SEQRES 13 D 215 LYS GLY ALA ASN TRP THR LEU VAL PHE HIS LEU PRO SER SEQRES 14 D 215 SER LYS ASP GLN PHE GLU LEU CYS GLY LEU HIS GLN ALA SEQRES 15 D 215 PRO VAL TYR THR LEU GLN MET ARG CYS ILE ARG SER SER SEQRES 16 D 215 LEU PRO GLY PHE TRP SER PRO TRP SER PRO GLY LEU GLN SEQRES 17 D 215 LEU ARG PRO THR MET LYS ALA MODRES 1CD9 ASN B 10 ASN GLYCOSYLATION SITE MODRES 1CD9 ASN D 10 ASN GLYCOSYLATION SITE HET NAG B 323 14 HET NAG D 923 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 5 NAG 2(C8 H15 N O6) FORMUL 7 HOH *260(H2 O) HELIX 1 1 PRO A 11 TYR A 40 1 30 HELIX 2 2 HIS A 44 VAL A 49 5 6 HELIX 3 3 LEU A 50 GLY A 56 1 7 HELIX 4 4 LEU A 72 LEU A 93 1 22 HELIX 5 5 LEU A 100 LEU A 125 1 26 HELIX 6 6 SER A 143 GLN A 174 1 32 HELIX 7 7 ARG B 46 GLN B 50 5 5 HELIX 8 8 LYS B 73 LEU B 75 5 3 HELIX 9 9 ASP B 102 VAL B 106 5 5 HELIX 10 10 TRP B 138 GLU B 142 5 5 HELIX 11 11 PRO C 11 LYS C 41 1 31 HELIX 12 12 HIS C 44 GLY C 56 1 13 HELIX 13 13 GLN C 71 LEU C 93 1 23 HELIX 14 14 LEU C 100 LEU C 125 1 26 HELIX 15 15 SER C 143 ALA C 173 1 31 HELIX 16 16 ARG D 46 GLN D 50 5 5 HELIX 17 17 LYS D 73 LEU D 75 5 3 HELIX 18 18 ASP D 102 VAL D 106 5 5 HELIX 19 19 TRP D 138 GLU D 142 5 5 SHEET 1 A 3 SER B 9 HIS B 16 0 SHEET 2 A 3 SER B 21 GLU B 27 -1 O SER B 21 N HIS B 16 SHEET 3 A 3 ASN B 67 PRO B 71 -1 O CYS B 68 N CYS B 24 SHEET 1 B 4 THR B 55 VAL B 60 0 SHEET 2 B 4 SER B 37 ARG B 44 -1 N LEU B 40 O CYS B 59 SHEET 3 B 4 MET B 81 ASN B 89 -1 N ALA B 82 O PHE B 43 SHEET 4 B 4 GLY B 92 GLU B 95 -1 N GLY B 92 O ASN B 89 SHEET 1 C 4 THR B 55 VAL B 60 0 SHEET 2 C 4 SER B 37 ARG B 44 -1 N LEU B 40 O CYS B 59 SHEET 3 C 4 MET B 81 ASN B 89 -1 N ALA B 82 O PHE B 43 SHEET 4 C 4 LEU B 99 LEU B 101 -1 N LEU B 99 O ILE B 83 SHEET 1 D 3 MET B 113 LEU B 117 0 SHEET 2 D 3 LEU B 131 LYS B 136 -1 O TRP B 132 N LEU B 117 SHEET 3 D 3 LYS B 171 LEU B 176 -1 N LYS B 171 O TRP B 135 SHEET 1 E 4 THR B 162 PRO B 168 0 SHEET 2 E 4 GLN B 146 PRO B 154 -1 O CYS B 148 N LEU B 167 SHEET 3 E 4 TYR B 185 ARG B 193 -1 N THR B 186 O GLN B 153 SHEET 4 E 4 LEU B 207 LEU B 209 -1 N LEU B 207 O LEU B 187 SHEET 1 F 3 SER D 9 HIS D 16 0 SHEET 2 F 3 SER D 21 GLU D 27 -1 O SER D 21 N HIS D 16 SHEET 3 F 3 ILE D 70 PRO D 71 -1 N ILE D 70 O LEU D 22 SHEET 1 G 4 THR D 55 VAL D 60 0 SHEET 2 G 4 PHE D 38 ARG D 44 -1 N LEU D 40 O CYS D 59 SHEET 3 G 4 MET D 81 ASN D 89 -1 N ALA D 82 O PHE D 43 SHEET 4 G 4 GLY D 92 GLU D 95 -1 O GLY D 92 N ASN D 89 SHEET 1 H 4 THR D 55 VAL D 60 0 SHEET 2 H 4 PHE D 38 ARG D 44 -1 N LEU D 40 O CYS D 59 SHEET 3 H 4 MET D 81 ASN D 89 -1 N ALA D 82 O PHE D 43 SHEET 4 H 4 LEU D 99 LEU D 101 -1 N LEU D 99 O ILE D 83 SHEET 1 I 3 MET D 113 ALA D 116 0 SHEET 2 I 3 CYS D 130 LYS D 136 -1 O SER D 134 N GLN D 115 SHEET 3 I 3 LYS D 171 CYS D 177 -1 N LYS D 171 O TRP D 135 SHEET 1 J 3 THR D 162 PRO D 168 0 SHEET 2 J 3 GLN D 146 PRO D 154 -1 N CYS D 148 O LEU D 167 SHEET 3 J 3 TYR D 185 ARG D 193 -1 N THR D 186 O GLN D 153 SSBOND 1 CYS A 37 CYS A 43 1555 1555 2.04 SSBOND 2 CYS A 65 CYS A 75 1555 1555 2.06 SSBOND 3 CYS B 13 CYS B 24 1555 1555 2.03 SSBOND 4 CYS B 49 CYS B 100 1555 1555 2.04 SSBOND 5 CYS B 59 CYS B 68 1555 1555 2.05 SSBOND 6 CYS B 130 CYS B 177 1555 1555 2.06 SSBOND 7 CYS B 148 CYS B 191 1555 1555 2.05 SSBOND 8 CYS C 37 CYS C 43 1555 1555 2.05 SSBOND 9 CYS C 65 CYS C 75 1555 1555 2.05 SSBOND 10 CYS D 13 CYS D 24 1555 1555 2.04 SSBOND 11 CYS D 49 CYS D 100 1555 1555 2.04 SSBOND 12 CYS D 59 CYS D 68 1555 1555 2.04 SSBOND 13 CYS D 130 CYS D 177 1555 1555 2.03 SSBOND 14 CYS D 148 CYS D 191 1555 1555 2.04 LINK ND2 ASN B 10 C1 NAG B 323 1555 1555 1.48 LINK ND2 ASN D 10 C1 NAG D 923 1555 1555 1.46 CRYST1 125.467 125.467 372.771 90.00 90.00 90.00 I 41 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007970 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007970 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002683 0.00000 MTRIX1 1 0.786910 0.611410 0.083360 -22.31002 1 MTRIX2 1 0.613010 -0.790040 0.007790 32.99520 1 MTRIX3 1 0.070620 0.044970 -0.996490 251.97295 1 MTRIX1 2 0.863480 0.480970 0.151900 -31.65583 1 MTRIX2 2 0.481780 -0.875640 0.033900 38.74764 1 MTRIX3 2 0.149310 0.043910 -0.987810 247.10971 1