PDB Short entry for 1DCR
HEADER    DNA                                     05-NOV-99   1DCR              
TITLE     CRYSTAL STRUCTURE OF DNA SHEARED TANDEM G-A BASE PAIRS                
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: 5'-D(*CP*CP*GP*AP*AP*(BRU)P*GP*AP*GP*G)-3';                
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 SYNTHETIC: YES                                                       
KEYWDS    TANDEM GA BASE PAIRS, GA MISMATCH, DEOXYRIBONUCLEIC ACID, DNA         
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    Y.-G.GAO,H.ROBINSON,R.SANISHVILI,A.JOACHIMIAK,A.H.-J.WANG             
REVDAT   6   09-AUG-23 1DCR    1       REMARK LINK                              
REVDAT   5   04-OCT-17 1DCR    1       REMARK                                   
REVDAT   4   24-FEB-09 1DCR    1       VERSN                                    
REVDAT   3   01-APR-03 1DCR    1       JRNL                                     
REVDAT   2   01-JAN-00 1DCR    1       JRNL                                     
REVDAT   1   19-NOV-99 1DCR    0                                                
JRNL        AUTH   Y.G.GAO,H.ROBINSON,R.SANISHVILI,A.JOACHIMIAK,A.H.WANG        
JRNL        TITL   STRUCTURE AND RECOGNITION OF SHEARED TANDEM G X A BASE PAIRS 
JRNL        TITL 2 ASSOCIATED WITH HUMAN CENTROMERE DNA SEQUENCE AT ATOMIC      
JRNL        TITL 3 RESOLUTION.                                                  
JRNL        REF    BIOCHEMISTRY                  V.  38 16452 1999              
JRNL        REFN                   ISSN 0006-2960                               
JRNL        PMID   10600106                                                     
JRNL        DOI    10.1021/BI9914614                                            
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.60 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : SHELXL-97                                            
REMARK   3   AUTHORS     : G.M.SHELDRICK                                        
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 20.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 98.4                           
REMARK   3   CROSS-VALIDATION METHOD           : THROUGHOUT                     
REMARK   3   FREE R VALUE TEST SET SELECTION   : RANDOM                         
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (NO CUTOFF).                         
REMARK   3   R VALUE   (WORKING + TEST SET, NO CUTOFF) : 0.196                  
REMARK   3   R VALUE          (WORKING SET, NO CUTOFF) : 0.191                  
REMARK   3   FREE R VALUE                  (NO CUTOFF) : 0.266                  
REMARK   3   FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.000                  
REMARK   3   FREE R VALUE TEST SET COUNT   (NO CUTOFF) : 291                    
REMARK   3   TOTAL NUMBER OF REFLECTIONS   (NO CUTOFF) : 5771                   
REMARK   3                                                                      
REMARK   3  FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F).                     
REMARK   3   R VALUE   (WORKING + TEST SET, F>4SIG(F)) : 0.192                  
REMARK   3   R VALUE          (WORKING SET, F>4SIG(F)) : 0.187                  
REMARK   3   FREE R VALUE                  (F>4SIG(F)) : 0.261                  
REMARK   3   FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 5.000                  
REMARK   3   FREE R VALUE TEST SET COUNT   (F>4SIG(F)) : 278                    
REMARK   3   TOTAL NUMBER OF REFLECTIONS   (F>4SIG(F)) : 5409                   
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS      : 0                                             
REMARK   3   NUCLEIC ACID ATOMS : 412                                           
REMARK   3   HETEROGEN ATOMS    : 18                                            
REMARK   3   SOLVENT ATOMS      : 87                                            
REMARK   3                                                                      
REMARK   3  MODEL REFINEMENT.                                                   
REMARK   3   OCCUPANCY SUM OF NON-HYDROGEN ATOMS      : NULL                    
REMARK   3   OCCUPANCY SUM OF HYDROGEN ATOMS          : NULL                    
REMARK   3   NUMBER OF DISCRETELY DISORDERED RESIDUES : NULL                    
REMARK   3   NUMBER OF LEAST-SQUARES PARAMETERS       : 2055                    
REMARK   3   NUMBER OF RESTRAINTS                     : 1837                    
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM RESTRAINT TARGET VALUES.                        
REMARK   3   BOND LENGTHS                         (A) : 0.009                   
REMARK   3   ANGLE DISTANCES                      (A) : 0.025                   
REMARK   3   SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL                    
REMARK   3   DISTANCES FROM RESTRAINT PLANES      (A) : 0.067                   
REMARK   3   ZERO CHIRAL VOLUMES               (A**3) : NULL                    
REMARK   3   NON-ZERO CHIRAL VOLUMES           (A**3) : NULL                    
REMARK   3   ANTI-BUMPING DISTANCE RESTRAINTS     (A) : 0.072                   
REMARK   3   RIGID-BOND ADP COMPONENTS         (A**2) : NULL                    
REMARK   3   SIMILAR ADP COMPONENTS            (A**2) : 0.066                   
REMARK   3   APPROXIMATELY ISOTROPIC ADPS      (A**2) : NULL                    
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED: SHELX-97 OPTIONS SWAT                                 
REMARK   3                                                                      
REMARK   3  STEREOCHEMISTRY TARGET VALUES : PARKINSON ET AL.                    
REMARK   3   SPECIAL CASE: NULL                                                 
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: SHELX-97 OPTIONS HOPE                     
REMARK   4                                                                      
REMARK   4 1DCR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-NOV-99.                  
REMARK 100 THE DEPOSITION ID IS D_1000009974.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 17-JUN-96                          
REMARK 200  TEMPERATURE           (KELVIN) : 298                                
REMARK 200  PH                             : 7.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : ROTATING ANODE                     
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : RIGAKU RU200                       
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.5418                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : IMAGE PLATE                        
REMARK 200  DETECTOR MANUFACTURER          : RIGAKU RAXIS IIC                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : R-AXIS                             
REMARK 200  DATA SCALING SOFTWARE          : D*TREK                             
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 5771                               
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.600                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 20.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 94.8                               
REMARK 200  DATA REDUNDANCY                : 2.610                              
REMARK 200  R MERGE                    (I) : 0.07500                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 19.2000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.66                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 93.7                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 2.10                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.44500                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 3.800                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: X-PLOR                                                
REMARK 200 STARTING MODEL: PDB STRUCTURE 1D9R                                   
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 29.96                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.76                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: MPD, MGCL2, TRIS, SPERMINE, PH 7.5,      
REMARK 280  VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K                     
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,-Y,Z+1/2                                             
REMARK 290       3555   -X,Y,-Z+1/2                                             
REMARK 290       4555   X,-Y,-Z                                                 
REMARK 290       5555   X+1/2,Y+1/2,Z                                           
REMARK 290       6555   -X+1/2,-Y+1/2,Z+1/2                                     
REMARK 290       7555   -X+1/2,Y+1/2,-Z+1/2                                     
REMARK 290       8555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       34.24500            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       34.24500            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   5  1.000000  0.000000  0.000000       10.47500            
REMARK 290   SMTRY2   5  0.000000  1.000000  0.000000       30.93000            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   6 -1.000000  0.000000  0.000000       10.47500            
REMARK 290   SMTRY2   6  0.000000 -1.000000  0.000000       30.93000            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000       34.24500            
REMARK 290   SMTRY1   7 -1.000000  0.000000  0.000000       10.47500            
REMARK 290   SMTRY2   7  0.000000  1.000000  0.000000       30.93000            
REMARK 290   SMTRY3   7  0.000000  0.000000 -1.000000       34.24500            
REMARK 290   SMTRY1   8  1.000000  0.000000  0.000000       10.47500            
REMARK 290   SMTRY2   8  0.000000 -1.000000  0.000000       30.93000            
REMARK 290   SMTRY3   8  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375 MG    MG B  23  LIES ON A SPECIAL POSITION.                          
REMARK 375      HOH A1042  LIES ON A SPECIAL POSITION.                          
REMARK 375      HOH B1024  LIES ON A SPECIAL POSITION.                          
REMARK 375      HOH B1070  LIES ON A SPECIAL POSITION.                          
REMARK 375      HOH B1090  LIES ON A SPECIAL POSITION.                          
REMARK 375      HOH B1091  LIES ON A SPECIAL POSITION.                          
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    BRU A   6   C3' -  O3' -  P   ANGL. DEV. =  11.6 DEGREES          
REMARK 500     DG A   7   O5' -  P   -  OP2 ANGL. DEV. =  -6.9 DEGREES          
REMARK 500     DG A   7   O4' -  C1' -  N9  ANGL. DEV. =  -4.4 DEGREES          
REMARK 500     DG A   9   O4' -  C1' -  N9  ANGL. DEV. =   4.5 DEGREES          
REMARK 500     DC B  11   O4' -  C1' -  N1  ANGL. DEV. =   6.4 DEGREES          
REMARK 500     DA B  14   O4' -  C1' -  N9  ANGL. DEV. =   4.0 DEGREES          
REMARK 500     DA B  15   C5  -  C6  -  N1  ANGL. DEV. =   3.0 DEGREES          
REMARK 500     DA B  18   N1  -  C2  -  N3  ANGL. DEV. =  -5.2 DEGREES          
REMARK 500     DA B  18   N1  -  C6  -  N6  ANGL. DEV. =   4.9 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500     DA A   8         0.09    SIDE CHAIN                              
REMARK 500     DC B  11         0.09    SIDE CHAIN                              
REMARK 500     DA B  14         0.07    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MG A  22  MG                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1  DG A   9   N7                                                     
REMARK 620 2 HOH A1083   O    87.2                                              
REMARK 620 3 HOH A1084   O    94.5 178.0                                        
REMARK 620 4 HOH A1085   O    84.6  90.1  90.9                                  
REMARK 620 5 HOH A1086   O   172.8  89.7  88.7  88.9                            
REMARK 620 6 HOH A1087   O    97.0  90.4  88.5 178.3  89.5                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MG A  21  MG                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1  DG A  10   OP1                                                    
REMARK 620 2 HOH A1078   O    93.5                                              
REMARK 620 3 HOH A1079   O    85.2 178.4                                        
REMARK 620 4 HOH A1080   O    91.8  88.4  90.6                                  
REMARK 620 5 HOH A1081   O   175.7  90.8  90.6  88.8                            
REMARK 620 6 HOH A1082   O    89.6  90.9  90.1 178.5  89.8                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              NA B  25  NA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 BRU B  16   OP1                                                    
REMARK 620 2 BRU B  16   O5'  35.5                                              
REMARK 620 3 BRU B  16   OP2  33.3  62.1                                        
REMARK 620 4 HOH B1014   O   140.1 126.9 156.8                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MG B  23  MG                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1  DG B  20   OP1                                                    
REMARK 620 2  DG B  20   OP1 175.6                                              
REMARK 620 3 HOH B1088   O    99.4  80.6                                        
REMARK 620 4 HOH B1088   O    80.6  99.4 179.6                                  
REMARK 620 5 HOH B1089   O    80.6  99.4 179.6   0.0                            
REMARK 620 6 HOH B1089   O    99.4  80.6   0.0 179.6 179.6                      
REMARK 620 7 HOH B1090   O    92.2  92.2  90.2  90.2  90.2  90.2                
REMARK 620 8 HOH B1090   O    92.2  92.2  90.2  90.2  90.2  90.2   0.0          
REMARK 620 9 HOH B1091   O    87.8  87.8  89.8  89.8  89.8  89.8 180.0 180.0    
REMARK 620 N                    1     2     3     4     5     6     7     8     
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SPM A 24                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 25                   
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 21                   
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 22                   
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 23                   
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1D9R   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 1D8X   RELATED DB: PDB                                   
DBREF  1DCR A    1    10  PDB    1DCR     1DCR             1     10             
DBREF  1DCR B   11    20  PDB    1DCR     1DCR            11     20             
SEQRES   1 A   10   DC  DC  DG  DA  DA BRU  DG  DA  DG  DG                      
SEQRES   1 B   10   DC  DC  DG  DA  DA BRU  DG  DA  DG  DG                      
MODRES 1DCR BRU A    6   DU                                                     
MODRES 1DCR BRU B   16   DU                                                     
HET    BRU  A   6      20                                                       
HET    BRU  B  16      20                                                       
HET    SPM  A  24      14                                                       
HET     MG  A  21       1                                                       
HET     MG  A  22       1                                                       
HET     NA  B  25       1                                                       
HET     MG  B  23       1                                                       
HETNAM     BRU 5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE                         
HETNAM     SPM SPERMINE                                                         
HETNAM      MG MAGNESIUM ION                                                    
HETNAM      NA SODIUM ION                                                       
FORMUL   1  BRU    2(C9 H12 BR N2 O8 P)                                         
FORMUL   3  SPM    C10 H26 N4                                                   
FORMUL   4   MG    3(MG 2+)                                                     
FORMUL   6   NA    NA 1+                                                        
FORMUL   8  HOH   *87(H2 O)                                                     
LINK         O3'  DA A   5                 P   BRU A   6     1555   1555  1.61  
LINK         O3' BRU A   6                 P    DG A   7     1555   1555  1.58  
LINK         O3'  DA B  15                 P   BRU B  16     1555   1555  1.62  
LINK         O3' BRU B  16                 P    DG B  17     1555   1555  1.60  
LINK         N7   DG A   9                MG    MG A  22     1555   1555  2.31  
LINK         OP1  DG A  10                MG    MG A  21     1555   1555  2.12  
LINK        MG    MG A  21                 O   HOH A1078     1555   1555  2.06  
LINK        MG    MG A  21                 O   HOH A1079     1555   1555  2.06  
LINK        MG    MG A  21                 O   HOH A1080     1555   1555  2.07  
LINK        MG    MG A  21                 O   HOH A1081     1555   1555  2.06  
LINK        MG    MG A  21                 O   HOH A1082     1555   1555  2.06  
LINK        MG    MG A  22                 O   HOH A1083     1555   1555  2.06  
LINK        MG    MG A  22                 O   HOH A1084     1555   1555  2.07  
LINK        MG    MG A  22                 O   HOH A1085     1555   1555  2.07  
LINK        MG    MG A  22                 O   HOH A1086     1555   1555  2.07  
LINK        MG    MG A  22                 O   HOH A1087     1555   1555  2.06  
LINK         OP1 BRU B  16                NA    NA B  25     1555   1555  4.10  
LINK         O5' BRU B  16                NA    NA B  25     1555   1555  2.54  
LINK         OP2 BRU B  16                NA    NA B  25     1555   1555  2.10  
LINK         OP1  DG B  20                MG    MG B  23     1555   1555  2.03  
LINK         OP1  DG B  20                MG    MG B  23     3555   1555  2.03  
LINK        MG    MG B  23                 O   HOH B1088     1555   1555  2.06  
LINK        MG    MG B  23                 O   HOH B1088     1555   3555  2.06  
LINK        MG    MG B  23                 O   HOH B1089     1555   1555  2.06  
LINK        MG    MG B  23                 O   HOH B1089     1555   3555  2.06  
LINK        MG    MG B  23                 O   HOH B1090     1555   1555  2.06  
LINK        MG    MG B  23                 O   HOH B1090     1555   3555  2.06  
LINK        MG    MG B  23                 O   HOH B1091     1555   1555  2.06  
LINK        MG    MG B  23                 O   HOH B1091     1555   3555  2.06  
LINK        NA    NA B  25                 O   HOH B1014     1555   1555  2.91  
SITE     1 AC1  5  DG A   7  HOH A1069   DC B  12   DG B  13                    
SITE     2 AC1  5 HOH B1056                                                     
SITE     1 AC2  3  DA B  15  BRU B  16  HOH B1014                               
SITE     1 AC3  6  DG A  10  HOH A1078  HOH A1079  HOH A1080                    
SITE     2 AC3  6 HOH A1081  HOH A1082                                          
SITE     1 AC4  6  DG A   9  HOH A1083  HOH A1084  HOH A1085                    
SITE     2 AC4  6 HOH A1086  HOH A1087                                          
SITE     1 AC5  5  DG B  20  HOH B1088  HOH B1089  HOH B1090                    
SITE     2 AC5  5 HOH B1091                                                     
CRYST1   20.950   61.860   68.490  90.00  90.00  90.00 C 2 2 21     16          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.047733  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.016166  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.014601        0.00000