PDB Short entry for 1DF0 HEADER HYDROLASE 16-NOV-99 1DF0 TITLE CRYSTAL STRUCTURE OF M-CALPAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: M-CALPAIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: LARGE (CATALYTIC) SUBUNIT; COMPND 5 SYNONYM: CALCIUM-ACTIVATED NEUTRAL PROTEINASE, CALPAIN 2; COMPND 6 EC: 3.4.22.53; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: CALPAIN; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: DOMAIN VI (CALCIUM-BINDING DOMAIN), SMALL (REGULATORY) COMPND 13 SUBUNIT; COMPND 14 SYNONYM: CALCIUM-ACTIVATED NEUTRAL PROTEINASE; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 9 ORGANISM_COMMON: NORWAY RAT; SOURCE 10 ORGANISM_TAXID: 10116; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CYSTEINE PROTEASE, CALMODULIN, PAPAIN, CATALYTIC TRIAD, ZYMOGEN KEYWDS 2 ACTIVATION, C2 DOMAIN, PROTEASE, ZYMOGEN, CALPAIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.M.HOSFIELD,J.S.ELCE,P.L.DAVIES,Z.JIA REVDAT 7 03-NOV-21 1DF0 1 SEQADV REVDAT 6 31-JAN-18 1DF0 1 REMARK REVDAT 5 09-MAY-12 1DF0 1 COMPND VERSN REVDAT 4 24-FEB-09 1DF0 1 VERSN REVDAT 3 01-APR-03 1DF0 1 JRNL REVDAT 2 26-NOV-01 1DF0 1 SOURCE JRNL REMARK REVDAT 1 21-JUN-00 1DF0 0 JRNL AUTH C.M.HOSFIELD,J.S.ELCE,P.L.DAVIES,Z.JIA JRNL TITL CRYSTAL STRUCTURE OF CALPAIN REVEALS THE STRUCTURAL BASIS JRNL TITL 2 FOR CA(2+)-DEPENDENT PROTEASE ACTIVITY AND A NOVEL MODE OF JRNL TITL 3 ENZYME ACTIVATION. JRNL REF EMBO J. V. 18 6880 1999 JRNL REFN ISSN 0261-4189 JRNL PMID 10601010 JRNL DOI 10.1093/EMBOJ/18.24.6880 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.BLANCHARD,P.GROCHULSKI,Y.LI,J.S.C.ARTHUR,P.L.DAVIES, REMARK 1 AUTH 2 J.S.ELCE,M.CYGLER REMARK 1 TITL STRUCTURE OF A CALPAIN CA(2+)-BINDING DOMAIN REVEALS A NOVEL REMARK 1 TITL 2 EF-HAND AND CA(2+) -INDUCED CONFORMATIONAL CHANGES REMARK 1 REF NAT.STRUCT.BIOL. V. 4 532 1997 REMARK 1 REFN ISSN 1072-8368 REMARK 1 REFERENCE 2 REMARK 1 AUTH G.D.LIN,D.CHATTOPADHYAY,M.MAKI,K.K.WANG,M.CARSON,L.JIN, REMARK 1 AUTH 2 M.HATANAKA,E.TAKANO,S.V.NARAYANA REMARK 1 TITL CRYSTAL STRUCTURE OF CALCIUM BOUND DOMAIN VI OF CALPAIN AT REMARK 1 TITL 2 1.9 A RESOLUTION AND ITS ROLE IN ENZYME ASSEMBLY, REMARK 1 TITL 3 REGULATION, AND INHIBITOR BINDING REMARK 1 REF NAT.STRUCT.BIOL. V. 4 539 1997 REMARK 1 REFN ISSN 1072-8368 REMARK 1 REFERENCE 3 REMARK 1 AUTH C.M.HOSFIELD,Q.YE,J.S.C.ARTHUR,C.HEGADORN,D.E.CROALL, REMARK 1 AUTH 2 J.S.ELCE,Z.JIA REMARK 1 TITL CRYSTALLIZATION AND X-RAY CRYSTALLOGRAPHIC ANALYSIS OF REMARK 1 TITL 2 M-CALPAIN: A CA2+- DEPENDENT PROTEASE REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 55 1484 1999 REMARK 1 REFN ISSN 0907-4449 REMARK 1 DOI 10.1107/S0907444999007386 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 34794 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.293 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 3454 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6391 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 358 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 68.05 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1DF0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-NOV-99. REMARK 100 THE DEPOSITION ID IS D_1000010027. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-AUG-98 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.25 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.923 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 227921 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.04100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.91 REMARK 200 R MERGE FOR SHELL (I) : 0.11000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6000, MES, SODIUM CHLORIDE, REMARK 280 DITHIOTHREITOL, EDTA, PH 6.25, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A HETERODIMER CONSTRUCTED FROM REMARK 300 CHAIN A AND CHAIN B REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 245 REMARK 465 SER A 246 REMARK 465 ALA A 247 REMARK 465 ALA A 248 REMARK 465 ASP A 249 REMARK 465 SER A 250 REMARK 465 GLU A 251 REMARK 465 ALA A 252 REMARK 465 VAL A 253 REMARK 465 THR A 254 REMARK 465 TYR A 255 REMARK 465 GLN A 256 REMARK 465 LYS A 257 REMARK 465 LEU A 258 REMARK 465 VAL A 259 REMARK 465 LYS A 260 REMARK 465 GLU A 273 REMARK 465 SER A 274 REMARK 465 SER A 275 REMARK 465 GLY A 276 REMARK 465 SER A 277 REMARK 465 LEU A 278 REMARK 465 VAL A 291 REMARK 465 GLU A 292 REMARK 465 TRP A 293 REMARK 465 THR A 294 REMARK 465 GLY A 295 REMARK 465 LYS A 296 REMARK 465 TRP A 297 REMARK 465 ASN A 298 REMARK 465 ASP A 299 REMARK 465 ASN A 300 REMARK 465 CYS A 301 REMARK 465 PRO A 302 REMARK 465 SER A 303 REMARK 465 TRP A 304 REMARK 465 ASN A 305 REMARK 465 THR A 306 REMARK 465 VAL A 307 REMARK 465 ASP A 308 REMARK 465 PRO A 309 REMARK 465 GLU A 310 REMARK 465 VAL A 311 REMARK 465 ARG A 312 REMARK 465 ALA A 313 REMARK 465 ASN A 314 REMARK 465 LEU A 315 REMARK 465 THR A 316 REMARK 465 GLU A 317 REMARK 465 ARG A 318 REMARK 465 GLN A 319 REMARK 465 GLU A 320 REMARK 465 ASP A 321 REMARK 465 GLU A 402 REMARK 465 PRO A 437 REMARK 465 GLU A 438 REMARK 465 GLU A 439 REMARK 465 LEU A 440 REMARK 465 THR A 441 REMARK 465 GLY A 442 REMARK 465 GLN A 443 REMARK 465 THR A 444 REMARK 465 ASN A 445 REMARK 465 ILE A 446 REMARK 465 HIS A 447 REMARK 465 LEU A 448 REMARK 465 THR A 456 REMARK 465 ARG A 457 REMARK 465 ALA A 458 REMARK 465 ARG A 459 REMARK 465 GLU A 524 REMARK 465 ARG A 564 REMARK 465 GLU A 565 REMARK 465 ASP A 566 REMARK 465 ILE A 567 REMARK 465 MET B 1 REMARK 465 HIS B 2 REMARK 465 TYR B 3 REMARK 465 SER B 4 REMARK 465 ASN B 5 REMARK 465 ILE B 6 REMARK 465 GLU B 7 REMARK 465 ALA B 8 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 244 CG1 CG2 CD1 REMARK 470 VAL A 272 CG1 CG2 REMARK 470 GLN A 279 CG CD OE1 NE2 REMARK 470 GLN A 290 CG CD OE1 NE2 REMARK 470 ARG A 403 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 452 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE A 453 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU A 454 CG CD1 CD2 REMARK 470 GLU A 460 CG CD OE1 OE2 REMARK 470 ARG A 461 CG CD NE CZ NH1 NH2 REMARK 470 SER A 462 OG REMARK 470 ASN A 526 CG OD1 ND2 REMARK 470 GLU A 527 CG CD OE1 OE2 REMARK 470 GLU A 528 CG CD OE1 OE2 REMARK 470 ASP A 529 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 912 O HOH A 999 2.09 REMARK 500 O GLU A 233 O TYR A 353 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 373 N - CA - C ANGL. DEV. = 16.1 DEGREES REMARK 500 ASP A 529 N - CA - C ANGL. DEV. = -17.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 15 -7.81 -58.43 REMARK 500 LEU A 58 -63.92 -91.60 REMARK 500 PHE A 60 -8.65 -150.70 REMARK 500 LYS A 61 -76.67 -138.42 REMARK 500 TYR A 66 -22.97 74.75 REMARK 500 SER A 68 21.69 -75.52 REMARK 500 ASP A 84 44.38 163.24 REMARK 500 ARG A 123 -35.53 -37.75 REMARK 500 GLN A 132 -72.14 -103.76 REMARK 500 GLU A 133 -124.92 -43.54 REMARK 500 ASN A 134 38.55 -73.91 REMARK 500 ALA A 136 19.94 -160.98 REMARK 500 ASP A 162 52.96 79.03 REMARK 500 PHE A 167 -132.47 -137.52 REMARK 500 GLU A 172 10.73 -69.57 REMARK 500 ILE A 188 -7.49 -48.17 REMARK 500 LYS A 219 71.99 -153.24 REMARK 500 PRO A 222 -175.37 -68.32 REMARK 500 ASN A 223 33.82 24.95 REMARK 500 GLU A 323 -155.55 -119.20 REMARK 500 PHE A 324 153.71 164.86 REMARK 500 ASP A 351 126.41 -37.60 REMARK 500 SER A 352 104.05 37.81 REMARK 500 LYS A 354 113.21 51.39 REMARK 500 SER A 369 -55.07 -135.06 REMARK 500 CYS A 374 118.11 95.40 REMARK 500 ASN A 376 -15.84 -39.29 REMARK 500 ASN A 384 171.14 -56.48 REMARK 500 GLU A 392 -103.25 -108.21 REMARK 500 ASP A 398 -61.62 -179.12 REMARK 500 GLU A 399 -73.16 -154.90 REMARK 500 ASP A 425 51.99 34.39 REMARK 500 PHE A 453 8.23 -51.96 REMARK 500 LEU A 454 57.05 -99.30 REMARK 500 ARG A 461 -74.38 160.08 REMARK 500 SER A 462 -151.05 37.09 REMARK 500 ASP A 463 -158.94 68.65 REMARK 500 THR A 464 84.98 56.49 REMARK 500 GLN A 510 138.58 -171.67 REMARK 500 ALA A 525 65.16 -117.65 REMARK 500 ASN A 526 -87.02 -15.35 REMARK 500 GLU A 527 -170.61 61.14 REMARK 500 GLU A 528 -168.42 -57.25 REMARK 500 ASP A 529 -150.68 84.36 REMARK 500 ILE A 530 112.31 64.29 REMARK 500 GLN A 540 20.86 -76.42 REMARK 500 LEU A 541 -25.52 -142.91 REMARK 500 ASP A 570 65.84 -107.88 REMARK 500 ASP A 585 -87.41 -58.93 REMARK 500 GLU A 586 -17.17 66.05 REMARK 500 REMARK 500 THIS ENTRY HAS 59 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 PHE B 156 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1AJ5 RELATED DB: PDB REMARK 900 HOMODIMERIC STRUCTURE OF THE REGULATORY SUBUNIT IN THE ABSENCE OF REMARK 900 CA2+ REMARK 900 RELATED ID: 1ALV RELATED DB: PDB REMARK 900 HOMODIMERIC STRUCTURE OF THE REGULATORY SUBUNIT WITH CA2+ BOUND REMARK 900 RELATED ID: 1ALW RELATED DB: PDB REMARK 900 HOMODIMERIC STRUCTURE OF THE REGULATORY SUBUNIT WITH BOUND CA2+ AND REMARK 900 INHIBITOR REMARK 900 RELATED ID: 1DVI RELATED DB: PDB REMARK 900 HOMODIMERIC STRUCTURE OF THE REGULATORY SUBUNIT WITH CA2+ BOUND DBREF 1DF0 A 1 700 UNP Q07009 CAN2_RAT 1 700 DBREF 1DF0 B 1 184 UNP Q64537 CANS_RAT 1 184 SEQADV 1DF0 SER A 105 UNP Q07009 CYS 105 ENGINEERED MUTATION SEQRES 1 A 700 MET ALA GLY ILE ALA MET LYS LEU ALA LYS ASP ARG GLU SEQRES 2 A 700 ALA ALA GLU GLY LEU GLY SER HIS GLU ARG ALA ILE LYS SEQRES 3 A 700 TYR LEU ASN GLN ASP TYR GLU THR LEU ARG ASN GLU CYS SEQRES 4 A 700 LEU GLU ALA GLY ALA LEU PHE GLN ASP PRO SER PHE PRO SEQRES 5 A 700 ALA LEU PRO SER SER LEU GLY PHE LYS GLU LEU GLY PRO SEQRES 6 A 700 TYR SER SER LYS THR ARG GLY ILE GLU TRP LYS ARG PRO SEQRES 7 A 700 THR GLU ILE CYS ALA ASP PRO GLN PHE ILE ILE GLY GLY SEQRES 8 A 700 ALA THR ARG THR ASP ILE CYS GLN GLY ALA LEU GLY ASP SEQRES 9 A 700 SER TRP LEU LEU ALA ALA ILE ALA SER LEU THR LEU ASN SEQRES 10 A 700 GLU GLU ILE LEU ALA ARG VAL VAL PRO LEU ASP GLN SER SEQRES 11 A 700 PHE GLN GLU ASN TYR ALA GLY ILE PHE HIS PHE GLN PHE SEQRES 12 A 700 TRP GLN TYR GLY GLU TRP VAL GLU VAL VAL VAL ASP ASP SEQRES 13 A 700 ARG LEU PRO THR LYS ASP GLY GLU LEU LEU PHE VAL HIS SEQRES 14 A 700 SER ALA GLU GLY SER GLU PHE TRP SER ALA LEU LEU GLU SEQRES 15 A 700 LYS ALA TYR ALA LYS ILE ASN GLY CYS TYR GLU ALA LEU SEQRES 16 A 700 SER GLY GLY ALA THR THR GLU GLY PHE GLU ASP PHE THR SEQRES 17 A 700 GLY GLY ILE ALA GLU TRP TYR GLU LEU ARG LYS PRO PRO SEQRES 18 A 700 PRO ASN LEU PHE LYS ILE ILE GLN LYS ALA LEU GLU LYS SEQRES 19 A 700 GLY SER LEU LEU GLY CYS SER ILE ASP ILE THR SER ALA SEQRES 20 A 700 ALA ASP SER GLU ALA VAL THR TYR GLN LYS LEU VAL LYS SEQRES 21 A 700 GLY HIS ALA TYR SER VAL THR GLY ALA GLU GLU VAL GLU SEQRES 22 A 700 SER SER GLY SER LEU GLN LYS LEU ILE ARG ILE ARG ASN SEQRES 23 A 700 PRO TRP GLY GLN VAL GLU TRP THR GLY LYS TRP ASN ASP SEQRES 24 A 700 ASN CYS PRO SER TRP ASN THR VAL ASP PRO GLU VAL ARG SEQRES 25 A 700 ALA ASN LEU THR GLU ARG GLN GLU ASP GLY GLU PHE TRP SEQRES 26 A 700 MET SER PHE SER ASP PHE LEU ARG HIS TYR SER ARG LEU SEQRES 27 A 700 GLU ILE CYS ASN LEU THR PRO ASP THR LEU THR CYS ASP SEQRES 28 A 700 SER TYR LYS LYS TRP LYS LEU THR LYS MET ASP GLY ASN SEQRES 29 A 700 TRP ARG ARG GLY SER THR ALA GLY GLY CYS ARG ASN TYR SEQRES 30 A 700 PRO ASN THR PHE TRP MET ASN PRO GLN TYR LEU ILE LYS SEQRES 31 A 700 LEU GLU GLU GLU ASP GLU ASP ASP GLU ASP GLY GLU ARG SEQRES 32 A 700 GLY CYS THR PHE LEU VAL GLY LEU ILE GLN LYS HIS ARG SEQRES 33 A 700 ARG ARG GLN ARG LYS MET GLY GLU ASP MET HIS THR ILE SEQRES 34 A 700 GLY PHE GLY ILE TYR GLU VAL PRO GLU GLU LEU THR GLY SEQRES 35 A 700 GLN THR ASN ILE HIS LEU SER LYS ASN PHE PHE LEU THR SEQRES 36 A 700 THR ARG ALA ARG GLU ARG SER ASP THR PHE ILE ASN LEU SEQRES 37 A 700 ARG GLU VAL LEU ASN ARG PHE LYS LEU PRO PRO GLY GLU SEQRES 38 A 700 TYR VAL LEU VAL PRO SER THR PHE GLU PRO HIS LYS ASN SEQRES 39 A 700 GLY ASP PHE CYS ILE ARG VAL PHE SER GLU LYS LYS ALA SEQRES 40 A 700 ASP TYR GLN THR VAL ASP ASP GLU ILE GLU ALA ASN ILE SEQRES 41 A 700 GLU GLU ILE GLU ALA ASN GLU GLU ASP ILE GLY ASP GLY SEQRES 42 A 700 PHE ARG ARG LEU PHE ALA GLN LEU ALA GLY GLU ASP ALA SEQRES 43 A 700 GLU ILE SER ALA PHE GLU LEU GLN THR ILE LEU ARG ARG SEQRES 44 A 700 VAL LEU ALA LYS ARG GLU ASP ILE LYS SER ASP GLY PHE SEQRES 45 A 700 SER ILE GLU THR CYS LYS ILE MET VAL ASP MET LEU ASP SEQRES 46 A 700 GLU ASP GLY SER GLY LYS LEU GLY LEU LYS GLU PHE TYR SEQRES 47 A 700 ILE LEU TRP THR LYS ILE GLN LYS TYR GLN LYS ILE TYR SEQRES 48 A 700 ARG GLU ILE ASP VAL ASP ARG SER GLY THR MET ASN SER SEQRES 49 A 700 TYR GLU MET ARG LYS ALA LEU GLU GLU ALA GLY PHE LYS SEQRES 50 A 700 LEU PRO CYS GLN LEU HIS GLN VAL ILE VAL ALA ARG PHE SEQRES 51 A 700 ALA ASP ASP GLU LEU ILE ILE ASP PHE ASP ASN PHE VAL SEQRES 52 A 700 ARG CYS LEU VAL ARG LEU GLU ILE LEU PHE LYS ILE PHE SEQRES 53 A 700 LYS GLN LEU ASP PRO GLU ASN THR GLY THR ILE GLN LEU SEQRES 54 A 700 ASP LEU ILE SER TRP LEU SER PHE SER VAL LEU SEQRES 1 B 184 MET HIS TYR SER ASN ILE GLU ALA ASN GLU SER GLU GLU SEQRES 2 B 184 GLU ARG GLN PHE ARG LYS LEU PHE VAL GLN LEU ALA GLY SEQRES 3 B 184 ASP ASP MET GLU VAL SER ALA THR GLU LEU MET ASN ILE SEQRES 4 B 184 LEU ASN LYS VAL VAL THR ARG HIS PRO ASP LEU LYS THR SEQRES 5 B 184 ASP GLY PHE GLY ILE ASP THR CYS ARG SER MET VAL ALA SEQRES 6 B 184 VAL MET ASP SER ASP THR THR GLY LYS LEU GLY PHE GLU SEQRES 7 B 184 GLU PHE LYS TYR LEU TRP ASN ASN ILE LYS LYS TRP GLN SEQRES 8 B 184 GLY ILE TYR LYS ARG PHE ASP THR ASP ARG SER GLY THR SEQRES 9 B 184 ILE GLY SER ASN GLU LEU PRO GLY ALA PHE GLU ALA ALA SEQRES 10 B 184 GLY PHE HIS LEU ASN GLN HIS ILE TYR SER MET ILE ILE SEQRES 11 B 184 ARG ARG TYR SER ASP GLU THR GLY ASN MET ASP PHE ASP SEQRES 12 B 184 ASN PHE ILE SER CYS LEU VAL ARG LEU ASP ALA MET PHE SEQRES 13 B 184 ARG ALA PHE ARG SER LEU ASP LYS ASN GLY THR GLY GLN SEQRES 14 B 184 ILE GLN VAL ASN ILE GLN GLU TRP LEU GLN LEU THR MET SEQRES 15 B 184 TYR SER FORMUL 3 HOH *358(H2 O) HELIX 1 1 GLY A 3 ALA A 15 1 13 HELIX 2 2 SER A 20 ALA A 24 5 5 HELIX 3 3 LEU A 28 GLN A 30 5 3 HELIX 4 4 ASP A 31 ALA A 42 1 12 HELIX 5 5 LEU A 54 LEU A 58 5 5 HELIX 6 6 ARG A 77 ILE A 81 5 5 HELIX 7 7 SER A 105 SER A 113 1 9 HELIX 8 8 LEU A 114 LEU A 116 5 3 HELIX 9 9 ASN A 117 ARG A 123 1 7 HELIX 10 10 PHE A 176 ILE A 188 1 13 HELIX 11 11 ASN A 189 GLY A 190 5 2 HELIX 12 12 CYS A 191 GLY A 198 5 8 HELIX 13 13 ALA A 199 GLY A 209 1 11 HELIX 14 14 ASN A 223 LYS A 234 1 12 HELIX 15 15 PHE A 328 TYR A 335 1 8 HELIX 16 16 TYR A 377 TRP A 382 1 6 HELIX 17 17 GLY A 531 GLY A 543 1 13 HELIX 18 18 GLU A 544 ALA A 546 5 3 HELIX 19 19 ALA A 550 LYS A 563 1 14 HELIX 20 20 SER A 573 ASP A 585 1 13 HELIX 21 21 GLY A 593 ASP A 615 1 23 HELIX 22 22 GLU A 626 ALA A 634 1 9 HELIX 23 23 PRO A 639 ALA A 651 1 13 HELIX 24 24 ASP A 658 ASP A 680 1 23 HELIX 25 25 LEU A 691 VAL A 699 1 9 HELIX 26 26 SER B 11 GLY B 26 1 16 HELIX 27 27 SER B 32 ASN B 41 1 10 HELIX 28 28 GLY B 56 ASP B 68 1 13 HELIX 29 29 PHE B 77 ASP B 98 1 22 HELIX 30 30 GLU B 109 ALA B 117 1 9 HELIX 31 31 ASN B 122 SER B 134 1 13 HELIX 32 32 PHE B 142 LEU B 162 1 21 HELIX 33 33 ILE B 174 TYR B 183 1 10 SHEET 1 A 3 ILE A 25 LYS A 26 0 SHEET 2 A 3 GLU A 148 ASP A 155 1 O TRP A 149 N ILE A 25 SHEET 3 A 3 ILE A 138 GLN A 145 -1 N PHE A 139 O VAL A 154 SHEET 1 B 2 GLU A 74 LYS A 76 0 SHEET 2 B 2 LEU A 158 THR A 160 -1 N LEU A 158 O LYS A 76 SHEET 1 C 2 ILE A 97 CYS A 98 0 SHEET 2 C 2 HIS A 169 SER A 170 -1 N HIS A 169 O CYS A 98 SHEET 1 D 6 ILE A 211 GLU A 216 0 SHEET 2 D 6 ARG A 337 ASN A 342 -1 O LEU A 338 N TYR A 215 SHEET 3 D 6 LEU A 237 SER A 241 -1 O LEU A 237 N CYS A 341 SHEET 4 D 6 TYR A 264 GLU A 271 -1 O TYR A 264 N CYS A 240 SHEET 5 D 6 LYS A 280 ARG A 285 -1 N LEU A 281 O GLU A 270 SHEET 6 D 6 GLU A 323 SER A 327 -1 O PHE A 324 N ILE A 284 SHEET 1 E 4 LYS A 357 TRP A 365 0 SHEET 2 E 4 GLY A 495 SER A 503 -1 O GLY A 495 N TRP A 365 SHEET 3 E 4 CYS A 405 GLN A 413 -1 N LEU A 408 O PHE A 502 SHEET 4 E 4 GLU A 470 LEU A 477 -1 O VAL A 471 N LEU A 411 SHEET 1 F 4 ILE A 429 GLU A 435 0 SHEET 2 F 4 GLY A 480 THR A 488 -1 N VAL A 483 O TYR A 434 SHEET 3 F 4 TYR A 387 LEU A 391 -1 N TYR A 387 O LEU A 484 SHEET 4 F 4 ALA A 507 THR A 511 -1 O ASP A 508 N LYS A 390 SHEET 1 G 2 GLU A 517 ALA A 518 0 SHEET 2 G 2 PHE A 636 LYS A 637 -1 O LYS A 637 N GLU A 517 SHEET 1 H 2 ILE A 548 SER A 549 0 SHEET 2 H 2 LYS A 591 LEU A 592 -1 N LEU A 592 O ILE A 548 SHEET 1 I 2 MET A 622 ASN A 623 0 SHEET 2 I 2 ILE A 656 ILE A 657 -1 N ILE A 657 O MET A 622 SHEET 1 J 2 THR A 686 ASP A 690 0 SHEET 2 J 2 GLN B 169 ASN B 173 -1 N ILE B 170 O LEU A 689 SHEET 1 K 2 GLU B 30 VAL B 31 0 SHEET 2 K 2 LEU B 75 GLY B 76 -1 N LEU B 75 O VAL B 31 SHEET 1 L 2 THR B 104 ILE B 105 0 SHEET 2 L 2 MET B 140 ASP B 141 -1 O MET B 140 N ILE B 105 CRYST1 57.696 80.181 80.720 60.37 70.85 79.49 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017332 -0.003217 -0.005108 0.00000 SCALE2 0.000000 0.012685 -0.006714 0.00000 SCALE3 0.000000 0.000000 0.014838 0.00000