PDB Short entry for 1EBF HEADER OXIDOREDUCTASE 24-JAN-00 1EBF TITLE HOMOSERINE DEHYDROGENASE FROM S. CEREVISIAE COMPLEX WITH NAD+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: HOMOSERINE DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: HOM6P; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET22B KEYWDS DEHYDROGENASE, DINUCLEOTIDE, HOMOSERINE, NAD, DIMER, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR B.DELABARRE,P.R.THOMPSON,G.D.WRIGHT,A.M.BERGHUIS REVDAT 4 07-FEB-24 1EBF 1 REMARK REVDAT 3 04-OCT-17 1EBF 1 REMARK REVDAT 2 24-FEB-09 1EBF 1 VERSN REVDAT 1 08-MAR-00 1EBF 0 JRNL AUTH B.DELABARRE,P.R.THOMPSON,G.D.WRIGHT,A.M.BERGHUIS JRNL TITL CRYSTAL STRUCTURES OF HOMOSERINE DEHYDROGENASE SUGGEST A JRNL TITL 2 NOVEL CATALYTIC MECHANISM FOR OXIDOREDUCTASES. JRNL REF NAT.STRUCT.BIOL. V. 7 238 2000 JRNL REFN ISSN 1072-8368 JRNL PMID 10700284 JRNL DOI 10.1038/73359 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH B.DELABARRE,S.L.JACQUES,C.E.PRATT,G.D.WRIGHT,A.M.BERGHUIS REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY X-RAY SIFFRACTION STUDIES OF REMARK 1 TITL 2 HOMOSERINE DEHYDROGENASE FROM SACCHAROMYCES CEREVISIAE REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 54 413 1998 REMARK 1 REFN ISSN 0907-4449 REMARK 1 DOI 10.1107/S0907444997011967 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 112809.290 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 85.7 REMARK 3 NUMBER OF REFLECTIONS : 32162 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2232 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 64.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3642 REMARK 3 BIN R VALUE (WORKING SET) : 0.2270 REMARK 3 BIN FREE R VALUE : 0.2830 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 6.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 270 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.017 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5420 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 46 REMARK 3 SOLVENT ATOMS : 253 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.19000 REMARK 3 B22 (A**2) : 1.19000 REMARK 3 B33 (A**2) : -2.38000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.28 REMARK 3 ESD FROM SIGMAA (A) : 0.21 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.29 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.910 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.130 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.870 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.620 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.340 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 29.97 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PA REMARK 3 PARAMETER FILE 2 : NAD_MOD.PAR REMARK 3 PARAMETER FILE 3 : WATER.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NAD.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: MODEL REFINED AGAINST AMPLITUDES REMARK 4 REMARK 4 1EBF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-FEB-00. REMARK 100 THE DEPOSITION ID IS D_1000010433. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JAN-97 REMARK 200 TEMPERATURE (KELVIN) : 218 REMARK 200 PH : 4.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS II REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 188533 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 38.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.49000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: SOLVE, SHARP, GLRF, CCP4, DM, CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULPHATE, CALCIUM CHLORIDE, REMARK 280 NAD+, SODIUM ACETATE , PH 4.4, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 125.08250 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 40.19800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 40.19800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 187.62375 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 40.19800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 40.19800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 62.54125 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 40.19800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 40.19800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 187.62375 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 40.19800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 40.19800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 62.54125 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 125.08250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ASYMMETRIC UNIT CONTAINS A DIMER WITH A SINGLE NAD+ REMARK 300 MOLECULE BOUND TO ONE PROTOMER AND A SODIUM ION BOUND TO EACH REMARK 300 PROTOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 3 97.72 50.12 REMARK 500 GLU A 42 -75.86 -92.00 REMARK 500 PHE A 50 13.21 85.52 REMARK 500 ASP A 58 77.19 -114.00 REMARK 500 ASN A 92 56.96 -95.79 REMARK 500 SER A 122 -131.19 -119.24 REMARK 500 THR A 136 -16.04 67.63 REMARK 500 ALA A 148 -116.95 50.61 REMARK 500 ASP A 191 40.41 -100.98 REMARK 500 PRO A 209 -39.04 -34.90 REMARK 500 PRO A 238 -9.45 -56.47 REMARK 500 PRO A 248 106.02 -43.88 REMARK 500 LYS A 249 -157.83 14.56 REMARK 500 PRO A 250 -1.99 -49.46 REMARK 500 GLU A 252 -98.15 -88.69 REMARK 500 SER A 253 44.70 -61.00 REMARK 500 ALA A 257 -111.76 53.13 REMARK 500 ALA B 41 -139.99 55.57 REMARK 500 SER B 122 -143.54 -101.35 REMARK 500 SER B 132 59.59 -61.13 REMARK 500 ALA B 144 7.49 -69.26 REMARK 500 ALA B 148 -123.25 50.69 REMARK 500 ILE B 152 -66.87 -105.79 REMARK 500 ALA B 189 84.86 29.21 REMARK 500 ASP B 191 17.55 170.10 REMARK 500 PRO B 248 115.84 -31.26 REMARK 500 LYS B 249 -155.43 12.44 REMARK 500 LEU B 251 41.07 -143.23 REMARK 500 VAL B 254 -83.16 -151.61 REMARK 500 LYS B 255 147.88 -30.54 REMARK 500 ALA B 257 -88.91 97.11 REMARK 500 SER B 265 -7.01 -56.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A2104 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 143 O REMARK 620 2 GLU A 143 OE2 76.7 REMARK 620 3 VAL A 146 O 79.2 113.1 REMARK 620 4 ALA A 148 O 78.4 121.2 113.2 REMARK 620 5 LEU A 150 O 137.0 65.2 133.1 104.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B2114 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 143 O REMARK 620 2 GLU B 143 OE2 72.7 REMARK 620 3 VAL B 146 O 77.5 106.5 REMARK 620 4 ALA B 148 O 82.3 126.9 112.8 REMARK 620 5 LEU B 150 O 139.2 71.3 131.3 104.7 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 2104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 2114 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 2109 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1EBU RELATED DB: PDB REMARK 900 HOMOSERINE DEHYDROGENASE COMPLEX WITH NAD ANALOGUE AND L-HOMOSERINE DBREF 1EBF A 2 359 UNP P31116 DHOM_YEAST 2 359 DBREF 1EBF B 2 359 UNP P31116 DHOM_YEAST 2 359 SEQRES 1 A 358 SER THR LYS VAL VAL ASN VAL ALA VAL ILE GLY ALA GLY SEQRES 2 A 358 VAL VAL GLY SER ALA PHE LEU ASP GLN LEU LEU ALA MET SEQRES 3 A 358 LYS SER THR ILE THR TYR ASN LEU VAL LEU LEU ALA GLU SEQRES 4 A 358 ALA GLU ARG SER LEU ILE SER LYS ASP PHE SER PRO LEU SEQRES 5 A 358 ASN VAL GLY SER ASP TRP LYS ALA ALA LEU ALA ALA SER SEQRES 6 A 358 THR THR LYS THR LEU PRO LEU ASP ASP LEU ILE ALA HIS SEQRES 7 A 358 LEU LYS THR SER PRO LYS PRO VAL ILE LEU VAL ASP ASN SEQRES 8 A 358 THR SER SER ALA TYR ILE ALA GLY PHE TYR THR LYS PHE SEQRES 9 A 358 VAL GLU ASN GLY ILE SER ILE ALA THR PRO ASN LYS LYS SEQRES 10 A 358 ALA PHE SER SER ASP LEU ALA THR TRP LYS ALA LEU PHE SEQRES 11 A 358 SER ASN LYS PRO THR ASN GLY PHE VAL TYR HIS GLU ALA SEQRES 12 A 358 THR VAL GLY ALA GLY LEU PRO ILE ILE SER PHE LEU ARG SEQRES 13 A 358 GLU ILE ILE GLN THR GLY ASP GLU VAL GLU LYS ILE GLU SEQRES 14 A 358 GLY ILE PHE SER GLY THR LEU SER TYR ILE PHE ASN GLU SEQRES 15 A 358 PHE SER THR SER GLN ALA ASN ASP VAL LYS PHE SER ASP SEQRES 16 A 358 VAL VAL LYS VAL ALA LYS LYS LEU GLY TYR THR GLU PRO SEQRES 17 A 358 ASP PRO ARG ASP ASP LEU ASN GLY LEU ASP VAL ALA ARG SEQRES 18 A 358 LYS VAL THR ILE VAL GLY ARG ILE SER GLY VAL GLU VAL SEQRES 19 A 358 GLU SER PRO THR SER PHE PRO VAL GLN SER LEU ILE PRO SEQRES 20 A 358 LYS PRO LEU GLU SER VAL LYS SER ALA ASP GLU PHE LEU SEQRES 21 A 358 GLU LYS LEU SER ASP TYR ASP LYS ASP LEU THR GLN LEU SEQRES 22 A 358 LYS LYS GLU ALA ALA THR GLU ASN LYS VAL LEU ARG PHE SEQRES 23 A 358 ILE GLY LYS VAL ASP VAL ALA THR LYS SER VAL SER VAL SEQRES 24 A 358 GLY ILE GLU LYS TYR ASP TYR SER HIS PRO PHE ALA SER SEQRES 25 A 358 LEU LYS GLY SER ASP ASN VAL ILE SER ILE LYS THR LYS SEQRES 26 A 358 ARG TYR THR ASN PRO VAL VAL ILE GLN GLY ALA GLY ALA SEQRES 27 A 358 GLY ALA ALA VAL THR ALA ALA GLY VAL LEU GLY ASP VAL SEQRES 28 A 358 ILE LYS ILE ALA GLN ARG LEU SEQRES 1 B 358 SER THR LYS VAL VAL ASN VAL ALA VAL ILE GLY ALA GLY SEQRES 2 B 358 VAL VAL GLY SER ALA PHE LEU ASP GLN LEU LEU ALA MET SEQRES 3 B 358 LYS SER THR ILE THR TYR ASN LEU VAL LEU LEU ALA GLU SEQRES 4 B 358 ALA GLU ARG SER LEU ILE SER LYS ASP PHE SER PRO LEU SEQRES 5 B 358 ASN VAL GLY SER ASP TRP LYS ALA ALA LEU ALA ALA SER SEQRES 6 B 358 THR THR LYS THR LEU PRO LEU ASP ASP LEU ILE ALA HIS SEQRES 7 B 358 LEU LYS THR SER PRO LYS PRO VAL ILE LEU VAL ASP ASN SEQRES 8 B 358 THR SER SER ALA TYR ILE ALA GLY PHE TYR THR LYS PHE SEQRES 9 B 358 VAL GLU ASN GLY ILE SER ILE ALA THR PRO ASN LYS LYS SEQRES 10 B 358 ALA PHE SER SER ASP LEU ALA THR TRP LYS ALA LEU PHE SEQRES 11 B 358 SER ASN LYS PRO THR ASN GLY PHE VAL TYR HIS GLU ALA SEQRES 12 B 358 THR VAL GLY ALA GLY LEU PRO ILE ILE SER PHE LEU ARG SEQRES 13 B 358 GLU ILE ILE GLN THR GLY ASP GLU VAL GLU LYS ILE GLU SEQRES 14 B 358 GLY ILE PHE SER GLY THR LEU SER TYR ILE PHE ASN GLU SEQRES 15 B 358 PHE SER THR SER GLN ALA ASN ASP VAL LYS PHE SER ASP SEQRES 16 B 358 VAL VAL LYS VAL ALA LYS LYS LEU GLY TYR THR GLU PRO SEQRES 17 B 358 ASP PRO ARG ASP ASP LEU ASN GLY LEU ASP VAL ALA ARG SEQRES 18 B 358 LYS VAL THR ILE VAL GLY ARG ILE SER GLY VAL GLU VAL SEQRES 19 B 358 GLU SER PRO THR SER PHE PRO VAL GLN SER LEU ILE PRO SEQRES 20 B 358 LYS PRO LEU GLU SER VAL LYS SER ALA ASP GLU PHE LEU SEQRES 21 B 358 GLU LYS LEU SER ASP TYR ASP LYS ASP LEU THR GLN LEU SEQRES 22 B 358 LYS LYS GLU ALA ALA THR GLU ASN LYS VAL LEU ARG PHE SEQRES 23 B 358 ILE GLY LYS VAL ASP VAL ALA THR LYS SER VAL SER VAL SEQRES 24 B 358 GLY ILE GLU LYS TYR ASP TYR SER HIS PRO PHE ALA SER SEQRES 25 B 358 LEU LYS GLY SER ASP ASN VAL ILE SER ILE LYS THR LYS SEQRES 26 B 358 ARG TYR THR ASN PRO VAL VAL ILE GLN GLY ALA GLY ALA SEQRES 27 B 358 GLY ALA ALA VAL THR ALA ALA GLY VAL LEU GLY ASP VAL SEQRES 28 B 358 ILE LYS ILE ALA GLN ARG LEU HET NA A2104 1 HET NAD A2109 44 HET NA B2114 1 HETNAM NA SODIUM ION HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE FORMUL 3 NA 2(NA 1+) FORMUL 4 NAD C21 H27 N7 O14 P2 FORMUL 6 HOH *253(H2 O) HELIX 1 1 GLY A 14 MET A 27 1 14 HELIX 2 2 ASP A 58 ALA A 65 1 8 HELIX 3 3 PRO A 72 LYS A 81 1 10 HELIX 4 4 SER A 95 GLY A 100 1 6 HELIX 5 5 PHE A 101 ASN A 108 1 8 HELIX 6 6 LYS A 117 SER A 121 5 5 HELIX 7 7 ASP A 123 PHE A 131 1 9 HELIX 8 8 HIS A 142 VAL A 146 5 5 HELIX 9 9 ILE A 152 GLY A 163 1 12 HELIX 10 10 SER A 174 SER A 185 1 12 HELIX 11 11 LYS A 193 GLY A 205 1 13 HELIX 12 12 PRO A 211 ASN A 216 1 6 HELIX 13 13 GLY A 217 SER A 231 1 15 HELIX 14 14 PRO A 248 GLU A 252 5 5 HELIX 15 15 ALA A 257 SER A 265 1 9 HELIX 16 16 TYR A 267 ALA A 279 1 13 HELIX 17 17 HIS A 309 LEU A 314 5 6 HELIX 18 18 GLY A 340 LEU A 359 1 20 HELIX 19 19 GLY B 14 MET B 27 1 14 HELIX 20 20 ASP B 58 SER B 66 1 9 HELIX 21 21 PRO B 72 THR B 82 1 11 HELIX 22 22 SER B 95 GLY B 100 1 6 HELIX 23 23 PHE B 101 ASN B 108 1 8 HELIX 24 24 LYS B 118 SER B 122 5 5 HELIX 25 25 ASP B 123 ALA B 129 1 7 HELIX 26 26 HIS B 142 VAL B 146 5 5 HELIX 27 27 ILE B 152 GLY B 163 1 12 HELIX 28 28 SER B 174 SER B 185 1 12 HELIX 29 29 LYS B 193 LEU B 204 1 12 HELIX 30 30 PRO B 211 ASN B 216 1 6 HELIX 31 31 GLY B 217 SER B 231 1 15 HELIX 32 32 ALA B 257 SER B 265 1 9 HELIX 33 33 TYR B 267 GLU B 281 1 15 HELIX 34 34 HIS B 309 SER B 313 5 5 HELIX 35 35 GLY B 340 LEU B 359 1 20 SHEET 1 A 6 SER A 44 ILE A 46 0 SHEET 2 A 6 THR A 32 ALA A 39 -1 O LEU A 38 N LEU A 45 SHEET 3 A 6 VAL A 5 ILE A 11 1 N VAL A 6 O THR A 32 SHEET 4 A 6 VAL A 87 ASP A 91 1 O ILE A 88 N ALA A 9 SHEET 5 A 6 SER A 111 ALA A 113 1 O SER A 111 N LEU A 89 SHEET 6 A 6 VAL A 140 TYR A 141 1 N TYR A 141 O ILE A 112 SHEET 1 B10 SER A 297 ASP A 306 0 SHEET 2 B10 LYS A 283 ASP A 292 -1 N VAL A 284 O TYR A 305 SHEET 3 B10 VAL A 166 ILE A 172 -1 O ILE A 169 N VAL A 291 SHEET 4 B10 ASN A 319 THR A 325 -1 O VAL A 320 N ILE A 172 SHEET 5 B10 VAL A 332 GLY A 336 -1 O VAL A 332 N ILE A 323 SHEET 6 B10 VAL B 332 ALA B 337 -1 O VAL B 333 N GLN A 335 SHEET 7 B10 ASP B 318 THR B 325 -1 N ASN B 319 O GLY B 336 SHEET 8 B10 VAL B 166 ILE B 172 -1 N GLU B 167 O LYS B 324 SHEET 9 B10 LYS B 283 ASP B 292 -1 N GLY B 289 O GLY B 171 SHEET 10 B10 SER B 297 ASP B 306 -1 O SER B 297 N ASP B 292 SHEET 1 C 6 ARG B 43 ILE B 46 0 SHEET 2 C 6 THR B 32 GLU B 40 -1 O LEU B 38 N LEU B 45 SHEET 3 C 6 VAL B 5 ILE B 11 1 O VAL B 6 N ASN B 34 SHEET 4 C 6 VAL B 87 ASP B 91 1 O ILE B 88 N ALA B 9 SHEET 5 C 6 SER B 111 ALA B 113 1 O SER B 111 N LEU B 89 SHEET 6 C 6 VAL B 140 TYR B 141 1 N TYR B 141 O ILE B 112 LINK O GLU A 143 NA NA A2104 1555 1555 2.73 LINK OE2 GLU A 143 NA NA A2104 1555 1555 2.89 LINK O VAL A 146 NA NA A2104 1555 1555 2.88 LINK O ALA A 148 NA NA A2104 1555 1555 2.82 LINK O LEU A 150 NA NA A2104 1555 1555 2.75 LINK O GLU B 143 NA NA B2114 1555 1555 2.84 LINK OE2 GLU B 143 NA NA B2114 1555 1555 2.72 LINK O VAL B 146 NA NA B2114 1555 1555 2.64 LINK O ALA B 148 NA NA B2114 1555 1555 2.68 LINK O LEU B 150 NA NA B2114 1555 1555 2.76 SITE 1 AC1 5 GLU A 143 VAL A 146 GLY A 147 ALA A 148 SITE 2 AC1 5 LEU A 150 SITE 1 AC2 5 GLU B 143 VAL B 146 GLY B 147 ALA B 148 SITE 2 AC2 5 LEU B 150 SITE 1 AC3 14 ILE A 11 ALA A 13 GLY A 14 VAL A 15 SITE 2 AC3 14 VAL A 16 GLU A 40 ALA A 41 THR A 93 SITE 3 AC3 14 SER A 94 PRO A 115 ASN A 116 GLY A 340 SITE 4 AC3 14 HOH A2123 HOH A2186 CRYST1 80.396 80.396 250.165 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012438 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012438 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003997 0.00000