PDB Short entry for 1EUI HEADER COMPLEX (HYDROLASE/INHIBITOR) 18-JUN-98 1EUI TITLE ESCHERICHIA COLI URACIL-DNA GLYCOSYLASE COMPLEX WITH URACIL-DNA TITLE 2 GLYCOSYLASE INHIBITOR PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: URACIL-DNA GLYCOSYLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ECUDG; COMPND 5 EC: 3.2.2.-; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: URACIL-DNA GLYCOSYLASE INHIBITOR PROTEIN; COMPND 8 CHAIN: C, D; COMPND 9 SYNONYM: UGI SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: BACILLUS PHAGE PBS2; SOURCE 6 ORGANISM_TAXID: 10684 KEYWDS GLYCOSYLASE, INHIBITOR, DNA REPAIR, BASE EXCISION, COMPLEX KEYWDS 2 (HYDROLASE-INHIBITOR), COMPLEX (HYDROLASE-INHIBITOR) COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.RAVISHANKAR,M.B.SAGAR,S.ROY,K.PURNAPATRE,P.HANDA,U.VARSHNEY, AUTHOR 2 M.VIJAYAN REVDAT 3 09-AUG-23 1EUI 1 REMARK REVDAT 2 24-FEB-09 1EUI 1 VERSN REVDAT 1 22-JUN-99 1EUI 0 JRNL AUTH R.RAVISHANKAR,M.BIDYA SAGAR,S.ROY,K.PURNAPATRE,P.HANDA, JRNL AUTH 2 U.VARSHNEY,M.VIJAYAN JRNL TITL X-RAY ANALYSIS OF A COMPLEX OF ESCHERICHIA COLI URACIL DNA JRNL TITL 2 GLYCOSYLASE (ECUDG) WITH A PROTEINACEOUS INHIBITOR. THE JRNL TITL 3 STRUCTURE ELUCIDATION OF A PROKARYOTIC UDG. JRNL REF NUCLEIC ACIDS RES. V. 26 4880 1998 JRNL REFN ISSN 0305-1048 JRNL PMID 9776748 JRNL DOI 10.1093/NAR/26.21.4880 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.ROY,K.PURNAPATRE,P.HANDA,M.BOYANAPALLI,U.VARSHNEY REMARK 1 TITL USE OF A COUPLED TRANSCRIPTIONAL SYSTEM FOR CONSISTENT REMARK 1 TITL 2 OVEREXPRESSION AND PURIFICATION OF UDG-UGI COMPLEX AND UGI REMARK 1 TITL 3 FROM ESCHERICHIA COLI REMARK 1 REF PROTEIN EXPR.PURIF. V. 13 155 1998 REMARK 1 REFN ISSN 1046-5928 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 90.7 REMARK 3 NUMBER OF REFLECTIONS : 9936 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.300 REMARK 3 FREE R VALUE TEST SET COUNT : 1028 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.39 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1286 REMARK 3 BIN R VALUE (WORKING SET) : 0.2520 REMARK 3 BIN FREE R VALUE : 0.3650 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 154 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.029 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4571 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 116 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM SIGMAA (A) : 0.23 REMARK 3 LOW RESOLUTION CUTOFF (A) : 10.0 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.43 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.38 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.013 REMARK 3 BOND ANGLES (DEGREES) : 1.800 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.580 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : GROUP REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : RESTRAIN REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : WAT.PAR REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : WAT.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1EUI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000173173. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JAN-98 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH2R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11074 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.13100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.47100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR 3.1 REMARK 200 STARTING MODEL: PDB ENTRY 1UGI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.4 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.68650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.06600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.88600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.06600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.68650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.88600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THERE ARE TWO ECUDG-UGI COMPLEXES IN THE ASYMMETRIC UNIT REMARK 300 CHAINS A AND C FORM ONE COMPLEX WHILE CHAINS B AND D FORM REMARK 300 THE OTHER COMPLEX. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 2 REMARK 465 ASN A 3 REMARK 465 GLU A 4 REMARK 465 LEU A 5 REMARK 465 GLU A 227 REMARK 465 SER A 228 REMARK 465 GLU A 229 REMARK 465 ALA B 2 REMARK 465 ASN B 3 REMARK 465 GLU B 4 REMARK 465 LEU B 5 REMARK 465 ALA B 226 REMARK 465 GLU B 227 REMARK 465 SER B 228 REMARK 465 GLU B 229 REMARK 465 MET C 1 REMARK 465 THR C 2 REMARK 465 ASN C 3 REMARK 465 LEU C 4 REMARK 465 SER C 5 REMARK 465 ASP C 6 REMARK 465 ILE C 7 REMARK 465 ILE C 8 REMARK 465 GLU C 9 REMARK 465 LYS C 10 REMARK 465 GLU C 11 REMARK 465 THR C 12 REMARK 465 GLY C 13 REMARK 465 LYS C 14 REMARK 465 MET D 1 REMARK 465 THR D 2 REMARK 465 ASN D 3 REMARK 465 LEU D 4 REMARK 465 SER D 5 REMARK 465 ASP D 6 REMARK 465 ILE D 7 REMARK 465 ILE D 8 REMARK 465 GLU D 9 REMARK 465 LYS D 10 REMARK 465 GLU D 11 REMARK 465 THR D 12 REMARK 465 GLY D 13 REMARK 465 LYS D 14 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 9 CG OD1 OD2 REMARK 470 LEU A 11 CG CD1 CD2 REMARK 470 LYS A 42 CG CD CE NZ REMARK 470 LYS A 177 CG CD CE NZ REMARK 470 ARG A 195 CG CD NE CZ NH1 NH2 REMARK 470 THR B 6 OG1 CG2 REMARK 470 VAL B 10 CG1 CG2 REMARK 470 LYS B 171 CG CD CE NZ REMARK 470 LYS B 177 CG CD CE NZ REMARK 470 ARG B 179 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 195 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 211 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 THR A 51 CB THR A 51 CG2 -0.198 REMARK 500 ALA A 226 C ALA A 226 O 0.122 REMARK 500 TRP B 209 CG TRP B 209 CD1 -0.097 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 38 N - CA - C ANGL. DEV. = 19.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 7 -1.71 73.20 REMARK 500 ASP A 9 -85.99 -138.71 REMARK 500 LEU A 11 -47.64 176.70 REMARK 500 TYR A 38 -97.88 -71.59 REMARK 500 PRO A 39 100.50 -39.08 REMARK 500 GLN A 41 -15.07 -45.43 REMARK 500 VAL A 56 97.31 -52.49 REMARK 500 GLN A 63 -104.60 -79.17 REMARK 500 GLN A 71 -71.54 -84.38 REMARK 500 HIS A 73 21.35 -144.61 REMARK 500 PHE A 77 -45.33 70.29 REMARK 500 PRO A 81 3.29 -46.61 REMARK 500 PRO A 101 2.45 -66.42 REMARK 500 PHE A 103 -175.28 -41.74 REMARK 500 THR A 104 169.61 172.56 REMARK 500 PRO A 106 -91.52 -62.38 REMARK 500 ASN A 107 14.12 154.57 REMARK 500 ALA A 137 45.26 -87.45 REMARK 500 SER A 138 12.55 -161.07 REMARK 500 LYS A 170 -118.66 50.42 REMARK 500 LYS A 171 -71.94 -9.35 REMARK 500 ALA A 173 70.09 -168.77 REMARK 500 ASP A 176 98.33 -67.57 REMARK 500 PRO A 188 -9.98 -58.50 REMARK 500 LEU A 191 26.53 -76.11 REMARK 500 SER A 192 -35.55 -166.78 REMARK 500 ARG A 195 49.07 30.35 REMARK 500 PHE A 198 -10.90 -45.02 REMARK 500 PRO A 222 -169.55 -54.36 REMARK 500 VAL A 223 -128.45 -164.36 REMARK 500 LEU A 224 68.47 162.71 REMARK 500 PRO A 225 -174.50 -61.12 REMARK 500 TRP B 7 -19.28 66.66 REMARK 500 VAL B 10 -26.06 67.96 REMARK 500 TYR B 38 -115.11 -71.70 REMARK 500 PRO B 39 90.67 -23.34 REMARK 500 PRO B 40 139.17 -38.94 REMARK 500 VAL B 44 -38.40 -34.02 REMARK 500 VAL B 56 92.73 -49.66 REMARK 500 GLN B 63 -102.06 -86.94 REMARK 500 HIS B 73 16.37 -152.17 REMARK 500 PHE B 77 -39.42 64.70 REMARK 500 PRO B 81 -2.15 -44.24 REMARK 500 PRO B 101 8.06 -65.11 REMARK 500 THR B 104 -120.99 -115.08 REMARK 500 PRO B 106 -162.51 -77.55 REMARK 500 ALA B 137 41.46 -85.06 REMARK 500 SER B 138 11.23 -152.58 REMARK 500 LYS B 170 -124.63 55.35 REMARK 500 LYS B 171 -84.00 3.20 REMARK 500 REMARK 500 THIS ENTRY HAS 66 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 19 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 1EUI A 2 229 UNP P12295 UNG_ECOLI 1 228 DBREF 1EUI B 2 229 UNP P12295 UNG_ECOLI 1 228 DBREF 1EUI C 1 84 UNP P14739 UNGI_BPPB2 1 84 DBREF 1EUI D 1 84 UNP P14739 UNGI_BPPB2 1 84 SEQRES 1 A 228 ALA ASN GLU LEU THR TRP HIS ASP VAL LEU ALA GLU GLU SEQRES 2 A 228 LYS GLN GLN PRO TYR PHE LEU ASN THR LEU GLN THR VAL SEQRES 3 A 228 ALA SER GLU ARG GLN SER GLY VAL THR ILE TYR PRO PRO SEQRES 4 A 228 GLN LYS ASP VAL PHE ASN ALA PHE ARG PHE THR GLU LEU SEQRES 5 A 228 GLY ASP VAL LYS VAL VAL ILE LEU GLY GLN ASP PRO TYR SEQRES 6 A 228 HIS GLY PRO GLY GLN ALA HIS GLY LEU ALA PHE SER VAL SEQRES 7 A 228 ARG PRO GLY ILE ALA ILE PRO PRO SER LEU LEU ASN MET SEQRES 8 A 228 TYR LYS GLU LEU GLU ASN THR ILE PRO GLY PHE THR ARG SEQRES 9 A 228 PRO ASN HIS GLY TYR LEU GLU SER TRP ALA ARG GLN GLY SEQRES 10 A 228 VAL LEU LEU LEU ASN THR VAL LEU THR VAL ARG ALA GLY SEQRES 11 A 228 GLN ALA HIS SER HIS ALA SER LEU GLY TRP GLU THR PHE SEQRES 12 A 228 THR ASP LYS VAL ILE SER LEU ILE ASN GLN HIS ARG GLU SEQRES 13 A 228 GLY VAL VAL PHE LEU LEU TRP GLY SER HIS ALA GLN LYS SEQRES 14 A 228 LYS GLY ALA ILE ILE ASP LYS GLN ARG HIS HIS VAL LEU SEQRES 15 A 228 LYS ALA PRO HIS PRO SER PRO LEU SER ALA HIS ARG GLY SEQRES 16 A 228 PHE PHE GLY CYS ASN HIS PHE VAL LEU ALA ASN GLN TRP SEQRES 17 A 228 LEU GLU GLN ARG GLY GLU THR PRO ILE ASP TRP MET PRO SEQRES 18 A 228 VAL LEU PRO ALA GLU SER GLU SEQRES 1 B 228 ALA ASN GLU LEU THR TRP HIS ASP VAL LEU ALA GLU GLU SEQRES 2 B 228 LYS GLN GLN PRO TYR PHE LEU ASN THR LEU GLN THR VAL SEQRES 3 B 228 ALA SER GLU ARG GLN SER GLY VAL THR ILE TYR PRO PRO SEQRES 4 B 228 GLN LYS ASP VAL PHE ASN ALA PHE ARG PHE THR GLU LEU SEQRES 5 B 228 GLY ASP VAL LYS VAL VAL ILE LEU GLY GLN ASP PRO TYR SEQRES 6 B 228 HIS GLY PRO GLY GLN ALA HIS GLY LEU ALA PHE SER VAL SEQRES 7 B 228 ARG PRO GLY ILE ALA ILE PRO PRO SER LEU LEU ASN MET SEQRES 8 B 228 TYR LYS GLU LEU GLU ASN THR ILE PRO GLY PHE THR ARG SEQRES 9 B 228 PRO ASN HIS GLY TYR LEU GLU SER TRP ALA ARG GLN GLY SEQRES 10 B 228 VAL LEU LEU LEU ASN THR VAL LEU THR VAL ARG ALA GLY SEQRES 11 B 228 GLN ALA HIS SER HIS ALA SER LEU GLY TRP GLU THR PHE SEQRES 12 B 228 THR ASP LYS VAL ILE SER LEU ILE ASN GLN HIS ARG GLU SEQRES 13 B 228 GLY VAL VAL PHE LEU LEU TRP GLY SER HIS ALA GLN LYS SEQRES 14 B 228 LYS GLY ALA ILE ILE ASP LYS GLN ARG HIS HIS VAL LEU SEQRES 15 B 228 LYS ALA PRO HIS PRO SER PRO LEU SER ALA HIS ARG GLY SEQRES 16 B 228 PHE PHE GLY CYS ASN HIS PHE VAL LEU ALA ASN GLN TRP SEQRES 17 B 228 LEU GLU GLN ARG GLY GLU THR PRO ILE ASP TRP MET PRO SEQRES 18 B 228 VAL LEU PRO ALA GLU SER GLU SEQRES 1 C 84 MET THR ASN LEU SER ASP ILE ILE GLU LYS GLU THR GLY SEQRES 2 C 84 LYS GLN LEU VAL ILE GLN GLU SER ILE LEU MET LEU PRO SEQRES 3 C 84 GLU GLU VAL GLU GLU VAL ILE GLY ASN LYS PRO GLU SER SEQRES 4 C 84 ASP ILE LEU VAL HIS THR ALA TYR ASP GLU SER THR ASP SEQRES 5 C 84 GLU ASN VAL MET LEU LEU THR SER ASP ALA PRO GLU TYR SEQRES 6 C 84 LYS PRO TRP ALA LEU VAL ILE GLN ASP SER ASN GLY GLU SEQRES 7 C 84 ASN LYS ILE LYS MET LEU SEQRES 1 D 84 MET THR ASN LEU SER ASP ILE ILE GLU LYS GLU THR GLY SEQRES 2 D 84 LYS GLN LEU VAL ILE GLN GLU SER ILE LEU MET LEU PRO SEQRES 3 D 84 GLU GLU VAL GLU GLU VAL ILE GLY ASN LYS PRO GLU SER SEQRES 4 D 84 ASP ILE LEU VAL HIS THR ALA TYR ASP GLU SER THR ASP SEQRES 5 D 84 GLU ASN VAL MET LEU LEU THR SER ASP ALA PRO GLU TYR SEQRES 6 D 84 LYS PRO TRP ALA LEU VAL ILE GLN ASP SER ASN GLY GLU SEQRES 7 D 84 ASN LYS ILE LYS MET LEU FORMUL 5 HOH *116(H2 O) HELIX 1 1 GLU A 14 GLN A 16 5 3 HELIX 2 2 PRO A 18 SER A 33 1 16 HELIX 3 3 ASN A 46 PHE A 50 1 5 HELIX 4 4 LEU A 53 ASP A 55 5 3 HELIX 5 5 PRO A 87 THR A 99 1 13 HELIX 6 6 GLU A 112 GLN A 117 1 6 HELIX 7 7 TRP A 141 HIS A 155 1 15 HELIX 8 8 GLY A 165 ALA A 168 1 4 HELIX 9 9 LYS A 170 GLY A 172 5 3 HELIX 10 10 PRO A 190 ALA A 193 1 4 HELIX 11 11 HIS A 202 GLN A 212 1 11 HELIX 12 12 LEU B 11 GLN B 16 1 6 HELIX 13 13 PRO B 18 SER B 33 1 16 HELIX 14 14 GLN B 41 VAL B 44 1 4 HELIX 15 15 ASN B 46 PHE B 50 1 5 HELIX 16 16 LEU B 53 ASP B 55 5 3 HELIX 17 17 PRO B 87 THR B 99 1 13 HELIX 18 18 GLU B 112 GLN B 117 1 6 HELIX 19 19 TRP B 141 HIS B 155 1 15 HELIX 20 20 GLY B 165 ALA B 168 1 4 HELIX 21 21 PRO B 190 ALA B 193 1 4 HELIX 22 22 HIS B 202 ARG B 213 1 12 HELIX 23 23 PRO C 26 ILE C 33 1 8 HELIX 24 24 PRO D 26 ILE D 33 1 8 SHEET 1 A 4 VAL A 119 ASN A 123 0 SHEET 2 A 4 VAL A 58 GLY A 62 1 N VAL A 58 O LEU A 120 SHEET 3 A 4 VAL A 160 TRP A 164 1 N VAL A 160 O VAL A 59 SHEET 4 A 4 HIS A 181 ALA A 185 1 N HIS A 181 O PHE A 161 SHEET 1 B 4 VAL B 119 ASN B 123 0 SHEET 2 B 4 VAL B 58 GLY B 62 1 N VAL B 58 O LEU B 120 SHEET 3 B 4 VAL B 160 TRP B 164 1 N VAL B 160 O VAL B 59 SHEET 4 B 4 HIS B 181 ALA B 185 1 N HIS B 181 O PHE B 161 SHEET 1 C 5 GLU C 20 MET C 24 0 SHEET 2 C 5 ILE C 41 ASP C 48 -1 N THR C 45 O GLU C 20 SHEET 3 C 5 GLU C 53 SER C 60 -1 N THR C 59 O LEU C 42 SHEET 4 C 5 PRO C 67 GLN C 73 -1 N GLN C 73 O ASN C 54 SHEET 5 C 5 ASN C 79 MET C 83 -1 N LYS C 82 O LEU C 70 SHEET 1 D 5 GLU D 20 MET D 24 0 SHEET 2 D 5 ILE D 41 ASP D 48 -1 N THR D 45 O GLU D 20 SHEET 3 D 5 GLU D 53 SER D 60 -1 N THR D 59 O LEU D 42 SHEET 4 D 5 PRO D 67 GLN D 73 -1 N GLN D 73 O ASN D 54 SHEET 5 D 5 ASN D 79 MET D 83 -1 N LYS D 82 O LEU D 70 CISPEP 1 ALA C 62 PRO C 63 0 -0.30 CISPEP 2 ALA D 62 PRO D 63 0 1.85 CRYST1 51.373 89.772 142.132 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019465 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011139 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007036 0.00000