PDB Short entry for 1FF3 HEADER OXIDOREDUCTASE 25-JUL-00 1FF3 TITLE STRUCTURE OF THE PEPTIDE METHIONINE SULFOXIDE REDUCTASE TITLE 2 FROM ESCHERICHIA COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDE METHIONINE SULFOXIDE REDUCTASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: PEPTIDE MET(O) REDUCTASE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562 KEYWDS PEPTIDE METHIONINE SULFOXIDE REDUCTASE, ALPHA BETA ROLL, KEYWDS 2 PMSR, MSRA, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR F.TETE-FAVIER,D.COBESSI,S.BOSCHI-MULLER,S.AZZA,G.BRANLANT, AUTHOR 2 A.AUBRY REVDAT 3 24-FEB-09 1FF3 1 VERSN REVDAT 2 30-SEP-03 1FF3 1 DBREF REVDAT 1 06-DEC-00 1FF3 0 JRNL AUTH F.TETE-FAVIER,D.COBESSI,S.BOSCHI-MULLER,S.AZZA, JRNL AUTH 2 G.BRANLANT,A.AUBRY JRNL TITL CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI PEPTIDE JRNL TITL 2 METHIONINE SULPHOXIDE REDUCTASE AT 1.9 A JRNL TITL 3 RESOLUTION. JRNL REF STRUCTURE FOLD.DES. V. 8 1167 2000 JRNL REFN ISSN 0969-2126 JRNL PMID 11080639 JRNL DOI 10.1016/S0969-2126(00)00526-8 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 63115 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 6375 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4603 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 530 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.33 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1FF3 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-AUG-00. REMARK 100 THE RCSB ID CODE IS RCSB011532. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-AUG-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9797 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64402 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.9 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.03500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 65.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.23500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.35 M AMMONIUM SULPHATE, 20 % PEG REMARK 280 8K, CACODYLATE BUFFER 0.1 M, PH 7.0, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 194.86667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 97.43333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 146.15000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 48.71667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 243.58333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 194.86667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 97.43333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 48.71667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 146.15000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 243.58333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 50300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -144.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 0.500000 0.866025 0.000000 51.25000 REMARK 350 BIOMT2 1 -0.866025 0.500000 0.000000 88.76760 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 48.71667 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 51.25000 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 88.76760 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 48.71667 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -120.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 51.25000 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 88.76760 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 48.71667 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -50.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR B 195 REMARK 465 GLY B 196 REMARK 465 TYR B 197 REMARK 465 CYS B 198 REMARK 465 GLY B 199 REMARK 465 ILE B 200 REMARK 465 GLY B 201 REMARK 465 GLY B 202 REMARK 465 ILE B 203 REMARK 465 GLY B 204 REMARK 465 VAL B 205 REMARK 465 CYS B 206 REMARK 465 LEU B 207 REMARK 465 PRO B 208 REMARK 465 PRO B 209 REMARK 465 GLU B 210 REMARK 465 ALA B 211 REMARK 465 SER C 1 REMARK 465 LEU C 2 REMARK 465 PHE C 3 REMARK 465 ASP C 4 REMARK 465 LYS C 5 REMARK 465 LYS C 6 REMARK 465 HIS C 7 REMARK 465 ASN C 193 REMARK 465 PRO C 194 REMARK 465 TYR C 195 REMARK 465 GLY C 196 REMARK 465 TYR C 197 REMARK 465 CYS C 198 REMARK 465 GLY C 199 REMARK 465 ILE C 200 REMARK 465 GLY C 201 REMARK 465 GLY C 202 REMARK 465 ILE C 203 REMARK 465 GLY C 204 REMARK 465 VAL C 205 REMARK 465 CYS C 206 REMARK 465 LEU C 207 REMARK 465 PRO C 208 REMARK 465 PRO C 209 REMARK 465 GLU C 210 REMARK 465 ALA C 211 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN B 128 O HOH B 724 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASP C 166 OD1 ASP C 166 8555 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 57 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 36 -38.57 -130.84 REMARK 500 ARG A 125 160.75 178.36 REMARK 500 TYR A 139 79.82 -118.55 REMARK 500 PRO A 194 39.71 -66.40 REMARK 500 LEU B 2 158.14 -49.74 REMARK 500 MET C 49 38.39 -146.54 REMARK 500 ARG C 125 163.72 176.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 57 0.10 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 533 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 534 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 535 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 536 DBREF 1FF3 A 1 211 UNP P0A744 MSRA_ECOLI 1 211 DBREF 1FF3 B 1 211 UNP P0A744 MSRA_ECOLI 1 211 DBREF 1FF3 C 1 211 UNP P0A744 MSRA_ECOLI 1 211 SEQADV 1FF3 CAS A 51 UNP P0A744 CYS 51 MODIFIED RESIDUE SEQADV 1FF3 CAS B 51 UNP P0A744 CYS 51 MODIFIED RESIDUE SEQADV 1FF3 CAS C 51 UNP P0A744 CYS 51 MODIFIED RESIDUE SEQRES 1 A 211 SER LEU PHE ASP LYS LYS HIS LEU VAL SER PRO ALA ASP SEQRES 2 A 211 ALA LEU PRO GLY ARG ASN THR PRO MET PRO VAL ALA THR SEQRES 3 A 211 LEU HIS ALA VAL ASN GLY HIS SER MET THR ASN VAL PRO SEQRES 4 A 211 ASP GLY MET GLU ILE ALA ILE PHE ALA MET GLY CAS PHE SEQRES 5 A 211 TRP GLY VAL GLU ARG LEU PHE TRP GLN LEU PRO GLY VAL SEQRES 6 A 211 TYR SER THR ALA ALA GLY TYR THR GLY GLY TYR THR PRO SEQRES 7 A 211 ASN PRO THR TYR ARG GLU VAL CYS SER GLY ASP THR GLY SEQRES 8 A 211 HIS ALA GLU ALA VAL ARG ILE VAL TYR ASP PRO SER VAL SEQRES 9 A 211 ILE SER TYR GLU GLN LEU LEU GLN VAL PHE TRP GLU ASN SEQRES 10 A 211 HIS ASP PRO ALA GLN GLY MET ARG GLN GLY ASN ASP HIS SEQRES 11 A 211 GLY THR GLN TYR ARG SER ALA ILE TYR PRO LEU THR PRO SEQRES 12 A 211 GLU GLN ASP ALA ALA ALA ARG ALA SER LEU GLU ARG PHE SEQRES 13 A 211 GLN ALA ALA MET LEU ALA ALA ASP ASP ASP ARG HIS ILE SEQRES 14 A 211 THR THR GLU ILE ALA ASN ALA THR PRO PHE TYR TYR ALA SEQRES 15 A 211 GLU ASP ASP HIS GLN GLN TYR LEU HIS LYS ASN PRO TYR SEQRES 16 A 211 GLY TYR CYS GLY ILE GLY GLY ILE GLY VAL CYS LEU PRO SEQRES 17 A 211 PRO GLU ALA SEQRES 1 B 211 SER LEU PHE ASP LYS LYS HIS LEU VAL SER PRO ALA ASP SEQRES 2 B 211 ALA LEU PRO GLY ARG ASN THR PRO MET PRO VAL ALA THR SEQRES 3 B 211 LEU HIS ALA VAL ASN GLY HIS SER MET THR ASN VAL PRO SEQRES 4 B 211 ASP GLY MET GLU ILE ALA ILE PHE ALA MET GLY CAS PHE SEQRES 5 B 211 TRP GLY VAL GLU ARG LEU PHE TRP GLN LEU PRO GLY VAL SEQRES 6 B 211 TYR SER THR ALA ALA GLY TYR THR GLY GLY TYR THR PRO SEQRES 7 B 211 ASN PRO THR TYR ARG GLU VAL CYS SER GLY ASP THR GLY SEQRES 8 B 211 HIS ALA GLU ALA VAL ARG ILE VAL TYR ASP PRO SER VAL SEQRES 9 B 211 ILE SER TYR GLU GLN LEU LEU GLN VAL PHE TRP GLU ASN SEQRES 10 B 211 HIS ASP PRO ALA GLN GLY MET ARG GLN GLY ASN ASP HIS SEQRES 11 B 211 GLY THR GLN TYR ARG SER ALA ILE TYR PRO LEU THR PRO SEQRES 12 B 211 GLU GLN ASP ALA ALA ALA ARG ALA SER LEU GLU ARG PHE SEQRES 13 B 211 GLN ALA ALA MET LEU ALA ALA ASP ASP ASP ARG HIS ILE SEQRES 14 B 211 THR THR GLU ILE ALA ASN ALA THR PRO PHE TYR TYR ALA SEQRES 15 B 211 GLU ASP ASP HIS GLN GLN TYR LEU HIS LYS ASN PRO TYR SEQRES 16 B 211 GLY TYR CYS GLY ILE GLY GLY ILE GLY VAL CYS LEU PRO SEQRES 17 B 211 PRO GLU ALA SEQRES 1 C 211 SER LEU PHE ASP LYS LYS HIS LEU VAL SER PRO ALA ASP SEQRES 2 C 211 ALA LEU PRO GLY ARG ASN THR PRO MET PRO VAL ALA THR SEQRES 3 C 211 LEU HIS ALA VAL ASN GLY HIS SER MET THR ASN VAL PRO SEQRES 4 C 211 ASP GLY MET GLU ILE ALA ILE PHE ALA MET GLY CAS PHE SEQRES 5 C 211 TRP GLY VAL GLU ARG LEU PHE TRP GLN LEU PRO GLY VAL SEQRES 6 C 211 TYR SER THR ALA ALA GLY TYR THR GLY GLY TYR THR PRO SEQRES 7 C 211 ASN PRO THR TYR ARG GLU VAL CYS SER GLY ASP THR GLY SEQRES 8 C 211 HIS ALA GLU ALA VAL ARG ILE VAL TYR ASP PRO SER VAL SEQRES 9 C 211 ILE SER TYR GLU GLN LEU LEU GLN VAL PHE TRP GLU ASN SEQRES 10 C 211 HIS ASP PRO ALA GLN GLY MET ARG GLN GLY ASN ASP HIS SEQRES 11 C 211 GLY THR GLN TYR ARG SER ALA ILE TYR PRO LEU THR PRO SEQRES 12 C 211 GLU GLN ASP ALA ALA ALA ARG ALA SER LEU GLU ARG PHE SEQRES 13 C 211 GLN ALA ALA MET LEU ALA ALA ASP ASP ASP ARG HIS ILE SEQRES 14 C 211 THR THR GLU ILE ALA ASN ALA THR PRO PHE TYR TYR ALA SEQRES 15 C 211 GLU ASP ASP HIS GLN GLN TYR LEU HIS LYS ASN PRO TYR SEQRES 16 C 211 GLY TYR CYS GLY ILE GLY GLY ILE GLY VAL CYS LEU PRO SEQRES 17 C 211 PRO GLU ALA MODRES 1FF3 CAS A 51 CYS S-(DIMETHYLARSENIC)CYSTEINE MODRES 1FF3 CAS B 51 CYS S-(DIMETHYLARSENIC)CYSTEINE MODRES 1FF3 CAS C 51 CYS S-(DIMETHYLARSENIC)CYSTEINE HET CAS A 51 9 HET CAS B 51 9 HET CAS C 51 9 HET SO4 A 533 5 HET SO4 A 534 5 HET SO4 A 535 5 HET SO4 B 536 5 HETNAM CAS S-(DIMETHYLARSENIC)CYSTEINE HETNAM SO4 SULFATE ION FORMUL 1 CAS 3(C5 H12 AS N O2 S) FORMUL 4 SO4 4(O4 S 2-) FORMUL 8 HOH *530(H2 O) HELIX 1 1 SER A 10 ALA A 14 5 5 HELIX 2 2 PHE A 52 GLN A 61 1 10 HELIX 3 3 THR A 81 GLY A 88 1 8 HELIX 4 4 SER A 106 ASN A 117 1 12 HELIX 5 5 THR A 132 ARG A 135 5 4 HELIX 6 6 THR A 142 ALA A 163 1 22 HELIX 7 7 GLU A 183 GLN A 187 5 5 HELIX 8 8 GLN A 188 ASN A 193 1 6 HELIX 9 9 ASP B 4 LEU B 8 5 5 HELIX 10 10 PHE B 52 GLN B 61 1 10 HELIX 11 11 THR B 81 GLY B 88 1 8 HELIX 12 12 SER B 106 ASN B 117 1 12 HELIX 13 13 THR B 132 TYR B 134 5 3 HELIX 14 14 THR B 142 ALA B 163 1 22 HELIX 15 15 GLU B 183 GLN B 187 5 5 HELIX 16 16 GLN B 188 ASN B 193 1 6 HELIX 17 17 PHE C 52 GLN C 61 1 10 HELIX 18 18 THR C 81 SER C 87 1 7 HELIX 19 19 SER C 106 ASN C 117 1 12 HELIX 20 20 THR C 132 TYR C 134 5 3 HELIX 21 21 THR C 142 ALA C 163 1 22 HELIX 22 22 GLU C 183 GLN C 187 5 5 SHEET 1 A 6 GLU A 172 ILE A 173 0 SHEET 2 A 6 ALA A 137 ILE A 138 1 N ILE A 138 O GLU A 172 SHEET 3 A 6 GLU A 43 ALA A 48 -1 N ALA A 48 O ALA A 137 SHEET 4 A 6 ALA A 93 TYR A 100 -1 N VAL A 96 O PHE A 47 SHEET 5 A 6 VAL A 65 THR A 73 -1 N TYR A 66 O VAL A 99 SHEET 6 A 6 PHE A 179 TYR A 181 -1 O TYR A 180 N TYR A 72 SHEET 1 B 2 ARG A 125 GLN A 126 0 SHEET 2 B 2 ASP A 129 HIS A 130 -1 O ASP A 129 N GLN A 126 SHEET 1 C 6 GLU B 172 ILE B 173 0 SHEET 2 C 6 SER B 136 ILE B 138 1 O SER B 136 N GLU B 172 SHEET 3 C 6 GLU B 43 MET B 49 -1 N ALA B 48 O ALA B 137 SHEET 4 C 6 ALA B 93 TYR B 100 -1 N VAL B 96 O PHE B 47 SHEET 5 C 6 VAL B 65 THR B 73 -1 N TYR B 66 O VAL B 99 SHEET 6 C 6 TYR B 180 TYR B 181 -1 O TYR B 180 N TYR B 72 SHEET 1 D 2 ARG B 125 GLN B 126 0 SHEET 2 D 2 ASP B 129 HIS B 130 -1 O ASP B 129 N GLN B 126 SHEET 1 E 6 GLU C 172 ILE C 173 0 SHEET 2 E 6 SER C 136 ILE C 138 1 O SER C 136 N GLU C 172 SHEET 3 E 6 GLU C 43 MET C 49 -1 O ALA C 48 N ALA C 137 SHEET 4 E 6 ALA C 93 TYR C 100 -1 N VAL C 96 O PHE C 47 SHEET 5 E 6 VAL C 65 THR C 73 -1 N TYR C 66 O VAL C 99 SHEET 6 E 6 TYR C 180 TYR C 181 -1 O TYR C 180 N TYR C 72 SHEET 1 F 2 ARG C 125 GLN C 126 0 SHEET 2 F 2 ASP C 129 HIS C 130 -1 O ASP C 129 N GLN C 126 SSBOND 1 CYS A 206 CYS B 86 1555 1555 2.03 LINK C GLY A 50 N CAS A 51 1555 1555 1.33 LINK C CAS A 51 N PHE A 52 1555 1555 1.33 LINK C GLY B 50 N CAS B 51 1555 1555 1.33 LINK C CAS B 51 N PHE B 52 1555 1555 1.33 LINK C GLY C 50 N CAS C 51 1555 1555 1.33 LINK AS CAS C 51 O HOH C 242 1555 1555 2.51 LINK C CAS C 51 N PHE C 52 1555 1555 1.33 SITE 1 AC1 4 THR A 81 ARG A 83 HOH A 602 HOH A 639 SITE 1 AC2 5 SER A 1 LYS A 5 LYS A 6 HIS A 7 SITE 2 AC2 5 HIS B 7 SITE 1 AC3 4 ARG A 18 ASN A 19 THR A 20 HOH A 759 SITE 1 AC4 3 ARG B 18 ASN B 19 THR B 20 CRYST1 102.500 102.500 292.300 90.00 90.00 120.00 P 65 2 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009756 0.005633 0.000000 0.00000 SCALE2 0.000000 0.011265 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003421 0.00000