PDB Full entry for 1G2J
HEADER    RNA                                     20-OCT-00   1G2J              
TITLE     RNA OCTAMER R(CCCP*GGGG) CONTAINING PHENYL RIBONUCLEOTIDE             
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: 5'-R(*CP*CP*CP*(PYY)P*GP*GP*GP*G)-3';                      
COMPND   3 CHAIN: A;                                                            
COMPND   4 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 SYNTHETIC: YES                                                       
KEYWDS    RNA DUPLEX, PHENYL-RIBONUCLEOTIDE, RNA                                
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    G.MINASOV,J.MATULIC-ADAMIC,C.J.WILDS,P.HAEBERLI,N.USMAN,L.BEIGELMAN,  
AUTHOR   2 M.EGLI                                                               
REVDAT   5   03-APR-24 1G2J    1       REMARK                                   
REVDAT   4   07-FEB-24 1G2J    1       REMARK LINK                              
REVDAT   3   24-FEB-09 1G2J    1       VERSN                                    
REVDAT   2   01-APR-03 1G2J    1       JRNL                                     
REVDAT   1   06-DEC-00 1G2J    0                                                
JRNL        AUTH   G.MINASOV,J.MATULIC-ADAMIC,C.J.WILDS,P.HAEBERLI,N.USMAN,     
JRNL        AUTH 2 L.BEIGELMAN,M.EGLI                                           
JRNL        TITL   CRYSTAL STRUCTURE OF AN RNA DUPLEX CONTAINING                
JRNL        TITL 2 PHENYL-RIBONUCLEOTIDES, HYDROPHOBIC ISOSTERES OF THE NATURAL 
JRNL        TITL 3 PYRIMIDINES.                                                 
JRNL        REF    RNA                           V.   6  1516 2000              
JRNL        REFN                   ISSN 1355-8382                               
JRNL        PMID   11105752                                                     
JRNL        DOI    10.1017/S1355838200001114                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.97 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS 0.9                                              
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,              
REMARK   3               : READ,RICE,SIMONSON,WARREN                            
REMARK   3                                                                      
REMARK   3  REFINEMENT TARGET : G. PARKINSON, J. VOJTECHOVSKY, L. CLOWNEY,      
REMARK   3                      A.T. BRUNGER, H.M. BERMAN, ACTA CRYST. D, 52,   
REMARK   3                      57-64 (1996).                                   
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 20.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : NULL                           
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : NULL                           
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 95.3                           
REMARK   3   NUMBER OF REFLECTIONS             : 1736                           
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE            (WORKING SET) : 0.217                           
REMARK   3   FREE R VALUE                     : 0.269                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : NULL                            
REMARK   3   FREE R VALUE TEST SET COUNT      : 185                             
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : NULL                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : NULL                         
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : NULL                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : NULL                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : NULL                         
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : NULL                         
REMARK   3   BIN R VALUE           (WORKING SET) : NULL                         
REMARK   3   BIN FREE R VALUE                    : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : NULL                         
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : NULL                         
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 0                                       
REMARK   3   NUCLEIC ACID ATOMS       : 167                                     
REMARK   3   HETEROGEN ATOMS          : 2                                       
REMARK   3   SOLVENT ATOMS            : 37                                      
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -17.63200                                            
REMARK   3    B22 (A**2) : -17.63200                                            
REMARK   3    B33 (A**2) : 35.26400                                             
REMARK   3    B12 (A**2) : -3.89000                                             
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : NULL                            
REMARK   3   ESD FROM SIGMAA              (A) : NULL                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : NULL                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : NULL                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : NULL                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.009                           
REMARK   3   BOND ANGLES            (DEGREES) : 1.400                           
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : 29.47                           
REMARK   3   IMPROPER ANGLES        (DEGREES) : 1.940                           
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : ISOTROPIC                                 
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : NULL                                                 
REMARK   3   KSOL        : NULL                                                 
REMARK   3   BSOL        : NULL                                                 
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: USED RESIDUAL TARGET                      
REMARK   4                                                                      
REMARK   4 1G2J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB.                                
REMARK 100 THE DEPOSITION ID IS D_1000012153.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 15-MAR-00                          
REMARK 200  TEMPERATURE           (KELVIN) : 100.0                              
REMARK 200  PH                             : 6.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 5ID-B                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.0000                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : MARRESEARCH                        
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DENZO                              
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 1904                               
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.970                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 20.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : -3.000                             
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.1                               
REMARK 200  DATA REDUNDANCY                : 13.60                              
REMARK 200  R MERGE                    (I) : 0.04600                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 20.5000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.04                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 99.5                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 11.50                              
REMARK 200  R MERGE FOR SHELL          (I) : 0.24300                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 17.30                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: AMORE                                                 
REMARK 200 STARTING MODEL: RNA TETRAMER DUPLEX                                  
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 41.21                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: OLIGONUCLEOTIDE, CALCIUM ACETATE,        
REMARK 280  SODIUM CACODYLATE, PEG 8000, PH 6.5, VAPOR DIFFUSION, HANGING       
REMARK 280  DROP, TEMPERATURE 277.0K                                            
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+1/3                                            
REMARK 290       3555   -X+Y,-X,Z+2/3                                           
REMARK 290       4555   -X,-Y,Z+1/2                                             
REMARK 290       5555   Y,-X+Y,Z+5/6                                            
REMARK 290       6555   X-Y,X,Z+1/6                                             
REMARK 290       7555   Y,X,-Z+1/3                                              
REMARK 290       8555   X-Y,-Y,-Z                                               
REMARK 290       9555   -X,-X+Y,-Z+2/3                                          
REMARK 290      10555   -Y,-X,-Z+5/6                                            
REMARK 290      11555   -X+Y,Y,-Z+1/2                                           
REMARK 290      12555   X,X-Y,-Z+1/6                                            
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       41.26333            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       82.52667            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000       61.89500            
REMARK 290   SMTRY1   5  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   5 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000      103.15833            
REMARK 290   SMTRY1   6  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000       20.63167            
REMARK 290   SMTRY1   7 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   7  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   7  0.000000  0.000000 -1.000000       41.26333            
REMARK 290   SMTRY1   8  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   8  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   8  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   9 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   9 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   9  0.000000  0.000000 -1.000000       82.52667            
REMARK 290   SMTRY1  10  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2  10 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3  10  0.000000  0.000000 -1.000000      103.15833            
REMARK 290   SMTRY1  11 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2  11  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3  11  0.000000  0.000000 -1.000000       61.89500            
REMARK 290   SMTRY1  12  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2  12  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3  12  0.000000  0.000000 -1.000000       20.63167            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350   BIOMT1   2  0.500000  0.866025  0.000000      -12.15500            
REMARK 350   BIOMT2   2  0.866025 -0.500000  0.000000       21.05308            
REMARK 350   BIOMT3   2  0.000000  0.000000 -1.000000       20.63167            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375 CA    CA A  14  LIES ON A SPECIAL POSITION.                          
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500      G A   7         0.05    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              CA A   9  CA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 PYY A   4   O1P                                                    
REMARK 620 2   G A   8   O3'  88.9                                              
REMARK 620 3   G A   8   O2' 113.7  71.2                                        
REMARK 620 4 HOH A  10   O   166.9  82.0  72.2                                  
REMARK 620 5 HOH A  11   O    92.7 145.9 137.0  89.7                            
REMARK 620 6 HOH A  12   O   100.8 137.9  67.4  92.3  75.0                      
REMARK 620 7 HOH A  13   O    84.9  76.6 141.9  83.8  69.7 144.5                
REMARK 620 N                    1     2     3     4     5     6                 
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              CA A  14  CA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1   G A   8   OP1                                                    
REMARK 620 2   G A   8   OP1  82.5                                              
REMARK 620 3 HOH A  15   O    91.4 173.2                                        
REMARK 620 4 HOH A  15   O   173.4  91.7  94.5                                  
REMARK 620 5 HOH A  16   O    92.5  91.4  85.9  90.7                            
REMARK 620 6 HOH A  16   O    91.2  92.6  90.5  86.0 174.9                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 9                    
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 14                   
DBREF  1G2J A    1     8  PDB    1G2J     1G2J             1      8             
SEQRES   1 A    8    C   C   C PYY   G   G   G   G                              
HET    PYY  A   4      18                                                       
HET     CA  A   9       1                                                       
HET     CA  A  14       1                                                       
HETNAM     PYY D-RIBOFURANOSYL-BENZENE-5'-MONOPHOSPHATE                         
HETNAM      CA CALCIUM ION                                                      
FORMUL   1  PYY    C11 H15 O7 P                                                 
FORMUL   2   CA    2(CA 2+)                                                     
FORMUL   4  HOH   *37(H2 O)                                                     
LINK         O3'   C A   3                 P   PYY A   4     1555   1555  1.61  
LINK         O3' PYY A   4                 P     G A   5     1555   1555  1.60  
LINK         O1P PYY A   4                CA    CA A   9     1565   1555  2.58  
LINK         O3'   G A   8                CA    CA A   9     1555   1555  2.28  
LINK         O2'   G A   8                CA    CA A   9     1555   1555  2.54  
LINK         OP1   G A   8                CA    CA A  14     1555   1555  2.37  
LINK         OP1   G A   8                CA    CA A  14     8675   1555  2.36  
LINK        CA    CA A   9                 O   HOH A  10     1555   1555  2.42  
LINK        CA    CA A   9                 O   HOH A  11     1555   1555  2.33  
LINK        CA    CA A   9                 O   HOH A  12     1555   1555  2.59  
LINK        CA    CA A   9                 O   HOH A  13     1555   1555  2.46  
LINK        CA    CA A  14                 O   HOH A  15     1555   1555  2.65  
LINK        CA    CA A  14                 O   HOH A  15     1555   8675  2.65  
LINK        CA    CA A  14                 O   HOH A  16     1555   1555  2.27  
LINK        CA    CA A  14                 O   HOH A  16     1555   8675  2.27  
SITE     1 AC1  6 PYY A   4    G A   8  HOH A  10  HOH A  11                    
SITE     2 AC1  6 HOH A  12  HOH A  13                                          
SITE     1 AC2  3   G A   8  HOH A  15  HOH A  16                               
CRYST1   24.310   24.310  123.790  90.00  90.00 120.00 P 61 2 2     12          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.041135  0.023749  0.000000        0.00000                         
SCALE2      0.000000  0.047499  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.008078        0.00000                         
ATOM      1  O5'   C A   1       5.000   9.659  14.120  1.00 71.01           O  
ATOM      2  C5'   C A   1       6.230   9.076  13.648  1.00 65.37           C  
ATOM      3  C4'   C A   1       6.256   7.565  13.498  1.00 62.70           C  
ATOM      4  O4'   C A   1       5.978   6.922  14.769  1.00 63.24           O  
ATOM      5  C3'   C A   1       5.270   6.932  12.533  1.00 59.61           C  
ATOM      6  O3'   C A   1       5.772   6.977  11.230  1.00 55.75           O  
ATOM      7  C2'   C A   1       5.174   5.502  13.048  1.00 60.60           C  
ATOM      8  O2'   C A   1       6.295   4.705  12.668  1.00 61.45           O  
ATOM      9  C1'   C A   1       5.219   5.737  14.557  1.00 59.75           C  
ATOM     10  N1    C A   1       3.886   5.977  15.140  1.00 56.14           N  
ATOM     11  C2    C A   1       2.985   4.918  15.278  1.00 54.98           C  
ATOM     12  O2    C A   1       3.323   3.772  14.899  1.00 53.34           O  
ATOM     13  N3    C A   1       1.772   5.167  15.829  1.00 53.39           N  
ATOM     14  C4    C A   1       1.461   6.404  16.236  1.00 54.90           C  
ATOM     15  N4    C A   1       0.270   6.610  16.788  1.00 56.07           N  
ATOM     16  C5    C A   1       2.357   7.486  16.098  1.00 55.18           C  
ATOM     17  C6    C A   1       3.541   7.234  15.548  1.00 55.50           C  
ATOM     18  P     C A   2       4.833   7.499  10.049  1.00 56.02           P  
ATOM     19  OP1   C A   2       5.734   7.847   8.909  1.00 57.13           O  
ATOM     20  OP2   C A   2       3.899   8.537  10.603  1.00 49.30           O  
ATOM     21  O5'   C A   2       3.990   6.197   9.659  1.00 57.78           O  
ATOM     22  C5'   C A   2       4.631   4.946   9.308  1.00 51.64           C  
ATOM     23  C4'   C A   2       3.594   3.843   9.216  1.00 51.03           C  
ATOM     24  O4'   C A   2       3.191   3.418  10.550  1.00 49.72           O  
ATOM     25  C3'   C A   2       2.286   4.220   8.532  1.00 49.54           C  
ATOM     26  O3'   C A   2       2.356   4.211   7.098  1.00 52.85           O  
ATOM     27  C2'   C A   2       1.317   3.193   9.111  1.00 48.84           C  
ATOM     28  O2'   C A   2       1.400   1.925   8.479  1.00 47.19           O  
ATOM     29  C1'   C A   2       1.813   3.083  10.555  1.00 48.37           C  
ATOM     30  N1    C A   2       1.105   4.034  11.441  1.00 46.30           N  
ATOM     31  C2    C A   2      -0.197   3.719  11.884  1.00 45.82           C  
ATOM     32  O2    C A   2      -0.681   2.623  11.608  1.00 44.78           O  
ATOM     33  N3    C A   2      -0.884   4.621  12.606  1.00 44.78           N  
ATOM     34  C4    C A   2      -0.331   5.796  12.905  1.00 44.78           C  
ATOM     35  N4    C A   2      -1.078   6.672  13.568  1.00 45.59           N  
ATOM     36  C5    C A   2       1.005   6.125  12.521  1.00 44.68           C  
ATOM     37  C6    C A   2       1.682   5.220  11.801  1.00 44.34           C  
ATOM     38  P     C A   3       1.455   5.255   6.244  1.00 52.98           P  
ATOM     39  OP1   C A   3       1.833   5.170   4.810  1.00 56.94           O  
ATOM     40  OP2   C A   3       1.448   6.582   6.916  1.00 57.12           O  
ATOM     41  O5'   C A   3      -0.019   4.658   6.351  1.00 49.61           O  
ATOM     42  C5'   C A   3      -0.316   3.391   5.788  1.00 40.71           C  
ATOM     43  C4'   C A   3      -1.738   3.044   6.059  1.00 38.49           C  
ATOM     44  O4'   C A   3      -1.915   2.895   7.479  1.00 37.45           O  
ATOM     45  C3'   C A   3      -2.768   4.094   5.707  1.00 38.93           C  
ATOM     46  O3'   C A   3      -3.117   4.117   4.342  1.00 45.48           O  
ATOM     47  C2'   C A   3      -3.943   3.647   6.546  1.00 38.54           C  
ATOM     48  O2'   C A   3      -4.568   2.505   5.986  1.00 38.45           O  
ATOM     49  C1'   C A   3      -3.239   3.248   7.829  1.00 36.59           C  
ATOM     50  N1    C A   3      -3.210   4.373   8.777  1.00 36.34           N  
ATOM     51  C2    C A   3      -4.353   4.634   9.545  1.00 36.71           C  
ATOM     52  O2    C A   3      -5.338   3.889   9.434  1.00 39.00           O  
ATOM     53  N3    C A   3      -4.357   5.679  10.388  1.00 36.65           N  
ATOM     54  C4    C A   3      -3.279   6.446  10.494  1.00 36.96           C  
ATOM     55  N4    C A   3      -3.340   7.482  11.322  1.00 39.81           N  
ATOM     56  C5    C A   3      -2.096   6.191   9.754  1.00 36.90           C  
ATOM     57  C6    C A   3      -2.104   5.156   8.910  1.00 36.71           C  
HETATM   58  P   PYY A   4      -3.671   5.481   3.700  1.00 45.49           P  
HETATM   59  O1P PYY A   4      -3.524   5.383   2.223  1.00 49.15           O  
HETATM   60  O2P PYY A   4      -3.023   6.608   4.435  1.00 50.49           O  
HETATM   61  O5' PYY A   4      -5.230   5.499   4.067  1.00 53.56           O  
HETATM   62  C5' PYY A   4      -6.121   4.485   3.561  1.00 53.22           C  
HETATM   63  C4' PYY A   4      -7.311   4.262   4.491  1.00 54.20           C  
HETATM   64  O4' PYY A   4      -6.912   4.203   5.889  1.00 51.81           O  
HETATM   65  C1' PYY A   4      -7.988   4.635   6.710  1.00 51.85           C  
HETATM   66  C1  PYY A   4      -7.675   5.893   7.477  1.00 50.11           C  
HETATM   67  C6  PYY A   4      -6.465   6.548   7.289  1.00 49.00           C  
HETATM   68  C2  PYY A   4      -8.597   6.408   8.375  1.00 49.24           C  
HETATM   69  C3  PYY A   4      -8.313   7.569   9.091  1.00 49.22           C  
HETATM   70  C4  PYY A   4      -7.104   8.210   8.902  1.00 48.12           C  
HETATM   71  C5  PYY A   4      -6.173   7.691   7.988  1.00 48.56           C  
HETATM   72  C2' PYY A   4      -9.162   4.943   5.792  1.00 55.15           C  
HETATM   73  O2' PYY A   4     -10.017   3.809   5.698  1.00 56.55           O  
HETATM   74  C3' PYY A   4      -8.439   5.274   4.492  1.00 53.69           C  
HETATM   75  O3' PYY A   4      -9.297   5.121   3.387  1.00 53.85           O  
ATOM     76  P     G A   5      -9.777   6.428   2.593  1.00 57.14           P  
ATOM     77  OP1   G A   5     -10.201   5.968   1.215  1.00 57.88           O  
ATOM     78  OP2   G A   5      -8.653   7.416   2.735  1.00 60.85           O  
ATOM     79  O5'   G A   5     -11.016   6.980   3.451  1.00 51.82           O  
ATOM     80  C5'   G A   5     -12.128   6.130   3.792  1.00 46.08           C  
ATOM     81  C4'   G A   5     -12.887   6.686   4.976  1.00 45.75           C  
ATOM     82  O4'   G A   5     -12.073   6.633   6.183  1.00 46.49           O  
ATOM     83  C3'   G A   5     -13.322   8.137   4.897  1.00 46.21           C  
ATOM     84  O3'   G A   5     -14.492   8.356   4.126  1.00 44.81           O  
ATOM     85  C2'   G A   5     -13.554   8.462   6.362  1.00 47.79           C  
ATOM     86  O2'   G A   5     -14.788   7.938   6.820  1.00 53.78           O  
ATOM     87  C1'   G A   5     -12.385   7.730   7.020  1.00 45.03           C  
ATOM     88  N9    G A   5     -11.243   8.639   7.035  1.00 43.63           N  
ATOM     89  C8    G A   5     -10.097   8.548   6.292  1.00 42.87           C  
ATOM     90  N7    G A   5      -9.288   9.557   6.474  1.00 43.89           N  
ATOM     91  C5    G A   5      -9.928  10.351   7.419  1.00 41.93           C  
ATOM     92  C6    G A   5      -9.526  11.577   8.023  1.00 42.01           C  
ATOM     93  O6    G A   5      -8.485  12.210   7.850  1.00 43.17           O  
ATOM     94  N1    G A   5     -10.487  12.057   8.913  1.00 41.77           N  
ATOM     95  C2    G A   5     -11.685  11.434   9.188  1.00 44.52           C  
ATOM     96  N2    G A   5     -12.516  12.051  10.056  1.00 44.90           N  
ATOM     97  N3    G A   5     -12.054  10.282   8.645  1.00 45.17           N  
ATOM     98  C4    G A   5     -11.133   9.802   7.776  1.00 43.50           C  
ATOM     99  P     G A   6     -14.611   9.695   3.252  1.00 43.54           P  
ATOM    100  OP1   G A   6     -15.737   9.500   2.334  1.00 46.23           O  
ATOM    101  OP2   G A   6     -13.284  10.075   2.704  1.00 41.89           O  
ATOM    102  O5'   G A   6     -15.026  10.795   4.327  1.00 45.65           O  
ATOM    103  C5'   G A   6     -16.167  10.599   5.183  1.00 44.31           C  
ATOM    104  C4'   G A   6     -16.313  11.764   6.127  1.00 44.09           C  
ATOM    105  O4'   G A   6     -15.262  11.697   7.130  1.00 46.93           O  
ATOM    106  C3'   G A   6     -16.133  13.148   5.515  1.00 45.08           C  
ATOM    107  O3'   G A   6     -17.245  13.650   4.794  1.00 46.88           O  
ATOM    108  C2'   G A   6     -15.748  13.981   6.728  1.00 44.12           C  
ATOM    109  O2'   G A   6     -16.839  14.242   7.586  1.00 43.50           O  
ATOM    110  C1'   G A   6     -14.813  13.014   7.440  1.00 46.22           C  
ATOM    111  N9    G A   6     -13.469  13.193   6.895  1.00 44.01           N  
ATOM    112  C8    G A   6     -12.797  12.374   6.015  1.00 42.25           C  
ATOM    113  N7    G A   6     -11.604  12.811   5.719  1.00 41.96           N  
ATOM    114  C5    G A   6     -11.482  13.986   6.450  1.00 41.93           C  
ATOM    115  C6    G A   6     -10.379  14.902   6.569  1.00 43.08           C  
ATOM    116  O6    G A   6      -9.253  14.857   6.022  1.00 43.29           O  
ATOM    117  N1    G A   6     -10.691  15.950   7.436  1.00 43.28           N  
ATOM    118  C2    G A   6     -11.891  16.095   8.103  1.00 42.11           C  
ATOM    119  N2    G A   6     -11.993  17.162   8.895  1.00 40.42           N  
ATOM    120  N3    G A   6     -12.908  15.257   7.998  1.00 41.01           N  
ATOM    121  C4    G A   6     -12.634  14.236   7.168  1.00 41.01           C  
ATOM    122  P     G A   7     -16.988  14.516   3.453  1.00 47.81           P  
ATOM    123  OP1   G A   7     -18.323  14.807   2.848  1.00 51.55           O  
ATOM    124  OP2   G A   7     -15.922  13.888   2.631  1.00 46.43           O  
ATOM    125  O5'   G A   7     -16.456  15.904   3.993  1.00 42.77           O  
ATOM    126  C5'   G A   7     -17.257  16.615   4.917  1.00 45.06           C  
ATOM    127  C4'   G A   7     -16.569  17.859   5.361  1.00 42.60           C  
ATOM    128  O4'   G A   7     -15.462  17.525   6.232  1.00 44.62           O  
ATOM    129  C3'   G A   7     -15.934  18.701   4.277  1.00 43.89           C  
ATOM    130  O3'   G A   7     -16.850  19.496   3.550  1.00 43.72           O  
ATOM    131  C2'   G A   7     -14.984  19.547   5.093  1.00 43.51           C  
ATOM    132  O2'   G A   7     -15.725  20.573   5.719  1.00 48.04           O  
ATOM    133  C1'   G A   7     -14.461  18.514   6.100  1.00 44.16           C  
ATOM    134  N9    G A   7     -13.258  17.900   5.536  1.00 43.61           N  
ATOM    135  C8    G A   7     -13.138  16.707   4.847  1.00 42.37           C  
ATOM    136  N7    G A   7     -11.955  16.540   4.319  1.00 40.48           N  
ATOM    137  C5    G A   7     -11.235  17.660   4.731  1.00 41.51           C  
ATOM    138  C6    G A   7      -9.897  18.048   4.467  1.00 42.97           C  
ATOM    139  O6    G A   7      -9.030  17.432   3.819  1.00 44.03           O  
ATOM    140  N1    G A   7      -9.597  19.288   5.053  1.00 41.47           N  
ATOM    141  C2    G A   7     -10.467  20.044   5.812  1.00 38.58           C  
ATOM    142  N2    G A   7     -10.019  21.206   6.269  1.00 37.81           N  
ATOM    143  N3    G A   7     -11.694  19.680   6.089  1.00 39.67           N  
ATOM    144  C4    G A   7     -12.018  18.490   5.510  1.00 41.85           C  
ATOM    145  P     G A   8     -16.606  19.726   1.977  1.00 41.27           P  
ATOM    146  OP1   G A   8     -17.781  20.462   1.442  1.00 44.21           O  
ATOM    147  OP2   G A   8     -16.230  18.412   1.357  1.00 40.48           O  
ATOM    148  O5'   G A   8     -15.369  20.734   1.966  1.00 39.72           O  
ATOM    149  C5'   G A   8     -15.471  22.004   2.623  1.00 36.09           C  
ATOM    150  C4'   G A   8     -14.145  22.711   2.605  1.00 34.85           C  
ATOM    151  O4'   G A   8     -13.161  21.932   3.303  1.00 38.24           O  
ATOM    152  C3'   G A   8     -13.501  22.960   1.261  1.00 35.37           C  
ATOM    153  O3'   G A   8     -14.072  23.976   0.488  1.00 42.35           O  
ATOM    154  C2'   G A   8     -12.054  23.207   1.631  1.00 38.18           C  
ATOM    155  O2'   G A   8     -11.847  24.509   2.132  1.00 44.18           O  
ATOM    156  C1'   G A   8     -11.879  22.227   2.782  1.00 38.64           C  
ATOM    157  N9    G A   8     -11.291  20.998   2.285  1.00 40.36           N  
ATOM    158  C8    G A   8     -11.937  19.826   1.989  1.00 41.20           C  
ATOM    159  N7    G A   8     -11.142  18.913   1.503  1.00 41.98           N  
ATOM    160  C5    G A   8      -9.890  19.518   1.493  1.00 42.51           C  
ATOM    161  C6    G A   8      -8.624  19.021   1.053  1.00 43.12           C  
ATOM    162  O6    G A   8      -8.359  17.907   0.567  1.00 45.17           O  
ATOM    163  N1    G A   8      -7.612  19.977   1.211  1.00 42.76           N  
ATOM    164  C2    G A   8      -7.795  21.252   1.713  1.00 43.83           C  
ATOM    165  N2    G A   8      -6.702  22.042   1.755  1.00 45.82           N  
ATOM    166  N3    G A   8      -8.971  21.723   2.131  1.00 43.99           N  
ATOM    167  C4    G A   8      -9.967  20.804   1.988  1.00 42.72           C  
TER     168        G A   8                                                      
HETATM  169 CA    CA A   9     -13.443  26.117   0.976  1.00 46.13          CA  
HETATM  170 CA    CA A  14     -19.558  21.054  -0.004  0.50 46.62          CA  
HETATM  171  O   HOH A  10     -11.668  25.589  -0.581  1.00 45.61           O  
HETATM  172  O   HOH A  11     -13.404  28.332   0.249  1.00 54.06           O  
HETATM  173  O   HOH A  12     -11.810  27.323   2.590  1.00 51.95           O  
HETATM  174  O   HOH A  13     -14.796  26.371  -1.066  1.00 44.14           O  
HETATM  175  O   HOH A  15     -21.356  20.187   1.743  1.00 59.55           O  
HETATM  176  O   HOH A  16     -19.660  18.967  -0.897  1.00 53.76           O  
HETATM  177  O   HOH A  17      -4.343  19.471   1.011  1.00 50.90           O  
HETATM  178  O   HOH A  18     -15.537  16.491   9.776  1.00 57.26           O  
HETATM  179  O   HOH A  19     -12.928  12.823   1.938  1.00 47.65           O  
HETATM  180  O   HOH A  20       7.401   5.857  10.055  1.00 53.93           O  
HETATM  181  O   HOH A  21       4.017   3.684   4.718  1.00 60.11           O  
HETATM  182  O   HOH A  22      -9.324  24.329   2.654  1.00 43.99           O  
HETATM  183  O   HOH A  23     -12.993   7.945  10.792  1.00 55.17           O  
HETATM  184  O   HOH A  24      -0.224  -0.433  11.462  1.00 51.11           O  
HETATM  185  O   HOH A  25     -17.699  17.195  -0.456  1.00 36.92           O  
HETATM  186  O  AHOH A  26      -8.676  13.405   1.967  0.65 38.48           O  
HETATM  187  O  BHOH A  26      -8.750  14.957   3.122  0.35 33.59           O  
HETATM  188  O   HOH A  27      -3.500  11.632  12.211  0.50 65.02           O  
HETATM  189  O  AHOH A  28      -6.156  15.349   0.065  0.50 39.93           O  
HETATM  190  O  BHOH A  28      -4.008  14.403  -0.475  0.50 47.29           O  
HETATM  191  O   HOH A  29     -20.594  18.483   3.220  0.50 33.60           O  
HETATM  192  O   HOH A  30      -1.002  11.261   9.103  0.50 37.00           O  
HETATM  193  O  AHOH A  31      -1.503  10.120  13.655  0.50 50.24           O  
HETATM  194  O  BHOH A  31      -1.332   9.600  11.439  0.50 36.56           O  
HETATM  195  O   HOH A  32      -6.144   8.731   1.064  0.50 40.84           O  
HETATM  196  O   HOH A  33     -11.359   7.709  -1.388  0.50 74.29           O  
HETATM  197  O   HOH A  34     -16.776  16.026  12.140  0.50 42.97           O  
HETATM  198  O   HOH A  35     -19.856  15.567   0.841  0.50 41.46           O  
HETATM  199  O   HOH A  36      -6.844  24.826   2.542  0.50 38.55           O  
HETATM  200  O  AHOH A  37       5.608  10.864  17.226  0.50 38.41           O  
HETATM  201  O  BHOH A  37       5.348   9.268  18.259  0.50 35.19           O  
HETATM  202  O   HOH A  38     -18.709  21.356   6.880  0.50 45.87           O  
HETATM  203  O  AHOH A  39       3.639   6.326   3.248  0.30 19.89           O  
HETATM  204  O  BHOH A  39       5.204   6.884   4.503  0.30 39.99           O  
HETATM  205  O  CHOH A  39       3.554   5.911   1.496  0.40 28.55           O  
HETATM  206  O   HOH A  40      -3.461   8.494   8.387  0.50 44.43           O  
HETATM  207  O   HOH A  41     -17.262  12.727  11.455  0.50 40.49           O  
HETATM  208  O   HOH A  42     -11.324  14.619   2.309  0.50 34.63           O  
HETATM  209  O   HOH A  43      -1.206   8.395   6.755  0.50 34.10           O  
HETATM  210  O   HOH A  44       4.221   9.336   6.352  0.50 43.47           O  
HETATM  211  O  AHOH A  45     -19.054  22.290   3.712  0.40 30.91           O  
HETATM  212  O  BHOH A  45     -20.142  21.560   5.057  0.60 37.82           O  
HETATM  213  O  AHOH A  46     -12.170   4.302   8.064  0.50 25.47           O  
HETATM  214  O  BHOH A  46     -14.604  10.082  10.606  0.50 45.54           O  
HETATM  215  O   HOH A  47       8.212   6.229  13.952  0.50 52.33           O  
CONECT   46   58                                                                
CONECT   58   46   59   60   61                                                 
CONECT   59   58                                                                
CONECT   60   58                                                                
CONECT   61   58   62                                                           
CONECT   62   61   63                                                           
CONECT   63   62   64   74                                                      
CONECT   64   63   65                                                           
CONECT   65   64   66   72                                                      
CONECT   66   65   67   68                                                      
CONECT   67   66   71                                                           
CONECT   68   66   69                                                           
CONECT   69   68   70                                                           
CONECT   70   69   71                                                           
CONECT   71   67   70                                                           
CONECT   72   65   73   74                                                      
CONECT   73   72                                                                
CONECT   74   63   72   75                                                      
CONECT   75   74   76                                                           
CONECT   76   75                                                                
CONECT  146  170                                                                
CONECT  153  169                                                                
CONECT  155  169                                                                
CONECT  169  153  155  171  172                                                 
CONECT  169  173  174                                                           
CONECT  170  146  175  176                                                      
CONECT  171  169                                                                
CONECT  172  169                                                                
CONECT  173  169                                                                
CONECT  174  169                                                                
CONECT  175  170                                                                
CONECT  176  170                                                                
MASTER      306    0    3    0    0    0    3    6  206    1   32    1          
END