PDB Short entry for 1GLB HEADER PHOSPHOTRANSFERASE 28-OCT-92 1GLB TITLE STRUCTURE OF THE REGULATORY COMPLEX OF ESCHERICHIA COLI IIIGLC WITH TITLE 2 GLYCEROL KINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSE-SPECIFIC PROTEIN IIIGLC; COMPND 3 CHAIN: F; COMPND 4 EC: 2.7.1.69; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: GLYCEROL KINASE; COMPND 8 CHAIN: G; COMPND 9 EC: 2.7.1.30; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 6 ORGANISM_TAXID: 562 KEYWDS PHOSPHOTRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.H.HURLEY,D.WORTHYLAKE,H.R.FABER,N.D.MEADOW,S.ROSEMAN,D.W.PETTIGREW, AUTHOR 2 S.J.REMINGTON REVDAT 5 07-FEB-24 1GLB 1 REMARK REVDAT 4 29-NOV-17 1GLB 1 HELIX REVDAT 3 13-JUL-11 1GLB 1 VERSN REVDAT 2 24-FEB-09 1GLB 1 VERSN REVDAT 1 31-OCT-93 1GLB 0 JRNL AUTH J.H.HURLEY,H.R.FABER,D.WORTHYLAKE,N.D.MEADOW,S.ROSEMAN, JRNL AUTH 2 D.W.PETTIGREW,S.J.REMINGTON JRNL TITL STRUCTURE OF THE REGULATORY COMPLEX OF ESCHERICHIA COLI JRNL TITL 2 IIIGLC WITH GLYCEROL KINASE. JRNL REF SCIENCE V. 259 673 1993 JRNL REFN ISSN 0036-8075 JRNL PMID 8430315 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4985 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.013 REMARK 3 BOND ANGLES (DEGREES) : 3.100 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1GLB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000173597. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 61.85000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 62.45000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 67.10000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 61.85000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 62.45000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 67.10000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 61.85000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 62.45000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 67.10000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 61.85000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 62.45000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 67.10000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: GLYCEROL KINASE EXISTS AT PHYSIOLOGICAL CONCENTRATIONS IN REMARK 300 AN EQUILIBRIUM BETWEEN FUNCTIONAL DIMERS AND TETRAMERS. REMARK 300 THE CRYSTAL CONTAINS TETRAMERS OF GLYCEROL-GLUCOSE-SPECIFIC REMARK 300 FACTOR III COMPLEX KINASE WITH EXACT 222 POINT-GROUP REMARK 300 SYMMETRY. THE TETRAMER IS LOCATED AT THE INTERSECTION REMARK 300 OF THREE TWO-FOLD AXES IN THE CRYSTAL LATTICE. THE REMARK 300 FOLLOWING TRANSFORMATIONS WILL PRODUCE A TETRAMER OF THE REMARK 300 COMPLEX WHEN APPLIED TO THE COORDINATES IN THIS ENTRY: REMARK 300 REMARK 300 TRANSFORM 1 (-X, 1-Y, Z) REMARK 300 -1.0 0.0 0.0 0.0 REMARK 300 0.0 -1.0 0.0 124.90 REMARK 300 0.0 0.0 1.0 0.0 REMARK 300 REMARK 300 TRANSFORM 2 (X, 1-Y, -Z) REMARK 300 1.0 0.0 0.0 0.0 REMARK 300 0.0 -1.0 0.0 124.90 REMARK 300 0.0 0.0 -1.0 0.0 REMARK 300 REMARK 300 TRANSFORM 3 (-X, Y, -Z) REMARK 300 -1.0 0.0 0.0 0.0 REMARK 300 0.0 1.0 0.0 0.0 REMARK 300 0.0 0.0 -1.0 0.0 REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 124.90000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 124.90000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP F 13 REMARK 465 LYS F 14 REMARK 465 LYS F 15 REMARK 465 ASP F 16 REMARK 465 THR F 17 REMARK 465 GLY F 18 REMARK 465 THR G 1 REMARK 465 GLU G 2 REMARK 465 LYS G 3 REMARK 465 GLY G 231 REMARK 465 LYS G 232 REMARK 465 GLY G 233 REMARK 465 GLY G 234 REMARK 465 THR G 235 REMARK 465 ARG G 236 REMARK 465 ASP G 500 REMARK 465 GLU G 501 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU F 2 CG CD1 CD2 REMARK 470 LYS F 5 CG CD CE NZ REMARK 470 LYS F 7 CG CD CE NZ REMARK 470 SER F 11 OG REMARK 470 ASP F 12 CA C O CB CG OD1 OD2 REMARK 470 LYS F 114 CB CG CD CE NZ REMARK 470 LYS F 132 CG CD CE NZ REMARK 470 LYS G 4 CG CD CE NZ REMARK 470 ILE G 28 CG1 CG2 CD1 REMARK 470 LYS G 91 CG CD CE NZ REMARK 470 GLU G 92 CG CD OE1 OE2 REMARK 470 ARG G 157 CG CD NE CZ NH1 NH2 REMARK 470 GLN G 175 CG CD OE1 NE2 REMARK 470 ARG G 177 CG CD NE CZ NH1 NH2 REMARK 470 LYS G 202 CG CD CE NZ REMARK 470 ILE G 229 CG1 CG2 CD1 REMARK 470 GLY G 230 CA C O REMARK 470 ILE G 237 CG1 CG2 CD1 REMARK 470 LYS G 281 CG CD CE NZ REMARK 470 TYR G 327 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG G 436 CG CD NE CZ NH1 NH2 REMARK 470 GLU G 437 CG CD OE1 OE2 REMARK 470 GLN G 455 CG CD OE1 NE2 REMARK 470 GLU G 459 CG CD OE1 OE2 REMARK 470 LYS G 463 CG CD CE NZ REMARK 470 ARG G 471 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS F 75 NE2 HIS F 75 CD2 -0.071 REMARK 500 HIS F 90 NE2 HIS F 90 CD2 -0.067 REMARK 500 HIS G 23 NE2 HIS G 23 CD2 -0.066 REMARK 500 HIS G 47 NE2 HIS G 47 CD2 -0.070 REMARK 500 HIS G 114 NE2 HIS G 114 CD2 -0.068 REMARK 500 HIS G 147 NE2 HIS G 147 CD2 -0.073 REMARK 500 HIS G 195 NE2 HIS G 195 CD2 -0.068 REMARK 500 HIS G 375 NE2 HIS G 375 CD2 -0.078 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN F 57 N - CA - C ANGL. DEV. = 19.3 DEGREES REMARK 500 ARG F 165 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 TRP G 44 CD1 - CG - CD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 TRP G 44 CE2 - CD2 - CG ANGL. DEV. = -5.2 DEGREES REMARK 500 TRP G 53 CD1 - CG - CD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 TRP G 53 CE2 - CD2 - CG ANGL. DEV. = -5.7 DEGREES REMARK 500 ARG G 83 NE - CZ - NH1 ANGL. DEV. = 4.9 DEGREES REMARK 500 ARG G 83 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 TRP G 89 CD1 - CG - CD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 TRP G 89 CE2 - CD2 - CG ANGL. DEV. = -5.6 DEGREES REMARK 500 TRP G 103 CD1 - CG - CD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 TRP G 103 CE2 - CD2 - CG ANGL. DEV. = -5.8 DEGREES REMARK 500 ARG G 106 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG G 107 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 TYR G 135 CB - CG - CD2 ANGL. DEV. = -3.6 DEGREES REMARK 500 TRP G 143 CD1 - CG - CD2 ANGL. DEV. = 5.2 DEGREES REMARK 500 TRP G 143 CE2 - CD2 - CG ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG G 156 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 TRP G 168 CD1 - CG - CD2 ANGL. DEV. = 5.3 DEGREES REMARK 500 TRP G 168 CE2 - CD2 - CG ANGL. DEV. = -5.5 DEGREES REMARK 500 TRP G 171 CD1 - CG - CD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 TRP G 171 CE2 - CD2 - CG ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG G 188 NE - CZ - NH1 ANGL. DEV. = 5.5 DEGREES REMARK 500 TRP G 199 CD1 - CG - CD2 ANGL. DEV. = 7.0 DEGREES REMARK 500 TRP G 199 CE2 - CD2 - CG ANGL. DEV. = -6.3 DEGREES REMARK 500 MET G 308 N - CA - CB ANGL. DEV. = -10.8 DEGREES REMARK 500 TRP G 315 CD1 - CG - CD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 TRP G 315 CE2 - CD2 - CG ANGL. DEV. = -5.8 DEGREES REMARK 500 ARG G 317 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 TRP G 356 CD1 - CG - CD2 ANGL. DEV. = 5.2 DEGREES REMARK 500 TRP G 356 CE2 - CD2 - CG ANGL. DEV. = -5.2 DEGREES REMARK 500 ARG G 361 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG G 389 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG G 407 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 TYR G 445 CB - CG - CD2 ANGL. DEV. = -5.0 DEGREES REMARK 500 TRP G 454 CD1 - CG - CD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 TRP G 454 CE2 - CD2 - CG ANGL. DEV. = -5.7 DEGREES REMARK 500 TRP G 486 CD1 - CG - CD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 TRP G 486 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 TRP G 496 CD1 - CG - CD2 ANGL. DEV. = 6.7 DEGREES REMARK 500 TRP G 496 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER F 11 108.97 60.89 REMARK 500 ASP F 38 111.35 -173.35 REMARK 500 ASN F 57 4.90 -18.54 REMARK 500 SER F 83 34.83 -94.35 REMARK 500 ASN F 142 42.98 -140.14 REMARK 500 LYS F 147 -75.99 -67.29 REMARK 500 ASP G 24 -86.59 -70.14 REMARK 500 ALA G 25 -14.61 -174.43 REMARK 500 ASN G 26 147.59 -35.98 REMARK 500 VAL G 61 38.11 -88.02 REMARK 500 GLU G 62 -37.21 -143.60 REMARK 500 SER G 71 -30.46 61.31 REMARK 500 ALA G 75 -77.10 -63.87 REMARK 500 GLU G 84 -20.22 50.37 REMARK 500 THR G 174 43.35 -107.19 REMARK 500 GLN G 175 27.66 32.86 REMARK 500 ARG G 177 -72.24 -54.43 REMARK 500 MET G 190 -4.17 74.20 REMARK 500 ARG G 218 -144.27 -78.48 REMARK 500 GLU G 222 132.63 166.34 REMARK 500 ASN G 228 -65.15 -93.21 REMARK 500 ILE G 229 -26.49 54.76 REMARK 500 GLU G 277 -5.44 -59.46 REMARK 500 THR G 289 -165.44 -114.44 REMARK 500 ALA G 309 -95.11 -107.84 REMARK 500 ASN G 324 -46.82 79.38 REMARK 500 GLN G 337 -33.81 97.09 REMARK 500 ASN G 340 8.15 59.91 REMARK 500 ALA G 347 45.05 -83.57 REMARK 500 TRP G 356 67.81 60.68 REMARK 500 SER G 399 -90.68 -78.19 REMARK 500 GLU G 437 46.47 -75.82 REMARK 500 ASN G 456 161.45 73.55 REMARK 500 LYS G 463 2.73 -166.63 REMARK 500 ALA G 464 71.16 -103.61 REMARK 500 ILE G 466 67.26 -111.50 REMARK 500 GLU G 467 -59.83 -19.96 REMARK 500 PRO G 472 109.36 -56.83 REMARK 500 ARG G 479 -64.38 -6.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP G 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL G 503 DBREF 1GLB F 1 168 UNP P69783 PTGA_ECOLI 1 168 DBREF 1GLB G 1 501 UNP P0A6F3 GLPK_ECOLI 1 501 SEQRES 1 F 168 GLY LEU PHE ASP LYS LEU LYS SER LEU VAL SER ASP ASP SEQRES 2 F 168 LYS LYS ASP THR GLY THR ILE GLU ILE ILE ALA PRO LEU SEQRES 3 F 168 SER GLY GLU ILE VAL ASN ILE GLU ASP VAL PRO ASP VAL SEQRES 4 F 168 VAL PHE ALA GLU LYS ILE VAL GLY ASP GLY ILE ALA ILE SEQRES 5 F 168 LYS PRO THR GLY ASN LYS MET VAL ALA PRO VAL ASP GLY SEQRES 6 F 168 THR ILE GLY LYS ILE PHE GLU THR ASN HIS ALA PHE SER SEQRES 7 F 168 ILE GLU SER ASP SER GLY VAL GLU LEU PHE VAL HIS PHE SEQRES 8 F 168 GLY ILE ASP THR VAL GLU LEU LYS GLY GLU GLY PHE LYS SEQRES 9 F 168 ARG ILE ALA GLU GLU GLY GLN ARG VAL LYS VAL GLY ASP SEQRES 10 F 168 THR VAL ILE GLU PHE ASP LEU PRO LEU LEU GLU GLU LYS SEQRES 11 F 168 ALA LYS SER THR LEU THR PRO VAL VAL ILE SER ASN MET SEQRES 12 F 168 ASP GLU ILE LYS GLU LEU ILE LYS LEU SER GLY SER VAL SEQRES 13 F 168 THR VAL GLY GLU THR PRO VAL ILE ARG ILE LYS LYS SEQRES 1 G 501 THR GLU LYS LYS TYR ILE VAL ALA LEU ASP GLN GLY THR SEQRES 2 G 501 THR SER SER ARG ALA VAL VAL MET ASP HIS ASP ALA ASN SEQRES 3 G 501 ILE ILE SER VAL SER GLN ARG GLU PHE GLU GLN ILE TYR SEQRES 4 G 501 PRO LYS PRO GLY TRP VAL GLU HIS ASP PRO MET GLU ILE SEQRES 5 G 501 TRP ALA THR GLN SER SER THR LEU VAL GLU VAL LEU ALA SEQRES 6 G 501 LYS ALA ASP ILE SER SER ASP GLN ILE ALA ALA ILE GLY SEQRES 7 G 501 ILE THR ASN GLN ARG GLU THR THR ILE VAL TRP GLU LYS SEQRES 8 G 501 GLU THR GLY LYS PRO ILE TYR ASN ALA ILE VAL TRP GLN SEQRES 9 G 501 CYS ARG ARG THR ALA GLU ILE CYS GLU HIS LEU LYS ARG SEQRES 10 G 501 ASP GLY LEU GLU ASP TYR ILE ARG SER ASN THR GLY LEU SEQRES 11 G 501 VAL ILE ASP PRO TYR PHE SER GLY THR LYS VAL LYS TRP SEQRES 12 G 501 ILE LEU ASP HIS VAL GLU GLY SER ARG GLU ARG ALA ARG SEQRES 13 G 501 ARG GLY GLU LEU LEU PHE GLY THR VAL ASP THR TRP LEU SEQRES 14 G 501 ILE TRP LYS MET THR GLN GLY ARG VAL HIS VAL THR ASP SEQRES 15 G 501 TYR THR ASN ALA SER ARG THR MET LEU PHE ASN ILE HIS SEQRES 16 G 501 THR LEU ASP TRP ASP ASP LYS MET LEU GLU VAL LEU ASP SEQRES 17 G 501 ILE PRO ARG GLU MET LEU PRO GLU VAL ARG ARG SER SER SEQRES 18 G 501 GLU VAL TYR GLY GLN THR ASN ILE GLY GLY LYS GLY GLY SEQRES 19 G 501 THR ARG ILE PRO ILE SER GLY ILE ALA GLY ASP GLN GLN SEQRES 20 G 501 ALA ALA LEU PHE GLY GLN LEU CYS VAL LYS GLU GLY MET SEQRES 21 G 501 ALA LYS ASN THR TYR GLY THR GLY CYS PHE MET LEU MET SEQRES 22 G 501 ASN THR GLY GLU LYS ALA VAL LYS SER GLU ASN GLY LEU SEQRES 23 G 501 LEU THR THR ILE ALA CYS GLY PRO THR GLY GLU VAL ASN SEQRES 24 G 501 TYR ALA LEU GLU GLY ALA VAL PHE MET ALA GLY ALA SER SEQRES 25 G 501 ILE GLN TRP LEU ARG ASP GLU MET LYS LEU ILE ASN ASP SEQRES 26 G 501 ALA TYR ASP SER GLU TYR PHE ALA THR LYS VAL GLN ASN SEQRES 27 G 501 THR ASN GLY VAL TYR VAL VAL PRO ALA PHE THR GLY LEU SEQRES 28 G 501 GLY ALA PRO TYR TRP ASP PRO TYR ALA ARG GLY ALA ILE SEQRES 29 G 501 PHE GLY LEU THR ARG GLY VAL ASN ALA ASN HIS ILE ILE SEQRES 30 G 501 ARG ALA THR LEU GLU SER ILE ALA TYR GLN THR ARG ASP SEQRES 31 G 501 VAL LEU GLU ALA MET GLN ALA ASP SER GLY ILE ARG LEU SEQRES 32 G 501 HIS ALA LEU ARG VAL ASP GLY GLY ALA VAL ALA ASN ASN SEQRES 33 G 501 PHE LEU MET GLN PHE GLN SER ASP ILE LEU GLY THR ARG SEQRES 34 G 501 VAL GLU ARG PRO GLU VAL ARG GLU VAL THR ALA LEU GLY SEQRES 35 G 501 ALA ALA TYR LEU ALA GLY LEU ALA VAL GLY PHE TRP GLN SEQRES 36 G 501 ASN LEU ASP GLU LEU GLN GLU LYS ALA VAL ILE GLU ARG SEQRES 37 G 501 GLU PHE ARG PRO GLY ILE GLU THR THR GLU ARG ASN TYR SEQRES 38 G 501 ARG TYR ALA GLY TRP LYS LYS ALA VAL LYS ARG ALA MET SEQRES 39 G 501 ALA TRP GLU GLU HIS ASP GLU HET ADP G 502 27 HET GOL G 503 6 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ADP C10 H15 N5 O10 P2 FORMUL 4 GOL C3 H8 O3 HELIX 1 H1 ASN F 32 VAL F 36 5 5 HELIX 2 H2 ASP F 38 GLU F 43 1 6 HELIX 3 H3 ASP F 94 LYS F 99 5 6 HELIX 4 H4 ASP F 123 LYS F 130 1 8 HELIX 5 H5 ASN F 142 ILE F 146 5 5 HELIX 6 H6 PRO G 49 LYS G 66 1 18 HELIX 7 H7 THR G 108 ARG G 117 1 10 HELIX 8 H8 GLU G 121 SER G 126 1 6 HELIX 9 H9 GLY G 138 HIS G 147 1 10 HELIX 10 H10 ARG G 152 GLY G 158 1 7 HELIX 11 H11 VAL G 165 GLN G 175 1 11 HELIX 12 H12 TYR G 183 ARG G 188 1 6 HELIX 13 H13 LYS G 202 VAL G 206 1 5 HELIX 14 H14 ASP G 245 GLN G 253 1 9 HELIX 15 H15 GLY G 310 MET G 320 1 11 HELIX 16 H16 ALA G 326 LYS G 335 1 10 HELIX 17 H17 ASN G 374 SER G 399 1 26 HELIX 18 H18 ASN G 416 LEU G 426 1 11 HELIX 19 H19 VAL G 438 VAL G 451 1 14 HELIX 20 H20 ASP G 458 LYS G 463 5 6 HELIX 21 H21 ILE G 474 GLU G 478 5 5 HELIX 22 H22 ARG G 479 ALA G 493 1 15 SHEET 1 S1 8 GLN F 111 VAL F 113 0 SHEET 2 S1 8 ASP F 64 PHE F 71 -1 N ILE F 67 O GLN F 111 SHEET 3 S1 8 HIS F 75 ASP F 82 -1 O ALA F 76 N PHE F 71 SHEET 4 S1 8 GLY F 84 PHE F 91 -1 O VAL F 85 N SER F 81 SHEET 5 S1 8 THR F 136 ASN F 142 -1 O PRO F 137 N HIS F 90 SHEET 6 S1 8 ASP F 48 LYS F 53 -1 N ASP F 48 O ILE F 140 SHEET 7 S1 8 GLY F 28 ILE F 30 -1 O GLU F 29 N LYS F 53 SHEET 8 S1 8 GLY F 154 VAL F 156 -1 O VAL F 156 N GLY F 28 SHEET 1 S2 3 ILE F 20 ILE F 22 0 SHEET 2 S2 3 VAL F 163 LYS F 167 -1 O ILE F 164 N ILE F 22 SHEET 3 S2 3 LYS F 147 LEU F 152 -1 O ILE F 150 N ARG F 165 SHEET 1 S3 3 ASN F 57 ALA F 61 0 SHEET 2 S3 3 VAL F 119 ASP F 123 -1 O ILE F 120 N MET F 59 SHEET 3 S3 3 GLY F 102 ILE F 106 -1 O GLY F 102 N ASP F 123 SHEET 1 S1G 2 GLU G 216 ARG G 218 0 SHEET 2 S1G 2 HIS G 179 THR G 181 1 SHEET 1 S2G 5 GLU G 36 TYR G 39 0 SHEET 2 S2G 5 TRP G 44 ASP G 48 -1 SHEET 3 S2G 5 GLY G 94 ILE G 101 -1 SHEET 4 S2G 5 THR G 86 GLU G 90 -1 SHEET 5 S2G 5 LEU G 161 GLY G 163 -1 SHEET 1 S3G 2 PHE G 192 ASN G 193 0 SHEET 2 S3G 2 ASP G 198 TRP G 199 -1 SHEET 1 S4G 7 ARG G 468 ARG G 471 0 SHEET 2 S4G 7 THR G 428 ARG G 432 -1 SHEET 3 S4G 7 ALA G 405 GLY G 410 1 SHEET 4 S4G 7 MET G 260 TYR G 265 1 SHEET 5 S4G 7 CYS G 269 ASN G 274 -1 SHEET 6 S4G 7 GLU G 297 VAL G 306 -1 SHEET 7 S4G 7 LEU G 286 ALA G 291 -1 SHEET 1 T4G 7 ARG G 468 ARG G 471 0 SHEET 2 T4G 7 THR G 428 ARG G 432 -1 SHEET 3 T4G 7 ALA G 405 GLY G 410 1 SHEET 4 T4G 7 MET G 260 TYR G 265 1 SHEET 5 T4G 7 CYS G 269 ASN G 274 -1 SHEET 6 T4G 7 GLU G 297 VAL G 306 -1 SHEET 7 T4G 7 LYS G 278 LYS G 281 1 SHEET 1 S5G 2 GLY G 362 THR G 368 0 SHEET 2 S5G 2 VAL G 342 VAL G 345 -1 SHEET 1 S6G 6 GLY G 225 THR G 227 0 SHEET 2 S6G 6 ILE G 237 ALA G 243 -1 SHEET 3 S6G 6 ALA G 76 ASN G 81 1 SHEET 4 S6G 6 LYS G 4 GLN G 11 1 SHEET 5 S6G 6 SER G 15 MET G 21 -1 SHEET 6 S6G 6 SER G 29 ARG G 33 -1 CISPEP 1 ALA G 353 PRO G 354 0 1.85 SITE 1 AC1 12 ARG G 17 GLY G 266 THR G 267 GLY G 310 SITE 2 AC1 12 ALA G 311 ILE G 313 GLN G 314 ALA G 326 SITE 3 AC1 12 SER G 329 GLY G 411 ALA G 412 ASN G 415 SITE 1 AC2 8 THR G 13 ARG G 83 GLU G 84 TRP G 103 SITE 2 AC2 8 TYR G 135 ASP G 245 GLN G 246 PHE G 270 CRYST1 123.700 124.900 134.200 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008084 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008006 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007452 0.00000