PDB Short entry for 1GN8 HEADER TRANSFERASE 03-OCT-01 1GN8 TITLE PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE IN COMPLEX WITH MN2+ATP FROM TITLE 2 ESCHERICHIA COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.7.3 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562 KEYWDS TRANSFERASE, COENZYME A BIOSYNTHESIS, NUCLEOTIDYLTRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.IZARD REVDAT 4 28-JUN-17 1GN8 1 REMARK REVDAT 3 24-FEB-09 1GN8 1 VERSN REVDAT 2 09-JUN-03 1GN8 1 REMARK REVDAT 1 17-JAN-02 1GN8 0 JRNL AUTH T.IZARD JRNL TITL THE CRYSTAL STRUCTURES OF PHOSPHOPANTETHEINE JRNL TITL 2 ADENYLYLTRANSFERASE WITH BOUND SUBSTRATES REVEAL THE JRNL TITL 3 ENZYME'S CATALYTIC MECHANISM JRNL REF J.MOL.BIOL. V. 315 487 2001 JRNL REFN ISSN 0022-2836 JRNL PMID 11812124 JRNL DOI 10.1006/JMBI.2001.5272 REMARK 2 REMARK 2 RESOLUTION. 1.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 35800 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1774 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.83 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.94 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5625 REMARK 3 BIN R VALUE (WORKING SET) : 0.3380 REMARK 3 BIN FREE R VALUE : 0.3190 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 282 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.019 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2506 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 79 REMARK 3 SOLVENT ATOMS : 247 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.25 REMARK 3 ESD FROM SIGMAA (A) : 0.30 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.28 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.28 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.170 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : DPC.PAR REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER-TOPOLOGY REMARK 3 TOPOLOGY FILE 3 : DPC.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1GN8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-OCT-01. REMARK 100 THE DEPOSITION ID IS D_1290008647. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUL-00 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : ENRAF-NONIUS FR591 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAC SCIENCE DIP REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35949 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.820 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 12.35 REMARK 200 R MERGE (I) : 0.16300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.49500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PBD ENTRY 1B6T REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 5.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 67.53000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 67.53000 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 67.53000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 67.53000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 67.53000 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 67.53000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 67.53000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 67.53000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 67.53000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 67.53000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 67.53000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 67.53000 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 67.53000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 67.53000 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 67.53000 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 67.53000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 67.53000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 67.53000 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 67.53000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 67.53000 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 67.53000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 67.53000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 67.53000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 67.53000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 67.53000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 67.53000 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 67.53000 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 67.53000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 67.53000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 67.53000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 67.53000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 67.53000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 67.53000 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 67.53000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 67.53000 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 67.53000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PHE A 11 CG ARG A 51 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 11 87.09 34.64 REMARK 500 PRO A 40 -3.73 -50.48 REMARK 500 SER A 41 90.03 -46.52 REMARK 500 LYS A 43 77.49 52.04 REMARK 500 PRO A 44 101.86 -52.45 REMARK 500 MET A 45 -53.84 -29.52 REMARK 500 ASP A 72 -164.04 57.84 REMARK 500 LEU A 73 116.22 -37.55 REMARK 500 GLN A 139 37.27 70.71 REMARK 500 ARG B 91 -65.79 -109.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 802 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A 700 O1A REMARK 620 2 ATP A 700 O2G 104.2 REMARK 620 3 ATP A 700 O1B 67.1 77.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 801 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP B 600 O2G REMARK 620 2 ATP B 600 O1A 105.7 REMARK 620 3 ATP B 600 O1B 78.7 68.7 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP B 600 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1B6T RELATED DB: PDB REMARK 900 PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE IN COMPLEX WITH 3'- REMARK 900 DEPHOSPHO-COA FROM ESCHERICHIA COLI REMARK 900 RELATED ID: 1QJC RELATED DB: PDB REMARK 900 PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE FROM ESCHERICHIA COLI DBREF 1GN8 A 1 159 UNP P23875 COAD_ECOLI 1 159 DBREF 1GN8 B 1 159 UNP P23875 COAD_ECOLI 1 159 SEQRES 1 A 159 MET GLN LYS ARG ALA ILE TYR PRO GLY THR PHE ASP PRO SEQRES 2 A 159 ILE THR ASN GLY HIS ILE ASP ILE VAL THR ARG ALA THR SEQRES 3 A 159 GLN MET PHE ASP HIS VAL ILE LEU ALA ILE ALA ALA SER SEQRES 4 A 159 PRO SER LYS LYS PRO MET PHE THR LEU GLU GLU ARG VAL SEQRES 5 A 159 ALA LEU ALA GLN GLN ALA THR ALA HIS LEU GLY ASN VAL SEQRES 6 A 159 GLU VAL VAL GLY PHE SER ASP LEU MET ALA ASN PHE ALA SEQRES 7 A 159 ARG ASN GLN HIS ALA THR VAL LEU ILE ARG GLY LEU ARG SEQRES 8 A 159 ALA VAL ALA ASP PHE GLU TYR GLU MET GLN LEU ALA HIS SEQRES 9 A 159 MET ASN ARG HIS LEU MET PRO GLU LEU GLU SER VAL PHE SEQRES 10 A 159 LEU MET PRO SER LYS GLU TRP SER PHE ILE SER SER SER SEQRES 11 A 159 LEU VAL LYS GLU VAL ALA ARG HIS GLN GLY ASP VAL THR SEQRES 12 A 159 HIS PHE LEU PRO GLU ASN VAL HIS GLN ALA LEU MET ALA SEQRES 13 A 159 LYS LEU ALA SEQRES 1 B 159 MET GLN LYS ARG ALA ILE TYR PRO GLY THR PHE ASP PRO SEQRES 2 B 159 ILE THR ASN GLY HIS ILE ASP ILE VAL THR ARG ALA THR SEQRES 3 B 159 GLN MET PHE ASP HIS VAL ILE LEU ALA ILE ALA ALA SER SEQRES 4 B 159 PRO SER LYS LYS PRO MET PHE THR LEU GLU GLU ARG VAL SEQRES 5 B 159 ALA LEU ALA GLN GLN ALA THR ALA HIS LEU GLY ASN VAL SEQRES 6 B 159 GLU VAL VAL GLY PHE SER ASP LEU MET ALA ASN PHE ALA SEQRES 7 B 159 ARG ASN GLN HIS ALA THR VAL LEU ILE ARG GLY LEU ARG SEQRES 8 B 159 ALA VAL ALA ASP PHE GLU TYR GLU MET GLN LEU ALA HIS SEQRES 9 B 159 MET ASN ARG HIS LEU MET PRO GLU LEU GLU SER VAL PHE SEQRES 10 B 159 LEU MET PRO SER LYS GLU TRP SER PHE ILE SER SER SER SEQRES 11 B 159 LEU VAL LYS GLU VAL ALA ARG HIS GLN GLY ASP VAL THR SEQRES 12 B 159 HIS PHE LEU PRO GLU ASN VAL HIS GLN ALA LEU MET ALA SEQRES 13 B 159 LYS LEU ALA HET SO4 A 603 5 HET ATP A 700 31 HET MN A 802 1 HET ATP B 600 31 HET SO4 B 601 5 HET SO4 B 602 5 HET MN B 801 1 HETNAM SO4 SULFATE ION HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MN MANGANESE (II) ION FORMUL 3 SO4 3(O4 S 2-) FORMUL 4 ATP 2(C10 H16 N5 O13 P3) FORMUL 5 MN 2(MN 2+) FORMUL 10 HOH *247(H2 O) HELIX 1 1 THR A 15 GLN A 27 1 13 HELIX 2 2 THR A 47 THR A 59 1 13 HELIX 3 3 LEU A 73 GLN A 81 1 9 HELIX 4 4 ASP A 95 MET A 110 1 16 HELIX 5 5 SER A 121 SER A 125 5 5 HELIX 6 6 SER A 128 HIS A 138 1 11 HELIX 7 7 VAL A 142 LEU A 146 5 5 HELIX 8 8 PRO A 147 ALA A 159 1 13 HELIX 9 9 THR B 15 GLN B 27 1 13 HELIX 10 10 SER B 39 LYS B 43 5 5 HELIX 11 11 THR B 47 THR B 59 1 13 HELIX 12 12 LEU B 73 GLN B 81 1 9 HELIX 13 13 ALA B 92 MET B 110 1 19 HELIX 14 14 SER B 121 SER B 125 5 5 HELIX 15 15 SER B 128 HIS B 138 1 11 HELIX 16 16 VAL B 142 LEU B 146 5 5 HELIX 17 17 PRO B 147 LEU B 158 1 12 SHEET 1 AA 5 VAL A 65 PHE A 70 0 SHEET 2 AA 5 HIS A 31 ALA A 37 1 O VAL A 32 N GLU A 66 SHEET 3 AA 5 ARG A 4 GLY A 9 1 O ALA A 5 N ILE A 33 SHEET 4 AA 5 VAL A 85 GLY A 89 1 O VAL A 85 N ILE A 6 SHEET 5 AA 5 GLU A 114 LEU A 118 1 O GLU A 114 N LEU A 86 SHEET 1 BA 5 VAL B 65 PHE B 70 0 SHEET 2 BA 5 HIS B 31 ALA B 37 1 O VAL B 32 N GLU B 66 SHEET 3 BA 5 ARG B 4 GLY B 9 1 O ALA B 5 N ILE B 33 SHEET 4 BA 5 VAL B 85 GLY B 89 1 O VAL B 85 N ILE B 6 SHEET 5 BA 5 GLU B 114 LEU B 118 1 O GLU B 114 N LEU B 86 LINK MN MN A 802 O1A ATP A 700 1555 1555 2.62 LINK MN MN A 802 O2G ATP A 700 1555 1555 2.63 LINK MN MN A 802 O1B ATP A 700 1555 1555 2.49 LINK MN MN B 801 O2G ATP B 600 1555 1555 2.66 LINK MN MN B 801 O1A ATP B 600 1555 1555 2.58 LINK MN MN B 801 O1B ATP B 600 1555 1555 2.42 CISPEP 1 ASP A 12 PRO A 13 0 0.52 CISPEP 2 ASP B 12 PRO B 13 0 -0.38 SITE 1 AC1 6 SER A 121 LYS A 122 HOH A2113 HOH A2114 SITE 2 AC1 6 HIS B 104 ARG B 107 SITE 1 AC2 1 ATP A 700 SITE 1 AC3 6 SER B 39 PRO B 40 SER B 41 ARG B 137 SITE 2 AC3 6 HIS B 138 HOH B2031 SITE 1 AC4 6 HIS A 104 ARG A 107 SER B 121 LYS B 122 SITE 2 AC4 6 HOH B2128 HOH B2129 SITE 1 AC5 1 ATP B 600 SITE 1 AC6 23 TYR A 7 THR A 10 PHE A 11 GLY A 17 SITE 2 AC6 23 HIS A 18 ILE A 21 ARG A 88 GLY A 89 SITE 3 AC6 23 ARG A 91 PRO A 120 TRP A 124 ILE A 127 SITE 4 AC6 23 SER A 128 SER A 129 SER A 130 MN A 802 SITE 5 AC6 23 HOH A2011 HOH A2063 HOH A2089 HOH A2115 SITE 6 AC6 23 HOH A2116 HOH A2117 HOH A2118 SITE 1 AC7 21 TYR B 7 THR B 10 PHE B 11 GLY B 17 SITE 2 AC7 21 HIS B 18 ILE B 21 ARG B 88 GLY B 89 SITE 3 AC7 21 ARG B 91 GLU B 99 PRO B 120 TRP B 124 SITE 4 AC7 21 ILE B 127 SER B 128 SER B 129 SER B 130 SITE 5 AC7 21 MN B 801 HOH B2013 HOH B2104 HOH B2126 SITE 6 AC7 21 HOH B2127 CRYST1 135.060 135.060 135.060 90.00 90.00 90.00 I 2 3 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007404 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007404 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007404 0.00000