PDB Short entry for 1HKQ HEADER DNA BINDING PROTEIN 11-MAR-03 1HKQ TITLE PPS10 PLASMID DNA REPLICATION INITIATOR PROTEIN REPA. REPLICATION TITLE 2 INACTIVE, DIMERIC N-TERMINAL DOMAIN. COMPND MOL_ID: 1; COMPND 2 MOLECULE: REPLICATION PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN DIMER, RESIDUES 2-133; COMPND 5 SYNONYM: REPA; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: PPS10 PLASMID DNA REPLICATION INITIATOR, REPLICATION COMPND 8 INACTIVE, DIMERIC SPECIES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS SAVASTANOI; SOURCE 3 ORGANISM_COMMON: PSEUDOMONAS SYRINGAE PV. SAVASTANOI; SOURCE 4 ORGANISM_TAXID: 29438; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: SG22097; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PRG-RECA-NHIS KEYWDS DNA BINDING PROTEIN, WINGED-HELIX, PPS10 PLASMID, REPLICATION KEYWDS 2 INITIATOR DIMER. EXPDTA X-RAY DIFFRACTION AUTHOR R.GIRALDO,C.FERNANDEZ-TORNERO,P.R.EVANS,R.DIAZ-OREJAS,A.ROMERO REVDAT 7 24-JUL-19 1HKQ 1 REMARK REVDAT 6 10-APR-19 1HKQ 1 SOURCE REVDAT 5 27-FEB-19 1HKQ 1 REMARK REVDAT 4 24-FEB-09 1HKQ 1 VERSN REVDAT 3 15-JUN-05 1HKQ 1 JRNL REVDAT 2 06-NOV-03 1HKQ 1 SHEET REVDAT 1 29-MAY-03 1HKQ 0 JRNL AUTH R.GIRALDO,C.FERNANDEZ-TORNERO,P.R.EVANS,R.DIAZ-OREJAS, JRNL AUTH 2 A.ROMERO JRNL TITL A CONFORMATIONAL SWITCH BETWEEN TRANSCRIPTIONAL REPRESSION JRNL TITL 2 AND REPLICATION INITIATION IN REPA DIMERIZATION DOMAIN JRNL REF NAT.STRUCT.BIOL. V. 10 496 2003 JRNL REFN ISSN 1072-8368 JRNL PMID 12825085 JRNL DOI 10.1038/NSB0703-496 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.DIAZ-LOPEZ,M.LAGES-GONZALO,A.SERRANO-LOPEZ,C.ALFONSO, REMARK 1 AUTH 2 G.RIVAS,R.DIAZ-OREJAS,R.GIRALDO REMARK 1 TITL STRUCTURAL CHANGES IN REPA, A PLASMID REPLICATION INITIATOR, REMARK 1 TITL 2 UPON BINDING TO ORIGIN DNA REMARK 1 REF J.BIOL.CHEM. V. 278 18606 2003 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 12637554 REMARK 1 DOI 10.1074/JBC.M212024200 REMARK 1 REFERENCE 2 REMARK 1 AUTH R.GIRALDO REMARK 1 TITL COMMON DOMAINS IN THE INITIATORS OF DNA REPLICATION IN REMARK 1 TITL 2 BACTERIA, ARCHAEA AND EUKARYA: COMBINED STRUCTURAL, REMARK 1 TITL 3 FUNCTIONAL AND PHYLOGENETIC PERSPECTIVES REMARK 1 REF FEMS MICROBIOL.REV. V. 26 533 2003 REMARK 1 REFN ISSN 0168-6445 REMARK 1 PMID 12586394 REMARK 1 DOI 10.1016/S0168-6445(02)00145-6 REMARK 1 REFERENCE 3 REMARK 1 AUTH R.GIRALDO,J.M.ANDREU,R.DIAZ-OREJAS REMARK 1 TITL PROTEIN DOMAINS AND CONFORMATIONAL CHANGES IN THE ACTIVATION REMARK 1 TITL 2 OF REPA, A DNA REPLICATION INITIATOR REMARK 1 REF EMBO J. V. 17 4511 1998 REMARK 1 REFN ISSN 0261-4189 REMARK 1 PMID 9687517 REMARK 1 DOI 10.1093/EMBOJ/17.15.4511 REMARK 1 REFERENCE 4 REMARK 1 AUTH C.NIETO,R.GIRALDO,M.E.FERNANDEZ-TRESGUERRES,R.DIAZ REMARK 1 TITL GENETIC AND FUNCTIONAL ANALYSIS OF THE BASIC REPLICON OF REMARK 1 TITL 2 PPS10, A PLASMID SPECIFIC FOR PSEUDOMONAS ISOLATED FROM REMARK 1 TITL 3 PSEUDOMONAS SYRINGAE, PATOVAR SAVASTANOI REMARK 1 REF J.MOL.BIOL. V. 223 415 1992 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 1738155 REMARK 1 DOI 10.1016/0022-2836(92)90661-3 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1025607.140 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 7421 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.238 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.900 REMARK 3 FREE R VALUE TEST SET COUNT : 806 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.010 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.92 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1110 REMARK 3 BIN R VALUE (WORKING SET) : 0.3420 REMARK 3 BIN FREE R VALUE : 0.3780 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 125 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.034 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2026 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 30 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.08000 REMARK 3 B22 (A**2) : 6.99000 REMARK 3 B33 (A**2) : -12.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.38 REMARK 3 ESD FROM SIGMAA (A) : 0.40 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.47 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.51 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.890 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT REMARK 3 KSOL : 0.31 REMARK 3 BSOL : 27.22 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : BENZ_NO.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : BENZ_NO.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE ELECTRON DENSITY FOR RESIDUES SER REMARK 3 B36 - LYS B42 IN CHAIN B IS DISCONTINUOUS, INTERPRETED TO BE REMARK 3 PARTIALLY DISORDERED. THUS IT HAS BEEN MODELLED BASED ON REMARK 3 STEREOCHEMICAL RESTRAINTS. REMARK 4 REMARK 4 1HKQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-MAR-03. REMARK 100 THE DEPOSITION ID IS D_1290012239. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-00 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.20 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X31 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0090, 1.0120 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8343 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 48.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.100 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.32000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: CNS, SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOUR DIFFUSION (HANGING DROPS), REMARK 280 WELLS: 500 MICROLITRES (14% PEG4000, 6% MPD), DROPS: 5 REMARK 280 MICROLITRES PROTEIN (5 MG/ML IN 50 MM K2HPO4/ KH2PO4, PH= 6.2),5 REMARK 280 MICROLITRES WELL SOL. PLUS 1 MICROLITRE OF P-CL-MERCURIBENZOATE REMARK 280 (=1 MM IN WATER), THIN LARGE CRYSTAL PRISMS APPEAR AT 295 REMARK 280 DEGREES KELVIN IN 1 MONTH., PH 6.20, VAPOR DIFFUSION, HANGING REMARK 280 DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.93300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.03650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.76650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.03650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.93300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.76650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 ASP A 3 REMARK 465 ASN A 4 REMARK 465 LYS A 5 REMARK 465 VAL A 6 REMARK 465 THR A 7 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 ASP B 3 REMARK 465 ASN B 4 REMARK 465 LYS B 5 REMARK 465 VAL B 6 REMARK 465 THR B 7 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 85 -127.18 70.94 REMARK 500 SER B 9 27.45 -71.36 REMARK 500 LEU B 33 49.38 -60.01 REMARK 500 PRO B 39 -153.90 -70.25 REMARK 500 PRO B 41 -171.07 -47.50 REMARK 500 ASP B 43 -79.41 83.22 REMARK 500 ASP B 60 90.90 -59.82 REMARK 500 VAL B 61 -16.77 -40.53 REMARK 500 ARG B 101 63.90 -109.24 REMARK 500 PRO B 117 25.29 -64.67 REMARK 500 HIS B 118 -8.23 -150.06 REMARK 500 LEU B 119 -9.35 -58.94 REMARK 500 THR B 120 -67.40 -94.27 REMARK 500 LYS B 124 -88.40 -57.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 81 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A1133 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 106 SG REMARK 620 2 GLN A 104 OE1 90.1 REMARK 620 3 BEZ A1134 C4 172.5 93.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A1136 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 118 NE2 REMARK 620 2 THR A 114 O 98.6 REMARK 620 3 HOH A2020 O 76.5 148.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A1137 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B2010 O REMARK 620 2 HIS A 123 NE2 133.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG B1133 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 106 SG REMARK 620 2 GLN B 104 OE1 88.5 REMARK 620 3 GLN B 104 O 77.0 96.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG B1135 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 29 SG REMARK 620 2 SER B 32 OG 129.5 REMARK 620 3 CYS B 29 O 84.7 44.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG B1136 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 118 NE2 REMARK 620 2 THR B 114 O 88.9 REMARK 620 N 1 REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A1133 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A1135 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A1136 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A1137 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A1138 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG B1133 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG B1135 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG B1136 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG B1137 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEZ A1134 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEZ B1134 REMARK 999 REMARK 999 SEQUENCE REMARK 999 CLONED REPA STARTS WITH A SINGLE MET RESIDUE DBREF 1HKQ A 1 132 UNP Q52546 Q52546 2 133 DBREF 1HKQ B 1 132 UNP Q52546 Q52546 2 133 SEQRES 1 A 132 MET VAL ASP ASN LYS VAL THR GLN SER ASN LYS LEU ILE SEQRES 2 A 132 GLU SER SER HIS THR LEU THR LEU ASN GLU LYS ARG LEU SEQRES 3 A 132 VAL LEU CYS ALA ALA SER LEU ILE ASP SER ARG LYS PRO SEQRES 4 A 132 LEU PRO LYS ASP GLY TYR LEU THR ILE ARG ALA ASP THR SEQRES 5 A 132 PHE ALA GLU VAL PHE GLY ILE ASP VAL LYS HIS ALA TYR SEQRES 6 A 132 ALA ALA LEU ASP ASP ALA ALA THR LYS LEU PHE ASN ARG SEQRES 7 A 132 ASP ILE ARG ARG TYR VAL LYS GLY LYS VAL VAL GLU ARG SEQRES 8 A 132 MET ARG TRP VAL PHE HIS VAL LYS TYR ARG GLU GLY GLN SEQRES 9 A 132 GLY CYS VAL GLU LEU GLY PHE SER PRO THR ILE ILE PRO SEQRES 10 A 132 HIS LEU THR MET LEU HIS LYS GLU PHE THR SER TYR GLN SEQRES 11 A 132 LEU LYS SEQRES 1 B 132 MET VAL ASP ASN LYS VAL THR GLN SER ASN LYS LEU ILE SEQRES 2 B 132 GLU SER SER HIS THR LEU THR LEU ASN GLU LYS ARG LEU SEQRES 3 B 132 VAL LEU CYS ALA ALA SER LEU ILE ASP SER ARG LYS PRO SEQRES 4 B 132 LEU PRO LYS ASP GLY TYR LEU THR ILE ARG ALA ASP THR SEQRES 5 B 132 PHE ALA GLU VAL PHE GLY ILE ASP VAL LYS HIS ALA TYR SEQRES 6 B 132 ALA ALA LEU ASP ASP ALA ALA THR LYS LEU PHE ASN ARG SEQRES 7 B 132 ASP ILE ARG ARG TYR VAL LYS GLY LYS VAL VAL GLU ARG SEQRES 8 B 132 MET ARG TRP VAL PHE HIS VAL LYS TYR ARG GLU GLY GLN SEQRES 9 B 132 GLY CYS VAL GLU LEU GLY PHE SER PRO THR ILE ILE PRO SEQRES 10 B 132 HIS LEU THR MET LEU HIS LYS GLU PHE THR SER TYR GLN SEQRES 11 B 132 LEU LYS HET HG A1133 1 HET BEZ A1134 9 HET HG A1135 1 HET HG A1136 1 HET HG A1137 1 HET PO4 A1138 5 HET HG B1133 1 HET BEZ B1134 9 HET HG B1135 1 HET HG B1136 1 HET HG B1137 1 HETNAM HG MERCURY (II) ION HETNAM BEZ BENZOIC ACID HETNAM PO4 PHOSPHATE ION FORMUL 3 HG 8(HG 2+) FORMUL 4 BEZ 2(C7 H6 O2) FORMUL 8 PO4 O4 P 3- FORMUL 14 HOH *30(H2 O) HELIX 1 1 ASN A 10 LEU A 19 1 10 HELIX 2 2 GLU A 23 LEU A 33 1 11 HELIX 3 3 ALA A 50 PHE A 57 1 8 HELIX 4 4 HIS A 63 ARG A 78 1 16 HELIX 5 5 PRO A 113 GLN A 130 1 18 HELIX 6 6 ASN B 10 LEU B 19 1 10 HELIX 7 7 GLU B 23 LEU B 33 1 11 HELIX 8 8 ALA B 50 PHE B 57 1 8 HELIX 9 9 HIS B 63 ARG B 78 1 16 HELIX 10 10 PRO B 113 GLN B 130 1 18 SHEET 1 AA 5 GLY A 44 ARG A 49 0 SHEET 2 AA 5 GLY A 105 PHE A 111 -1 O VAL A 107 N ILE A 48 SHEET 3 AA 5 PHE A 96 GLU A 102 -1 N PHE A 96 O GLY A 110 SHEET 4 AA 5 LYS B 87 ARG B 93 -1 O VAL B 89 N TYR A 100 SHEET 5 AA 5 ILE B 80 VAL B 84 -1 O ILE B 80 N MET B 92 SHEET 1 AB 5 GLY B 44 ARG B 49 0 SHEET 2 AB 5 GLY B 105 PHE B 111 -1 O VAL B 107 N ILE B 48 SHEET 3 AB 5 PHE B 96 GLU B 102 -1 N PHE B 96 O GLY B 110 SHEET 4 AB 5 LYS A 87 ARG A 93 -1 O VAL A 89 N TYR B 100 SHEET 5 AB 5 ILE A 80 VAL A 84 -1 O ILE A 80 N MET A 92 LINK HG HG A1133 SG CYS A 106 1555 1555 2.43 LINK HG HG A1133 OE1 GLN A 104 1555 1555 3.20 LINK HG HG A1133 C4 BEZ A1134 1555 1555 1.99 LINK HG HG A1135 SG CYS A 29 1555 1555 2.39 LINK HG HG A1136 NE2 HIS A 118 1555 1555 2.57 LINK HG HG A1136 O THR A 114 1555 1555 3.23 LINK HG HG A1136 O HOH A2020 1555 1555 3.38 LINK HG HG A1137 O HOH B2010 1555 2564 3.32 LINK HG HG A1137 NE2 HIS A 123 1555 1555 2.17 LINK HG HG B1133 SG CYS B 106 1555 1555 2.52 LINK HG HG B1133 OE1 GLN B 104 1555 1555 3.03 LINK HG HG B1133 O GLN B 104 1555 1555 3.40 LINK HG HG B1135 SG CYS B 29 1555 1555 2.46 LINK HG HG B1135 OG SER B 32 1555 1555 3.19 LINK HG HG B1135 O CYS B 29 1555 1555 3.29 LINK HG HG B1136 NE2 HIS B 118 1555 1555 2.12 LINK HG HG B1136 O THR B 114 1555 1555 3.09 LINK HG HG B1137 NE2 HIS B 123 1555 1555 2.07 SITE 1 AC1 3 GLN A 104 CYS A 106 BEZ A1134 SITE 1 AC2 2 CYS A 29 SER A 32 SITE 1 AC3 2 THR A 114 HIS A 118 SITE 1 AC4 2 SER A 32 HIS A 123 SITE 1 AC5 3 LYS A 62 HIS A 63 LYS A 85 SITE 1 AC6 3 GLN B 104 CYS B 106 BEZ B1134 SITE 1 AC7 2 CYS B 29 SER B 32 SITE 1 AC8 2 THR B 114 HIS B 118 SITE 1 AC9 1 HIS B 123 SITE 1 BC1 5 ARG A 49 GLN A 104 HG A1133 HIS B 123 SITE 2 BC1 5 LYS B 124 SITE 1 BC2 4 HIS A 123 LYS A 124 GLN B 104 HG B1133 CRYST1 51.866 55.533 96.073 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019280 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018007 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010409 0.00000 MTRIX1 1 -0.051640 0.998220 0.029890 -15.37287 1 MTRIX2 1 0.997450 0.050080 0.050890 11.53942 1 MTRIX3 1 0.049300 0.032450 -0.998260 70.66085 1