PDB Short entry for 1HLG HEADER HYDROLASE 12-MAR-99 1HLG TITLE CRYSTAL STRUCTURE OF HUMAN GASTRIC LIPASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIPASE, GASTRIC; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.1.1.3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 ORGAN: STOMAC; SOURCE 6 CELL: CHIEF CELL; SOURCE 7 EXPRESSION_SYSTEM: INSECT CELL; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VIRUS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: BACULOVIRUS KEYWDS LIPASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.ROUSSEL,S.CANAAN,R.VERGER,C.CAMBILLAU REVDAT 5 27-DEC-23 1HLG 1 HETSYN REVDAT 4 29-JUL-20 1HLG 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 13-JUL-11 1HLG 1 VERSN REVDAT 2 24-FEB-09 1HLG 1 VERSN REVDAT 1 15-MAR-00 1HLG 0 JRNL AUTH A.ROUSSEL,S.CANAAN,M.P.EGLOFF,M.RIVIERE,L.DUPUIS,R.VERGER, JRNL AUTH 2 C.CAMBILLAU JRNL TITL CRYSTAL STRUCTURE OF HUMAN GASTRIC LIPASE AND MODEL OF JRNL TITL 2 LYSOSOMAL ACID LIPASE, TWO LIPOLYTIC ENZYMES OF MEDICAL JRNL TITL 3 INTEREST. JRNL REF J.BIOL.CHEM. V. 274 16995 1999 JRNL REFN ISSN 0021-9258 JRNL PMID 10358049 JRNL DOI 10.1074/JBC.274.24.16995 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3843 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 47643 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2381 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.19 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 7293 REMARK 3 BIN R VALUE (WORKING SET) : 0.3190 REMARK 3 BIN FREE R VALUE : 0.3480 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 389 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.018 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5960 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 140 REMARK 3 SOLVENT ATOMS : 92 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM SIGMAA (A) : 0.51 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.39 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.58 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.900 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : RESTRAINTS REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : PARAM19X.PRO REMARK 3 PARAMETER FILE 3 : PARAM3.CHO REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : TOPH19X.PRO REMARK 3 TOPOLOGY FILE 3 : TOPH3.CHO REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1HLG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAR-99. REMARK 100 THE DEPOSITION ID IS D_1000000645. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : SEP-98 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 3 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LURE REMARK 200 BEAMLINE : DW32 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.963 REMARK 200 MONOCHROMATOR : LURE REMARK 200 OPTICS : LURE REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45522 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.39900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: CCP4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 81.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 6.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 5.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 122.16500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 122.16500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 122.16500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 122.16500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 122.16500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 122.16500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 122.16500 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 122.16500 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 122.16500 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 122.16500 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 122.16500 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 122.16500 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 122.16500 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 122.16500 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 122.16500 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 122.16500 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 122.16500 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 122.16500 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 122.16500 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 122.16500 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 122.16500 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 122.16500 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 122.16500 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 122.16500 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 122.16500 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 122.16500 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 122.16500 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 122.16500 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 122.16500 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 122.16500 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 122.16500 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 122.16500 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 122.16500 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 122.16500 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 122.16500 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 122.16500 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 54 REMARK 465 THR A 55 REMARK 465 GLY A 56 REMARK 465 ASN B 54 REMARK 465 THR B 55 REMARK 465 GLY B 56 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 425 O HOH B 381 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 52 CB SER A 52 OG 0.111 REMARK 500 ARG A 229 NE ARG A 229 CZ 0.079 REMARK 500 ARG A 229 CZ ARG A 229 NH1 0.113 REMARK 500 ARG A 229 CZ ARG A 229 NH2 0.104 REMARK 500 LYS B 50 CB LYS B 50 CG 0.187 REMARK 500 LYS B 50 CG LYS B 50 CD 0.228 REMARK 500 LYS B 50 CD LYS B 50 CE 0.192 REMARK 500 LYS B 50 CE LYS B 50 NZ 0.183 REMARK 500 LYS B 50 C LYS B 50 O 0.149 REMARK 500 ASN B 51 CB ASN B 51 CG 0.186 REMARK 500 ASP B 377 CG ASP B 377 OD1 0.165 REMARK 500 ASP B 377 CG ASP B 377 OD2 0.161 REMARK 500 LYS B 378 C LYS B 378 O 0.142 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 300 CB - CG - OD1 ANGL. DEV. = -5.8 DEGREES REMARK 500 LYS B 49 CD - CE - NZ ANGL. DEV. = 14.1 DEGREES REMARK 500 ASP B 300 CB - CG - OD1 ANGL. DEV. = -9.8 DEGREES REMARK 500 ASP B 300 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 50 -46.62 170.86 REMARK 500 ALA A 69 -158.09 -105.62 REMARK 500 ASN A 77 -140.35 -117.11 REMARK 500 ASN A 81 25.54 -146.29 REMARK 500 ALA A 105 34.24 -140.71 REMARK 500 ARG A 106 54.18 -112.48 REMARK 500 SER A 153 -129.95 50.97 REMARK 500 VAL A 185 45.30 -146.33 REMARK 500 LEU A 191 -7.62 -57.13 REMARK 500 ASP A 209 -156.18 -101.79 REMARK 500 LYS A 210 -141.38 59.59 REMARK 500 HIS A 215 -141.42 56.19 REMARK 500 GLU A 230 -60.68 -92.86 REMARK 500 THR A 253 -7.72 -57.38 REMARK 500 MET A 297 -0.96 -59.84 REMARK 500 ASN A 341 38.55 84.70 REMARK 500 VAL A 366 -57.44 -129.20 REMARK 500 SER A 375 23.22 -69.48 REMARK 500 ASP A 377 -78.46 -126.75 REMARK 500 LYS B 50 -52.71 168.55 REMARK 500 ALA B 69 -157.08 -103.96 REMARK 500 ASN B 77 -138.91 -117.70 REMARK 500 ASN B 81 24.14 -144.61 REMARK 500 ALA B 105 37.97 -141.25 REMARK 500 SER B 153 -127.19 48.48 REMARK 500 VAL B 185 44.48 -147.75 REMARK 500 ASP B 209 -157.37 -101.33 REMARK 500 LYS B 210 -141.60 61.12 REMARK 500 HIS B 215 -144.19 57.47 REMARK 500 GLU B 230 -60.33 -92.25 REMARK 500 THR B 253 -5.42 -55.30 REMARK 500 ALA B 286 173.13 -59.34 REMARK 500 ASN B 341 40.42 81.89 REMARK 500 TYR B 344 147.90 -172.27 REMARK 500 VAL B 366 -60.96 -129.58 REMARK 500 SER B 375 22.48 -67.74 REMARK 500 GLU B 376 18.82 -140.16 REMARK 500 ASP B 377 -78.27 -131.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: SA REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: ACTIVE SITE CHAIN A REMARK 800 REMARK 800 SITE_IDENTIFIER: SB REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: ACTIVE SITE CHAIN B DBREF 1HLG A 9 379 UNP P07098 LIPG_HUMAN 28 398 DBREF 1HLG B 9 379 UNP P07098 LIPG_HUMAN 28 398 SEQRES 1 A 371 SER PRO GLU VAL THR MET ASN ILE SER GLN MET ILE THR SEQRES 2 A 371 TYR TRP GLY TYR PRO ASN GLU GLU TYR GLU VAL VAL THR SEQRES 3 A 371 GLU ASP GLY TYR ILE LEU GLU VAL ASN ARG ILE PRO TYR SEQRES 4 A 371 GLY LYS LYS ASN SER GLY ASN THR GLY GLN ARG PRO VAL SEQRES 5 A 371 VAL PHE LEU GLN HIS GLY LEU LEU ALA SER ALA THR ASN SEQRES 6 A 371 TRP ILE SER ASN LEU PRO ASN ASN SER LEU ALA PHE ILE SEQRES 7 A 371 LEU ALA ASP ALA GLY TYR ASP VAL TRP LEU GLY ASN SER SEQRES 8 A 371 ARG GLY ASN THR TRP ALA ARG ARG ASN LEU TYR TYR SER SEQRES 9 A 371 PRO ASP SER VAL GLU PHE TRP ALA PHE SER PHE ASP GLU SEQRES 10 A 371 MET ALA LYS TYR ASP LEU PRO ALA THR ILE ASP PHE ILE SEQRES 11 A 371 VAL LYS LYS THR GLY GLN LYS GLN LEU HIS TYR VAL GLY SEQRES 12 A 371 HIS SER GLN GLY THR THR ILE GLY PHE ILE ALA PHE SER SEQRES 13 A 371 THR ASN PRO SER LEU ALA LYS ARG ILE LYS THR PHE TYR SEQRES 14 A 371 ALA LEU ALA PRO VAL ALA THR VAL LYS TYR THR LYS SER SEQRES 15 A 371 LEU ILE ASN LYS LEU ARG PHE VAL PRO GLN SER LEU PHE SEQRES 16 A 371 LYS PHE ILE PHE GLY ASP LYS ILE PHE TYR PRO HIS ASN SEQRES 17 A 371 PHE PHE ASP GLN PHE LEU ALA THR GLU VAL CYS SER ARG SEQRES 18 A 371 GLU MET LEU ASN LEU LEU CYS SER ASN ALA LEU PHE ILE SEQRES 19 A 371 ILE CYS GLY PHE ASP SER LYS ASN PHE ASN THR SER ARG SEQRES 20 A 371 LEU ASP VAL TYR LEU SER HIS ASN PRO ALA GLY THR SER SEQRES 21 A 371 VAL GLN ASN MET PHE HIS TRP THR GLN ALA VAL LYS SER SEQRES 22 A 371 GLY LYS PHE GLN ALA TYR ASP TRP GLY SER PRO VAL GLN SEQRES 23 A 371 ASN ARG MET HIS TYR ASP GLN SER GLN PRO PRO TYR TYR SEQRES 24 A 371 ASN VAL THR ALA MET ASN VAL PRO ILE ALA VAL TRP ASN SEQRES 25 A 371 GLY GLY LYS ASP LEU LEU ALA ASP PRO GLN ASP VAL GLY SEQRES 26 A 371 LEU LEU LEU PRO LYS LEU PRO ASN LEU ILE TYR HIS LYS SEQRES 27 A 371 GLU ILE PRO PHE TYR ASN HIS LEU ASP PHE ILE TRP ALA SEQRES 28 A 371 MET ASP ALA PRO GLN GLU VAL TYR ASN ASP ILE VAL SER SEQRES 29 A 371 MET ILE SER GLU ASP LYS LYS SEQRES 1 B 371 SER PRO GLU VAL THR MET ASN ILE SER GLN MET ILE THR SEQRES 2 B 371 TYR TRP GLY TYR PRO ASN GLU GLU TYR GLU VAL VAL THR SEQRES 3 B 371 GLU ASP GLY TYR ILE LEU GLU VAL ASN ARG ILE PRO TYR SEQRES 4 B 371 GLY LYS LYS ASN SER GLY ASN THR GLY GLN ARG PRO VAL SEQRES 5 B 371 VAL PHE LEU GLN HIS GLY LEU LEU ALA SER ALA THR ASN SEQRES 6 B 371 TRP ILE SER ASN LEU PRO ASN ASN SER LEU ALA PHE ILE SEQRES 7 B 371 LEU ALA ASP ALA GLY TYR ASP VAL TRP LEU GLY ASN SER SEQRES 8 B 371 ARG GLY ASN THR TRP ALA ARG ARG ASN LEU TYR TYR SER SEQRES 9 B 371 PRO ASP SER VAL GLU PHE TRP ALA PHE SER PHE ASP GLU SEQRES 10 B 371 MET ALA LYS TYR ASP LEU PRO ALA THR ILE ASP PHE ILE SEQRES 11 B 371 VAL LYS LYS THR GLY GLN LYS GLN LEU HIS TYR VAL GLY SEQRES 12 B 371 HIS SER GLN GLY THR THR ILE GLY PHE ILE ALA PHE SER SEQRES 13 B 371 THR ASN PRO SER LEU ALA LYS ARG ILE LYS THR PHE TYR SEQRES 14 B 371 ALA LEU ALA PRO VAL ALA THR VAL LYS TYR THR LYS SER SEQRES 15 B 371 LEU ILE ASN LYS LEU ARG PHE VAL PRO GLN SER LEU PHE SEQRES 16 B 371 LYS PHE ILE PHE GLY ASP LYS ILE PHE TYR PRO HIS ASN SEQRES 17 B 371 PHE PHE ASP GLN PHE LEU ALA THR GLU VAL CYS SER ARG SEQRES 18 B 371 GLU MET LEU ASN LEU LEU CYS SER ASN ALA LEU PHE ILE SEQRES 19 B 371 ILE CYS GLY PHE ASP SER LYS ASN PHE ASN THR SER ARG SEQRES 20 B 371 LEU ASP VAL TYR LEU SER HIS ASN PRO ALA GLY THR SER SEQRES 21 B 371 VAL GLN ASN MET PHE HIS TRP THR GLN ALA VAL LYS SER SEQRES 22 B 371 GLY LYS PHE GLN ALA TYR ASP TRP GLY SER PRO VAL GLN SEQRES 23 B 371 ASN ARG MET HIS TYR ASP GLN SER GLN PRO PRO TYR TYR SEQRES 24 B 371 ASN VAL THR ALA MET ASN VAL PRO ILE ALA VAL TRP ASN SEQRES 25 B 371 GLY GLY LYS ASP LEU LEU ALA ASP PRO GLN ASP VAL GLY SEQRES 26 B 371 LEU LEU LEU PRO LYS LEU PRO ASN LEU ILE TYR HIS LYS SEQRES 27 B 371 GLU ILE PRO PHE TYR ASN HIS LEU ASP PHE ILE TRP ALA SEQRES 28 B 371 MET ASP ALA PRO GLN GLU VAL TYR ASN ASP ILE VAL SER SEQRES 29 B 371 MET ILE SER GLU ASP LYS LYS MODRES 1HLG ASN A 15 ASN GLYCOSYLATION SITE MODRES 1HLG ASN A 80 ASN GLYCOSYLATION SITE MODRES 1HLG ASN A 252 ASN GLYCOSYLATION SITE MODRES 1HLG ASN A 308 ASN GLYCOSYLATION SITE MODRES 1HLG ASN B 15 ASN GLYCOSYLATION SITE MODRES 1HLG ASN B 80 ASN GLYCOSYLATION SITE MODRES 1HLG ASN B 252 ASN GLYCOSYLATION SITE MODRES 1HLG ASN B 308 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET NAG A 1 14 HET NAG A 2 14 HET NAG A 5 14 HET NAG B 1 14 HET NAG B 2 14 HET NAG B 5 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG 10(C8 H15 N O6) FORMUL 11 HOH *92(H2 O) HELIX 1 1 SER A 9 MET A 14 5 6 HELIX 2 2 ASN A 15 TRP A 23 1 9 HELIX 3 3 SER A 70 SER A 76 5 7 HELIX 4 4 SER A 82 ALA A 90 1 9 HELIX 5 5 VAL A 116 ALA A 120 5 5 HELIX 6 6 SER A 122 TYR A 129 1 8 HELIX 7 7 TYR A 129 GLY A 143 1 15 HELIX 8 8 SER A 153 ASN A 166 1 14 HELIX 9 9 ASN A 166 LYS A 171 1 6 HELIX 10 10 SER A 190 VAL A 198 5 9 HELIX 11 11 PRO A 199 GLY A 208 1 10 HELIX 12 12 PHE A 221 MET A 231 1 11 HELIX 13 13 LEU A 232 SER A 237 1 6 HELIX 14 14 ASN A 238 GLY A 245 1 8 HELIX 15 15 ASN A 252 SER A 254 5 3 HELIX 16 16 ARG A 255 SER A 261 1 7 HELIX 17 17 SER A 268 GLY A 282 1 15 HELIX 18 18 SER A 291 ASP A 300 1 10 HELIX 19 19 ASN A 308 MET A 312 5 5 HELIX 20 20 ASP A 328 LEU A 339 1 12 HELIX 21 21 LEU A 354 ALA A 359 1 6 HELIX 22 22 ASP A 361 VAL A 366 1 6 HELIX 23 23 VAL A 366 SER A 375 1 10 HELIX 24 24 SER B 9 MET B 14 5 6 HELIX 25 25 ASN B 15 TRP B 23 1 9 HELIX 26 26 SER B 70 SER B 76 5 7 HELIX 27 27 SER B 82 ALA B 90 1 9 HELIX 28 28 VAL B 116 ALA B 120 5 5 HELIX 29 29 SER B 122 TYR B 129 1 8 HELIX 30 30 TYR B 129 GLY B 143 1 15 HELIX 31 31 SER B 153 SER B 164 1 12 HELIX 32 32 ASN B 166 LYS B 171 1 6 HELIX 33 33 SER B 190 VAL B 198 5 9 HELIX 34 34 PRO B 199 GLY B 208 1 10 HELIX 35 35 PHE B 221 MET B 231 1 11 HELIX 36 36 LEU B 232 SER B 237 1 6 HELIX 37 37 ASN B 238 GLY B 245 1 8 HELIX 38 38 ASN B 252 SER B 254 5 3 HELIX 39 39 ARG B 255 SER B 261 1 7 HELIX 40 40 SER B 268 GLY B 282 1 15 HELIX 41 41 SER B 291 ASP B 300 1 10 HELIX 42 42 ASN B 308 MET B 312 5 5 HELIX 43 43 ASP B 328 LEU B 339 1 12 HELIX 44 44 LEU B 354 ALA B 359 1 6 HELIX 45 45 ASP B 361 VAL B 366 1 6 HELIX 46 46 VAL B 366 SER B 375 1 10 SHEET 1 A 8 GLU A 28 VAL A 33 0 SHEET 2 A 8 ILE A 39 ILE A 45 -1 N LEU A 40 O VAL A 32 SHEET 3 A 8 ASP A 93 LEU A 96 -1 O VAL A 94 N ILE A 45 SHEET 4 A 8 VAL A 60 GLN A 64 1 O VAL A 61 N TRP A 95 SHEET 5 A 8 LEU A 147 HIS A 152 1 N HIS A 148 O VAL A 60 SHEET 6 A 8 ILE A 173 LEU A 179 1 N LYS A 174 O LEU A 147 SHEET 7 A 8 ILE A 316 GLY A 321 1 O ALA A 317 N ALA A 178 SHEET 8 A 8 LEU A 342 ILE A 348 1 N ILE A 343 O ILE A 316 SHEET 1 B 8 GLU B 28 VAL B 33 0 SHEET 2 B 8 TYR B 38 ILE B 45 -1 N LEU B 40 O VAL B 32 SHEET 3 B 8 ASP B 93 LEU B 96 -1 O VAL B 94 N ILE B 45 SHEET 4 B 8 VAL B 60 GLN B 64 1 N VAL B 61 O ASP B 93 SHEET 5 B 8 LEU B 147 HIS B 152 1 N HIS B 148 O VAL B 60 SHEET 6 B 8 ILE B 173 LEU B 179 1 N LYS B 174 O LEU B 147 SHEET 7 B 8 ILE B 316 GLY B 321 1 O ALA B 317 N ALA B 178 SHEET 8 B 8 LEU B 342 ILE B 348 1 N ILE B 343 O ILE B 316 SHEET 1 C 3 GLU B 28 VAL B 33 0 SHEET 2 C 3 TYR B 38 ILE B 45 -1 N LEU B 40 O VAL B 32 SHEET 3 C 3 ARG B 107 ASN B 108 -1 O ARG B 107 N ILE B 39 SSBOND 1 CYS A 227 CYS A 236 1555 1555 2.05 SSBOND 2 CYS B 227 CYS B 236 1555 1555 2.05 LINK C1 NAG A 1 ND2 ASN A 15 1555 1555 1.46 LINK C1 NAG A 2 ND2 ASN A 80 1555 1555 1.46 LINK C1 NAG A 5 ND2 ASN A 308 1555 1555 1.47 LINK ND2 ASN A 252 C1 NAG C 1 1555 1555 1.44 LINK C1 NAG B 1 ND2 ASN B 15 1555 1555 1.46 LINK C1 NAG B 2 ND2 ASN B 80 1555 1555 1.46 LINK C1 NAG B 5 ND2 ASN B 308 1555 1555 1.45 LINK ND2 ASN B 252 C1 NAG D 1 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.39 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.39 CISPEP 1 ASN A 263 PRO A 264 0 -0.34 CISPEP 2 ASN B 263 PRO B 264 0 -0.36 SITE 1 SA 3 SER A 153 ASP A 324 HIS A 353 SITE 1 SB 3 SER B 153 ASP B 324 HIS B 353 CRYST1 244.330 244.330 244.330 90.00 90.00 90.00 I 21 3 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004093 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004093 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004093 0.00000