PDB Short entry for 1IM8 HEADER TRANSFERASE 10-MAY-01 1IM8 TITLE CRYSTAL STRUCTURE OF YECO FROM HAEMOPHILUS INFLUENZAE (HI0319), A TITLE 2 METHYLTRANSFERASE WITH A BOUND S-ADENOSYLHOMOCYSTEINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: YECO; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: METHYLTRANSFERASE, HYPOTHETICAL PROTEIN HI0319; COMPND 5 EC: 2.1.1.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HAEMOPHILUS INFLUENZAE RD; SOURCE 3 ORGANISM_TAXID: 71421; SOURCE 4 STRAIN: KW20; SOURCE 5 GENE: HI0319; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B834(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET15B KEYWDS METHYLTRANSFERASE, ADENOSYLHOMOCYSTEINE, STRUCTURAL GENOMICS, KEYWDS 2 HYPOTHETICAL PROTEIN, STRUCTURE 2 FUNCTION PROJECT, S2F, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.LIM,H.ZHANG,A.TEMPCZYK,N.BONANDER,J.TOEDT,A.HOWARD,E.EISENSTEIN, AUTHOR 2 O.HERZBERG,STRUCTURE 2 FUNCTION PROJECT (S2F) REVDAT 3 13-JUL-11 1IM8 1 VERSN REVDAT 2 24-FEB-09 1IM8 1 VERSN REVDAT 1 07-NOV-01 1IM8 0 JRNL AUTH K.LIM,H.ZHANG,A.TEMPCZYK,N.BONANDER,J.TOEDT,A.HOWARD, JRNL AUTH 2 E.EISENSTEIN,O.HERZBERG JRNL TITL CRYSTAL STRUCTURE OF YECO FROM HAEMOPHILUS INFLUENZAE JRNL TITL 2 (HI0319) REVEALS A METHYLTRANSFERASE FOLD AND A BOUND JRNL TITL 3 S-ADENOSYLHOMOCYSTEINE. JRNL REF PROTEINS V. 45 397 2001 JRNL REFN ISSN 0887-3585 JRNL PMID 11746687 JRNL DOI 10.1002/PROT.10004 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 24873 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1446 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3589 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 237 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.017 REMARK 3 BOND ANGLES (DEGREES) : 1.80 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1IM8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-MAY-01. REMARK 100 THE RCSB ID CODE IS RCSB013407. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9782, 0.9778, 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XENGEN REMARK 200 DATA SCALING SOFTWARE : XENGEN REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30031 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 74.6 REMARK 200 DATA REDUNDANCY IN SHELL : 1.60 REMARK 200 R MERGE FOR SHELL (I) : 0.35100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SOLVE, MLPHARE, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 % SATURATED AMMONIUM SULFATE, 100MM REMARK 280 NAHEPES WITH PROTEIN SOLUTION (10MG/ML IN 150MM NACL, 10MM REMARK 280 NAHEPES, PH 8.0, 1MM DTT AND 0.5MM EDTA) , PH 7.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 106.37333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 212.74667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 159.56000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 265.93333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 53.18667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 106.37333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 212.74667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 265.93333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 159.56000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 53.18667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 129.85185 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 VAL A 2 REMARK 465 LYS A 3 REMARK 465 ASP A 4 REMARK 465 THR A 5 REMARK 465 LEU A 6 REMARK 465 PHE A 7 REMARK 465 SER A 8 REMARK 465 THR A 9 REMARK 465 PRO A 10 REMARK 465 ILE A 11 REMARK 465 ALA A 12 REMARK 465 LYS A 13 REMARK 465 LEU A 14 REMARK 465 GLY A 15 REMARK 465 ASP A 16 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MSE B 1 REMARK 465 VAL B 2 REMARK 465 LYS B 3 REMARK 465 ASP B 4 REMARK 465 THR B 5 REMARK 465 LEU B 6 REMARK 465 PHE B 7 REMARK 465 SER B 8 REMARK 465 THR B 9 REMARK 465 PRO B 10 REMARK 465 ILE B 11 REMARK 465 ALA B 12 REMARK 465 LYS B 13 REMARK 465 LEU B 14 REMARK 465 GLY B 15 REMARK 465 ASP B 16 REMARK 465 PHE B 17 REMARK 465 ILE B 18 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 65 -118.46 48.95 REMARK 500 PHE A 232 -125.64 58.80 REMARK 500 PHE B 27 -64.02 -27.92 REMARK 500 SER B 65 -114.74 56.34 REMARK 500 ASN B 78 59.51 -118.64 REMARK 500 PHE B 232 -125.36 62.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAI A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAI B 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HI0319 RELATED DB: TARGETDB DBREF 1IM8 A 1 241 UNP P43985 Y319_HAEIN 1 241 DBREF 1IM8 B 1 241 UNP P43985 Y319_HAEIN 1 241 SEQADV 1IM8 GLY A -2 UNP P43985 CLONING ARTIFACT SEQADV 1IM8 SER A -1 UNP P43985 CLONING ARTIFACT SEQADV 1IM8 HIS A 0 UNP P43985 CLONING ARTIFACT SEQADV 1IM8 MSE A 30 UNP P43985 MET 30 MODIFIED RESIDUE SEQADV 1IM8 MSE A 47 UNP P43985 MET 47 MODIFIED RESIDUE SEQADV 1IM8 MSE A 93 UNP P43985 MET 93 MODIFIED RESIDUE SEQADV 1IM8 MSE A 127 UNP P43985 MET 127 MODIFIED RESIDUE SEQADV 1IM8 MSE A 205 UNP P43985 MET 205 MODIFIED RESIDUE SEQADV 1IM8 MSE A 237 UNP P43985 MET 237 MODIFIED RESIDUE SEQADV 1IM8 GLY B -2 UNP P43985 CLONING ARTIFACT SEQADV 1IM8 SER B -1 UNP P43985 CLONING ARTIFACT SEQADV 1IM8 HIS B 0 UNP P43985 CLONING ARTIFACT SEQADV 1IM8 MSE B 30 UNP P43985 MET 30 MODIFIED RESIDUE SEQADV 1IM8 MSE B 47 UNP P43985 MET 47 MODIFIED RESIDUE SEQADV 1IM8 MSE B 93 UNP P43985 MET 93 MODIFIED RESIDUE SEQADV 1IM8 MSE B 127 UNP P43985 MET 127 MODIFIED RESIDUE SEQADV 1IM8 MSE B 205 UNP P43985 MET 205 MODIFIED RESIDUE SEQADV 1IM8 MSE B 237 UNP P43985 MET 237 MODIFIED RESIDUE SEQRES 1 A 244 GLY SER HIS MSE VAL LYS ASP THR LEU PHE SER THR PRO SEQRES 2 A 244 ILE ALA LYS LEU GLY ASP PHE ILE PHE ASP GLU ASN VAL SEQRES 3 A 244 ALA GLU VAL PHE PRO ASP MSE ILE GLN ARG SER VAL PRO SEQRES 4 A 244 GLY TYR SER ASN ILE ILE THR ALA ILE GLY MSE LEU ALA SEQRES 5 A 244 GLU ARG PHE VAL THR ALA ASP SER ASN VAL TYR ASP LEU SEQRES 6 A 244 GLY CYS SER ARG GLY ALA ALA THR LEU SER ALA ARG ARG SEQRES 7 A 244 ASN ILE ASN GLN PRO ASN VAL LYS ILE ILE GLY ILE ASP SEQRES 8 A 244 ASN SER GLN PRO MSE VAL GLU ARG CYS ARG GLN HIS ILE SEQRES 9 A 244 ALA ALA TYR HIS SER GLU ILE PRO VAL GLU ILE LEU CYS SEQRES 10 A 244 ASN ASP ILE ARG HIS VAL GLU ILE LYS ASN ALA SER MSE SEQRES 11 A 244 VAL ILE LEU ASN PHE THR LEU GLN PHE LEU PRO PRO GLU SEQRES 12 A 244 ASP ARG ILE ALA LEU LEU THR LYS ILE TYR GLU GLY LEU SEQRES 13 A 244 ASN PRO ASN GLY VAL LEU VAL LEU SER GLU LYS PHE ARG SEQRES 14 A 244 PHE GLU ASP THR LYS ILE ASN HIS LEU LEU ILE ASP LEU SEQRES 15 A 244 HIS HIS GLN PHE LYS ARG ALA ASN GLY TYR SER GLU LEU SEQRES 16 A 244 GLU VAL SER GLN LYS ARG THR ALA LEU GLU ASN VAL MSE SEQRES 17 A 244 ARG THR ASP SER ILE GLU THR HIS LYS VAL ARG LEU LYS SEQRES 18 A 244 ASN VAL GLY PHE SER GLN VAL GLU LEU TRP PHE GLN CYS SEQRES 19 A 244 PHE ASN PHE GLY SER MSE ILE ALA VAL LYS SEQRES 1 B 244 GLY SER HIS MSE VAL LYS ASP THR LEU PHE SER THR PRO SEQRES 2 B 244 ILE ALA LYS LEU GLY ASP PHE ILE PHE ASP GLU ASN VAL SEQRES 3 B 244 ALA GLU VAL PHE PRO ASP MSE ILE GLN ARG SER VAL PRO SEQRES 4 B 244 GLY TYR SER ASN ILE ILE THR ALA ILE GLY MSE LEU ALA SEQRES 5 B 244 GLU ARG PHE VAL THR ALA ASP SER ASN VAL TYR ASP LEU SEQRES 6 B 244 GLY CYS SER ARG GLY ALA ALA THR LEU SER ALA ARG ARG SEQRES 7 B 244 ASN ILE ASN GLN PRO ASN VAL LYS ILE ILE GLY ILE ASP SEQRES 8 B 244 ASN SER GLN PRO MSE VAL GLU ARG CYS ARG GLN HIS ILE SEQRES 9 B 244 ALA ALA TYR HIS SER GLU ILE PRO VAL GLU ILE LEU CYS SEQRES 10 B 244 ASN ASP ILE ARG HIS VAL GLU ILE LYS ASN ALA SER MSE SEQRES 11 B 244 VAL ILE LEU ASN PHE THR LEU GLN PHE LEU PRO PRO GLU SEQRES 12 B 244 ASP ARG ILE ALA LEU LEU THR LYS ILE TYR GLU GLY LEU SEQRES 13 B 244 ASN PRO ASN GLY VAL LEU VAL LEU SER GLU LYS PHE ARG SEQRES 14 B 244 PHE GLU ASP THR LYS ILE ASN HIS LEU LEU ILE ASP LEU SEQRES 15 B 244 HIS HIS GLN PHE LYS ARG ALA ASN GLY TYR SER GLU LEU SEQRES 16 B 244 GLU VAL SER GLN LYS ARG THR ALA LEU GLU ASN VAL MSE SEQRES 17 B 244 ARG THR ASP SER ILE GLU THR HIS LYS VAL ARG LEU LYS SEQRES 18 B 244 ASN VAL GLY PHE SER GLN VAL GLU LEU TRP PHE GLN CYS SEQRES 19 B 244 PHE ASN PHE GLY SER MSE ILE ALA VAL LYS MODRES 1IM8 MSE A 30 MET SELENOMETHIONINE MODRES 1IM8 MSE A 47 MET SELENOMETHIONINE MODRES 1IM8 MSE A 93 MET SELENOMETHIONINE MODRES 1IM8 MSE A 127 MET SELENOMETHIONINE MODRES 1IM8 MSE A 205 MET SELENOMETHIONINE MODRES 1IM8 MSE A 237 MET SELENOMETHIONINE MODRES 1IM8 MSE B 30 MET SELENOMETHIONINE MODRES 1IM8 MSE B 47 MET SELENOMETHIONINE MODRES 1IM8 MSE B 93 MET SELENOMETHIONINE MODRES 1IM8 MSE B 127 MET SELENOMETHIONINE MODRES 1IM8 MSE B 205 MET SELENOMETHIONINE MODRES 1IM8 MSE B 237 MET SELENOMETHIONINE HET MSE A 30 8 HET MSE A 47 8 HET MSE A 93 8 HET MSE A 127 8 HET MSE A 205 8 HET MSE A 237 8 HET MSE B 30 8 HET MSE B 47 8 HET MSE B 93 8 HET MSE B 127 8 HET MSE B 205 8 HET MSE B 237 8 HET CL A 300 1 HET CL B 301 1 HET SAI A 302 26 HET SAI B 303 26 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM SAI S-ADENOSYL-L-HOMOSELENOCYSTEINE FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 CL 2(CL 1-) FORMUL 5 SAI 2(C14 H20 N6 O5 SE) FORMUL 7 HOH *237(H2 O) HELIX 1 1 ASP A 20 PHE A 27 1 8 HELIX 2 2 VAL A 26 VAL A 35 1 10 HELIX 3 3 GLY A 37 VAL A 53 1 17 HELIX 4 4 GLY A 67 ASN A 76 1 10 HELIX 5 5 SER A 90 ALA A 103 1 14 HELIX 6 6 THR A 133 LEU A 137 5 5 HELIX 7 7 PRO A 138 GLU A 140 5 3 HELIX 8 8 ASP A 141 GLY A 152 1 12 HELIX 9 9 ASP A 169 ASN A 187 1 19 HELIX 10 10 GLY A 188 GLU A 193 5 6 HELIX 11 11 VAL A 194 MSE A 205 1 12 HELIX 12 12 SER A 209 GLY A 221 1 13 HELIX 13 13 ASP B 20 PHE B 27 1 8 HELIX 14 14 VAL B 26 VAL B 35 1 10 HELIX 15 15 GLY B 37 VAL B 53 1 17 HELIX 16 16 GLY B 67 ARG B 75 1 9 HELIX 17 17 SER B 90 ALA B 103 1 14 HELIX 18 18 ASP B 116 VAL B 120 5 5 HELIX 19 19 THR B 133 LEU B 137 5 5 HELIX 20 20 PRO B 138 GLU B 140 5 3 HELIX 21 21 ASP B 141 GLY B 152 1 12 HELIX 22 22 ASP B 169 ASN B 187 1 19 HELIX 23 23 GLY B 188 LEU B 192 5 5 HELIX 24 24 VAL B 194 MSE B 205 1 12 HELIX 25 25 SER B 209 GLY B 221 1 13 SHEET 1 A 7 VAL A 110 LEU A 113 0 SHEET 2 A 7 LYS A 83 ILE A 87 1 O ILE A 84 N GLU A 111 SHEET 3 A 7 ASN A 58 LEU A 62 1 O VAL A 59 N ILE A 85 SHEET 4 A 7 ALA A 125 ASN A 131 1 N SER A 126 O ASN A 58 SHEET 5 A 7 LEU A 153 LYS A 164 1 N ASN A 154 O ALA A 125 SHEET 6 A 7 PHE A 234 VAL A 240 -1 O GLY A 235 N GLU A 163 SHEET 7 A 7 GLN A 224 CYS A 231 -1 O GLN A 224 N VAL A 240 SHEET 1 B 7 VAL B 110 CYS B 114 0 SHEET 2 B 7 VAL B 82 ASP B 88 1 O ILE B 84 N GLU B 111 SHEET 3 B 7 SER B 57 LEU B 62 1 O SER B 57 N LYS B 83 SHEET 4 B 7 ALA B 125 ASN B 131 1 N SER B 126 O ASN B 58 SHEET 5 B 7 LEU B 153 LYS B 164 1 N ASN B 154 O ALA B 125 SHEET 6 B 7 PHE B 234 VAL B 240 -1 O GLY B 235 N GLU B 163 SHEET 7 B 7 GLN B 224 CYS B 231 -1 O GLN B 224 N VAL B 240 LINK C ASP A 29 N MSE A 30 1555 1555 1.33 LINK C MSE A 30 N ILE A 31 1555 1555 1.33 LINK C GLY A 46 N MSE A 47 1555 1555 1.34 LINK C MSE A 47 N LEU A 48 1555 1555 1.33 LINK C PRO A 92 N MSE A 93 1555 1555 1.33 LINK C MSE A 93 N VAL A 94 1555 1555 1.34 LINK C SER A 126 N MSE A 127 1555 1555 1.34 LINK C MSE A 127 N VAL A 128 1555 1555 1.32 LINK C VAL A 204 N MSE A 205 1555 1555 1.33 LINK C MSE A 205 N ARG A 206 1555 1555 1.33 LINK C SER A 236 N MSE A 237 1555 1555 1.32 LINK C MSE A 237 N ILE A 238 1555 1555 1.33 LINK C ASP B 29 N MSE B 30 1555 1555 1.32 LINK C MSE B 30 N ILE B 31 1555 1555 1.33 LINK C GLY B 46 N MSE B 47 1555 1555 1.33 LINK C MSE B 47 N LEU B 48 1555 1555 1.32 LINK C PRO B 92 N MSE B 93 1555 1555 1.33 LINK C MSE B 93 N VAL B 94 1555 1555 1.34 LINK C SER B 126 N MSE B 127 1555 1555 1.33 LINK C MSE B 127 N VAL B 128 1555 1555 1.31 LINK C VAL B 204 N MSE B 205 1555 1555 1.33 LINK C MSE B 205 N ARG B 206 1555 1555 1.32 LINK C SER B 236 N MSE B 237 1555 1555 1.33 LINK C MSE B 237 N ILE B 238 1555 1555 1.32 SITE 1 AC1 2 ARG A 198 SAI A 302 SITE 1 AC2 3 PHE B 136 ARG B 198 SAI B 303 SITE 1 AC3 16 PHE A 19 PHE A 27 TYR A 38 GLY A 63 SITE 2 AC3 16 SER A 65 ASP A 88 ASN A 89 MSE A 93 SITE 3 AC3 16 ASN A 115 ASP A 116 ILE A 117 ASN A 131 SITE 4 AC3 16 CL A 300 HOH A 418 HOH A 424 HOH A 457 SITE 1 AC4 18 PHE B 19 PHE B 27 TYR B 38 GLY B 63 SITE 2 AC4 18 SER B 65 ASP B 88 ASN B 89 MSE B 93 SITE 3 AC4 18 ASN B 115 ASP B 116 ILE B 117 ASN B 131 SITE 4 AC4 18 PHE B 132 PHE B 136 CL B 301 HOH B 415 SITE 5 AC4 18 HOH B 443 HOH B 598 CRYST1 74.970 74.970 319.120 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013339 0.007701 0.000000 0.00000 SCALE2 0.000000 0.015402 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003134 0.00000