PDB Short entry for 1IUY HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 08-MAR-02 1IUY TITLE SOLUTION STRUCTURE OF THE CULLIN-3 HOMOLOGUE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CULLIN-3 HOMOLOGUE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: P011101-16; SOURCE 7 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS WINGED HELIX, STRUCTURAL GENOMICS, RIKEN STRUCTURAL KEYWDS 2 GENOMICS/PROTEOMICS INITIATIVE, RSGI, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 4 21-DEC-22 1IUY 1 SEQADV REVDAT 3 23-FEB-22 1IUY 1 REMARK REVDAT 2 24-FEB-09 1IUY 1 VERSN REVDAT 1 07-OCT-03 1IUY 0 JRNL AUTH M.INOUE,T.KIGAWA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE CULLIN-3 HOMOLOGUE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 1.8, CNS 1.0 REMARK 3 AUTHORS : DELAGLIO (NMRPIPE), BRUNGER (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1IUY COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-MAR-02. REMARK 100 THE DEPOSITION ID IS D_1000005300. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 100MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM PROTEIN U-15N,13C; 20MM REMARK 210 SODIUM PHOSPHATE BUFFER; 100MM REMARK 210 NACL; 90% H2O,10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS 1.0 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS,SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (RES=RESIDUE NAME; REMARK 470 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 470 MODELS 1-10 REMARK 470 RES CSSEQI ATOMS REMARK 470 ALA A 92 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 4 153.36 61.75 REMARK 500 1 GLN A 5 -169.49 -110.68 REMARK 500 1 ASP A 9 -61.55 -178.67 REMARK 500 1 GLU A 11 38.00 -169.49 REMARK 500 1 THR A 15 -57.57 -139.30 REMARK 500 1 ARG A 16 76.18 60.32 REMARK 500 1 ASP A 22 -39.07 -177.75 REMARK 500 1 LYS A 24 30.16 -98.40 REMARK 500 1 HIS A 25 -44.13 -137.54 REMARK 500 1 LYS A 39 -67.87 68.46 REMARK 500 1 LEU A 54 50.47 -115.99 REMARK 500 1 ARG A 57 -71.07 -94.20 REMARK 500 2 ALA A 2 161.53 60.61 REMARK 500 2 ALA A 3 95.87 60.81 REMARK 500 2 GLU A 7 151.85 61.94 REMARK 500 2 SER A 8 97.24 -169.93 REMARK 500 2 ASP A 9 79.67 -116.61 REMARK 500 2 GLU A 11 111.12 60.64 REMARK 500 2 LYS A 13 139.79 63.67 REMARK 500 2 GLU A 14 44.52 -154.83 REMARK 500 2 THR A 15 43.42 -154.24 REMARK 500 2 LYS A 18 119.58 -162.57 REMARK 500 2 VAL A 19 -68.85 -130.44 REMARK 500 2 ASP A 21 73.85 59.84 REMARK 500 2 LYS A 24 52.77 -107.84 REMARK 500 2 HIS A 25 -46.73 -151.18 REMARK 500 2 LYS A 39 -76.30 64.75 REMARK 500 2 LEU A 54 42.20 -96.18 REMARK 500 2 SER A 61 97.25 -179.87 REMARK 500 2 ALA A 79 140.36 -176.90 REMARK 500 2 ASP A 84 151.38 174.43 REMARK 500 2 VAL A 91 55.20 -109.92 REMARK 500 3 GLU A 7 -49.34 -147.42 REMARK 500 3 SER A 8 -79.31 64.30 REMARK 500 3 LYS A 13 79.53 -100.79 REMARK 500 3 THR A 15 -51.43 -137.52 REMARK 500 3 GLN A 17 -53.42 -137.56 REMARK 500 3 VAL A 19 -57.02 -127.98 REMARK 500 3 ASP A 20 176.05 60.31 REMARK 500 3 LYS A 39 -79.59 63.56 REMARK 500 3 LEU A 54 40.37 -102.77 REMARK 500 3 PHE A 58 -167.69 -166.59 REMARK 500 3 ARG A 85 31.70 -99.46 REMARK 500 3 LYS A 86 25.73 -147.94 REMARK 500 4 ALA A 3 29.29 -146.70 REMARK 500 4 LYS A 4 84.36 58.12 REMARK 500 4 ARG A 12 149.95 64.90 REMARK 500 4 THR A 15 36.75 -142.32 REMARK 500 4 GLN A 17 -81.05 62.48 REMARK 500 4 ASP A 22 -63.16 -123.92 REMARK 500 REMARK 500 THIS ENTRY HAS 128 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMK001000556.1 RELATED DB: TARGETDB DBREF 1IUY A 2 92 UNP Q9JLV5 CUL3_MOUSE 1 91 SEQADV 1IUY MET A 1 UNP Q9JLV5 INITIATING METHIONINE SEQRES 1 A 92 MET ALA ALA LYS GLN GLY GLU SER ASP PRO GLU ARG LYS SEQRES 2 A 92 GLU THR ARG GLN LYS VAL ASP ASP ASP ARG LYS HIS GLU SEQRES 3 A 92 ILE GLU ALA ALA ILE VAL ARG ILE MET LYS SER ARG LYS SEQRES 4 A 92 LYS MET GLN HIS ASN VAL LEU VAL ALA GLU VAL THR GLN SEQRES 5 A 92 GLN LEU LYS ALA ARG PHE LEU PRO SER PRO VAL VAL ILE SEQRES 6 A 92 LYS LYS ARG ILE GLU GLY LEU ILE GLU ARG GLU TYR LEU SEQRES 7 A 92 ALA ARG THR PRO GLU ASP ARG LYS VAL TYR THR TYR VAL SEQRES 8 A 92 ALA HELIX 1 1 HIS A 25 LYS A 39 1 15 HELIX 2 2 HIS A 43 LEU A 54 1 12 HELIX 3 3 SER A 61 ARG A 75 1 15 SHEET 1 A 3 LYS A 40 GLN A 42 0 SHEET 2 A 3 VAL A 87 TYR A 90 -1 O TYR A 88 N MET A 41 SHEET 3 A 3 LEU A 78 ARG A 80 -1 N ALA A 79 O THR A 89 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000