PDB Short entry for 1IWG HEADER MEMBRANE PROTEIN 15-MAY-02 1IWG TITLE CRYSTAL STRUCTURE OF BACTERIAL MULTIDRUG EFFLUX TRANSPORTER ACRB COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACRB; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MULTIDRUG EFFLUX PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI K12; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: K12; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PUC-118 KEYWDS DRUG RESISTANCE, MULTIDRUG EFFLUX, TRANSPORTER, ANTIPORTER, MEMBRANE KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.MURAKAMI,R.NAKASHIMA,E.YAMASHITA,A.YAMAGUCHI REVDAT 4 27-DEC-23 1IWG 1 SEQADV REVDAT 3 13-JUL-11 1IWG 1 VERSN REVDAT 2 24-FEB-09 1IWG 1 VERSN REVDAT 1 23-OCT-02 1IWG 0 JRNL AUTH S.MURAKAMI,R.NAKASHIMA,E.YAMASHITA,A.YAMAGUCHI JRNL TITL CRYSTAL STRUCTURE OF BACTERIAL MULTIDRUG EFFLUX TRANSPORTER JRNL TITL 2 ACRB JRNL REF NATURE V. 419 587 2002 JRNL REFN ISSN 0028-0836 JRNL PMID 12374972 JRNL DOI 10.1038/NATURE01050 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 198425 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.290 REMARK 3 FREE R VALUE : 0.355 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 9921 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7639 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1IWG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-MAY-02. REMARK 100 THE DEPOSITION ID IS D_1000005340. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-FEB-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.1 REMARK 200 NUMBER OF CRYSTALS USED : 4 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.900 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAC SCIENCE DIP-2040 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 198425 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.36500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 2000, SODIUM PHOSPHATE, SODIUM REMARK 280 CITRATE, GLYCEROL, DODECYL MALTOSIDE, PH 6.1, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 72.26800 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 41.72395 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 173.05933 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 72.26800 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 41.72395 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 173.05933 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 72.26800 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 41.72395 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 173.05933 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 72.26800 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 41.72395 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 173.05933 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 72.26800 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 41.72395 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 173.05933 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 72.26800 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 41.72395 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 173.05933 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 83.44790 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 346.11867 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 83.44790 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 346.11867 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 83.44790 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 346.11867 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 83.44790 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 346.11867 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 83.44790 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 346.11867 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 83.44790 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 346.11867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 18180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 112580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -78.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 144.53600 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 72.26800 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 125.17185 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 ASN A 3 REMARK 465 PHE A 4 REMARK 465 PHE A 5 REMARK 465 ILE A 6 REMARK 465 PRO A 499 REMARK 465 ILE A 500 REMARK 465 ALA A 501 REMARK 465 LYS A 502 REMARK 465 GLY A 503 REMARK 465 ASP A 504 REMARK 465 HIS A 505 REMARK 465 GLY A 506 REMARK 465 GLU A 507 REMARK 465 GLY A 508 REMARK 465 LYS A 509 REMARK 465 LYS A 510 REMARK 465 GLY A 511 REMARK 465 PHE A 512 REMARK 465 ASP A 711 REMARK 465 THR A 860 REMARK 465 GLY A 861 REMARK 465 MET A 862 REMARK 465 SER A 863 REMARK 465 TYR A 864 REMARK 465 GLN A 865 REMARK 465 GLU A 866 REMARK 465 ARG A 867 REMARK 465 LEU A 868 REMARK 465 ASN A 1037 REMARK 465 GLU A 1038 REMARK 465 ASP A 1039 REMARK 465 ILE A 1040 REMARK 465 GLU A 1041 REMARK 465 HIS A 1042 REMARK 465 SER A 1043 REMARK 465 HIS A 1044 REMARK 465 THR A 1045 REMARK 465 VAL A 1046 REMARK 465 ASP A 1047 REMARK 465 HIS A 1048 REMARK 465 HIS A 1049 REMARK 465 HIS A 1050 REMARK 465 HIS A 1051 REMARK 465 HIS A 1052 REMARK 465 HIS A 1053 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O VAL A 946 N LYS A 950 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE2 HIS A 525 NE2 HIS A 525 4556 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 950 C - N - CA ANGL. DEV. = -28.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 9 -100.24 -53.81 REMARK 500 ILE A 10 -96.44 2.45 REMARK 500 PHE A 11 -63.65 -22.96 REMARK 500 LEU A 21 -77.68 -67.45 REMARK 500 ALA A 22 -47.98 -28.77 REMARK 500 LEU A 28 39.20 -75.56 REMARK 500 LYS A 29 17.77 -178.20 REMARK 500 ALA A 33 -173.98 -55.97 REMARK 500 GLN A 34 -148.16 -71.65 REMARK 500 THR A 37 109.98 -45.33 REMARK 500 TYR A 49 87.31 -164.16 REMARK 500 PRO A 50 111.63 -33.32 REMARK 500 ALA A 52 142.30 -29.59 REMARK 500 THR A 56 -70.39 -46.59 REMARK 500 THR A 60 -34.91 -139.39 REMARK 500 THR A 62 -87.99 -72.42 REMARK 500 GLN A 63 -37.56 -31.16 REMARK 500 ASN A 70 145.22 -170.95 REMARK 500 ASN A 74 136.63 64.50 REMARK 500 LEU A 75 129.15 170.69 REMARK 500 THR A 85 2.68 -66.60 REMARK 500 GLN A 89 85.11 -156.11 REMARK 500 VAL A 107 -15.54 -48.10 REMARK 500 PRO A 116 -6.15 -51.71 REMARK 500 GLN A 125 -159.36 -85.43 REMARK 500 SER A 133 4.13 -159.58 REMARK 500 SER A 134 43.45 19.02 REMARK 500 SER A 135 124.98 -178.62 REMARK 500 LEU A 137 -85.62 -165.63 REMARK 500 ASP A 146 -99.67 -64.39 REMARK 500 THR A 150 150.70 -36.56 REMARK 500 GLN A 151 23.92 -67.90 REMARK 500 GLU A 152 -32.53 -134.10 REMARK 500 ALA A 160 51.70 -144.19 REMARK 500 ASN A 161 -24.62 165.66 REMARK 500 ALA A 165 -72.15 -84.74 REMARK 500 SER A 167 14.90 -64.59 REMARK 500 ARG A 168 -28.58 -143.09 REMARK 500 SER A 170 87.27 -1.65 REMARK 500 PHE A 178 81.54 -68.78 REMARK 500 SER A 180 148.94 -174.38 REMARK 500 ALA A 183 147.28 -175.99 REMARK 500 ASN A 191 -70.13 -41.09 REMARK 500 LYS A 195 -0.97 -57.97 REMARK 500 GLN A 197 65.71 60.61 REMARK 500 LYS A 208 27.24 -68.51 REMARK 500 ALA A 209 -41.69 -138.57 REMARK 500 ALA A 212 145.30 -175.92 REMARK 500 LYS A 226 116.19 -33.32 REMARK 500 ALA A 236 -152.11 -109.81 REMARK 500 REMARK 500 THIS ENTRY HAS 159 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED DBREF 1IWG A 1 1049 UNP P31224 ACRB_ECOLI 1 1049 SEQADV 1IWG HIS A 1050 UNP P31224 EXPRESSION TAG SEQADV 1IWG HIS A 1051 UNP P31224 EXPRESSION TAG SEQADV 1IWG HIS A 1052 UNP P31224 EXPRESSION TAG SEQADV 1IWG HIS A 1053 UNP P31224 EXPRESSION TAG SEQRES 1 A 1053 MET PRO ASN PHE PHE ILE ASP ARG PRO ILE PHE ALA TRP SEQRES 2 A 1053 VAL ILE ALA ILE ILE ILE MET LEU ALA GLY GLY LEU ALA SEQRES 3 A 1053 ILE LEU LYS LEU PRO VAL ALA GLN TYR PRO THR ILE ALA SEQRES 4 A 1053 PRO PRO ALA VAL THR ILE SER ALA SER TYR PRO GLY ALA SEQRES 5 A 1053 ASP ALA LYS THR VAL GLN ASP THR VAL THR GLN VAL ILE SEQRES 6 A 1053 GLU GLN ASN MET ASN GLY ILE ASP ASN LEU MET TYR MET SEQRES 7 A 1053 SER SER ASN SER ASP SER THR GLY THR VAL GLN ILE THR SEQRES 8 A 1053 LEU THR PHE GLU SER GLY THR ASP ALA ASP ILE ALA GLN SEQRES 9 A 1053 VAL GLN VAL GLN ASN LYS LEU GLN LEU ALA MET PRO LEU SEQRES 10 A 1053 LEU PRO GLN GLU VAL GLN GLN GLN GLY VAL SER VAL GLU SEQRES 11 A 1053 LYS SER SER SER SER PHE LEU MET VAL VAL GLY VAL ILE SEQRES 12 A 1053 ASN THR ASP GLY THR MET THR GLN GLU ASP ILE SER ASP SEQRES 13 A 1053 TYR VAL ALA ALA ASN MET LYS ASP ALA ILE SER ARG THR SEQRES 14 A 1053 SER GLY VAL GLY ASP VAL GLN LEU PHE GLY SER GLN TYR SEQRES 15 A 1053 ALA MET ARG ILE TRP MET ASN PRO ASN GLU LEU ASN LYS SEQRES 16 A 1053 PHE GLN LEU THR PRO VAL ASP VAL ILE THR ALA ILE LYS SEQRES 17 A 1053 ALA GLN ASN ALA GLN VAL ALA ALA GLY GLN LEU GLY GLY SEQRES 18 A 1053 THR PRO PRO VAL LYS GLY GLN GLN LEU ASN ALA SER ILE SEQRES 19 A 1053 ILE ALA GLN THR ARG LEU THR SER THR GLU GLU PHE GLY SEQRES 20 A 1053 LYS ILE LEU LEU LYS VAL ASN GLN ASP GLY SER ARG VAL SEQRES 21 A 1053 LEU LEU ARG ASP VAL ALA LYS ILE GLU LEU GLY GLY GLU SEQRES 22 A 1053 ASN TYR ASP ILE ILE ALA GLU PHE ASN GLY GLN PRO ALA SEQRES 23 A 1053 SER GLY LEU GLY ILE LYS LEU ALA THR GLY ALA ASN ALA SEQRES 24 A 1053 LEU ASP THR ALA ALA ALA ILE ARG ALA GLU LEU ALA LYS SEQRES 25 A 1053 MET GLU PRO PHE PHE PRO SER GLY LEU LYS ILE VAL TYR SEQRES 26 A 1053 PRO TYR ASP THR THR PRO PHE VAL LYS ILE SER ILE HIS SEQRES 27 A 1053 GLU VAL VAL LYS THR LEU VAL GLU ALA ILE ILE LEU VAL SEQRES 28 A 1053 PHE LEU VAL MET TYR LEU PHE LEU GLN ASN PHE ARG ALA SEQRES 29 A 1053 THR LEU ILE PRO THR ILE ALA VAL PRO VAL VAL LEU LEU SEQRES 30 A 1053 GLY THR PHE ALA VAL LEU ALA ALA PHE GLY PHE SER ILE SEQRES 31 A 1053 ASN THR LEU THR MET PHE GLY MET VAL LEU ALA ILE GLY SEQRES 32 A 1053 LEU LEU VAL ASP ASP ALA ILE VAL VAL VAL GLU ASN VAL SEQRES 33 A 1053 GLU ARG VAL MET ALA GLU GLU GLY LEU PRO PRO LYS GLU SEQRES 34 A 1053 ALA THR ARG LYS SER MET GLY GLN ILE GLN GLY ALA LEU SEQRES 35 A 1053 VAL GLY ILE ALA MET VAL LEU SER ALA VAL PHE VAL PRO SEQRES 36 A 1053 MET ALA PHE PHE GLY GLY SER THR GLY ALA ILE TYR ARG SEQRES 37 A 1053 GLN PHE SER ILE THR ILE VAL SER ALA MET ALA LEU SER SEQRES 38 A 1053 VAL LEU VAL ALA LEU ILE LEU THR PRO ALA LEU CYS ALA SEQRES 39 A 1053 THR MET LEU LYS PRO ILE ALA LYS GLY ASP HIS GLY GLU SEQRES 40 A 1053 GLY LYS LYS GLY PHE PHE GLY TRP PHE ASN ARG MET PHE SEQRES 41 A 1053 GLU LYS SER THR HIS HIS TYR THR ASP SER VAL GLY GLY SEQRES 42 A 1053 ILE LEU ARG SER THR GLY ARG TYR LEU VAL LEU TYR LEU SEQRES 43 A 1053 ILE ILE VAL VAL GLY MET ALA TYR LEU PHE VAL ARG LEU SEQRES 44 A 1053 PRO SER SER PHE LEU PRO ASP GLU ASP GLN GLY VAL PHE SEQRES 45 A 1053 MET THR MET VAL GLN LEU PRO ALA GLY ALA THR GLN GLU SEQRES 46 A 1053 ARG THR GLN LYS VAL LEU ASN GLU VAL THR HIS TYR TYR SEQRES 47 A 1053 LEU THR LYS GLU LYS ASN ASN VAL GLU SER VAL PHE ALA SEQRES 48 A 1053 VAL ASN GLY PHE GLY PHE ALA GLY ARG GLY GLN ASN THR SEQRES 49 A 1053 GLY ILE ALA PHE VAL SER LEU LYS ASP TRP ALA ASP ARG SEQRES 50 A 1053 PRO GLY GLU GLU ASN LYS VAL GLU ALA ILE THR MET ARG SEQRES 51 A 1053 ALA THR ARG ALA PHE SER GLN ILE LYS ASP ALA MET VAL SEQRES 52 A 1053 PHE ALA PHE ASN LEU PRO ALA ILE VAL GLU LEU GLY THR SEQRES 53 A 1053 ALA THR GLY PHE ASP PHE GLU LEU ILE ASP GLN ALA GLY SEQRES 54 A 1053 LEU GLY HIS GLU LYS LEU THR GLN ALA ARG ASN GLN LEU SEQRES 55 A 1053 LEU ALA GLU ALA ALA LYS HIS PRO ASP MET LEU THR SER SEQRES 56 A 1053 VAL ARG PRO ASN GLY LEU GLU ASP THR PRO GLN PHE LYS SEQRES 57 A 1053 ILE ASP ILE ASP GLN GLU LYS ALA GLN ALA LEU GLY VAL SEQRES 58 A 1053 SER ILE ASN ASP ILE ASN THR THR LEU GLY ALA ALA TRP SEQRES 59 A 1053 GLY GLY SER TYR VAL ASN ASP PHE ILE ASP ARG GLY ARG SEQRES 60 A 1053 VAL LYS LYS VAL TYR VAL MET SER GLU ALA LYS TYR ARG SEQRES 61 A 1053 MET LEU PRO ASP ASP ILE GLY ASP TRP TYR VAL ARG ALA SEQRES 62 A 1053 ALA ASP GLY GLN MET VAL PRO PHE SER ALA PHE SER SER SEQRES 63 A 1053 SER ARG TRP GLU TYR GLY SER PRO ARG LEU GLU ARG TYR SEQRES 64 A 1053 ASN GLY LEU PRO SER MET GLU ILE LEU GLY GLN ALA ALA SEQRES 65 A 1053 PRO GLY LYS SER THR GLY GLU ALA MET GLU LEU MET GLU SEQRES 66 A 1053 GLN LEU ALA SER LYS LEU PRO THR GLY VAL GLY TYR ASP SEQRES 67 A 1053 TRP THR GLY MET SER TYR GLN GLU ARG LEU SER GLY ASN SEQRES 68 A 1053 GLN ALA PRO SER LEU TYR ALA ILE SER LEU ILE VAL VAL SEQRES 69 A 1053 PHE LEU CYS LEU ALA ALA LEU TYR GLU SER TRP SER ILE SEQRES 70 A 1053 PRO PHE SER VAL MET LEU VAL VAL PRO LEU GLY VAL ILE SEQRES 71 A 1053 GLY ALA LEU LEU ALA ALA THR PHE ARG GLY LEU THR ASN SEQRES 72 A 1053 ASP VAL TYR PHE GLN VAL GLY LEU LEU THR THR ILE GLY SEQRES 73 A 1053 LEU SER ALA LYS ASN ALA ILE LEU ILE VAL GLU PHE ALA SEQRES 74 A 1053 LYS ASP LEU MET ASP LYS GLU GLY LYS GLY LEU ILE GLU SEQRES 75 A 1053 ALA THR LEU ASP ALA VAL ARG MET ARG LEU ARG PRO ILE SEQRES 76 A 1053 LEU MET THR SER LEU ALA PHE ILE LEU GLY VAL MET PRO SEQRES 77 A 1053 LEU VAL ILE SER THR GLY ALA GLY SER GLY ALA GLN ASN SEQRES 78 A 1053 ALA VAL GLY THR GLY VAL MET GLY GLY MET VAL THR ALA SEQRES 79 A 1053 THR VAL LEU ALA ILE PHE PHE VAL PRO VAL PHE PHE VAL SEQRES 80 A 1053 VAL VAL ARG ARG ARG PHE SER ARG LYS ASN GLU ASP ILE SEQRES 81 A 1053 GLU HIS SER HIS THR VAL ASP HIS HIS HIS HIS HIS HIS HELIX 1 1 ARG A 8 LEU A 28 1 21 HELIX 2 2 ASP A 53 ASP A 59 1 7 HELIX 3 3 VAL A 61 MET A 69 1 9 HELIX 4 4 ASP A 99 GLN A 108 1 10 HELIX 5 5 ASN A 109 ASN A 109 5 1 HELIX 6 6 LYS A 110 LEU A 118 5 9 HELIX 7 7 GLN A 120 GLN A 124 1 5 HELIX 8 8 GLU A 152 ALA A 159 1 8 HELIX 9 9 MET A 162 SER A 167 1 6 HELIX 10 10 ASN A 189 LYS A 195 1 7 HELIX 11 11 THR A 199 ASN A 211 1 13 HELIX 12 12 SER A 242 LYS A 248 1 7 HELIX 13 13 LEU A 262 VAL A 265 1 4 HELIX 14 14 ALA A 299 LEU A 310 1 12 HELIX 15 15 ALA A 311 LYS A 312 5 2 HELIX 16 16 MET A 313 PHE A 317 5 5 HELIX 17 17 THR A 329 LEU A 357 1 29 HELIX 18 18 ASN A 361 ALA A 385 1 25 HELIX 19 19 ASN A 391 GLU A 423 1 33 HELIX 20 20 PRO A 427 SER A 434 1 8 HELIX 21 21 GLN A 437 PHE A 458 1 22 HELIX 22 22 THR A 463 ALA A 485 1 23 HELIX 23 23 ILE A 487 MET A 496 1 10 HELIX 24 24 PHE A 513 HIS A 525 1 13 HELIX 25 25 HIS A 525 ARG A 536 1 12 HELIX 26 26 THR A 538 ARG A 558 1 21 HELIX 27 27 THR A 583 LYS A 601 1 19 HELIX 28 28 ASP A 633 ARG A 637 5 5 HELIX 29 29 LYS A 643 ILE A 658 1 16 HELIX 30 30 GLY A 691 HIS A 709 1 19 HELIX 31 31 ASP A 732 GLY A 740 1 9 HELIX 32 32 SER A 742 GLY A 755 1 14 HELIX 33 33 GLU A 776 ARG A 780 5 5 HELIX 34 34 LEU A 782 GLY A 787 5 6 HELIX 35 35 SER A 802 PHE A 804 5 3 HELIX 36 36 SER A 836 SER A 849 1 14 HELIX 37 37 GLN A 872 TYR A 892 1 21 HELIX 38 38 SER A 896 VAL A 901 1 6 HELIX 39 39 LEU A 903 ARG A 919 1 17 HELIX 40 40 ASP A 924 GLU A 956 1 33 HELIX 41 41 ILE A 961 MET A 970 1 10 HELIX 42 42 LEU A 972 ILE A 991 1 20 HELIX 43 43 SER A 997 ALA A 1018 1 22 HELIX 44 44 VAL A 1024 PHE A 1033 1 10 SHEET 1 A10 VAL A 127 LYS A 131 0 SHEET 2 A10 ALA A 42 SER A 48 -1 SHEET 3 A10 THR A 87 THR A 93 -1 SHEET 4 A10 TYR A 77 ASP A 83 -1 SHEET 5 A10 ARG A 815 TYR A 819 -1 SHEET 6 A10 LEU A 822 GLN A 830 -1 SHEET 7 A10 SER A 715 PRO A 718 -1 SHEET 8 A10 LEU A 822 GLN A 830 -1 SHEET 9 A10 GLY A 679 ASP A 686 -1 SHEET 10 A10 VAL A 855 ASP A 858 -1 SHEET 1 B10 LEU A 321 VAL A 324 0 SHEET 2 B10 PHE A 136 ASN A 144 -1 SHEET 3 B10 GLN A 284 LYS A 292 -1 SHEET 4 B10 ASP A 174 LEU A 177 -1 SHEET 5 B10 GLN A 284 LYS A 292 -1 SHEET 6 B10 ILE A 278 PHE A 281 -1 SHEET 7 B10 VAL A 606 VAL A 612 -1 SHEET 8 B10 ASN A 623 LEU A 631 -1 SHEET 9 B10 PHE A 572 GLN A 577 -1 SHEET 10 B10 ALA A 661 ASN A 667 -1 SHEET 1 C 6 ALA A 266 GLY A 272 0 SHEET 2 C 6 TYR A 182 MET A 188 -1 SHEET 3 C 6 ARG A 767 VAL A 773 1 SHEET 4 C 6 GLY A 756 TYR A 758 -1 SHEET 5 C 6 ARG A 767 VAL A 773 -1 SHEET 6 C 6 ASN A 760 ASP A 764 -1 SHEET 1 D 3 GLN A 218 GLY A 220 0 SHEET 2 D 3 ASN A 231 LEU A 240 -1 SHEET 3 D 3 ASN A 211 VAL A 214 -1 SHEET 1 E 2 LEU A 250 ASN A 254 0 SHEET 2 E 2 SER A 258 LEU A 261 -1 SHEET 1 F 2 THR A 724 ILE A 729 0 SHEET 2 F 2 SER A 807 GLY A 812 -1 SHEET 1 G 2 TYR A 790 ALA A 793 0 SHEET 2 G 2 GLN A 797 PRO A 800 -1 SHEET 1 H 2 GLY A 614 GLY A 616 0 SHEET 2 H 2 GLY A 619 GLY A 621 -1 CRYST1 144.536 144.536 519.178 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006919 0.003995 0.000000 0.00000 SCALE2 0.000000 0.007989 0.000000 0.00000 SCALE3 0.000000 0.000000 0.001926 0.00000