PDB Short entry for 1J09 HEADER LIGASE 12-NOV-02 1J09 TITLE CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS GLUTAMYL-TRNA SYNTHETASE TITLE 2 COMPLEXED WITH ATP AND GLU COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTAMYL-TRNA SYNTHETASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GLURS, GLUTAMATE--TRNA LIGASE; COMPND 5 EC: 6.1.1.17; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PK7 KEYWDS GLURS-ATP-GLU COMPLEX, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 2 INITIATIVE, RSGI, STRUCTURAL GENOMICS, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR S.SEKINE,O.NUREKI,D.Y.DUBOIS,S.BERNIER,R.CHENEVERT,J.LAPOINTE, AUTHOR 2 D.G.VASSYLYEV,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 3 INITIATIVE (RSGI) REVDAT 3 25-OCT-23 1J09 1 REMARK LINK REVDAT 2 24-FEB-09 1J09 1 VERSN REVDAT 1 25-FEB-03 1J09 0 JRNL AUTH S.SEKINE,O.NUREKI,D.Y.DUBOIS,S.BERNIER,R.CHENEVERT, JRNL AUTH 2 J.LAPOINTE,D.G.VASSYLYEV,S.YOKOYAMA JRNL TITL ATP BINDING BY GLUTAMYL-TRNA SYNTHETASE IS SWITCHED TO THE JRNL TITL 2 PRODUCTIVE MODE BY TRNA BINDING JRNL REF EMBO J. V. 22 676 2003 JRNL REFN ISSN 0261-4189 JRNL PMID 12554668 JRNL DOI 10.1093/EMBOJ/CDG053 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.SEKINE,O.NUREKI,A.SHIMADA,D.G.VASSYLYEV,S.YOKOYAMA REMARK 1 TITL STRUCTURAL BASIS FOR ANTICODON RECOGNITION BY DISCRIMINATING REMARK 1 TITL 2 GLUTAMYL-TRNA SYNTHETASE REMARK 1 REF NAT.STRUCT.BIOL. V. 8 203 2001 REMARK 1 REFN ISSN 1072-8368 REMARK 1 DOI 10.1038/84927 REMARK 1 REFERENCE 2 REMARK 1 AUTH O.NUREKI,D.G.VASSYLYEV,K.KATAYANAGI,T.SHIMIZU,S.SEKINE, REMARK 1 AUTH 2 T.KIGAWA,T.MIYAZAWA,S.YOKOYAMA,K.MORIKAWA REMARK 1 TITL ARCHITECTURES OF CLASS-DEFINING AND SPECIFIC DOMAINS OF REMARK 1 TITL 2 GLUTAMYL-TRNA SYNTHETASE REMARK 1 REF SCIENCE V. 267 1958 1995 REMARK 1 REFN ISSN 0036-8075 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1790268.310 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 91.7 REMARK 3 NUMBER OF REFLECTIONS : 48560 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2431 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.88 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5785 REMARK 3 BIN R VALUE (WORKING SET) : 0.2830 REMARK 3 BIN FREE R VALUE : 0.3110 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 288 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.018 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3814 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 355 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.88000 REMARK 3 B22 (A**2) : 5.64000 REMARK 3 B33 (A**2) : -4.76000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.20 REMARK 3 ESD FROM SIGMAA (A) : 0.20 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.20 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.830 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.200 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.840 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.040 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.030 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 70.48 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ATP.PARAM REMARK 3 PARAMETER FILE 4 : MG.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : LIGAND.TOP REMARK 3 TOPOLOGY FILE 4 : MG.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1J09 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-NOV-02. REMARK 100 THE DEPOSITION ID IS D_1000005467. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-MAY-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : SILICON REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49026 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.44400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB 1GLN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6000, PH 6.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 40.96000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.55500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.31000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 41.55500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.96000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.31000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 376 55.27 -90.44 REMARK 500 PRO A 445 -169.30 -77.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A 501 O1A REMARK 620 2 ATP A 501 O1B 82.7 REMARK 620 3 ATP A 501 O1G 98.7 79.8 REMARK 620 4 HOH A1395 O 84.6 104.9 174.6 REMARK 620 5 HOH A1396 O 170.4 92.8 88.9 88.3 REMARK 620 6 HOH A1397 O 92.3 165.4 87.3 88.3 93.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GLU A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1G59 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS GLURS/TRNA(GLU) BINARY REMARK 900 COMPLEX. REMARK 900 RELATED ID: 1GLN RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS GLURS. REMARK 900 RELATED ID: 1N75 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS GLURS COMPLEXED WITH ATP. REMARK 900 RELATED ID: 1N77 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS GLURS COMPLEXED WITH REMARK 900 TRNA(GLU) AND ATP. REMARK 900 RELATED ID: 1N78 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS GLURS COMPLEXED WITH REMARK 900 TRNA(GLU) AND GLUTAMOL-AMP. REMARK 900 RELATED ID: TTK003000897.2 RELATED DB: TARGETDB DBREF 1J09 A 1 468 UNP P27000 SYE_THET8 1 468 SEQADV 1J09 GLY A 74 UNP P27000 ALA 74 SEE REMARK 999 SEQADV 1J09 GLY A 75 UNP P27000 ALA 75 SEE REMARK 999 SEQADV 1J09 HIS A 77 UNP P27000 THR 77 SEE REMARK 999 SEQRES 1 A 468 MET VAL VAL THR ARG ILE ALA PRO SER PRO THR GLY ASP SEQRES 2 A 468 PRO HIS VAL GLY THR ALA TYR ILE ALA LEU PHE ASN TYR SEQRES 3 A 468 ALA TRP ALA ARG ARG ASN GLY GLY ARG PHE ILE VAL ARG SEQRES 4 A 468 ILE GLU ASP THR ASP ARG ALA ARG TYR VAL PRO GLY ALA SEQRES 5 A 468 GLU GLU ARG ILE LEU ALA ALA LEU LYS TRP LEU GLY LEU SEQRES 6 A 468 SER TYR ASP GLU GLY PRO ASP VAL GLY GLY PRO HIS GLY SEQRES 7 A 468 PRO TYR ARG GLN SER GLU ARG LEU PRO LEU TYR GLN LYS SEQRES 8 A 468 TYR ALA GLU GLU LEU LEU LYS ARG GLY TRP ALA TYR ARG SEQRES 9 A 468 ALA PHE GLU THR PRO GLU GLU LEU GLU GLN ILE ARG LYS SEQRES 10 A 468 GLU LYS GLY GLY TYR ASP GLY ARG ALA ARG ASN ILE PRO SEQRES 11 A 468 PRO GLU GLU ALA GLU GLU ARG ALA ARG ARG GLY GLU PRO SEQRES 12 A 468 HIS VAL ILE ARG LEU LYS VAL PRO ARG PRO GLY THR THR SEQRES 13 A 468 GLU VAL LYS ASP GLU LEU ARG GLY VAL VAL VAL TYR ASP SEQRES 14 A 468 ASN GLN GLU ILE PRO ASP VAL VAL LEU LEU LYS SER ASP SEQRES 15 A 468 GLY TYR PRO THR TYR HIS LEU ALA ASN VAL VAL ASP ASP SEQRES 16 A 468 HIS LEU MET GLY VAL THR ASP VAL ILE ARG ALA GLU GLU SEQRES 17 A 468 TRP LEU VAL SER THR PRO ILE HIS VAL LEU LEU TYR ARG SEQRES 18 A 468 ALA PHE GLY TRP GLU ALA PRO ARG PHE TYR HIS MET PRO SEQRES 19 A 468 LEU LEU ARG ASN PRO ASP LYS THR LYS ILE SER LYS ARG SEQRES 20 A 468 LYS SER HIS THR SER LEU ASP TRP TYR LYS ALA GLU GLY SEQRES 21 A 468 PHE LEU PRO GLU ALA LEU ARG ASN TYR LEU CYS LEU MET SEQRES 22 A 468 GLY PHE SER MET PRO ASP GLY ARG GLU ILE PHE THR LEU SEQRES 23 A 468 GLU GLU PHE ILE GLN ALA PHE THR TRP GLU ARG VAL SER SEQRES 24 A 468 LEU GLY GLY PRO VAL PHE ASP LEU GLU LYS LEU ARG TRP SEQRES 25 A 468 MET ASN GLY LYS TYR ILE ARG GLU VAL LEU SER LEU GLU SEQRES 26 A 468 GLU VAL ALA GLU ARG VAL LYS PRO PHE LEU ARG GLU ALA SEQRES 27 A 468 GLY LEU SER TRP GLU SER GLU ALA TYR LEU ARG ARG ALA SEQRES 28 A 468 VAL GLU LEU MET ARG PRO ARG PHE ASP THR LEU LYS GLU SEQRES 29 A 468 PHE PRO GLU LYS ALA ARG TYR LEU PHE THR GLU ASP TYR SEQRES 30 A 468 PRO VAL SER GLU LYS ALA GLN ARG LYS LEU GLU GLU GLY SEQRES 31 A 468 LEU PRO LEU LEU LYS GLU LEU TYR PRO ARG LEU ARG ALA SEQRES 32 A 468 GLN GLU GLU TRP THR GLU ALA ALA LEU GLU ALA LEU LEU SEQRES 33 A 468 ARG GLY PHE ALA ALA GLU LYS GLY VAL LYS LEU GLY GLN SEQRES 34 A 468 VAL ALA GLN PRO LEU ARG ALA ALA LEU THR GLY SER LEU SEQRES 35 A 468 GLU THR PRO GLY LEU PHE GLU ILE LEU ALA LEU LEU GLY SEQRES 36 A 468 LYS GLU ARG ALA LEU ARG ARG LEU GLU ARG ALA LEU ALA HET MG A 502 1 HET GLU A 500 10 HET ATP A 501 31 HETNAM MG MAGNESIUM ION HETNAM GLU GLUTAMIC ACID HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE FORMUL 2 MG MG 2+ FORMUL 3 GLU C5 H9 N O4 FORMUL 4 ATP C10 H16 N5 O13 P3 FORMUL 5 HOH *355(H2 O) HELIX 1 1 HIS A 15 ASN A 32 1 18 HELIX 2 2 GLY A 51 LEU A 63 1 13 HELIX 3 3 ARG A 81 GLU A 84 5 4 HELIX 4 4 ARG A 85 ARG A 99 1 15 HELIX 5 5 THR A 108 GLY A 120 1 13 HELIX 6 6 GLY A 124 ILE A 129 5 6 HELIX 7 7 PRO A 130 ARG A 140 1 11 HELIX 8 8 GLN A 171 ILE A 173 5 3 HELIX 9 9 THR A 186 MET A 198 1 13 HELIX 10 10 GLU A 208 VAL A 211 5 4 HELIX 11 11 SER A 212 GLY A 224 1 13 HELIX 12 12 SER A 252 GLU A 259 1 8 HELIX 13 13 LEU A 262 GLY A 274 1 13 HELIX 14 14 THR A 285 PHE A 293 1 9 HELIX 15 15 THR A 294 VAL A 298 5 5 HELIX 16 16 ASP A 306 VAL A 321 1 16 HELIX 17 17 SER A 323 ALA A 338 1 16 HELIX 18 18 SER A 344 ARG A 356 1 13 HELIX 19 19 PRO A 357 PHE A 359 5 3 HELIX 20 20 LYS A 363 ALA A 369 1 7 HELIX 21 21 ARG A 370 PHE A 373 5 4 HELIX 22 22 SER A 380 GLN A 404 1 25 HELIX 23 23 THR A 408 GLY A 424 1 17 HELIX 24 24 LYS A 426 GLY A 440 1 15 HELIX 25 25 GLY A 446 LEU A 453 1 8 HELIX 26 26 GLY A 455 ALA A 468 1 14 SHEET 1 A 2 VAL A 3 ILE A 6 0 SHEET 2 A 2 ARG A 35 VAL A 38 1 O ARG A 35 N THR A 4 SHEET 1 B 3 ALA A 102 ALA A 105 0 SHEET 2 B 3 VAL A 145 LEU A 148 -1 O VAL A 145 N ALA A 105 SHEET 3 B 3 VAL A 177 LEU A 179 -1 O LEU A 178 N ILE A 146 SHEET 1 C 2 THR A 155 ASP A 160 0 SHEET 2 C 2 GLY A 164 ASP A 169 -1 O VAL A 166 N VAL A 158 SHEET 1 D 2 ASP A 202 ALA A 206 0 SHEET 2 D 2 ARG A 229 MET A 233 1 O ARG A 229 N VAL A 203 LINK O1A ATP A 501 MG MG A 502 1555 1555 2.02 LINK O1B ATP A 501 MG MG A 502 1555 1555 2.06 LINK O1G ATP A 501 MG MG A 502 1555 1555 2.08 LINK MG MG A 502 O HOH A1395 1555 1555 1.98 LINK MG MG A 502 O HOH A1396 1555 1555 1.99 LINK MG MG A 502 O HOH A1397 1555 1555 1.99 CISPEP 1 GLY A 78 PRO A 79 0 -0.09 CISPEP 2 ARG A 152 PRO A 153 0 -0.22 SITE 1 AC1 4 ATP A 501 HOH A1395 HOH A1396 HOH A1397 SITE 1 AC2 12 ARG A 5 ALA A 7 SER A 9 GLU A 41 SITE 2 AC2 12 TYR A 187 ASN A 191 ARG A 205 TRP A 209 SITE 3 AC2 12 ATP A 501 HOH A1021 HOH A1028 HOH A1138 SITE 1 AC3 22 HIS A 15 GLU A 208 TRP A 209 LEU A 235 SITE 2 AC3 22 LEU A 236 LYS A 243 ILE A 244 SER A 245 SITE 3 AC3 22 LYS A 246 ARG A 247 GLU A 500 MG A 502 SITE 4 AC3 22 HOH A1037 HOH A1072 HOH A1085 HOH A1147 SITE 5 AC3 22 HOH A1185 HOH A1270 HOH A1359 HOH A1395 SITE 6 AC3 22 HOH A1396 HOH A1397 CRYST1 81.920 82.620 83.110 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012207 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012104 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012032 0.00000