PDB Short entry for 1JBP HEADER TRANSFERASE 06-JUN-01 1JBP TITLE CRYSTAL STRUCTURE OF THE CATALYTIC SUBUNIT OF CAMP-DEPENDENT PROTEIN TITLE 2 KINASE COMPLEXED WITH A SUBSTRATE PEPTIDE, ADP AND DETERGENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE, ALPHA-CATALYTIC SUBUNIT; COMPND 3 CHAIN: E; COMPND 4 SYNONYM: PKA C-ALPHA; COMPND 5 EC: 2.7.1.37; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE INHIBITOR, MUSCLE/BRAIN FORM; COMPND 9 CHAIN: S; COMPND 10 FRAGMENT: RESIDUES 5-24; COMPND 11 SYNONYM: PKI-ALPHA; COMPND 12 ENGINEERED: YES; COMPND 13 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED. THE SEQUENCE SOURCE 10 OF THE PEPTIDE IS NATURALLY FOUND IN MUS MUSCULUS (MOUSE). KEYWDS PROTEIN-SUBSTRATE COMPLEX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR MADHUSUDAN,E.A.TRAFNY,N.H.XUONG,J.A.ADAMS,L.F.TEN EYCK,S.S.TAYLOR, AUTHOR 2 J.M.SOWADSKI REVDAT 6 16-AUG-23 1JBP 1 REMARK REVDAT 5 27-OCT-21 1JBP 1 REMARK SEQADV LINK REVDAT 4 04-OCT-17 1JBP 1 REMARK REVDAT 3 24-FEB-09 1JBP 1 VERSN REVDAT 2 01-APR-03 1JBP 1 JRNL REVDAT 1 27-JUN-01 1JBP 0 JRNL AUTH MADHUSUDAN,E.A.TRAFNY,N.H.XUONG,J.A.ADAMS,L.F.TEN EYCK, JRNL AUTH 2 S.S.TAYLOR,J.M.SOWADSKI JRNL TITL CAMP-DEPENDENT PROTEIN KINASE: CRYSTALLOGRAPHIC INSIGHTS JRNL TITL 2 INTO SUBSTRATE RECOGNITION AND PHOSPHOTRANSFER. JRNL REF PROTEIN SCI. V. 3 176 1994 JRNL REFN ISSN 0961-8368 JRNL PMID 8003955 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.R.KNIGHTON,S.M.BELL,J.ZHENG,L.F.TEN EYCK,N.XUONG, REMARK 1 AUTH 2 S.S.TAYLOR,J.M.SOWADSKI REMARK 1 TITL 2.0 A REFINED CRYSTAL STRUCTURE OF THE CATALYTIC SUBUNIT OF REMARK 1 TITL 2 CAMP-DEPENDENT PROTEIN KINASE COMPLEXED WITH A PEPTIDE REMARK 1 TITL 3 INHIBITOR AND DETERGENT REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 49 357 1993 REMARK 1 REFN ISSN 0907-4449 REMARK 1 DOI 10.1107/S0907444993000502 REMARK 1 REFERENCE 2 REMARK 1 AUTH J.ZHENG,E.A.TRAFNY,D.R.KNIGHTON,N.XUONG,S.S.TAYLOR, REMARK 1 AUTH 2 L.F.TEN EYCK,J.M.SOWADSKI REMARK 1 TITL 2.2 A REFINED CRYSTAL STRUCTURE OF THE CATALYTIC SUBUNIT OF REMARK 1 TITL 2 CAMP-DEPENDENT PROTEIN KINASE COMPLEXED WITH MNATP AND A REMARK 1 TITL 3 PEPTIDE INHIBITOR REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 49 362 1993 REMARK 1 REFN ISSN 0907-4449 REMARK 1 DOI 10.1107/S0907444993000423 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 21349 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2866 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 168 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.019 ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : 2.463 ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JBP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JUN-01. REMARK 100 THE DEPOSITION ID IS D_1000013594. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-92 REMARK 200 TEMPERATURE (KELVIN) : 277 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : XUONG-HAMLIN MULTIWIRE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : UCSD-SYSTEM REMARK 200 DATA SCALING SOFTWARE : UCSD-SYSTEM REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21349 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: PDB ENTRY 1ATP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION,HANGING DROP,PH REMARK 280 8.0,277K, 10MM DITHIOTHREITOL, 8% DOW POLYETHYLENE GLYCOL 400, REMARK 280 METHANOL, BICINE, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.98000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.50000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.05500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.50000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.98000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.05500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, S REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY E 1 REMARK 465 ASN E 2 REMARK 465 ALA E 3 REMARK 465 ALA E 4 REMARK 465 ALA E 5 REMARK 465 ALA E 6 REMARK 465 LYS E 7 REMARK 465 LYS E 8 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU E 11 CG CD OE1 OE2 REMARK 470 SER E 14 OG REMARK 470 LYS E 16 CG CD CE NZ REMARK 470 GLU E 17 CG CD OE1 OE2 REMARK 470 LYS E 21 CG CD CE NZ REMARK 470 GLU E 24 CG CD OE1 OE2 REMARK 470 LYS E 28 CG CD CE NZ REMARK 470 GLU E 31 CG CD OE1 OE2 REMARK 470 ARG E 45 CG CD NE CZ NH1 NH2 REMARK 470 SER E 53 OG REMARK 470 GLU E 64 CG CD OE1 OE2 REMARK 470 LYS E 83 CG CD CE NZ REMARK 470 GLU E 242 CG CD OE1 OE2 REMARK 470 ARG E 256 CG CD NE CZ NH1 NH2 REMARK 470 ARG E 270 CG CD NE CZ NH1 NH2 REMARK 470 ASP E 276 CG OD1 OD2 REMARK 470 LYS E 279 CG CD CE NZ REMARK 470 GLU E 311 CG CD OE1 OE2 REMARK 470 LYS E 317 CG CD CE NZ REMARK 470 PHE E 318 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS E 319 CG CD CE NZ REMARK 470 GLU E 331 CG CD OE1 OE2 REMARK 470 GLU E 333 CG CD OE1 OE2 REMARK 470 GLU E 334 CG CD OE1 OE2 REMARK 470 ARG E 336 CG CD NE CZ NH1 NH2 REMARK 470 ILE E 339 CG1 CG2 CD1 REMARK 470 ASN E 340 CG OD1 ND2 REMARK 470 LYS E 345 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU E 13 CD GLU E 13 OE2 0.083 REMARK 500 GLU E 91 CD GLU E 91 OE2 0.069 REMARK 500 GLU E 121 CD GLU E 121 OE2 0.095 REMARK 500 GLU E 170 CD GLU E 170 OE2 0.073 REMARK 500 GLU E 248 CD GLU E 248 OE2 0.071 REMARK 500 GLU E 349 CD GLU E 349 OE2 0.068 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLN E 12 N - CA - C ANGL. DEV. = -18.6 DEGREES REMARK 500 ASP E 25 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP E 25 CB - CG - OD2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ASP E 112 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG E 133 NE - CZ - NH1 ANGL. DEV. = 5.1 DEGREES REMARK 500 ARG E 133 NE - CZ - NH2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ILE E 163 CB - CA - C ANGL. DEV. = -12.2 DEGREES REMARK 500 ARG E 165 C - N - CA ANGL. DEV. = -19.7 DEGREES REMARK 500 ASP E 175 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP E 175 CB - CG - OD2 ANGL. DEV. = -6.8 DEGREES REMARK 500 ASP E 241 CB - CG - OD2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ASP E 267 CB - CG - OD1 ANGL. DEV. = 7.2 DEGREES REMARK 500 ASP E 267 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 ASP E 290 CB - CG - OD2 ANGL. DEV. = -6.6 DEGREES REMARK 500 ASP E 301 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP E 323 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP E 323 CB - CG - OD2 ANGL. DEV. = -6.7 DEGREES REMARK 500 TYR S 363 CB - CG - CD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 TYR S 363 CB - CG - CD1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ASP S 365 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP S 380 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN E 12 -157.09 -69.98 REMARK 500 GLU E 13 -55.44 62.86 REMARK 500 ASN E 36 57.04 35.62 REMARK 500 ILE E 46 -66.00 -98.36 REMARK 500 SER E 53 -72.12 -26.52 REMARK 500 PHE E 54 25.02 -143.81 REMARK 500 ASN E 99 106.81 -165.99 REMARK 500 ASP E 166 45.86 -143.68 REMARK 500 LYS E 168 145.44 179.01 REMARK 500 ASP E 184 83.81 60.97 REMARK 500 ASN E 216 -157.31 -131.41 REMARK 500 LEU E 273 35.37 -80.60 REMARK 500 ILE E 339 51.84 -104.55 REMARK 500 ASN E 340 124.38 -178.70 REMARK 500 LYS E 342 -72.48 -64.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP E 381 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OCT E 382 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1APM RELATED DB: PDB REMARK 900 1APM CONTAINS THE SAME PROTEIN COMPLEXED WITH PEPTIDE INHIBITOR AND REMARK 900 DETERGENT REMARK 900 RELATED ID: 1ATP RELATED DB: PDB REMARK 900 1ATP CONTAINS THE SAME PROTEIN COMPLEXED WITH MNATP AND PEPTIDE REMARK 900 INHIBITOR DBREF 1JBP E 1 350 UNP P05132 KAPCA_MOUSE 1 350 DBREF 1JBP S 361 380 UNP P27776 IPKA_MOUSE 5 24 SEQADV 1JBP SEP E 10 UNP P05132 SER 10 MODIFIED RESIDUE SEQADV 1JBP TPO E 197 UNP P05132 THR 197 MODIFIED RESIDUE SEQADV 1JBP GLU E 242 UNP P05132 GLN 242 CONFLICT SEQADV 1JBP SEP E 338 UNP P05132 SER 338 MODIFIED RESIDUE SEQADV 1JBP ALA S 376 UNP P27776 ASN 20 ENGINEERED MUTATION SEQADV 1JBP SER S 377 UNP P27776 ALA 21 ENGINEERED MUTATION SEQRES 1 E 350 GLY ASN ALA ALA ALA ALA LYS LYS GLY SEP GLU GLN GLU SEQRES 2 E 350 SER VAL LYS GLU PHE LEU ALA LYS ALA LYS GLU ASP PHE SEQRES 3 E 350 LEU LYS LYS TRP GLU THR PRO SER GLN ASN THR ALA GLN SEQRES 4 E 350 LEU ASP GLN PHE ASP ARG ILE LYS THR LEU GLY THR GLY SEQRES 5 E 350 SER PHE GLY ARG VAL MET LEU VAL LYS HIS LYS GLU SER SEQRES 6 E 350 GLY ASN HIS TYR ALA MET LYS ILE LEU ASP LYS GLN LYS SEQRES 7 E 350 VAL VAL LYS LEU LYS GLN ILE GLU HIS THR LEU ASN GLU SEQRES 8 E 350 LYS ARG ILE LEU GLN ALA VAL ASN PHE PRO PHE LEU VAL SEQRES 9 E 350 LYS LEU GLU PHE SER PHE LYS ASP ASN SER ASN LEU TYR SEQRES 10 E 350 MET VAL MET GLU TYR VAL ALA GLY GLY GLU MET PHE SER SEQRES 11 E 350 HIS LEU ARG ARG ILE GLY ARG PHE SER GLU PRO HIS ALA SEQRES 12 E 350 ARG PHE TYR ALA ALA GLN ILE VAL LEU THR PHE GLU TYR SEQRES 13 E 350 LEU HIS SER LEU ASP LEU ILE TYR ARG ASP LEU LYS PRO SEQRES 14 E 350 GLU ASN LEU LEU ILE ASP GLN GLN GLY TYR ILE GLN VAL SEQRES 15 E 350 THR ASP PHE GLY PHE ALA LYS ARG VAL LYS GLY ARG THR SEQRES 16 E 350 TRP TPO LEU CYS GLY THR PRO GLU TYR LEU ALA PRO GLU SEQRES 17 E 350 ILE ILE LEU SER LYS GLY TYR ASN LYS ALA VAL ASP TRP SEQRES 18 E 350 TRP ALA LEU GLY VAL LEU ILE TYR GLU MET ALA ALA GLY SEQRES 19 E 350 TYR PRO PRO PHE PHE ALA ASP GLU PRO ILE GLN ILE TYR SEQRES 20 E 350 GLU LYS ILE VAL SER GLY LYS VAL ARG PHE PRO SER HIS SEQRES 21 E 350 PHE SER SER ASP LEU LYS ASP LEU LEU ARG ASN LEU LEU SEQRES 22 E 350 GLN VAL ASP LEU THR LYS ARG PHE GLY ASN LEU LYS ASN SEQRES 23 E 350 GLY VAL ASN ASP ILE LYS ASN HIS LYS TRP PHE ALA THR SEQRES 24 E 350 THR ASP TRP ILE ALA ILE TYR GLN ARG LYS VAL GLU ALA SEQRES 25 E 350 PRO PHE ILE PRO LYS PHE LYS GLY PRO GLY ASP THR SER SEQRES 26 E 350 ASN PHE ASP ASP TYR GLU GLU GLU GLU ILE ARG VAL SEP SEQRES 27 E 350 ILE ASN GLU LYS CYS GLY LYS GLU PHE THR GLU PHE SEQRES 1 S 20 THR THR TYR ALA ASP PHE ILE ALA SER GLY ARG THR GLY SEQRES 2 S 20 ARG ARG ALA SER ILE HIS ASP MODRES 1JBP SEP E 10 SER PHOSPHOSERINE MODRES 1JBP TPO E 197 THR PHOSPHOTHREONINE MODRES 1JBP SEP E 338 SER PHOSPHOSERINE HET SEP E 10 10 HET TPO E 197 11 HET SEP E 338 10 HET ADP E 381 27 HET OCT E 382 8 HETNAM SEP PHOSPHOSERINE HETNAM TPO PHOSPHOTHREONINE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM OCT N-OCTANE HETSYN SEP PHOSPHONOSERINE HETSYN TPO PHOSPHONOTHREONINE FORMUL 1 SEP 2(C3 H8 N O6 P) FORMUL 1 TPO C4 H10 N O6 P FORMUL 3 ADP C10 H15 N5 O10 P2 FORMUL 4 OCT C8 H18 FORMUL 5 HOH *168(H2 O) HELIX 1 1 GLU E 13 THR E 32 1 20 HELIX 2 2 GLN E 39 ASP E 41 5 3 HELIX 3 3 LYS E 76 LEU E 82 1 7 HELIX 4 4 GLN E 84 VAL E 98 1 15 HELIX 5 5 GLU E 127 GLY E 136 1 10 HELIX 6 6 SER E 139 LEU E 160 1 22 HELIX 7 7 LYS E 168 GLU E 170 5 3 HELIX 8 8 THR E 201 LEU E 205 5 5 HELIX 9 9 ALA E 206 LEU E 211 1 6 HELIX 10 10 LYS E 217 GLY E 234 1 18 HELIX 11 11 GLU E 242 GLY E 253 1 12 HELIX 12 12 SER E 262 LEU E 273 1 12 HELIX 13 13 VAL E 288 ASN E 293 1 6 HELIX 14 14 LYS E 295 THR E 300 5 6 HELIX 15 15 ASP E 301 GLN E 307 1 7 HELIX 16 16 THR S 361 ALA S 368 1 8 SHEET 1 A 5 PHE E 43 THR E 51 0 SHEET 2 A 5 GLY E 55 HIS E 62 -1 O VAL E 57 N LEU E 49 SHEET 3 A 5 HIS E 68 ASP E 75 -1 O TYR E 69 N VAL E 60 SHEET 4 A 5 ASN E 115 GLU E 121 -1 O LEU E 116 N LEU E 74 SHEET 5 A 5 LEU E 106 LYS E 111 -1 N GLU E 107 O VAL E 119 SHEET 1 B 2 LEU E 162 ILE E 163 0 SHEET 2 B 2 LYS E 189 ARG E 190 -1 O LYS E 189 N ILE E 163 SHEET 1 C 2 LEU E 172 ILE E 174 0 SHEET 2 C 2 ILE E 180 VAL E 182 -1 O GLN E 181 N LEU E 173 SHEET 1 D 2 CYS E 199 GLY E 200 0 SHEET 2 D 2 ILE S 378 HIS S 379 -1 N ILE S 378 O GLY E 200 LINK C GLY E 9 N SEP E 10 1555 1555 1.33 LINK C SEP E 10 N GLU E 11 1555 1555 1.35 LINK C TRP E 196 N TPO E 197 1555 1555 1.33 LINK C TPO E 197 N LEU E 198 1555 1555 1.32 LINK C VAL E 337 N SEP E 338 1555 1555 1.32 LINK C SEP E 338 N ILE E 339 1555 1555 1.31 SITE 1 AC1 20 LEU E 49 THR E 51 GLY E 52 SER E 53 SITE 2 AC1 20 GLY E 55 VAL E 57 ALA E 70 LYS E 72 SITE 3 AC1 20 VAL E 104 GLU E 121 VAL E 123 GLU E 127 SITE 4 AC1 20 GLU E 170 ASN E 171 LEU E 173 THR E 183 SITE 5 AC1 20 ASP E 184 PHE E 327 HOH E 487 ARG S 374 SITE 1 AC2 1 GLU E 155 CRYST1 73.960 76.110 81.000 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013521 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013139 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012346 0.00000