PDB Short entry for 1JG3 HEADER TRANSFERASE 22-JUN-01 1JG3 TITLE CRYSTAL STRUCTURE OF L-ISOASPARTYL (D-ASPARTYL) O-METHYLTRANSFERASE TITLE 2 WITH ADENOSINE & VYP(ISP)HA SUBSTRATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PROTEIN-BETA-ASPARTATE METHYLTRANSFERASE; PIMT; PROTEIN L- COMPND 5 ISOASPARTYL METHYLTRANSFERASE; L-ISOASPARTYL PROTEIN CARBOXYL COMPND 6 METHYLTRANSFERASE; COMPND 7 EC: 2.1.1.77; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: VYP(L-ISO-ASP)HA; COMPND 11 CHAIN: C, D; COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: HEXAPEPTIDE SUBSTRATE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 3 ORGANISM_TAXID: 2261; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 SYNTHETIC: YES KEYWDS ROSSMANN METHYLTRANSFERASE, PROTEIN REPAIR ISOMERIZATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.C.GRIFFITH,M.R.SAWAYA,D.BOUTZ,N.THAPAR,J.KATZ,S.CLARKE,T.O.YEATES REVDAT 6 27-JUL-11 1JG3 1 HETNAM HETSYN REMARK REVDAT 5 13-JUL-11 1JG3 1 VERSN REVDAT 4 29-DEC-09 1JG3 1 HET REVDAT 3 24-FEB-09 1JG3 1 VERSN REVDAT 2 01-APR-03 1JG3 1 JRNL REVDAT 1 16-NOV-01 1JG3 0 JRNL AUTH S.C.GRIFFITH,M.R.SAWAYA,D.R.BOUTZ,N.THAPAR,J.E.KATZ, JRNL AUTH 2 S.CLARKE,T.O.YEATES JRNL TITL CRYSTAL STRUCTURE OF A PROTEIN REPAIR METHYLTRANSFERASE FROM JRNL TITL 2 PYROCOCCUS FURIOSUS WITH ITS L-ISOASPARTYL PEPTIDE JRNL TITL 3 SUBSTRATE. JRNL REF J.MOL.BIOL. V. 313 1103 2001 JRNL REFN ISSN 0022-2836 JRNL PMID 11700066 JRNL DOI 10.1006/JMBI.2001.5095 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 500.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 39722 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1986 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3494 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.30 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JG3 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JUN-01. REMARK 100 THE RCSB ID CODE IS RCSB013728. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-01 REMARK 200 TEMPERATURE (KELVIN) : 118 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-D REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39722 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 500.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : 0.10600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.43500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50% MPD, 100MM TRIS-HCL, 200MM REMARK 280 AMMONIUM PHOSPHATE, PH 8.5, VAPOR DIFFUSION, HANGING DROP AT 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.51567 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 83.03133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 62.27350 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 103.78917 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 20.75783 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 LEU A 3 REMARK 465 TYR A 4 REMARK 465 SER A 5 REMARK 465 SER A 6 REMARK 465 ASP A 7 REMARK 465 PHE A 8 REMARK 465 PRO A 9 REMARK 465 LEU A 10 REMARK 465 MET A 11 REMARK 465 MET A 12 REMARK 465 ASP A 13 REMARK 465 GLU A 229 REMARK 465 HIS A 230 REMARK 465 HIS A 231 REMARK 465 HIS A 232 REMARK 465 HIS A 233 REMARK 465 HIS A 234 REMARK 465 HIS A 235 REMARK 465 MET B 1 REMARK 465 HIS B 2 REMARK 465 LEU B 3 REMARK 465 TYR B 4 REMARK 465 SER B 5 REMARK 465 SER B 6 REMARK 465 ASP B 7 REMARK 465 PHE B 8 REMARK 465 PRO B 9 REMARK 465 LEU B 10 REMARK 465 MET B 11 REMARK 465 MET B 12 REMARK 465 ASP B 13 REMARK 465 GLU B 229 REMARK 465 HIS B 230 REMARK 465 HIS B 231 REMARK 465 HIS B 232 REMARK 465 HIS B 233 REMARK 465 HIS B 234 REMARK 465 HIS B 235 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 26 CG CD OE1 OE2 REMARK 480 GLU A 135 CG CD OE1 OE2 REMARK 480 LYS A 170 CG CD CE NZ REMARK 480 GLU A 177 CG CD OE1 OE2 REMARK 480 LYS A 205 CG CD CE NZ REMARK 480 ASP A 206 CG OD1 OD2 REMARK 480 LYS A 211 CE NZ REMARK 480 GLU B 31 CG CD OE1 OE2 REMARK 480 LYS B 37 CG CD CE NZ REMARK 480 GLU B 128 CG CD OE1 OE2 REMARK 480 LYS B 170 CD CE NZ REMARK 480 GLU B 173 CG CD OE1 OE2 REMARK 480 GLU B 177 CG CD OE1 OE2 REMARK 480 LYS B 205 CB CG CD CE NZ REMARK 480 LYS B 209 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 51 CB SER A 51 OG 0.095 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 153 81.76 -158.33 REMARK 500 PRO B 69 161.98 -49.76 REMARK 500 PHE B 153 78.02 -159.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1225 DISTANCE = 5.02 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 401 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 73 O REMARK 620 2 HOH B1309 O 89.1 REMARK 620 3 HOH B1336 O 100.7 118.7 REMARK 620 4 THR B 73 OG1 72.1 90.5 150.2 REMARK 620 5 IAS D 4 OXT 119.3 147.7 73.6 84.8 REMARK 620 6 ADN B 550 O5' 79.5 64.9 58.1 142.7 131.1 REMARK 620 7 IAS D 4 O 141.3 103.4 104.7 71.3 44.9 139.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 73 O REMARK 620 2 HOH A1307 O 83.0 REMARK 620 3 HOH A1185 O 92.2 121.3 REMARK 620 4 THR A 73 OG1 69.6 89.7 142.5 REMARK 620 5 IAS C 4 OXT 117.3 154.1 76.3 83.4 REMARK 620 6 IAS C 4 O 140.8 108.4 111.1 73.1 45.8 REMARK 620 7 ADN A 500 O5' 74.0 70.2 52.5 140.2 128.5 145.1 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADN A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADN B 550 DBREF 1JG3 A 11 229 UNP Q8TZR3 PIMT_PYRFU 1 219 DBREF 1JG3 B 11 229 UNP Q8TZR3 PIMT_PYRFU 1 219 DBREF 1JG3 C 1 6 PDB 1JG3 1JG3 1 6 DBREF 1JG3 D 1 6 PDB 1JG3 1JG3 1 6 SEQRES 1 A 235 MET HIS LEU TYR SER SER ASP PHE PRO LEU MET MET ASP SEQRES 2 A 235 GLU LYS GLU LEU TYR GLU LYS TRP MET ARG THR VAL GLU SEQRES 3 A 235 MET LEU LYS ALA GLU GLY ILE ILE ARG SER LYS GLU VAL SEQRES 4 A 235 GLU ARG ALA PHE LEU LYS TYR PRO ARG TYR LEU SER VAL SEQRES 5 A 235 GLU ASP LYS TYR LYS LYS TYR ALA HIS ILE ASP GLU PRO SEQRES 6 A 235 LEU PRO ILE PRO ALA GLY GLN THR VAL SER ALA PRO HIS SEQRES 7 A 235 MET VAL ALA ILE MET LEU GLU ILE ALA ASN LEU LYS PRO SEQRES 8 A 235 GLY MET ASN ILE LEU GLU VAL GLY THR GLY SER GLY TRP SEQRES 9 A 235 ASN ALA ALA LEU ILE SER GLU ILE VAL LYS THR ASP VAL SEQRES 10 A 235 TYR THR ILE GLU ARG ILE PRO GLU LEU VAL GLU PHE ALA SEQRES 11 A 235 LYS ARG ASN LEU GLU ARG ALA GLY VAL LYS ASN VAL HIS SEQRES 12 A 235 VAL ILE LEU GLY ASP GLY SER LYS GLY PHE PRO PRO LYS SEQRES 13 A 235 ALA PRO TYR ASP VAL ILE ILE VAL THR ALA GLY ALA PRO SEQRES 14 A 235 LYS ILE PRO GLU PRO LEU ILE GLU GLN LEU LYS ILE GLY SEQRES 15 A 235 GLY LYS LEU ILE ILE PRO VAL GLY SER TYR HIS LEU TRP SEQRES 16 A 235 GLN GLU LEU LEU GLU VAL ARG LYS THR LYS ASP GLY ILE SEQRES 17 A 235 LYS ILE LYS ASN HIS GLY GLY VAL ALA PHE VAL PRO LEU SEQRES 18 A 235 ILE GLY GLU TYR GLY TRP LYS GLU HIS HIS HIS HIS HIS SEQRES 19 A 235 HIS SEQRES 1 B 235 MET HIS LEU TYR SER SER ASP PHE PRO LEU MET MET ASP SEQRES 2 B 235 GLU LYS GLU LEU TYR GLU LYS TRP MET ARG THR VAL GLU SEQRES 3 B 235 MET LEU LYS ALA GLU GLY ILE ILE ARG SER LYS GLU VAL SEQRES 4 B 235 GLU ARG ALA PHE LEU LYS TYR PRO ARG TYR LEU SER VAL SEQRES 5 B 235 GLU ASP LYS TYR LYS LYS TYR ALA HIS ILE ASP GLU PRO SEQRES 6 B 235 LEU PRO ILE PRO ALA GLY GLN THR VAL SER ALA PRO HIS SEQRES 7 B 235 MET VAL ALA ILE MET LEU GLU ILE ALA ASN LEU LYS PRO SEQRES 8 B 235 GLY MET ASN ILE LEU GLU VAL GLY THR GLY SER GLY TRP SEQRES 9 B 235 ASN ALA ALA LEU ILE SER GLU ILE VAL LYS THR ASP VAL SEQRES 10 B 235 TYR THR ILE GLU ARG ILE PRO GLU LEU VAL GLU PHE ALA SEQRES 11 B 235 LYS ARG ASN LEU GLU ARG ALA GLY VAL LYS ASN VAL HIS SEQRES 12 B 235 VAL ILE LEU GLY ASP GLY SER LYS GLY PHE PRO PRO LYS SEQRES 13 B 235 ALA PRO TYR ASP VAL ILE ILE VAL THR ALA GLY ALA PRO SEQRES 14 B 235 LYS ILE PRO GLU PRO LEU ILE GLU GLN LEU LYS ILE GLY SEQRES 15 B 235 GLY LYS LEU ILE ILE PRO VAL GLY SER TYR HIS LEU TRP SEQRES 16 B 235 GLN GLU LEU LEU GLU VAL ARG LYS THR LYS ASP GLY ILE SEQRES 17 B 235 LYS ILE LYS ASN HIS GLY GLY VAL ALA PHE VAL PRO LEU SEQRES 18 B 235 ILE GLY GLU TYR GLY TRP LYS GLU HIS HIS HIS HIS HIS SEQRES 19 B 235 HIS SEQRES 1 C 6 VAL TYR PRO IAS HIS ALA SEQRES 1 D 6 VAL TYR PRO IAS HIS ALA HET IAS C 4 8 HET IAS D 4 8 HET CL A 300 1 HET NA A 402 1 HET ADN A 500 19 HET CL B 301 1 HET NA B 401 1 HET ADN B 550 19 HETNAM IAS BETA-L-ASPARTIC ACID HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETNAM ADN ADENOSINE HETSYN IAS L-ASPARTIC ACID FORMUL 3 IAS 2(C4 H7 N O4) FORMUL 5 CL 2(CL 1-) FORMUL 6 NA 2(NA 1+) FORMUL 7 ADN 2(C10 H13 N5 O4) FORMUL 11 HOH *210(H2 O) HELIX 1 1 GLU A 14 GLU A 31 1 18 HELIX 2 2 SER A 36 TYR A 46 1 11 HELIX 3 3 PRO A 47 VAL A 52 5 6 HELIX 4 4 GLU A 53 ALA A 60 5 8 HELIX 5 5 PRO A 69 GLY A 71 5 3 HELIX 6 6 ALA A 76 ASN A 88 1 13 HELIX 7 7 GLY A 103 LYS A 114 1 12 HELIX 8 8 ILE A 123 ALA A 137 1 15 HELIX 9 9 ASP A 148 GLY A 152 5 5 HELIX 10 10 PHE A 153 ALA A 157 5 5 HELIX 11 11 PRO A 172 GLN A 178 1 7 HELIX 12 12 GLU B 14 GLU B 31 1 18 HELIX 13 13 SER B 36 TYR B 46 1 11 HELIX 14 14 PRO B 47 VAL B 52 5 6 HELIX 15 15 GLU B 53 ALA B 60 5 8 HELIX 16 16 ALA B 76 ASN B 88 1 13 HELIX 17 17 GLY B 103 LYS B 114 1 12 HELIX 18 18 ILE B 123 ALA B 137 1 15 HELIX 19 19 ASP B 148 GLY B 152 5 5 HELIX 20 20 PHE B 153 ALA B 157 5 5 HELIX 21 21 PRO B 172 GLN B 178 1 7 SHEET 1 A 2 LEU A 66 ILE A 68 0 SHEET 2 A 2 GLN A 72 VAL A 74 -1 O VAL A 74 N LEU A 66 SHEET 1 B 7 VAL A 142 LEU A 146 0 SHEET 2 B 7 VAL A 117 GLU A 121 1 N GLU A 121 O ILE A 145 SHEET 3 B 7 ILE A 95 VAL A 98 1 N GLU A 97 O TYR A 118 SHEET 4 B 7 TYR A 159 VAL A 164 1 O ILE A 163 N VAL A 98 SHEET 5 B 7 LEU A 179 VAL A 189 1 O ILE A 186 N ILE A 162 SHEET 6 B 7 GLN A 196 LYS A 203 -1 O VAL A 201 N LEU A 185 SHEET 7 B 7 ILE A 208 VAL A 216 -1 O LYS A 209 N ARG A 202 SHEET 1 C 2 LEU B 66 ILE B 68 0 SHEET 2 C 2 GLN B 72 VAL B 74 -1 O VAL B 74 N LEU B 66 SHEET 1 D 7 VAL B 142 LEU B 146 0 SHEET 2 D 7 VAL B 117 GLU B 121 1 N VAL B 117 O HIS B 143 SHEET 3 D 7 ILE B 95 VAL B 98 1 N GLU B 97 O TYR B 118 SHEET 4 D 7 TYR B 159 VAL B 164 1 O ILE B 163 N VAL B 98 SHEET 5 D 7 LEU B 179 VAL B 189 1 O ILE B 186 N ILE B 162 SHEET 6 D 7 GLN B 196 THR B 204 -1 O VAL B 201 N LEU B 185 SHEET 7 D 7 GLY B 207 VAL B 216 -1 O LYS B 209 N ARG B 202 LINK O THR B 73 NA NA B 401 1555 1555 2.41 LINK NA NA B 401 O HOH B1309 1555 1555 2.53 LINK O THR A 73 NA NA A 402 1555 1555 2.57 LINK NA NA B 401 O HOH B1336 1555 1555 2.59 LINK NA NA A 402 O HOH A1307 1555 1555 2.60 LINK NA NA A 402 O HOH A1185 1555 1555 2.60 LINK OG1 THR B 73 NA NA B 401 1555 1555 2.78 LINK OG1 THR A 73 NA NA A 402 1555 1555 2.84 LINK C PRO C 3 N IAS C 4 1555 1555 1.46 LINK C PRO D 3 N IAS D 4 1555 1555 1.46 LINK CG IAS C 4 N HIS C 5 1555 1555 1.46 LINK CG IAS D 4 N HIS D 5 1555 1555 1.46 LINK OXT IAS C 4 NA NA A 402 1555 1555 2.37 LINK OXT IAS D 4 NA NA B 401 1555 1555 2.38 LINK NA NA B 401 O5' ADN B 550 1555 1555 3.00 LINK O IAS C 4 NA NA A 402 1555 1555 3.12 LINK NA NA A 402 O5' ADN A 500 1555 1555 3.13 LINK O IAS D 4 NA NA B 401 1555 1555 3.18 CISPEP 1 ALA A 157 PRO A 158 0 -0.03 CISPEP 2 ALA B 157 PRO B 158 0 0.06 SITE 1 AC1 3 LEU A 146 LEU A 194 HOH A1058 SITE 1 AC2 2 LEU B 146 LEU B 194 SITE 1 AC3 4 THR B 73 ADN B 550 HOH B1309 HOH B1336 SITE 1 AC4 4 THR A 73 ADN A 500 HOH A1185 HOH A1307 SITE 1 AC5 19 GLN A 72 THR A 73 GLY A 99 GLY A 101 SITE 2 AC5 19 ILE A 120 GLU A 121 ARG A 122 ILE A 123 SITE 3 AC5 19 LEU A 126 GLY A 147 ASP A 148 GLY A 149 SITE 4 AC5 19 SER A 150 THR A 165 LEU A 221 ILE A 222 SITE 5 AC5 19 NA A 402 HOH A1042 HOH A1185 SITE 1 AC6 20 GLN B 72 THR B 73 GLY B 99 GLY B 101 SITE 2 AC6 20 ILE B 120 GLU B 121 ARG B 122 ILE B 123 SITE 3 AC6 20 LEU B 126 GLY B 147 ASP B 148 GLY B 149 SITE 4 AC6 20 SER B 150 THR B 165 LEU B 221 ILE B 222 SITE 5 AC6 20 NA B 401 HOH B1082 HOH B1309 HOH B1336 CRYST1 91.573 91.573 124.547 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010920 0.006305 0.000000 0.00000 SCALE2 0.000000 0.012610 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008029 0.00000