PDB Short entry for 1KDK HEADER TRANSPORT PROTEIN 13-NOV-01 1KDK TITLE THE STRUCTURE OF THE N-TERMINAL LG DOMAIN OF SHBG IN CRYSTALS SOAKED TITLE 2 WITH EDTA COMPND MOL_ID: 1; COMPND 2 MOLECULE: SEX HORMONE-BINDING GLOBULIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL LG-DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: JM109; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX-2T KEYWDS SHBG, DHT, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR I.GRISHKOVSKAYA,G.V.AVVAKUMOV,G.L.HAMMOND,Y.A.MULLER REVDAT 4 16-AUG-23 1KDK 1 REMARK SEQADV REVDAT 3 24-FEB-09 1KDK 1 VERSN REVDAT 2 01-APR-03 1KDK 1 JRNL REVDAT 1 15-MAY-02 1KDK 0 JRNL AUTH I.GRISHKOVSKAYA,G.V.AVVAKUMOV,G.L.HAMMOND,Y.A.MULLER JRNL TITL RESOLUTION OF A DISORDERED REGION AT THE ENTRANCE OF THE JRNL TITL 2 HUMAN SEX HORMONE-BINDING GLOBULIN STEROID-BINDING SITE. JRNL REF J.MOL.BIOL. V. 318 621 2002 JRNL REFN ISSN 0022-2836 JRNL PMID 12054810 JRNL DOI 10.1016/S0022-2836(02)00169-9 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 17326 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1924 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1378 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 89 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1KDK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-NOV-01. REMARK 100 THE DEPOSITION ID IS D_1000014838. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93 REMARK 200 MONOCHROMATOR : DIAMOND(111), GE(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19262 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.37000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 1D2S REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG400, ISOPROPANOL, PH 7.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 51.86000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 29.94138 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 28.58667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 51.86000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 29.94138 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 28.58667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 51.86000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 29.94138 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 28.58667 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 51.86000 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 29.94138 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 28.58667 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 51.86000 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 29.94138 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 28.58667 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 51.86000 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 29.94138 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 28.58667 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 59.88277 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 57.17333 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 59.88277 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 57.17333 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 59.88277 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 57.17333 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 59.88277 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 57.17333 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 59.88277 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 57.17333 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 59.88277 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 57.17333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 85.76000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 12 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 50 O HOH A 311 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 56 CB - CG - CD2 ANGL. DEV. = -4.2 DEGREES REMARK 500 PHE A 56 CB - CG - CD1 ANGL. DEV. = 5.1 DEGREES REMARK 500 MET A 68 CG - SD - CE ANGL. DEV. = 12.3 DEGREES REMARK 500 ARG A 72 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ASP A 73 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ARG A 75 NE - CZ - NH1 ANGL. DEV. = 6.8 DEGREES REMARK 500 ARG A 75 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 LEU A 80 CA - CB - CG ANGL. DEV. = 14.9 DEGREES REMARK 500 ARG A 94 NE - CZ - NH1 ANGL. DEV. = -4.1 DEGREES REMARK 500 ASP A 96 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 96 CB - CG - OD2 ANGL. DEV. = -6.1 DEGREES REMARK 500 LYS A 106 CA - CB - CG ANGL. DEV. = 14.9 DEGREES REMARK 500 GLU A 108 CA - CB - CG ANGL. DEV. = 13.7 DEGREES REMARK 500 ASP A 110 CB - CG - OD1 ANGL. DEV. = -6.2 DEGREES REMARK 500 ARG A 123 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG A 125 CD - NE - CZ ANGL. DEV. = 13.4 DEGREES REMARK 500 ARG A 125 NE - CZ - NH1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG A 125 NE - CZ - NH2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ARG A 135 CD - NE - CZ ANGL. DEV. = 14.1 DEGREES REMARK 500 ARG A 140 NE - CZ - NH2 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 154 NH1 - CZ - NH2 ANGL. DEV. = 8.4 DEGREES REMARK 500 ARG A 154 NE - CZ - NH1 ANGL. DEV. = -9.8 DEGREES REMARK 500 ARG A 167 CD - NE - CZ ANGL. DEV. = 11.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 14 86.29 4.70 REMARK 500 GLN A 24 -63.59 -109.40 REMARK 500 THR A 38 -56.58 -123.49 REMARK 500 THR A 40 61.81 -109.08 REMARK 500 ASP A 96 44.01 -96.76 REMARK 500 PRO A 130 155.53 -47.29 REMARK 500 SER A 133 -31.89 166.25 REMARK 500 ARG A 135 -115.62 -38.88 REMARK 500 LEU A 171 -135.83 49.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DHT A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1D2S RELATED DB: PDB REMARK 900 1D2S CRYSTAL STRUCTURE OF THE N-TERMINAL LAMININ G-LIKE DOMAIN OF REMARK 900 SHBG IN COMPLEX WITH DIHYDROTESTOSTERONE REMARK 900 RELATED ID: 1F5F RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE N-TERMINAL G-DOMAIN OF SHBG IN COMPLEX REMARK 900 WITH ZINC DBREF 1KDK A 12 188 UNP P04278 SHBG_HUMAN 1 170 SEQADV 1KDK ASP A 12 UNP P04278 INSERTION SEQADV 1KDK PRO A 130 UNP P04278 INSERTION SEQADV 1KDK LEU A 131 UNP P04278 INSERTION SEQADV 1KDK THR A 132 UNP P04278 INSERTION SEQADV 1KDK SER A 133 UNP P04278 INSERTION SEQADV 1KDK LYS A 134 UNP P04278 INSERTION SEQADV 1KDK ARG A 135 UNP P04278 INSERTION SEQRES 1 A 177 ASP PRO PRO ALA VAL HIS LEU SER ASN GLY PRO GLY GLN SEQRES 2 A 177 GLU PRO ILE ALA VAL MET THR PHE ASP LEU THR LYS ILE SEQRES 3 A 177 THR LYS THR SER SER SER PHE GLU VAL ARG THR TRP ASP SEQRES 4 A 177 PRO GLU GLY VAL ILE PHE TYR GLY ASP THR ASN PRO LYS SEQRES 5 A 177 ASP ASP TRP PHE MET LEU GLY LEU ARG ASP GLY ARG PRO SEQRES 6 A 177 GLU ILE GLN LEU HIS ASN HIS TRP ALA GLN LEU THR VAL SEQRES 7 A 177 GLY ALA GLY PRO ARG LEU ASP ASP GLY ARG TRP HIS GLN SEQRES 8 A 177 VAL GLU VAL LYS MET GLU GLY ASP SER VAL LEU LEU GLU SEQRES 9 A 177 VAL ASP GLY GLU GLU VAL LEU ARG LEU ARG GLN VAL SER SEQRES 10 A 177 GLY PRO LEU THR SER LYS ARG HIS PRO ILE MET ARG ILE SEQRES 11 A 177 ALA LEU GLY GLY LEU LEU PHE PRO ALA SER ASN LEU ARG SEQRES 12 A 177 LEU PRO LEU VAL PRO ALA LEU ASP GLY CYS LEU ARG ARG SEQRES 13 A 177 ASP SER TRP LEU ASP LYS GLN ALA GLU ILE SER ALA SER SEQRES 14 A 177 ALA PRO THR SER LEU ARG SER CYS HET DHT A 301 21 HETNAM DHT 5-ALPHA-DIHYDROTESTOSTERONE FORMUL 2 DHT C19 H30 O2 FORMUL 3 HOH *89(H2 O) HELIX 1 1 PRO A 149 LEU A 153 5 5 HELIX 2 2 ASP A 172 GLN A 174 5 3 SHEET 1 A 6 VAL A 16 HIS A 17 0 SHEET 2 A 6 GLY A 163 TRP A 170 -1 O LEU A 165 N VAL A 16 SHEET 3 A 6 SER A 41 THR A 48 -1 N SER A 43 O SER A 169 SHEET 4 A 6 HIS A 101 GLU A 108 -1 O VAL A 103 N PHE A 44 SHEET 5 A 6 SER A 111 VAL A 116 -1 O LEU A 113 N LYS A 106 SHEET 6 A 6 GLU A 119 LEU A 124 -1 O LEU A 124 N VAL A 112 SHEET 1 B 7 GLN A 86 GLY A 90 0 SHEET 2 B 7 ARG A 75 HIS A 81 -1 N ILE A 78 O VAL A 89 SHEET 3 B 7 ASP A 65 ARG A 72 -1 N MET A 68 O GLN A 79 SHEET 4 B 7 GLY A 53 ASN A 61 -1 N GLY A 58 O PHE A 67 SHEET 5 B 7 ILE A 138 LEU A 143 -1 O ALA A 142 N TYR A 57 SHEET 6 B 7 ALA A 28 ASP A 33 -1 N MET A 30 O ILE A 141 SHEET 7 B 7 GLU A 176 SER A 180 -1 O SER A 178 N THR A 31 SSBOND 1 CYS A 164 CYS A 188 1555 1555 2.04 SITE 1 AC1 10 SER A 41 SER A 42 GLY A 58 ASP A 65 SITE 2 AC1 10 TRP A 66 ASN A 82 VAL A 105 LYS A 134 SITE 3 AC1 10 LEU A 171 HOH A 318 CRYST1 103.720 103.720 85.760 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009641 0.005566 -0.000001 0.00000 SCALE2 0.000000 0.011133 -0.000001 0.00000 SCALE3 0.000000 0.000000 0.011660 0.00000