PDB Short entry for 1KTQ HEADER NUCLEOTIDYLTRANSFERASE 16-AUG-95 1KTQ TITLE DNA POLYMERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE I; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: KLENTAQ; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS AQUATICUS; SOURCE 3 ORGANISM_TAXID: 271; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEOTIDYLTRANSFERASE, DNA-REPLICATION EXPDTA X-RAY DIFFRACTION AUTHOR S.KOROLEV,G.WAKSMAN REVDAT 4 14-FEB-24 1KTQ 1 REMARK REVDAT 3 21-MAR-18 1KTQ 1 REMARK REVDAT 2 24-FEB-09 1KTQ 1 VERSN REVDAT 1 08-NOV-96 1KTQ 0 JRNL AUTH S.KOROLEV,M.NAYAL,W.M.BARNES,E.DI CERA,G.WAKSMAN JRNL TITL CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF THERMUS AQUATICUS JRNL TITL 2 DNA POLYMERASE I AT 2.5-A RESOLUTION: STRUCTURAL BASIS FOR JRNL TITL 3 THERMOSTABILITY. JRNL REF PROC.NATL.ACAD.SCI.USA V. 92 9264 1995 JRNL REFN ISSN 0027-8424 JRNL PMID 7568114 JRNL DOI 10.1073/PNAS.92.20.9264 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.2 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 90.6 REMARK 3 NUMBER OF REFLECTIONS : 20581 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4239 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 2.830 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.32 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.571 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1KTQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000174493. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : R-AXIS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66183 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.6 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR 3.0 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 54.70000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 68.40000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 54.70000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 68.40000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 504 REMARK 465 LYS A 505 REMARK 465 THR A 506 REMARK 465 GLU A 507 REMARK 465 LYS A 508 REMARK 465 THR A 509 REMARK 465 GLY A 510 REMARK 465 LYS A 511 REMARK 465 ARG A 512 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 290 OG REMARK 470 SER A 513 OG REMARK 470 THR A 514 OG1 CG2 REMARK 470 SER A 515 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1435 H2 HOH A 1439 1556 1.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 333 NE2 HIS A 333 CD2 -0.072 REMARK 500 HIS A 480 NE2 HIS A 480 CD2 -0.072 REMARK 500 HIS A 554 NE2 HIS A 554 CD2 -0.074 REMARK 500 HIS A 561 NE2 HIS A 561 CD2 -0.070 REMARK 500 HIS A 621 NE2 HIS A 621 CD2 -0.069 REMARK 500 HIS A 639 NE2 HIS A 639 CD2 -0.067 REMARK 500 HIS A 676 NE2 HIS A 676 CD2 -0.071 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TRP A 299 CD1 - CG - CD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 TRP A 299 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG A 313 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 TRP A 318 CD1 - CG - CD2 ANGL. DEV. = 7.2 DEGREES REMARK 500 TRP A 318 CE2 - CD2 - CG ANGL. DEV. = -5.8 DEGREES REMARK 500 ARG A 334 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 LEU A 359 CA - CB - CG ANGL. DEV. = 15.4 DEGREES REMARK 500 ARG A 392 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 TRP A 398 CD1 - CG - CD2 ANGL. DEV. = 6.7 DEGREES REMARK 500 TRP A 398 CE2 - CD2 - CG ANGL. DEV. = -5.0 DEGREES REMARK 500 TRP A 417 CD1 - CG - CD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 TRP A 417 CE2 - CD2 - CG ANGL. DEV. = -6.1 DEGREES REMARK 500 TRP A 417 CG - CD2 - CE3 ANGL. DEV. = 5.6 DEGREES REMARK 500 TRP A 428 CD1 - CG - CD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 TRP A 428 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG A 450 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG A 563 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG A 563 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 TRP A 604 CD1 - CG - CD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 TRP A 604 CE2 - CD2 - CG ANGL. DEV. = -6.3 DEGREES REMARK 500 TRP A 645 CD1 - CG - CD2 ANGL. DEV. = 7.3 DEGREES REMARK 500 TRP A 645 CE2 - CD2 - CG ANGL. DEV. = -6.1 DEGREES REMARK 500 ARG A 704 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 TRP A 706 CD1 - CG - CD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 TRP A 706 CE2 - CD2 - CG ANGL. DEV. = -6.2 DEGREES REMARK 500 ARG A 736 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 801 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 TRP A 827 CD1 - CG - CD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 TRP A 827 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 292 -167.74 -119.08 REMARK 500 ALA A 293 -131.59 59.05 REMARK 500 ARG A 313 28.69 46.13 REMARK 500 LYS A 314 -142.40 -127.20 REMARK 500 ASP A 381 114.93 -163.00 REMARK 500 PRO A 382 1.53 -67.22 REMARK 500 TYR A 394 32.61 -95.85 REMARK 500 GLU A 400 26.81 -76.37 REMARK 500 VAL A 433 -53.54 -122.22 REMARK 500 LEU A 477 -26.72 -148.24 REMARK 500 ASP A 496 -73.39 -145.94 REMARK 500 ALA A 502 -161.40 -178.62 REMARK 500 THR A 514 -95.59 31.35 REMARK 500 ALA A 516 -59.84 63.98 REMARK 500 ALA A 517 58.60 169.52 REMARK 500 ARG A 523 31.07 -76.35 REMARK 500 ALA A 525 -92.75 -82.24 REMARK 500 ILE A 546 -56.37 -122.80 REMARK 500 ARG A 587 75.52 36.84 REMARK 500 SER A 612 -81.29 -53.81 REMARK 500 PRO A 650 90.47 -44.46 REMARK 500 ARG A 651 -142.24 67.00 REMARK 500 VAL A 654 67.59 21.78 REMARK 500 LEU A 657 -43.50 -22.63 REMARK 500 LEU A 670 -38.64 -25.97 REMARK 500 ALA A 683 73.65 -37.24 REMARK 500 GLU A 687 -58.31 -151.95 REMARK 500 ALA A 735 -3.16 -43.15 REMARK 500 GLU A 774 30.96 -80.31 REMARK 500 HIS A 784 -95.90 39.70 REMARK 500 GLU A 794 -16.16 -48.13 REMARK 500 ARG A 795 12.27 -144.65 REMARK 500 LYS A 831 103.81 -57.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 290 PRO A 291 -58.07 REMARK 500 GLU A 315 PRO A 316 -147.76 REMARK 500 ASP A 655 PRO A 656 -101.97 REMARK 500 REMARK 500 REMARK: NULL DBREF 1KTQ A 290 832 UNP P19821 DPO1_THEAQ 290 832 SEQRES 1 A 543 SER PRO LYS ALA LEU GLU GLU ALA PRO TRP PRO PRO PRO SEQRES 2 A 543 GLU GLY ALA PHE VAL GLY PHE VAL LEU SER ARG LYS GLU SEQRES 3 A 543 PRO MET TRP ALA ASP LEU LEU ALA LEU ALA ALA ALA ARG SEQRES 4 A 543 GLY GLY ARG VAL HIS ARG ALA PRO GLU PRO TYR LYS ALA SEQRES 5 A 543 LEU ARG ASP LEU LYS GLU ALA ARG GLY LEU LEU ALA LYS SEQRES 6 A 543 ASP LEU SER VAL LEU ALA LEU ARG GLU GLY LEU GLY LEU SEQRES 7 A 543 PRO PRO GLY ASP ASP PRO MET LEU LEU ALA TYR LEU LEU SEQRES 8 A 543 ASP PRO SER ASN THR THR PRO GLU GLY VAL ALA ARG ARG SEQRES 9 A 543 TYR GLY GLY GLU TRP THR GLU GLU ALA GLY GLU ARG ALA SEQRES 10 A 543 ALA LEU SER GLU ARG LEU PHE ALA ASN LEU TRP GLY ARG SEQRES 11 A 543 LEU GLU GLY GLU GLU ARG LEU LEU TRP LEU TYR ARG GLU SEQRES 12 A 543 VAL GLU ARG PRO LEU SER ALA VAL LEU ALA HIS MET GLU SEQRES 13 A 543 ALA THR GLY VAL ARG LEU ASP VAL ALA TYR LEU ARG ALA SEQRES 14 A 543 LEU SER LEU GLU VAL ALA GLU GLU ILE ALA ARG LEU GLU SEQRES 15 A 543 ALA GLU VAL PHE ARG LEU ALA GLY HIS PRO PHE ASN LEU SEQRES 16 A 543 ASN SER ARG ASP GLN LEU GLU ARG VAL LEU PHE ASP GLU SEQRES 17 A 543 LEU GLY LEU PRO ALA ILE GLY LYS THR GLU LYS THR GLY SEQRES 18 A 543 LYS ARG SER THR SER ALA ALA VAL LEU GLU ALA LEU ARG SEQRES 19 A 543 GLU ALA HIS PRO ILE VAL GLU LYS ILE LEU GLN TYR ARG SEQRES 20 A 543 GLU LEU THR LYS LEU LYS SER THR TYR ILE ASP PRO LEU SEQRES 21 A 543 PRO ASP LEU ILE HIS PRO ARG THR GLY ARG LEU HIS THR SEQRES 22 A 543 ARG PHE ASN GLN THR ALA THR ALA THR GLY ARG LEU SER SEQRES 23 A 543 SER SER ASP PRO ASN LEU GLN ASN ILE PRO VAL ARG THR SEQRES 24 A 543 PRO LEU GLY GLN ARG ILE ARG ARG ALA PHE ILE ALA GLU SEQRES 25 A 543 GLU GLY TRP LEU LEU VAL ALA LEU ASP TYR SER GLN ILE SEQRES 26 A 543 GLU LEU ARG VAL LEU ALA HIS LEU SER GLY ASP GLU ASN SEQRES 27 A 543 LEU ILE ARG VAL PHE GLN GLU GLY ARG ASP ILE HIS THR SEQRES 28 A 543 GLU THR ALA SER TRP MET PHE GLY VAL PRO ARG GLU ALA SEQRES 29 A 543 VAL ASP PRO LEU MET ARG ARG ALA ALA LYS THR ILE ASN SEQRES 30 A 543 PHE GLY VAL LEU TYR GLY MET SER ALA HIS ARG LEU SER SEQRES 31 A 543 GLN GLU LEU ALA ILE PRO TYR GLU GLU ALA GLN ALA PHE SEQRES 32 A 543 ILE GLU ARG TYR PHE GLN SER PHE PRO LYS VAL ARG ALA SEQRES 33 A 543 TRP ILE GLU LYS THR LEU GLU GLU GLY ARG ARG ARG GLY SEQRES 34 A 543 TYR VAL GLU THR LEU PHE GLY ARG ARG ARG TYR VAL PRO SEQRES 35 A 543 ASP LEU GLU ALA ARG VAL LYS SER VAL ARG GLU ALA ALA SEQRES 36 A 543 GLU ARG MET ALA PHE ASN MET PRO VAL GLN GLY THR ALA SEQRES 37 A 543 ALA ASP LEU MET LYS LEU ALA MET VAL LYS LEU PHE PRO SEQRES 38 A 543 ARG LEU GLU GLU MET GLY ALA ARG MET LEU LEU GLN VAL SEQRES 39 A 543 HIS ASP GLU LEU VAL LEU GLU ALA PRO LYS GLU ARG ALA SEQRES 40 A 543 GLU ALA VAL ALA ARG LEU ALA LYS GLU VAL MET GLU GLY SEQRES 41 A 543 VAL TYR PRO LEU ALA VAL PRO LEU GLU VAL GLU VAL GLY SEQRES 42 A 543 ILE GLY GLU ASP TRP LEU SER ALA LYS GLU FORMUL 2 HOH *440(H2 O) HELIX 1 1 PRO A 316 TRP A 318 5 3 HELIX 2 2 PRO A 338 ASP A 344 1 7 HELIX 3 3 ALA A 353 ARG A 362 1 10 HELIX 4 4 PRO A 373 LEU A 380 1 8 HELIX 5 5 PRO A 387 TYR A 394 1 8 HELIX 6 6 ALA A 402 GLU A 421 1 20 HELIX 7 7 GLU A 424 GLU A 432 1 9 HELIX 8 8 GLU A 434 THR A 447 1 14 HELIX 9 9 VAL A 453 ALA A 478 1 26 HELIX 10 10 ARG A 487 PHE A 495 1 9 HELIX 11 11 VAL A 518 ALA A 521 1 4 HELIX 12 12 PRO A 527 TYR A 545 5 19 HELIX 13 13 LEU A 549 LEU A 552 5 4 HELIX 14 14 LEU A 581 ASN A 583 5 3 HELIX 15 15 PRO A 589 ALA A 597 1 9 HELIX 16 16 ILE A 614 SER A 623 1 10 HELIX 17 17 GLU A 626 GLN A 633 1 8 HELIX 18 18 ILE A 638 PHE A 647 1 10 HELIX 19 19 PRO A 656 VAL A 669 5 14 HELIX 20 20 ALA A 675 GLU A 681 1 7 HELIX 21 21 GLU A 688 SER A 699 1 12 HELIX 22 22 PRO A 701 ARG A 717 1 17 HELIX 23 23 PRO A 731 GLU A 734 5 4 HELIX 24 24 LYS A 738 MET A 775 1 38 HELIX 25 25 LYS A 793 GLU A 808 5 16 HELIX 26 26 TRP A 827 ALA A 830 1 4 SHEET 1 A 3 ARG A 331 ARG A 334 0 SHEET 2 A 3 LEU A 321 ARG A 328 -1 N ARG A 328 O ARG A 331 SHEET 3 A 3 PHE A 306 LEU A 311 -1 N VAL A 310 O LEU A 322 SHEET 1 B 4 VAL A 819 GLY A 824 0 SHEET 2 B 4 TRP A 604 TYR A 611 -1 N ASP A 610 O GLU A 820 SHEET 3 B 4 GLU A 786 PRO A 792 -1 N ALA A 791 O LEU A 605 SHEET 4 B 4 ARG A 778 VAL A 783 -1 N VAL A 783 O GLU A 786 SHEET 1 C 2 TYR A 719 GLU A 721 0 SHEET 2 C 2 ARG A 727 TYR A 729 -1 N ARG A 728 O VAL A 720 CISPEP 1 TRP A 299 PRO A 300 0 -0.31 CISPEP 2 ASP A 578 PRO A 579 0 -10.40 CRYST1 109.400 136.800 45.600 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009141 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007310 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021930 0.00000