PDB Short entry for 1M67 HEADER OXIDOREDUCTASE 12-JUL-02 1M67 TITLE CRYSTAL STRUCTURE OF LEISHMANIA MEXICANA GPDH COMPLEXED WITH INHIBITOR TITLE 2 2-BROMO-6-HYDROXY-PURINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCEROL-3-PHOSPHATE DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GPDH, L-GLYCEROL-3-PHOSPHATE DEHYDROGENASE; COMPND 5 EC: 1.1.1.8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA MEXICANA; SOURCE 3 ORGANISM_TAXID: 5665; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS NAD-BINDING MOTIF, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.CHOE,S.SURESH,G.WISEDCHAISRI,K.J.KENNEDY,M.H.GELB,W.G.J.HOL REVDAT 4 14-FEB-24 1M67 1 REMARK REVDAT 3 13-JUL-11 1M67 1 VERSN REVDAT 2 24-FEB-09 1M67 1 VERSN REVDAT 1 11-DEC-02 1M67 0 JRNL AUTH J.CHOE,S.SURESH,G.WISEDCHAISRI,K.J.KENNEDY,M.H.GELB, JRNL AUTH 2 W.G.J.HOL JRNL TITL ANOMALOUS DIFFERENCES OF LIGHT ELEMENTS IN DETERMINING JRNL TITL 2 PRECISE BINDING MODES OF LIGANDS TO GLYCEROL-3-PHOSPHATE JRNL TITL 3 DEHYDROGENASE JRNL REF CHEM.BIOL. V. 9 1189 2002 JRNL REFN ISSN 1074-5521 JRNL PMID 12445769 JRNL DOI 10.1016/S1074-5521(02)00243-0 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 19165 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.244 REMARK 3 R VALUE (WORKING SET) : 0.244 REMARK 3 FREE R VALUE : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 983 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1304 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2820 REMARK 3 BIN FREE R VALUE SET COUNT : 65 REMARK 3 BIN FREE R VALUE : 0.3750 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2602 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 82 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.70000 REMARK 3 B22 (A**2) : 1.70000 REMARK 3 B33 (A**2) : -3.40000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.378 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.281 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.209 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.071 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.910 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.883 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2668 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3597 ; 1.334 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 344 ; 3.239 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 498 ;17.185 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 424 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1931 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1367 ; 0.250 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 177 ; 0.182 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 71 ; 0.208 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.512 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1708 ; 1.060 ; 1.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2733 ; 2.015 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 960 ; 2.614 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 864 ; 4.042 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1M67 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JUL-02. REMARK 100 THE DEPOSITION ID IS D_1000016648. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-SEP-01 REMARK 200 TEMPERATURE (KELVIN) : 125 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91942 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19175 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 15.40 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 34.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.62000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NACITRATE, TEA, DTT, EDTA, PH 7.2, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 105.86900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.25150 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.25150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 52.93450 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.25150 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.25150 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 158.80350 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.25150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.25150 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 52.93450 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.25150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.25150 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 158.80350 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 105.86900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 7860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 THR A 3 REMARK 465 LYS A 4 REMARK 465 GLN A 5 REMARK 465 HIS A 6 REMARK 465 SER A 7 REMARK 465 ALA A 8 REMARK 465 THR A 294 REMARK 465 SER A 295 REMARK 465 LYS A 296 REMARK 465 ARG A 358 REMARK 465 SER A 359 REMARK 465 ALA A 360 REMARK 465 SER A 361 REMARK 465 THR A 362 REMARK 465 PRO A 363 REMARK 465 SER A 364 REMARK 465 LYS A 365 REMARK 465 LEU A 366 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 9 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 511 O HOH A 519 1.18 REMARK 500 O HOH A 523 O HOH A 553 1.87 REMARK 500 O2 PLM A 401 O HOH A 537 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 155 80.19 -154.50 REMARK 500 PHE A 165 116.92 -34.72 REMARK 500 ILE A 291 -76.11 -64.32 REMARK 500 GLN A 292 108.87 -29.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BOA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLM A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1EVY RELATED DB: PDB REMARK 900 1EVY IS APO LMGPDH STRUCTURE REMARK 900 RELATED ID: 1EVZ RELATED DB: PDB REMARK 900 1EVZ IS LMGPDH : NADH BINARY COMPLEX STRUCTURE REMARK 900 RELATED ID: 1JDJ RELATED DB: PDB REMARK 900 1JDJ IS THE CRYSTAL STRUCTURE OF LEISHMANIA MEXICANA GLYCEROL-3- REMARK 900 PHOSPHATE DEHYDROGENASE IN COMPLEX WITH 2-FLUORO-6- CHLOROPURINE REMARK 900 RELATED ID: 1M66 RELATED DB: PDB REMARK 900 1M66 IS THE CRYSTAL STRUCTURE OF LEISHMANIA MEXICANA GPDH COMPLEXED REMARK 900 WITH INHIBITOR 2-BROMO-6-CHLORO-PURINE DBREF 1M67 A 1 366 UNP P90551 P90551_LEIME 1 366 SEQRES 1 A 366 MET SER THR LYS GLN HIS SER ALA LYS ASP GLU LEU LEU SEQRES 2 A 366 TYR LEU ASN LYS ALA VAL VAL PHE GLY SER GLY ALA PHE SEQRES 3 A 366 GLY THR ALA LEU ALA MET VAL LEU SER LYS LYS CYS ARG SEQRES 4 A 366 GLU VAL CYS VAL TRP HIS MET ASN GLU GLU GLU VAL ARG SEQRES 5 A 366 LEU VAL ASN GLU LYS ARG GLU ASN VAL LEU PHE LEU LYS SEQRES 6 A 366 GLY VAL GLN LEU ALA SER ASN ILE THR PHE THR SER ASP SEQRES 7 A 366 VAL GLU LYS ALA TYR ASN GLY ALA GLU ILE ILE LEU PHE SEQRES 8 A 366 VAL ILE PRO THR GLN PHE LEU ARG GLY PHE PHE GLU LYS SEQRES 9 A 366 SER GLY GLY ASN LEU ILE ALA TYR ALA LYS GLU LYS GLN SEQRES 10 A 366 VAL PRO VAL LEU VAL CYS THR LYS GLY ILE GLU ARG SER SEQRES 11 A 366 THR LEU LYS PHE PRO ALA GLU ILE ILE GLY GLU PHE LEU SEQRES 12 A 366 PRO SER PRO LEU LEU SER VAL LEU ALA GLY PRO SER PHE SEQRES 13 A 366 ALA ILE GLU VAL ALA THR GLY VAL PHE THR CYS VAL SER SEQRES 14 A 366 ILE ALA SER ALA ASP ILE ASN VAL ALA ARG ARG LEU GLN SEQRES 15 A 366 ARG ILE MET SER THR GLY ASP ARG SER PHE VAL CYS TRP SEQRES 16 A 366 ALA THR THR ASP THR VAL GLY CYS GLU VAL ALA SER ALA SEQRES 17 A 366 VAL LYS ASN VAL LEU ALA ILE GLY SER GLY VAL ALA ASN SEQRES 18 A 366 GLY LEU GLY MET GLY LEU ASN ALA ARG ALA ALA LEU ILE SEQRES 19 A 366 MET ARG GLY LEU LEU GLU ILE ARG ASP LEU THR ALA ALA SEQRES 20 A 366 LEU GLY GLY ASP GLY SER ALA VAL PHE GLY LEU ALA GLY SEQRES 21 A 366 LEU GLY ASP LEU GLN LEU THR CYS SER SER GLU LEU SER SEQRES 22 A 366 ARG ASN PHE THR VAL GLY LYS LYS LEU GLY LYS GLY LEU SEQRES 23 A 366 PRO ILE GLU GLU ILE GLN ARG THR SER LYS ALA VAL ALA SEQRES 24 A 366 GLU GLY VAL ALA THR ALA ASP PRO LEU MET ARG LEU ALA SEQRES 25 A 366 LYS GLN LEU LYS VAL LYS MET PRO LEU CYS HIS GLN ILE SEQRES 26 A 366 TYR GLU ILE VAL TYR LYS LYS LYS ASN PRO ARG ASP ALA SEQRES 27 A 366 LEU ALA ASP LEU LEU SER CYS GLY LEU GLN ASP GLU GLY SEQRES 28 A 366 LEU PRO PRO LEU PHE LYS ARG SER ALA SER THR PRO SER SEQRES 29 A 366 LYS LEU HET BOA A 402 11 HET PLM A 401 18 HETNAM BOA 2-BROMO-6-HYDROXY-PURINE HETNAM PLM PALMITIC ACID FORMUL 2 BOA C5 H3 BR N4 O FORMUL 3 PLM C16 H32 O2 FORMUL 4 HOH *82(H2 O) HELIX 1 1 GLY A 24 LYS A 36 1 13 HELIX 2 2 ASN A 47 ARG A 58 1 12 HELIX 3 3 ASP A 78 ASN A 84 1 7 HELIX 4 4 PRO A 94 GLN A 117 1 24 HELIX 5 5 PHE A 134 GLY A 140 1 7 HELIX 6 6 PRO A 144 PRO A 146 5 3 HELIX 7 7 PHE A 156 THR A 162 1 7 HELIX 8 8 ASP A 174 SER A 186 1 13 HELIX 9 9 ASP A 199 LEU A 223 1 25 HELIX 10 10 GLY A 226 LEU A 248 1 23 HELIX 11 11 GLY A 260 SER A 269 1 10 HELIX 12 12 SER A 273 GLY A 285 1 13 HELIX 13 13 PRO A 287 GLN A 292 1 6 HELIX 14 14 ALA A 299 LEU A 315 1 17 HELIX 15 15 MET A 319 LYS A 331 1 13 HELIX 16 16 ASN A 334 LEU A 343 1 10 HELIX 17 17 SER A 344 GLY A 346 5 3 SHEET 1 A 8 ILE A 73 THR A 76 0 SHEET 2 A 8 CYS A 38 TRP A 44 1 N VAL A 41 O THR A 74 SHEET 3 A 8 LEU A 15 PHE A 21 1 N VAL A 20 O TRP A 44 SHEET 4 A 8 ILE A 89 PHE A 91 1 O LEU A 90 N PHE A 21 SHEET 5 A 8 VAL A 120 VAL A 122 1 O LEU A 121 N ILE A 89 SHEET 6 A 8 LEU A 148 ALA A 152 1 O SER A 149 N VAL A 122 SHEET 7 A 8 THR A 166 ALA A 171 -1 O SER A 169 N ALA A 152 SHEET 8 A 8 PHE A 192 THR A 197 1 O VAL A 193 N THR A 166 SITE 1 AC1 1 PHE A 97 SITE 1 AC2 10 PHE A 165 VAL A 219 ALA A 220 MET A 225 SITE 2 AC2 10 ALA A 229 GLN A 324 ILE A 325 ILE A 328 SITE 3 AC2 10 LEU A 342 HOH A 537 CRYST1 70.503 70.503 211.738 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014184 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014184 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004723 0.00000