PDB Short entry for 1MIA HEADER HYDROLASE 23-AUG-02 1MIA TITLE HOMOLOGY MODEL OF CASPASE-7 WITH AC-DEVD INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: CASPASE-7; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1-137; COMPND 5 EC: 3.4.22.-; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CASPASE-7; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: RESIDUES 137-229; COMPND 10 EC: 3.4.22.-; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: (ACE)DEVD; COMPND 13 CHAIN: C; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 6 ORGANISM_COMMON: HUMAN; SOURCE 7 MOL_ID: 3; SOURCE 8 SYNTHETIC: YES; SOURCE 9 OTHER_DETAILS: CHEMICALLY SYNTHESIZED KEYWDS CASPASE-7 WITH INHIBITOR AC-DEVD, CYSTEINE PROTEASE, KEYWDS 2 APOPTOSIS, HOMOLOGY MODEL OF CASPASE-7 EXPDTA THEORETICAL MODEL AUTHOR R.SATTAR,A.ABBASI,A.SALIM REVDAT 1 11-SEP-02 1MIA 0 JRNL AUTH R.SATTAR,A.ABBASI,A.SALIM JRNL TITL PREDICTED 3-D STRUCTURE OF CASPASE-7 AND ITS JRNL TITL 2 INTERACTION WITH AC-DEVD INHIBITOR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1MIA COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-AUG-2002. REMARK 100 THE RCSB ID CODE IS RCSB016933. REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: MODEL IS BASED UPON THE COORDINATES OF 1PAU X-RAY REMARK 220 CRYSTAL STRUCTURE OF STRUCTURE OF CASPOASE-3 REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR B 137 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),F6.3) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ACE C 501 C ASP C 502 N 0.253 REMARK 500 ASP C 505 C ASP C 505 O 0.185 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN A 56 C - N - CA ANGL. DEV. = 18.4 DEGREES REMARK 500 HIS B 178 N - CA - C ANGL. DEV. = 15.1 DEGREES REMARK 500 HIS B 178 C - N - CA ANGL. DEV. = 14.3 DEGREES DBREF 1MIA A 1 137 UNP P55210 ICE7_HUMAN 57 193 DBREF 1MIA B 137 229 UNP P55210 ICE7_HUMAN 211 303 SEQRES 1 A 137 THR TYR GLN TYR ASN MET ASN PHE GLU LYS LEU GLY LYS SEQRES 2 A 137 CYS ILE ILE ILE ASN ASN LYS ASN PHE ASP LYS VAL THR SEQRES 3 A 137 GLY MET GLY VAL ARG ASN GLY THR ASP LYS ASP ALA GLU SEQRES 4 A 137 ALA LEU PHE LYS CYS PHE ARG SER LEU GLY PHE ASP VAL SEQRES 5 A 137 ILE VAL TYR ASN ASP CYS SER CYS ALA LYS MET GLN ASP SEQRES 6 A 137 LEU LEU LYS LYS ALA SER GLU GLU ASP HIS THR ASN ALA SEQRES 7 A 137 ALA CYS PHE ALA CYS ILE LEU LEU SER HIS GLY GLU GLU SEQRES 8 A 137 ASN VAL ILE TYR GLY LYS ASP GLY VAL THR PRO ILE LYS SEQRES 9 A 137 ASP LEU THR ALA HIS PHE ARG GLY ASP ARG CYS LYS THR SEQRES 10 A 137 LEU LEU GLU LYS PRO LYS LEU PHE PHE ILE GLN ALA CYS SEQRES 11 A 137 ARG GLY THR GLU LEU ASP ASP SEQRES 1 B 93 TYR LYS ILE PRO VAL GLU ALA ASP PHE LEU PHE ALA TYR SEQRES 2 B 93 SER THR VAL PRO GLY TYR TYR SER TRP ARG SER PRO GLY SEQRES 3 B 93 ARG GLY SER TRP PHE VAL GLN ALA LEU CYS SER ILE LEU SEQRES 4 B 93 GLU GLU HIS GLY LYS ASP LEU GLU ILE MET GLN ILE LEU SEQRES 5 B 93 THR ARG VAL ASN ASP ARG VAL ALA ARG HIS PHE GLU SER SEQRES 6 B 93 GLN SER ASP ASP PRO HIS PHE HIS GLU LYS LYS GLN ILE SEQRES 7 B 93 PRO CYS VAL VAL SER MET LEU THR LYS GLU LEU TYR PHE SEQRES 8 B 93 SER GLN SEQRES 1 C 5 ACE ASP GLU VAL ASP HET ACE C 501 3 HETNAM ACE ACETYL GROUP FORMUL 3 ACE C2 H4 O HELIX 1 1 GLY A 33 SER A 47 1 15 HELIX 2 2 CYS A 60 GLU A 72 1 13 HELIX 3 3 ILE A 103 HIS A 109 1 7 HELIX 4 4 CYS A 115 LEU A 119 5 5 HELIX 5 5 TRP B 166 GLU B 177 1 12 HELIX 6 6 GLU B 183 PHE B 199 1 17 SHEET 1 A 6 PHE A 50 TYR A 55 0 SHEET 2 A 6 LYS A 10 ASN A 18 1 N GLY A 12 O ASP A 51 SHEET 3 A 6 ALA A 78 LEU A 86 1 O ILE A 84 N ILE A 15 SHEET 4 A 6 LYS A 123 GLN A 128 1 O LEU A 124 N PHE A 81 SHEET 5 A 6 PHE B 145 TYR B 149 1 O LEU B 146 N PHE A 125 SHEET 6 A 6 CYS B 216 SER B 219 -1 O CYS B 216 N TYR B 149 SHEET 1 B 3 GLY A 89 GLU A 90 0 SHEET 2 B 3 VAL A 93 TYR A 95 -1 O VAL A 93 N GLU A 90 SHEET 3 B 3 VAL A 100 PRO A 102 -1 O THR A 101 N ILE A 94 SHEET 1 C 2 GLY A 132 GLU A 134 0 SHEET 2 C 2 GLY B 154 TYR B 155 1 O GLY B 154 N GLU A 134 SHEET 1 D 3 GLY B 164 SER B 165 0 SHEET 2 D 3 TRP B 158 SER B 160 -1 N SER B 160 O GLY B 164 SHEET 3 D 3 GLU C 503 VAL C 504 -1 O GLU C 503 N ARG B 159 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000