PDB Short entry for 1MKG
HEADER    HORMONE/GROWTH FACTOR                   29-AUG-02   1MKG              
TITLE     DISULFIDE DEFICIENT MUTANT OF VASCULAR ENDOTHELIAL GROWTH FACTOR A    
TITLE    2 (C57A AND C102A)                                                     
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: VASCULAR ENDOTHELIAL GROWTH FACTOR A;                      
COMPND   3 CHAIN: A, B, C, D;                                                   
COMPND   4 FRAGMENT: RESIDUES 40-134, SEQUENCE DATABASE;                        
COMPND   5 SYNONYM: VEGF-A, VASCULAR PERMEABILITY FACTOR, VPF;                  
COMPND   6 ENGINEERED: YES;                                                     
COMPND   7 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   7 EXPRESSION_SYSTEM_STRAIN: B843(DE3)PLYSS;                            
SOURCE   8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   9 EXPRESSION_SYSTEM_PLASMID: PET-3D                                    
KEYWDS    CYSTINE-KNOT GROWTH FACTOR, HORMONE-GROWTH FACTOR COMPLEX             
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    Y.A.MULLER,C.HEIRING,R.MISSELWITZ,K.WELFLE,H.WELFLE                   
REVDAT   4   27-OCT-21 1MKG    1       REMARK SEQADV                            
REVDAT   3   11-OCT-17 1MKG    1       REMARK                                   
REVDAT   2   24-FEB-09 1MKG    1       VERSN                                    
REVDAT   1   11-DEC-02 1MKG    0                                                
JRNL        AUTH   Y.A.MULLER,C.HEIRING,R.MISSELWITZ,K.WELFLE,H.WELFLE          
JRNL        TITL   THE CYSTINE KNOT PROMOTES FOLDING AND NOT THERMODYNAMIC      
JRNL        TITL 2 STABILITY IN VASCULAR ENDOTHELIAL GROWTH FACTOR              
JRNL        REF    J.BIOL.CHEM.                  V. 277 43410 2002              
JRNL        REFN                   ISSN 0021-9258                               
JRNL        PMID   12207021                                                     
JRNL        DOI    10.1074/JBC.M206438200                                       
REMARK   1                                                                      
REMARK   1 REFERENCE 1                                                          
REMARK   1  AUTH   C.HEIRING,Y.A.MULLER                                         
REMARK   1  TITL   FOLDING SCREENING ASSAYED BY LIMITED PROTEOLYSIS:            
REMARK   1  TITL 2 APPLICATION TO VARIOUS CYSTINE DELETION MUTANTS OF VASCULAR  
REMARK   1  TITL 3 ENDOTHELIAL GROWTH FACTOR                                    
REMARK   1  REF    PROTEIN ENG.                  V.  14   183 2001              
REMARK   1  REFN                   ISSN 0269-2139                               
REMARK   1  DOI    10.1093/PROTEIN/14.3.183                                     
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.50 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS                                                  
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,              
REMARK   3               : READ,RICE,SIMONSON,WARREN                            
REMARK   3                                                                      
REMARK   3  REFINEMENT TARGET : ENGH & HUBER                                    
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 38.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : NULL                           
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : NULL                           
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 98.6                           
REMARK   3   NUMBER OF REFLECTIONS             : 22584                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : R-FREE                          
REMARK   3   FREE R VALUE TEST SET SELECTION  : RESOLUTION SPHERES              
REMARK   3   R VALUE            (WORKING SET) : 0.238                           
REMARK   3   FREE R VALUE                     : 0.288                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : NULL                            
REMARK   3   FREE R VALUE TEST SET COUNT      : 2270                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : NULL                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : NULL                         
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : NULL                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : NULL                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : NULL                         
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : NULL                         
REMARK   3   BIN R VALUE           (WORKING SET) : NULL                         
REMARK   3   BIN FREE R VALUE                    : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : NULL                         
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : NULL                         
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 3036                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 0                                       
REMARK   3   SOLVENT ATOMS            : 134                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 41.23                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 6.48900                                              
REMARK   3    B22 (A**2) : 6.48900                                              
REMARK   3    B33 (A**2) : -12.97900                                            
REMARK   3    B12 (A**2) : -0.63800                                             
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : NULL                            
REMARK   3   ESD FROM SIGMAA              (A) : NULL                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : NULL                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : NULL                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : NULL                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.011                           
REMARK   3   BOND ANGLES            (DEGREES) : 1.510                           
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : NULL                            
REMARK   3   IMPROPER ANGLES        (DEGREES) : NULL                            
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : NULL                                      
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : NULL                                                 
REMARK   3   KSOL        : NULL                                                 
REMARK   3   BSOL        : NULL                                                 
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1MKG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-SEP-02.                  
REMARK 100 THE DEPOSITION ID IS D_1000016981.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 02-AUG-00                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 4.6                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : EMBL/DESY, HAMBURG                 
REMARK 200  BEAMLINE                       : BW7B                               
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.8423                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : IMAGE PLATE                        
REMARK 200  DETECTOR MANUFACTURER          : MARRESEARCH                        
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : XDS                                
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 22584                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.500                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 38.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 98.6                               
REMARK 200  DATA REDUNDANCY                : 4.700                              
REMARK 200  R MERGE                    (I) : 0.06600                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 14.8400                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.65                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 99.0                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 4.74                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.40000                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.920                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: AMORE                                                 
REMARK 200 STARTING MODEL: PDB ENTRY 2VPF                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 67.22                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.75                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: NA-FORMATE 2.0 M, NA-ACETATE 0.1 M, PH   
REMARK 280  4.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K                
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65                             
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+2/3                                            
REMARK 290       3555   -X+Y,-X,Z+1/3                                           
REMARK 290       4555   -X,-Y,Z+1/2                                             
REMARK 290       5555   Y,-X+Y,Z+1/6                                            
REMARK 290       6555   X-Y,X,Z+5/6                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       83.93333            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       41.96667            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000       62.95000            
REMARK 290   SMTRY1   5  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   5 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000       20.98333            
REMARK 290   SMTRY1   6  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000      104.91667            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2, 3                                                 
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 2600 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 10700 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 2590 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 10880 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 3                                                       
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC                 
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 7200 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 19570 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D                            
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A    13                                                      
REMARK 465     LYS A   108                                                      
REMARK 465     MET B    13                                                      
REMARK 465     LYS B   108                                                      
REMARK 465     MET C    13                                                      
REMARK 465     LYS C   108                                                      
REMARK 465     MET D    13                                                      
REMARK 465     LYS D   108                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    CYS A  26      121.02    -21.49                                   
REMARK 500    ASP A  41      -81.01    -65.99                                   
REMARK 500    GLU A  42       57.51    -45.49                                   
REMARK 500    SER A  74      153.04    165.52                                   
REMARK 500    PRO A  85      131.54    -33.38                                   
REMARK 500    GLN A  89       77.61   -116.75                                   
REMARK 500    CYS B  26      103.28    -18.27                                   
REMARK 500    ASP B  63       10.84   -157.88                                   
REMARK 500    GLU B  64      -61.71     50.39                                   
REMARK 500    PRO C  40       -1.40    -54.06                                   
REMARK 500    ASP C  41      -60.59    -96.32                                   
REMARK 500    GLU C  42       47.50    -64.12                                   
REMARK 500    SER C  74      153.66    175.54                                   
REMARK 500    GLN C  87       -3.96   -153.42                                   
REMARK 500    CYS D  26      117.96    -18.25                                   
REMARK 500    GLU D  42       40.26    -89.72                                   
REMARK 500    GLN D  87       50.30   -145.97                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500    TYR D  45         0.07    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 2VPF   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF WILD-TYPE VASCULAR ENDOTHELIAL GROWTH FACTOR    
REMARK 900 RELATED ID: 1MJV   RELATED DB: PDB                                   
REMARK 900 DISULFIDE DEFICIENT MUTANT OF VASCULAR ENDOTHELIAL GROWTH FACTOR A   
REMARK 900 (C51A AND C60A)                                                      
REMARK 900 RELATED ID: 1MKK   RELATED DB: PDB                                   
REMARK 900 DISULFIDE DEFICIENT MUTANT OF VASCULAR ENDOTHELIAL GROWTH FACTOR A   
REMARK 900 (C61A AND C104A)                                                     
DBREF  1MKG A   14   108  UNP    P15692   VEGFA_HUMAN     40    134             
DBREF  1MKG B   14   108  UNP    P15692   VEGFA_HUMAN     40    134             
DBREF  1MKG C   14   108  UNP    P15692   VEGFA_HUMAN     40    134             
DBREF  1MKG D   14   108  UNP    P15692   VEGFA_HUMAN     40    134             
SEQADV 1MKG MET A   13  UNP  P15692              CLONING ARTIFACT               
SEQADV 1MKG ALA A   57  UNP  P15692    CYS    83 ENGINEERED MUTATION            
SEQADV 1MKG ALA A  102  UNP  P15692    CYS   128 ENGINEERED MUTATION            
SEQADV 1MKG MET B   13  UNP  P15692              CLONING ARTIFACT               
SEQADV 1MKG ALA B   57  UNP  P15692    CYS    83 ENGINEERED MUTATION            
SEQADV 1MKG ALA B  102  UNP  P15692    CYS   128 ENGINEERED MUTATION            
SEQADV 1MKG MET C   13  UNP  P15692              CLONING ARTIFACT               
SEQADV 1MKG ALA C   57  UNP  P15692    CYS    83 ENGINEERED MUTATION            
SEQADV 1MKG ALA C  102  UNP  P15692    CYS   128 ENGINEERED MUTATION            
SEQADV 1MKG MET D   13  UNP  P15692              CLONING ARTIFACT               
SEQADV 1MKG ALA D   57  UNP  P15692    CYS    83 ENGINEERED MUTATION            
SEQADV 1MKG ALA D  102  UNP  P15692    CYS   128 ENGINEERED MUTATION            
SEQRES   1 A   96  MET VAL VAL LYS PHE MET ASP VAL TYR GLN ARG SER TYR          
SEQRES   2 A   96  CYS HIS PRO ILE GLU THR LEU VAL ASP ILE PHE GLN GLU          
SEQRES   3 A   96  TYR PRO ASP GLU ILE GLU TYR ILE PHE LYS PRO SER CYS          
SEQRES   4 A   96  VAL PRO LEU MET ARG ALA GLY GLY CYS CYS ASN ASP GLU          
SEQRES   5 A   96  GLY LEU GLU CYS VAL PRO THR GLU GLU SER ASN ILE THR          
SEQRES   6 A   96  MET GLN ILE MET ARG ILE LYS PRO HIS GLN GLY GLN HIS          
SEQRES   7 A   96  ILE GLY GLU MET SER PHE LEU GLN HIS ASN LYS ALA GLU          
SEQRES   8 A   96  CYS ARG PRO LYS LYS                                          
SEQRES   1 B   96  MET VAL VAL LYS PHE MET ASP VAL TYR GLN ARG SER TYR          
SEQRES   2 B   96  CYS HIS PRO ILE GLU THR LEU VAL ASP ILE PHE GLN GLU          
SEQRES   3 B   96  TYR PRO ASP GLU ILE GLU TYR ILE PHE LYS PRO SER CYS          
SEQRES   4 B   96  VAL PRO LEU MET ARG ALA GLY GLY CYS CYS ASN ASP GLU          
SEQRES   5 B   96  GLY LEU GLU CYS VAL PRO THR GLU GLU SER ASN ILE THR          
SEQRES   6 B   96  MET GLN ILE MET ARG ILE LYS PRO HIS GLN GLY GLN HIS          
SEQRES   7 B   96  ILE GLY GLU MET SER PHE LEU GLN HIS ASN LYS ALA GLU          
SEQRES   8 B   96  CYS ARG PRO LYS LYS                                          
SEQRES   1 C   96  MET VAL VAL LYS PHE MET ASP VAL TYR GLN ARG SER TYR          
SEQRES   2 C   96  CYS HIS PRO ILE GLU THR LEU VAL ASP ILE PHE GLN GLU          
SEQRES   3 C   96  TYR PRO ASP GLU ILE GLU TYR ILE PHE LYS PRO SER CYS          
SEQRES   4 C   96  VAL PRO LEU MET ARG ALA GLY GLY CYS CYS ASN ASP GLU          
SEQRES   5 C   96  GLY LEU GLU CYS VAL PRO THR GLU GLU SER ASN ILE THR          
SEQRES   6 C   96  MET GLN ILE MET ARG ILE LYS PRO HIS GLN GLY GLN HIS          
SEQRES   7 C   96  ILE GLY GLU MET SER PHE LEU GLN HIS ASN LYS ALA GLU          
SEQRES   8 C   96  CYS ARG PRO LYS LYS                                          
SEQRES   1 D   96  MET VAL VAL LYS PHE MET ASP VAL TYR GLN ARG SER TYR          
SEQRES   2 D   96  CYS HIS PRO ILE GLU THR LEU VAL ASP ILE PHE GLN GLU          
SEQRES   3 D   96  TYR PRO ASP GLU ILE GLU TYR ILE PHE LYS PRO SER CYS          
SEQRES   4 D   96  VAL PRO LEU MET ARG ALA GLY GLY CYS CYS ASN ASP GLU          
SEQRES   5 D   96  GLY LEU GLU CYS VAL PRO THR GLU GLU SER ASN ILE THR          
SEQRES   6 D   96  MET GLN ILE MET ARG ILE LYS PRO HIS GLN GLY GLN HIS          
SEQRES   7 D   96  ILE GLY GLU MET SER PHE LEU GLN HIS ASN LYS ALA GLU          
SEQRES   8 D   96  CYS ARG PRO LYS LYS                                          
FORMUL   5  HOH   *134(H2 O)                                                    
HELIX    1   1 LYS A   16  SER A   24  1                                   9    
HELIX    2   2 ILE A   35  TYR A   39  1                                   5    
HELIX    3   3 LYS B   16  SER B   24  1                                   9    
HELIX    4   4 ILE B   35  TYR B   39  1                                   5    
HELIX    5   5 PRO B   40  ILE B   43  5                                   4    
HELIX    6   6 LYS C   16  TYR C   25  1                                  10    
HELIX    7   7 ILE C   35  TYR C   39  1                                   5    
HELIX    8   8 LYS D   16  SER D   24  1                                   9    
HELIX    9   9 ILE D   35  TYR D   39  1                                   5    
HELIX   10  10 PRO D   40  ILE D   43  5                                   4    
SHEET    1   A 2 HIS A  27  ASP A  34  0                                        
SHEET    2   A 2 CYS A  51  GLY A  58 -1  O  LEU A  54   N  THR A  31           
SHEET    1   B 2 ILE A  46  LYS A  48  0                                        
SHEET    2   B 2 MET A  81  ILE A  83 -1  O  ILE A  83   N  ILE A  46           
SHEET    1   C 2 LEU A  66  GLN A  79  0                                        
SHEET    2   C 2 GLU A  93  PRO A 106 -1  O  GLN A  98   N  SER A  74           
SHEET    1   D 2 HIS B  27  ASP B  34  0                                        
SHEET    2   D 2 CYS B  51  GLY B  58 -1  O  LEU B  54   N  THR B  31           
SHEET    1   E 3 ILE B  46  LYS B  48  0                                        
SHEET    2   E 3 LEU B  66  LYS B  84 -1  O  ILE B  83   N  ILE B  46           
SHEET    3   E 3 GLY B  88  PRO B 106 -1  O  GLY B  92   N  ILE B  80           
SHEET    1   F 2 HIS C  27  ASP C  34  0                                        
SHEET    2   F 2 CYS C  51  GLY C  58 -1  O  VAL C  52   N  VAL C  33           
SHEET    1   G 3 PHE C  47  LYS C  48  0                                        
SHEET    2   G 3 LEU C  66  ILE C  83 -1  O  MET C  81   N  LYS C  48           
SHEET    3   G 3 GLN C  89  PRO C 106 -1  O  GLN C  98   N  SER C  74           
SHEET    1   H 2 HIS D  27  ASP D  34  0                                        
SHEET    2   H 2 CYS D  51  GLY D  58 -1  O  ARG D  56   N  ILE D  29           
SHEET    1   I 3 ILE D  46  LYS D  48  0                                        
SHEET    2   I 3 LEU D  66  ILE D  83 -1  O  ILE D  83   N  ILE D  46           
SHEET    3   I 3 GLN D  89  PRO D 106 -1  O  GLY D  92   N  ILE D  80           
SSBOND   1 CYS A   26    CYS A   68                          1555   1555  2.05  
SSBOND   2 CYS A   51    CYS B   60                          1555   1555  2.05  
SSBOND   3 CYS A   60    CYS B   51                          1555   1555  2.07  
SSBOND   4 CYS A   61    CYS A  104                          1555   1555  2.04  
SSBOND   5 CYS B   26    CYS B   68                          1555   1555  2.03  
SSBOND   6 CYS B   61    CYS B  104                          1555   1555  2.03  
SSBOND   7 CYS C   26    CYS C   68                          1555   1555  2.04  
SSBOND   8 CYS C   51    CYS D   60                          1555   1555  2.05  
SSBOND   9 CYS C   60    CYS D   51                          1555   1555  2.08  
SSBOND  10 CYS C   61    CYS C  104                          1555   1555  2.06  
SSBOND  11 CYS D   26    CYS D   68                          1555   1555  2.04  
SSBOND  12 CYS D   61    CYS D  104                          1555   1555  2.03  
CISPEP   1 LYS A   48    PRO A   49          0        -0.35                     
CISPEP   2 LYS B   48    PRO B   49          0        -0.27                     
CISPEP   3 LYS C   48    PRO C   49          0        -0.45                     
CISPEP   4 LYS D   48    PRO D   49          0        -0.27                     
CRYST1   96.200   96.200  125.900  90.00  90.00 120.00 P 65         24          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.010395  0.006002  0.000000        0.00000                         
SCALE2      0.000000  0.012003  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.007943        0.00000