PDB Short entry for 1MLD HEADER OXIDOREDUCTASE(NAD(A)-CHOH(D)) 24-JAN-94 1MLD TITLE REFINED STRUCTURE OF MITOCHONDRIAL MALATE DEHYDROGENASE TITLE 2 FROM PORCINE HEART AND THE CONSENSUS STRUCTURE FOR TITLE 3 DICARBOXYLIC ACID OXIDOREDUCTASES COMPND MOL_ID: 1; COMPND 2 MOLECULE: MALATE DEHYDROGENASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 1.1.1.37; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 3 ORGANISM_COMMON: PIG; SOURCE 4 ORGANISM_TAXID: 9823 KEYWDS OXIDOREDUCTASE(NAD(A)-CHOH(D)) EXPDTA X-RAY DIFFRACTION AUTHOR W.B.GLEASON,Z.FU,J.J.BIRKTOFT,L.J.BANASZAK REVDAT 3 24-FEB-09 1MLD 1 VERSN REVDAT 2 01-APR-03 1MLD 1 JRNL REVDAT 1 26-JAN-95 1MLD 0 JRNL AUTH W.B.GLEASON,Z.FU,J.BIRKTOFT,L.BANASZAK JRNL TITL REFINED CRYSTAL STRUCTURE OF MITOCHONDRIAL MALATE JRNL TITL 2 DEHYDROGENASE FROM PORCINE HEART AND THE CONSENSUS JRNL TITL 3 STRUCTURE FOR DICARBOXYLIC ACID OXIDOREDUCTASES. JRNL REF BIOCHEMISTRY V. 33 2078 1994 JRNL REFN ISSN 0006-2960 JRNL PMID 8117664 JRNL DOI 10.1021/BI00174A014 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.A.KELLY,M.NISHIYAMA,Y.OHNISHI,T.BEPPU, REMARK 1 AUTH 2 J.J.BIRKTOFT REMARK 1 TITL DETERMINANTS OF PROTEIN THERMOSTABILITY OBSERVED REMARK 1 TITL 2 IN THE 1.9 ANGSTROM CRYSTAL STRUCTURE OF MALATE REMARK 1 TITL 3 DEHYDROGENASE FROM THE THERMOPHILIC BACTERIUM REMARK 1 TITL 4 THERMUS FLAVUS REMARK 1 REF BIOCHEMISTRY V. 32 3913 1993 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 2 REMARK 1 AUTH J.J.BIRKTOFT,G.RHODES,L.J.BANASZAK REMARK 1 TITL REFINED CRYSTAL STRUCTURE OF CYTOPLASMIC MALATE REMARK 1 TITL 2 DEHYDROGENASE AT 2.5 ANGSTROMS RESOLUTION REMARK 1 REF BIOCHEMISTRY V. 28 6065 1989 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 3 REMARK 1 AUTH J.J.BIRKTOFT,Z.FU,G.E.CARNAHAN,G.RODES, REMARK 1 AUTH 2 S.L.RODERICK,L.J.BANASZAK REMARK 1 TITL COMPARISON OF THE MOLECULAR STRUCTURES OF REMARK 1 TITL 2 CYTOPLASMIC AND MITOCHONDRIAL MALATE DEHYDROGENASES REMARK 1 REF BIOCHEM.SOC.TRANS. V. 17 301 1989 REMARK 1 REFN ISSN 0300-5127 REMARK 1 REFERENCE 4 REMARK 1 AUTH S.L.RODERICK,L.J.BANASZAK REMARK 1 TITL THE THREE DIMENSIONAL STRUCTURE OF PORCINE HEART REMARK 1 TITL 2 MITOCHONDRIAL MALATE DEHYDROGENASE AT 3.0 ANGSTROM REMARK 1 TITL 3 RESOLUTION REMARK 1 REF J.BIOL.CHEM. V. 261 9461 1986 REMARK 1 REFN ISSN 0021-9258 REMARK 2 REMARK 2 RESOLUTION. 1.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 83454 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9240 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 52 REMARK 3 SOLVENT ATOMS : 521 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.015 REMARK 3 BOND ANGLES (DEGREES) : 3.20 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1MLD COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 73.38000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 314 REMARK 465 LYS B 314 REMARK 465 LYS C 314 REMARK 465 LYS D 314 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 46 NE2 HIS A 46 CD2 -0.076 REMARK 500 HIS A 107 NE2 HIS A 107 CD2 -0.071 REMARK 500 HIS A 134 NE2 HIS A 134 CD2 -0.066 REMARK 500 HIS A 176 NE2 HIS A 176 CD2 -0.069 REMARK 500 HIS B 46 NE2 HIS B 46 CD2 -0.072 REMARK 500 HIS B 134 NE2 HIS B 134 CD2 -0.070 REMARK 500 HIS C 36 NE2 HIS C 36 CD2 -0.075 REMARK 500 HIS C 46 NE2 HIS C 46 CD2 -0.068 REMARK 500 HIS C 134 NE2 HIS C 134 CD2 -0.069 REMARK 500 HIS D 36 NE2 HIS D 36 CD2 -0.077 REMARK 500 HIS D 176 NE2 HIS D 176 CD2 -0.069 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 28 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 THR A 123 N - CA - CB ANGL. DEV. = -12.6 DEGREES REMARK 500 ARG B 28 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 GLU B 129 OE1 - CD - OE2 ANGL. DEV. = -7.4 DEGREES REMARK 500 ASP B 164 CB - CG - OD1 ANGL. DEV. = 7.3 DEGREES REMARK 500 VAL B 214 CG1 - CB - CG2 ANGL. DEV. = -10.6 DEGREES REMARK 500 ILE B 275 CA - C - N ANGL. DEV. = -13.5 DEGREES REMARK 500 ARG C 28 NE - CZ - NH1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG C 28 NE - CZ - NH2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG C 50 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 VAL C 78 CG1 - CB - CG2 ANGL. DEV. = -10.1 DEGREES REMARK 500 ARG C 80 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 MET C 84 CA - CB - CG ANGL. DEV. = 11.0 DEGREES REMARK 500 THR C 123 N - CA - CB ANGL. DEV. = -14.7 DEGREES REMARK 500 ARG C 152 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG C 152 NE - CZ - NH2 ANGL. DEV. = -5.0 DEGREES REMARK 500 ASP C 164 CB - CG - OD1 ANGL. DEV. = 7.4 DEGREES REMARK 500 ARG C 233 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 LEU C 268 CA - CB - CG ANGL. DEV. = 15.3 DEGREES REMARK 500 ARG D 28 NE - CZ - NH1 ANGL. DEV. = 6.4 DEGREES REMARK 500 VAL D 72 CG1 - CB - CG2 ANGL. DEV. = -10.5 DEGREES REMARK 500 ARG D 80 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ARG D 152 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG D 152 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 VAL D 249 CG1 - CB - CG2 ANGL. DEV. = -10.8 DEGREES REMARK 500 ILE D 284 CA - CB - CG1 ANGL. DEV. = -14.9 DEGREES REMARK 500 GLU D 289 CA - CB - CG ANGL. DEV. = 15.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 36 -8.41 59.53 REMARK 500 GLU A 48 38.27 -75.54 REMARK 500 ALA A 177 115.32 -166.11 REMARK 500 LYS A 191 -39.50 -37.55 REMARK 500 VAL A 192 66.54 18.31 REMARK 500 SER A 222 -156.46 -117.24 REMARK 500 ASP A 260 33.55 -88.34 REMARK 500 LYS A 311 49.91 -81.30 REMARK 500 ASN A 312 -59.59 -169.82 REMARK 500 HIS B 36 -3.48 66.90 REMARK 500 GLU B 48 45.78 -72.06 REMARK 500 CYS B 108 59.52 -144.50 REMARK 500 ALA B 177 110.15 -172.31 REMARK 500 LYS B 191 -67.84 -2.48 REMARK 500 VAL B 192 106.98 34.88 REMARK 500 ALA B 220 32.61 -88.33 REMARK 500 SER B 222 -157.61 -108.92 REMARK 500 ASN B 312 13.17 -148.14 REMARK 500 HIS C 36 -8.58 61.25 REMARK 500 GLU C 48 34.11 -74.99 REMARK 500 LYS C 67 106.41 -59.58 REMARK 500 CYS C 108 56.86 -149.06 REMARK 500 LYS C 191 -57.28 -27.71 REMARK 500 VAL C 192 120.14 30.93 REMARK 500 SER C 222 -169.63 -123.05 REMARK 500 LYS C 311 14.60 -68.14 REMARK 500 ASN C 312 -62.53 -124.75 REMARK 500 HIS D 36 -12.77 66.04 REMARK 500 GLU D 48 44.92 -73.17 REMARK 500 PRO D 139 -2.98 -57.33 REMARK 500 ALA D 177 110.84 -173.85 REMARK 500 LYS D 191 -66.64 -9.61 REMARK 500 VAL D 192 105.45 44.16 REMARK 500 SER D 222 -164.94 -120.20 REMARK 500 LYS D 283 96.50 -67.62 REMARK 500 LYS D 311 12.11 -68.47 REMARK 500 ASN D 312 -0.59 -153.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT A 375 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT B 375 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT C 375 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT D 375 DBREF 1MLD A 1 314 UNP P00346 MDHM_PIG 24 337 DBREF 1MLD B 1 314 UNP P00346 MDHM_PIG 24 337 DBREF 1MLD C 1 314 UNP P00346 MDHM_PIG 24 337 DBREF 1MLD D 1 314 UNP P00346 MDHM_PIG 24 337 SEQRES 1 A 314 ALA LYS VAL ALA VAL LEU GLY ALA SER GLY GLY ILE GLY SEQRES 2 A 314 GLN PRO LEU SER LEU LEU LEU LYS ASN SER PRO LEU VAL SEQRES 3 A 314 SER ARG LEU THR LEU TYR ASP ILE ALA HIS THR PRO GLY SEQRES 4 A 314 VAL ALA ALA ASP LEU SER HIS ILE GLU THR ARG ALA THR SEQRES 5 A 314 VAL LYS GLY TYR LEU GLY PRO GLU GLN LEU PRO ASP CYS SEQRES 6 A 314 LEU LYS GLY CYS ASP VAL VAL VAL ILE PRO ALA GLY VAL SEQRES 7 A 314 PRO ARG LYS PRO GLY MET THR ARG ASP ASP LEU PHE ASN SEQRES 8 A 314 THR ASN ALA THR ILE VAL ALA THR LEU THR ALA ALA CYS SEQRES 9 A 314 ALA GLN HIS CYS PRO ASP ALA MET ILE CYS ILE ILE SER SEQRES 10 A 314 ASN PRO VAL ASN SER THR ILE PRO ILE THR ALA GLU VAL SEQRES 11 A 314 PHE LYS LYS HIS GLY VAL TYR ASN PRO ASN LYS ILE PHE SEQRES 12 A 314 GLY VAL THR THR LEU ASP ILE VAL ARG ALA ASN ALA PHE SEQRES 13 A 314 VAL ALA GLU LEU LYS GLY LEU ASP PRO ALA ARG VAL SER SEQRES 14 A 314 VAL PRO VAL ILE GLY GLY HIS ALA GLY LYS THR ILE ILE SEQRES 15 A 314 PRO LEU ILE SER GLN CYS THR PRO LYS VAL ASP PHE PRO SEQRES 16 A 314 GLN ASP GLN LEU SER THR LEU THR GLY ARG ILE GLN GLU SEQRES 17 A 314 ALA GLY THR GLU VAL VAL LYS ALA LYS ALA GLY ALA GLY SEQRES 18 A 314 SER ALA THR LEU SER MET ALA TYR ALA GLY ALA ARG PHE SEQRES 19 A 314 VAL PHE SER LEU VAL ASP ALA MET ASN GLY LYS GLU GLY SEQRES 20 A 314 VAL VAL GLU CYS SER PHE VAL LYS SER GLN GLU THR ASP SEQRES 21 A 314 CYS PRO TYR PHE SER THR PRO LEU LEU LEU GLY LYS LYS SEQRES 22 A 314 GLY ILE GLU LYS ASN LEU GLY ILE GLY LYS ILE SER PRO SEQRES 23 A 314 PHE GLU GLU LYS MET ILE ALA GLU ALA ILE PRO GLU LEU SEQRES 24 A 314 LYS ALA SER ILE LYS LYS GLY GLU GLU PHE VAL LYS ASN SEQRES 25 A 314 MET LYS SEQRES 1 B 314 ALA LYS VAL ALA VAL LEU GLY ALA SER GLY GLY ILE GLY SEQRES 2 B 314 GLN PRO LEU SER LEU LEU LEU LYS ASN SER PRO LEU VAL SEQRES 3 B 314 SER ARG LEU THR LEU TYR ASP ILE ALA HIS THR PRO GLY SEQRES 4 B 314 VAL ALA ALA ASP LEU SER HIS ILE GLU THR ARG ALA THR SEQRES 5 B 314 VAL LYS GLY TYR LEU GLY PRO GLU GLN LEU PRO ASP CYS SEQRES 6 B 314 LEU LYS GLY CYS ASP VAL VAL VAL ILE PRO ALA GLY VAL SEQRES 7 B 314 PRO ARG LYS PRO GLY MET THR ARG ASP ASP LEU PHE ASN SEQRES 8 B 314 THR ASN ALA THR ILE VAL ALA THR LEU THR ALA ALA CYS SEQRES 9 B 314 ALA GLN HIS CYS PRO ASP ALA MET ILE CYS ILE ILE SER SEQRES 10 B 314 ASN PRO VAL ASN SER THR ILE PRO ILE THR ALA GLU VAL SEQRES 11 B 314 PHE LYS LYS HIS GLY VAL TYR ASN PRO ASN LYS ILE PHE SEQRES 12 B 314 GLY VAL THR THR LEU ASP ILE VAL ARG ALA ASN ALA PHE SEQRES 13 B 314 VAL ALA GLU LEU LYS GLY LEU ASP PRO ALA ARG VAL SER SEQRES 14 B 314 VAL PRO VAL ILE GLY GLY HIS ALA GLY LYS THR ILE ILE SEQRES 15 B 314 PRO LEU ILE SER GLN CYS THR PRO LYS VAL ASP PHE PRO SEQRES 16 B 314 GLN ASP GLN LEU SER THR LEU THR GLY ARG ILE GLN GLU SEQRES 17 B 314 ALA GLY THR GLU VAL VAL LYS ALA LYS ALA GLY ALA GLY SEQRES 18 B 314 SER ALA THR LEU SER MET ALA TYR ALA GLY ALA ARG PHE SEQRES 19 B 314 VAL PHE SER LEU VAL ASP ALA MET ASN GLY LYS GLU GLY SEQRES 20 B 314 VAL VAL GLU CYS SER PHE VAL LYS SER GLN GLU THR ASP SEQRES 21 B 314 CYS PRO TYR PHE SER THR PRO LEU LEU LEU GLY LYS LYS SEQRES 22 B 314 GLY ILE GLU LYS ASN LEU GLY ILE GLY LYS ILE SER PRO SEQRES 23 B 314 PHE GLU GLU LYS MET ILE ALA GLU ALA ILE PRO GLU LEU SEQRES 24 B 314 LYS ALA SER ILE LYS LYS GLY GLU GLU PHE VAL LYS ASN SEQRES 25 B 314 MET LYS SEQRES 1 C 314 ALA LYS VAL ALA VAL LEU GLY ALA SER GLY GLY ILE GLY SEQRES 2 C 314 GLN PRO LEU SER LEU LEU LEU LYS ASN SER PRO LEU VAL SEQRES 3 C 314 SER ARG LEU THR LEU TYR ASP ILE ALA HIS THR PRO GLY SEQRES 4 C 314 VAL ALA ALA ASP LEU SER HIS ILE GLU THR ARG ALA THR SEQRES 5 C 314 VAL LYS GLY TYR LEU GLY PRO GLU GLN LEU PRO ASP CYS SEQRES 6 C 314 LEU LYS GLY CYS ASP VAL VAL VAL ILE PRO ALA GLY VAL SEQRES 7 C 314 PRO ARG LYS PRO GLY MET THR ARG ASP ASP LEU PHE ASN SEQRES 8 C 314 THR ASN ALA THR ILE VAL ALA THR LEU THR ALA ALA CYS SEQRES 9 C 314 ALA GLN HIS CYS PRO ASP ALA MET ILE CYS ILE ILE SER SEQRES 10 C 314 ASN PRO VAL ASN SER THR ILE PRO ILE THR ALA GLU VAL SEQRES 11 C 314 PHE LYS LYS HIS GLY VAL TYR ASN PRO ASN LYS ILE PHE SEQRES 12 C 314 GLY VAL THR THR LEU ASP ILE VAL ARG ALA ASN ALA PHE SEQRES 13 C 314 VAL ALA GLU LEU LYS GLY LEU ASP PRO ALA ARG VAL SER SEQRES 14 C 314 VAL PRO VAL ILE GLY GLY HIS ALA GLY LYS THR ILE ILE SEQRES 15 C 314 PRO LEU ILE SER GLN CYS THR PRO LYS VAL ASP PHE PRO SEQRES 16 C 314 GLN ASP GLN LEU SER THR LEU THR GLY ARG ILE GLN GLU SEQRES 17 C 314 ALA GLY THR GLU VAL VAL LYS ALA LYS ALA GLY ALA GLY SEQRES 18 C 314 SER ALA THR LEU SER MET ALA TYR ALA GLY ALA ARG PHE SEQRES 19 C 314 VAL PHE SER LEU VAL ASP ALA MET ASN GLY LYS GLU GLY SEQRES 20 C 314 VAL VAL GLU CYS SER PHE VAL LYS SER GLN GLU THR ASP SEQRES 21 C 314 CYS PRO TYR PHE SER THR PRO LEU LEU LEU GLY LYS LYS SEQRES 22 C 314 GLY ILE GLU LYS ASN LEU GLY ILE GLY LYS ILE SER PRO SEQRES 23 C 314 PHE GLU GLU LYS MET ILE ALA GLU ALA ILE PRO GLU LEU SEQRES 24 C 314 LYS ALA SER ILE LYS LYS GLY GLU GLU PHE VAL LYS ASN SEQRES 25 C 314 MET LYS SEQRES 1 D 314 ALA LYS VAL ALA VAL LEU GLY ALA SER GLY GLY ILE GLY SEQRES 2 D 314 GLN PRO LEU SER LEU LEU LEU LYS ASN SER PRO LEU VAL SEQRES 3 D 314 SER ARG LEU THR LEU TYR ASP ILE ALA HIS THR PRO GLY SEQRES 4 D 314 VAL ALA ALA ASP LEU SER HIS ILE GLU THR ARG ALA THR SEQRES 5 D 314 VAL LYS GLY TYR LEU GLY PRO GLU GLN LEU PRO ASP CYS SEQRES 6 D 314 LEU LYS GLY CYS ASP VAL VAL VAL ILE PRO ALA GLY VAL SEQRES 7 D 314 PRO ARG LYS PRO GLY MET THR ARG ASP ASP LEU PHE ASN SEQRES 8 D 314 THR ASN ALA THR ILE VAL ALA THR LEU THR ALA ALA CYS SEQRES 9 D 314 ALA GLN HIS CYS PRO ASP ALA MET ILE CYS ILE ILE SER SEQRES 10 D 314 ASN PRO VAL ASN SER THR ILE PRO ILE THR ALA GLU VAL SEQRES 11 D 314 PHE LYS LYS HIS GLY VAL TYR ASN PRO ASN LYS ILE PHE SEQRES 12 D 314 GLY VAL THR THR LEU ASP ILE VAL ARG ALA ASN ALA PHE SEQRES 13 D 314 VAL ALA GLU LEU LYS GLY LEU ASP PRO ALA ARG VAL SER SEQRES 14 D 314 VAL PRO VAL ILE GLY GLY HIS ALA GLY LYS THR ILE ILE SEQRES 15 D 314 PRO LEU ILE SER GLN CYS THR PRO LYS VAL ASP PHE PRO SEQRES 16 D 314 GLN ASP GLN LEU SER THR LEU THR GLY ARG ILE GLN GLU SEQRES 17 D 314 ALA GLY THR GLU VAL VAL LYS ALA LYS ALA GLY ALA GLY SEQRES 18 D 314 SER ALA THR LEU SER MET ALA TYR ALA GLY ALA ARG PHE SEQRES 19 D 314 VAL PHE SER LEU VAL ASP ALA MET ASN GLY LYS GLU GLY SEQRES 20 D 314 VAL VAL GLU CYS SER PHE VAL LYS SER GLN GLU THR ASP SEQRES 21 D 314 CYS PRO TYR PHE SER THR PRO LEU LEU LEU GLY LYS LYS SEQRES 22 D 314 GLY ILE GLU LYS ASN LEU GLY ILE GLY LYS ILE SER PRO SEQRES 23 D 314 PHE GLU GLU LYS MET ILE ALA GLU ALA ILE PRO GLU LEU SEQRES 24 D 314 LYS ALA SER ILE LYS LYS GLY GLU GLU PHE VAL LYS ASN SEQRES 25 D 314 MET LYS HET CIT A 375 13 HET CIT B 375 13 HET CIT C 375 13 HET CIT D 375 13 HETNAM CIT CITRIC ACID FORMUL 5 CIT 4(C6 H8 O7) FORMUL 9 HOH *521(H2 O) HELIX 1 H1 ILE A 12 ASN A 22 1 11 HELIX 2 H2 HIS A 36 SER A 45 1 10 HELIX 3 H3 GLN A 61 LYS A 67 1 7 HELIX 4 H4 ASP A 87 ALA A 105 1 19 HELIX 5 H5 PRO A 119 HIS A 134 1 16 HELIX 6 H6 THR A 146 LYS A 161 1 16 HELIX 7 H7 ASP A 164 VAL A 168 1 5 HELIX 8 H8 PRO A 195 ALA A 218 1 24 HELIX 9 H9 THR A 224 ASN A 243 1 20 HELIX 10 H10 SER A 285 LYS A 311 1 27 HELIX 11 H1 ILE B 12 ASN B 22 1 11 HELIX 12 H2 HIS B 36 SER B 45 1 10 HELIX 13 H3 GLN B 61 LYS B 67 1 7 HELIX 14 H4 ASP B 87 ALA B 105 1 19 HELIX 15 H5 PRO B 119 HIS B 134 1 16 HELIX 16 H6 THR B 146 LYS B 161 1 16 HELIX 17 H7 ASP B 164 VAL B 168 1 5 HELIX 18 H8 PRO B 195 ALA B 218 1 24 HELIX 19 H9 THR B 224 ASN B 243 1 20 HELIX 20 H10 SER B 285 LYS B 311 1 27 HELIX 21 H1 ILE C 12 ASN C 22 1 11 HELIX 22 H2 HIS C 36 SER C 45 1 10 HELIX 23 H3 GLN C 61 LYS C 67 1 7 HELIX 24 H4 ASP C 87 ALA C 105 1 19 HELIX 25 H5 PRO C 119 HIS C 134 1 16 HELIX 26 H6 THR C 146 LYS C 161 1 16 HELIX 27 H7 ASP C 164 VAL C 168 1 5 HELIX 28 H8 PRO C 195 ALA C 218 1 24 HELIX 29 H9 THR C 224 ASN C 243 1 20 HELIX 30 H10 SER C 285 LYS C 311 1 27 HELIX 31 H1 ILE D 12 ASN D 22 1 11 HELIX 32 H2 HIS D 36 SER D 45 1 10 HELIX 33 H3 GLN D 61 LYS D 67 1 7 HELIX 34 H4 ASP D 87 ALA D 105 1 19 HELIX 35 H5 PRO D 119 HIS D 134 1 16 HELIX 36 H6 THR D 146 LYS D 161 1 16 HELIX 37 H7 ASP D 164 VAL D 168 1 5 HELIX 38 H8 PRO D 195 ALA D 218 1 24 HELIX 39 H9 THR D 224 ASN D 243 1 20 HELIX 40 H10 SER D 285 LYS D 311 1 27 SHEET 1 S1A 6 ALA A 1 GLY A 7 0 SHEET 2 S1A 6 SER A 27 ASP A 33 1 SHEET 3 S1A 6 THR A 52 GLY A 58 1 SHEET 4 S1A 6 ASP A 70 ILE A 74 -1 SHEET 5 S1A 6 MET A 112 ILE A 115 -1 SHEET 6 S1A 6 LYS A 141 VAL A 145 -1 SHEET 1 S2A 2 PRO A 171 GLY A 175 0 SHEET 2 S2A 2 THR A 180 LEU A 184 -1 SHEET 1 S3A 3 VAL A 248 SER A 256 0 SHEET 2 S3A 3 PRO A 262 GLY A 271 -1 SHEET 3 S3A 3 GLY A 274 LEU A 279 -1 SHEET 1 S1B 6 ALA B 1 GLY B 7 0 SHEET 2 S1B 6 SER B 27 ASP B 33 1 SHEET 3 S1B 6 THR B 52 GLY B 58 1 SHEET 4 S1B 6 ASP B 70 ILE B 74 -1 SHEET 5 S1B 6 MET B 112 ILE B 115 -1 SHEET 6 S1B 6 LYS B 141 VAL B 145 -1 SHEET 1 S2B 2 PRO B 171 GLY B 175 0 SHEET 2 S2B 2 THR B 180 LEU B 184 -1 SHEET 1 S3B 3 VAL B 248 SER B 256 0 SHEET 2 S3B 3 PRO B 262 GLY B 271 -1 SHEET 3 S3B 3 GLY B 274 LEU B 279 -1 SHEET 1 S1C 6 ALA C 1 GLY C 7 0 SHEET 2 S1C 6 SER C 27 ASP C 33 1 SHEET 3 S1C 6 THR C 52 GLY C 58 1 SHEET 4 S1C 6 ASP C 70 ILE C 74 -1 SHEET 5 S1C 6 MET C 112 ILE C 115 -1 SHEET 6 S1C 6 LYS C 141 VAL C 145 -1 SHEET 1 S2C 2 PRO C 171 GLY C 175 0 SHEET 2 S2C 2 THR C 180 LEU C 184 -1 SHEET 1 S3C 3 VAL C 248 SER C 256 0 SHEET 2 S3C 3 PRO C 262 GLY C 271 -1 SHEET 3 S3C 3 GLY C 274 LEU C 279 -1 SHEET 1 S1D 6 ALA D 1 GLY D 7 0 SHEET 2 S1D 6 SER D 27 ASP D 33 1 SHEET 3 S1D 6 THR D 52 GLY D 58 1 SHEET 4 S1D 6 ASP D 70 ILE D 74 -1 SHEET 5 S1D 6 MET D 112 ILE D 115 -1 SHEET 6 S1D 6 LYS D 141 VAL D 145 -1 SHEET 1 S2D 2 PRO D 171 GLY D 175 0 SHEET 2 S2D 2 THR D 180 LEU D 184 -1 SHEET 1 S3D 3 VAL D 248 SER D 256 0 SHEET 2 S3D 3 PRO D 262 GLY D 271 -1 SHEET 3 S3D 3 GLY D 274 LEU D 279 -1 CISPEP 1 ASN A 118 PRO A 119 0 -14.16 CISPEP 2 THR A 189 PRO A 190 0 -7.49 CISPEP 3 ASN B 118 PRO B 119 0 -5.04 CISPEP 4 THR B 189 PRO B 190 0 -15.61 CISPEP 5 ASN C 118 PRO C 119 0 -8.43 CISPEP 6 THR C 189 PRO C 190 0 -3.30 CISPEP 7 ASN D 118 PRO D 119 0 -6.08 CISPEP 8 THR D 189 PRO D 190 0 -14.79 SITE 1 AC1 13 ILE A 12 ARG A 80 ARG A 86 ASN A 118 SITE 2 AC1 13 ARG A 152 HIS A 176 GLY A 210 ALA A 223 SITE 3 AC1 13 HOH A 382 HOH A 384 HOH A 393 HOH A 406 SITE 4 AC1 13 HOH A 409 SITE 1 AC2 15 ILE B 12 ARG B 80 ARG B 86 ASN B 118 SITE 2 AC2 15 LEU B 148 ARG B 152 HIS B 176 GLY B 210 SITE 3 AC2 15 ALA B 223 MET B 227 HOH B 388 HOH B 390 SITE 4 AC2 15 HOH B 398 HOH B 411 HOH B 414 SITE 1 AC3 14 ILE C 12 ARG C 80 ARG C 86 ASN C 118 SITE 2 AC3 14 ARG C 152 HIS C 176 GLY C 210 ALA C 223 SITE 3 AC3 14 MET C 227 HOH C 383 HOH C 385 HOH C 394 SITE 4 AC3 14 HOH C 407 HOH C 410 SITE 1 AC4 12 ILE D 12 ARG D 80 ARG D 86 ASN D 118 SITE 2 AC4 12 ARG D 152 HIS D 176 GLY D 210 HOH D 392 SITE 3 AC4 12 HOH D 394 HOH D 403 HOH D 416 HOH D 419 CRYST1 72.750 146.760 67.580 90.00 108.16 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013746 0.000000 0.004509 0.00000 SCALE2 0.000000 0.006814 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015573 0.00000