PDB Short entry for 1MZT HEADER VIRAL PROTEIN 09-OCT-02 1MZT TITLE NMR STRUCTURE OF THE FD BACTERIOPHAGE PVIII COAT PROTEIN IN LIPID TITLE 2 BILAYER MEMBRANES COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAJOR COAT PROTEIN PVIII; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FILAMENTOUS PHAGE CLONING VECTOR FD-TET SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE FD; SOURCE 3 ORGANISM_TAXID: 10864 KEYWDS FD COAT PROTEIN, MEMBRANE-BOUND, PVIII, VIRAL PROTEIN EXPDTA SOLID-STATE NMR AUTHOR F.M.MARASSI,S.J.OPELLA REVDAT 4 23-FEB-22 1MZT 1 REMARK REVDAT 3 24-FEB-09 1MZT 1 VERSN REVDAT 2 01-MAR-05 1MZT 1 JRNL REVDAT 1 27-NOV-02 1MZT 0 JRNL AUTH F.M.MARASSI,S.J.OPELLA JRNL TITL SIMULTANEOUS ASSIGNMENT AND STRUCTURE DETERMINATION OF A JRNL TITL 2 MEMBRANE PROTEIN FROM NMR ORIENTATIONAL RESTRAINTS JRNL REF PROTEIN SCI. V. 12 403 2003 JRNL REFN ISSN 0961-8368 JRNL PMID 12592011 JRNL DOI 10.1110/PS.0211503 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH F.M.MARASSI,S.J.OPELLA REMARK 1 TITL USING PISA PIES TO RESOLVE AMBIGUITIES IN ANGULAR REMARK 1 TITL 2 CONSTRAINTS FROM PISEMA SPECTRA OF ALIGNED PROTEINS REMARK 1 REF J.BIOMOL.NMR V. 23 239 2002 REMARK 1 REFN ISSN 0925-2738 REMARK 1 DOI 10.1023/A:1019887612018 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CMXW 95, BACKTOR 2 REMARK 3 AUTHORS : CHEMAGNETICS (CMXW), MARASSI, OPELLA (BACKTOR) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURE CALCULATED FROM 40 CHEMICAL REMARK 3 SHIFT AND 40 DIPOLAR COUPLING RESTRAINTS REMARK 4 REMARK 4 1MZT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-OCT-02. REMARK 100 THE DEPOSITION ID IS D_1000017341. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 8 MG 15N-LABELED FD COAT REMARK 210 PROTEIN, 64 MG POPC, 16 MG POPG, REMARK 210 LIPID BILAYERS ORIENTED ON GLASS REMARK 210 SLIDES REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 1H/15N PISEMA REMARK 210 SPECTROMETER FIELD STRENGTH : 400 MHZ REMARK 210 SPECTROMETER MODEL : CMX REMARK 210 SPECTROMETER MANUFACTURER : CHEMAGNETICS REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : FELIX 95, BACKTOR 2 REMARK 210 METHOD USED : CALCULATION OF BOND ORIENTATIONS REMARK 210 AND DIHEDRAL ANGLES FROM SOLID- REMARK 210 STATE NMR RESTRAINTS, FOLLOWED REMARK 210 BY BACK-CALCULATION OF NMR DATA REMARK 210 FROM ORIENTED STRUCTURE REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 6 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED FROM ONE UNIFORMLY AND FOUR REMARK 210 SELECTIVELY 15N-LABELED SAMPLES. REMARK 217 REMARK 217 SOLID STATE NMR STUDY REMARK 217 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLID REMARK 217 STATE NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 217 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 217 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 GLU A 2 REMARK 465 GLY A 3 REMARK 465 ASP A 4 REMARK 465 ASP A 5 REMARK 465 PRO A 6 REMARK 465 THR A 46 REMARK 465 SER A 47 REMARK 465 LYS A 48 REMARK 465 ALA A 49 REMARK 465 SER A 50 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O VAL A 33 H ILE A 37 1.43 REMARK 500 O ALA A 25 H VAL A 29 1.48 REMARK 500 O GLY A 34 H GLY A 38 1.49 REMARK 500 O VAL A 30 H GLY A 34 1.50 REMARK 500 O SER A 17 CA TYR A 24 2.01 REMARK 500 O THR A 36 N LEU A 41 2.12 REMARK 500 O ILE A 37 CA LEU A 41 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 19 -81.76 -93.08 REMARK 500 GLU A 20 132.45 -37.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FDM RELATED DB: PDB REMARK 900 FD MAJOR COAT PROTEIN IN SDS MICELLES, NMR, 20 STRUCTURES REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHOR PROVIDED COORDINATES FOR THE PROTEIN BACKBONE ONLY. DBREF 1MZT A 1 50 UNP P69539 COATB_BPFD 24 73 SEQRES 1 A 50 ALA GLU GLY ASP ASP PRO ALA LYS ALA ALA PHE ASP SER SEQRES 2 A 50 LEU GLN ALA SER ALA THR GLU TYR ILE GLY TYR ALA TRP SEQRES 3 A 50 ALA MET VAL VAL VAL ILE VAL GLY ALA THR ILE GLY ILE SEQRES 4 A 50 LYS LEU PHE LYS LYS PHE THR SER LYS ALA SER HELIX 1 1 ALA A 7 THR A 19 1 13 HELIX 2 2 GLU A 20 PHE A 45 1 26 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000