PDB Short entry for 1NEN HEADER OXIDOREDUCTASE/ELECTRON TRANSPORT 11-DEC-02 1NEN TITLE COMPLEX II (SUCCINATE DEHYDROGENASE) FROM E. COLI WITH TITLE 2 DINITROPHENOL-17 INHIBITOR CO-CRYSTALLIZED AT THE TITLE 3 UBIQUINONE BINDING SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUCCINATE DEHYDROGENASE FLAVOPROTEIN SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 EC: 1.3.99.1, 1.3.5.1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN; COMPND 8 CHAIN: B; COMPND 9 EC: 1.3.99.1, 1.3.5.1; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: SUCCINATE DEHYDROGENASE CYTOCHROME B-556 SUBUNIT; COMPND 13 CHAIN: C; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: SUCCINATE DEHYDROGENASE HYDROPHOBIC MEMBRANE COMPND 17 ANCHOR PROTEIN; COMPND 18 CHAIN: D; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: SDHA OR B0723 OR Z0877 OR ECS0748; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PFAS; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 11 ORGANISM_TAXID: 562; SOURCE 12 GENE: SDHB OR B0724; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PFAS; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 19 ORGANISM_TAXID: 562; SOURCE 20 GENE: SDHC OR CYBA OR B0721 OR Z0875 OR ECS0746; SOURCE 21 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 23 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 24 EXPRESSION_SYSTEM_PLASMID: PFAS; SOURCE 25 MOL_ID: 4; SOURCE 26 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 27 ORGANISM_TAXID: 562; SOURCE 28 GENE: SDHD OR B0722; SOURCE 29 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 30 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 31 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 32 EXPRESSION_SYSTEM_PLASMID: PFAS KEYWDS MEMBRANE PROTEIN, RESPIRATORY COMPLEX, KEYWDS 2 OXIDOREDUCTASE/ELECTRON TRANSPORT COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR V.YANKOVSKAYA,R.HORSEFIELD,S.TORNROTH,C.LUNA-CHAVEZ, AUTHOR 2 H.MIYOSHI,C.LEGER,B.BYRNE,G.CECCHINI,S.IWATA REVDAT 4 31-MAR-09 1NEN 1 ATOM CONECT REVDAT 3 24-FEB-09 1NEN 1 VERSN REVDAT 2 02-AUG-05 1NEN 1 HEADER COMPND TITLE REMARK REVDAT 1 25-FEB-03 1NEN 0 JRNL AUTH V.YANKOVSKAYA,R.HORSEFIELD,S.TORNROTH, JRNL AUTH 2 C.LUNA-CHAVEZ,H.MIYOSHI,C.LEGER,B.BYRNE,G.CECCHINI, JRNL AUTH 3 S.IWATA JRNL TITL ARCHITECTURE OF SUCCINATE DEHYDROGENASE AND JRNL TITL 2 REACTIVE OXYGEN SPECIES GENERATION JRNL REF SCIENCE V. 299 700 2003 JRNL REFN ISSN 0036-8075 JRNL PMID 12560550 JRNL DOI 10.1126/SCIENCE.1079605 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 41793 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.271 REMARK 3 FREE R VALUE : 0.296 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1253 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8297 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 258 REMARK 3 SOLVENT ATOMS : 140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.40 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.00 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1NEN COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-FEB-03. REMARK 100 THE RCSB ID CODE IS RCSB017808. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUL-02 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9150 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42735 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.42800 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS-HCL, CACL2, PEG 400, BACL2, REMARK 280 ETHYLENE GLYCOL, DNP17, PH 8.2, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 69.40000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 40.06811 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 173.96667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 69.40000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 40.06811 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 173.96667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 69.40000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 40.06811 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 173.96667 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 69.40000 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 40.06811 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 173.96667 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 69.40000 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 40.06811 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 173.96667 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 69.40000 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 40.06811 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 173.96667 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 80.13622 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 347.93333 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 80.13622 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 347.93333 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 80.13622 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 347.93333 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 80.13622 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 347.93333 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 80.13622 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 347.93333 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 80.13622 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 347.93333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -193.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 65500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 111780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -625.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 208.20000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 120.20433 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 240.40865 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 40130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 78060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -402.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 160.27243 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 173.96667 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET D 1 REMARK 465 VAL D 2 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 ASP A 110 REMARK 475 ASP A 111 REMARK 475 GLY A 112 REMARK 475 ARG A 113 REMARK 475 ILE A 114 REMARK 475 TYR A 115 REMARK 475 GLN A 116 REMARK 475 GLU A 564 REMARK 475 SER A 565 REMARK 475 MET A 566 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER A 563 CA C O CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 77 NH1 ARG A 586 2.19 REMARK 500 NH2 ARG A 446 O ALA A 497 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 50 -89.72 -117.24 REMARK 500 ASP A 77 35.45 96.73 REMARK 500 PRO A 105 54.02 -60.12 REMARK 500 ASP A 110 -98.62 163.07 REMARK 500 GLN A 116 121.36 -179.71 REMARK 500 PRO A 118 170.74 -56.53 REMARK 500 PHE A 119 10.55 -39.42 REMARK 500 ALA A 138 -162.54 55.59 REMARK 500 ARG A 140 44.13 -107.54 REMARK 500 LEU A 167 -83.83 -88.06 REMARK 500 ALA A 201 58.92 -146.92 REMARK 500 ALA A 205 57.28 -151.48 REMARK 500 ARG A 207 2.04 -67.03 REMARK 500 ASN A 218 79.49 -62.91 REMARK 500 THR A 244 42.01 -108.71 REMARK 500 ALA A 277 58.96 -116.96 REMARK 500 PRO A 278 -28.03 -19.95 REMARK 500 LYS A 281 -152.73 60.68 REMARK 500 ALA A 284 152.25 -49.84 REMARK 500 PRO A 309 97.09 -47.97 REMARK 500 ASP A 316 -35.15 -37.91 REMARK 500 PRO A 348 76.69 -62.05 REMARK 500 HIS A 354 -103.27 -142.90 REMARK 500 SER A 393 45.99 82.53 REMARK 500 ASN A 398 114.22 -163.53 REMARK 500 ASP A 431 -179.18 -65.21 REMARK 500 ALA A 479 -72.76 -59.95 REMARK 500 GLU A 505 93.69 -57.20 REMARK 500 PHE A 506 84.62 52.79 REMARK 500 THR A 534 51.93 -95.93 REMARK 500 LEU A 554 67.19 -102.73 REMARK 500 GLU A 562 30.14 -160.84 REMARK 500 SER A 563 -118.20 72.93 REMARK 500 SER A 570 -156.87 -125.60 REMARK 500 GLU A 574 69.72 -152.97 REMARK 500 LEU A 577 -158.35 -162.32 REMARK 500 ARG A 578 -81.23 -94.76 REMARK 500 PRO A 579 -4.98 -59.91 REMARK 500 ALA A 580 157.56 81.54 REMARK 500 PHE A 581 125.92 -174.86 REMARK 500 PRO A 583 -175.35 -66.97 REMARK 500 LYS A 584 -161.42 172.84 REMARK 500 ARG A 586 79.75 -117.07 REMARK 500 TYR B 10 131.38 -174.19 REMARK 500 PRO B 12 -33.79 -37.38 REMARK 500 SER B 54 -102.91 -165.21 REMARK 500 CYS B 55 -28.14 -39.40 REMARK 500 ARG B 56 -0.89 65.34 REMARK 500 PRO B 85 132.03 -39.54 REMARK 500 ARG B 101 140.36 -179.26 REMARK 500 ASP B 102 -123.94 44.64 REMARK 500 LYS B 118 62.44 60.49 REMARK 500 PRO B 119 25.58 -56.17 REMARK 500 ASN B 124 -12.87 -46.32 REMARK 500 ASN B 127 62.23 70.24 REMARK 500 ARG B 131 -102.09 -116.67 REMARK 500 ASP B 199 -172.55 -63.46 REMARK 500 SER B 202 -59.40 -24.35 REMARK 500 PHE B 204 5.22 -66.96 REMARK 500 ILE C 2 -162.99 -75.78 REMARK 500 LYS C 7 113.78 42.45 REMARK 500 LEU C 13 28.81 -146.48 REMARK 500 PHE C 96 -72.06 -65.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 THE HET GROUP CDN WAS NAMED CARDIOLIPIN REMARK 600 WHICH IS A GENERIC NAME FOR THIS TYPE OF REMARK 600 LIPID. THE 4 TAILS OF THE MOLECULE ARE REMARK 600 DISORDERED IN THE STRUCTURE AND THEIR REMARK 600 EXACT LENGTH CAN NOT ASCERTAINED MAKING REMARK 600 IT DIFFICULT TO ASSIGN AN EXACT NAME. REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 EPH C 309 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM C 305 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 84 NE2 REMARK 620 2 HIS D 71 NE2 174.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 590 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 355 OH REMARK 620 2 MET A 357 O 137.4 REMARK 620 3 ALA A 390 O 109.4 105.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 311 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 187 O REMARK 620 2 THR B 190 OG1 80.3 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OAA A 589 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 590 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 311 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 601 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FES B 302 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SF4 B 303 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE F3S B 304 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM C 305 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DNT C 306 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CDN C 308 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPH C 309 DBREF 1NEN A 1 588 UNP P0AC41 DHSA_ECOLI 1 588 DBREF 1NEN B 1 238 UNP P07014 DHSB_ECOLI 1 238 DBREF 1NEN C 1 129 UNP P69054 DHSC_ECOLI 1 129 DBREF 1NEN D 1 115 UNP P0AC44 DHSD_ECOLI 1 115 SEQRES 1 A 588 MET LYS LEU PRO VAL ARG GLU PHE ASP ALA VAL VAL ILE SEQRES 2 A 588 GLY ALA GLY GLY ALA GLY MET ARG ALA ALA LEU GLN ILE SEQRES 3 A 588 SER GLN SER GLY GLN THR CYS ALA LEU LEU SER LYS VAL SEQRES 4 A 588 PHE PRO THR ARG SER HIS THR VAL SER ALA GLN GLY GLY SEQRES 5 A 588 ILE THR VAL ALA LEU GLY ASN THR HIS GLU ASP ASN TRP SEQRES 6 A 588 GLU TRP HIS MET TYR ASP THR VAL LYS GLY SER ASP TYR SEQRES 7 A 588 ILE GLY ASP GLN ASP ALA ILE GLU TYR MET CYS LYS THR SEQRES 8 A 588 GLY PRO GLU ALA ILE LEU GLU LEU GLU HIS MET GLY LEU SEQRES 9 A 588 PRO PHE SER ARG LEU ASP ASP GLY ARG ILE TYR GLN ARG SEQRES 10 A 588 PRO PHE GLY GLY GLN SER LYS ASN PHE GLY GLY GLU GLN SEQRES 11 A 588 ALA ALA ARG THR ALA ALA ALA ALA ASP ARG THR GLY HIS SEQRES 12 A 588 ALA LEU LEU HIS THR LEU TYR GLN GLN ASN LEU LYS ASN SEQRES 13 A 588 HIS THR THR ILE PHE SER GLU TRP TYR ALA LEU ASP LEU SEQRES 14 A 588 VAL LYS ASN GLN ASP GLY ALA VAL VAL GLY CYS THR ALA SEQRES 15 A 588 LEU CYS ILE GLU THR GLY GLU VAL VAL TYR PHE LYS ALA SEQRES 16 A 588 ARG ALA THR VAL LEU ALA THR GLY GLY ALA GLY ARG ILE SEQRES 17 A 588 TYR GLN SER THR THR ASN ALA HIS ILE ASN THR GLY ASP SEQRES 18 A 588 GLY VAL GLY MET ALA ILE ARG ALA GLY VAL PRO VAL GLN SEQRES 19 A 588 ASP MET GLU MET TRP GLN PHE HIS PRO THR GLY ILE ALA SEQRES 20 A 588 GLY ALA GLY VAL LEU VAL THR GLU GLY CYS ARG GLY GLU SEQRES 21 A 588 GLY GLY TYR LEU LEU ASN LYS HIS GLY GLU ARG PHE MET SEQRES 22 A 588 GLU ARG TYR ALA PRO ASN ALA LYS ASP LEU ALA GLY ARG SEQRES 23 A 588 ASP VAL VAL ALA ARG SER ILE MET ILE GLU ILE ARG GLU SEQRES 24 A 588 GLY ARG GLY CYS ASP GLY PRO TRP GLY PRO HIS ALA LYS SEQRES 25 A 588 LEU LYS LEU ASP HIS LEU GLY LYS GLU VAL LEU GLU SER SEQRES 26 A 588 ARG LEU PRO GLY ILE LEU GLU LEU SER ARG THR PHE ALA SEQRES 27 A 588 HIS VAL ASP PRO VAL LYS GLU PRO ILE PRO VAL ILE PRO SEQRES 28 A 588 THR CYS HIS TYR MET MET GLY GLY ILE PRO THR LYS VAL SEQRES 29 A 588 THR GLY GLN ALA LEU THR VAL ASN GLU LYS GLY GLU ASP SEQRES 30 A 588 VAL VAL VAL PRO GLY LEU PHE ALA VAL GLY GLU ILE ALA SEQRES 31 A 588 CYS VAL SER VAL HIS GLY ALA ASN ARG LEU GLY GLY ASN SEQRES 32 A 588 SER LEU LEU ASP LEU VAL VAL PHE GLY ARG ALA ALA GLY SEQRES 33 A 588 LEU HIS LEU GLN GLU SER ILE ALA GLU GLN GLY ALA LEU SEQRES 34 A 588 ARG ASP ALA SER GLU SER ASP VAL GLU ALA SER LEU ASP SEQRES 35 A 588 ARG LEU ASN ARG TRP ASN ASN ASN ARG ASN GLY GLU ASP SEQRES 36 A 588 PRO VAL ALA ILE ARG LYS ALA LEU GLN GLU CYS MET GLN SEQRES 37 A 588 HIS ASN PHE SER VAL PHE ARG GLU GLY ASP ALA MET ALA SEQRES 38 A 588 LYS GLY LEU GLU GLN LEU LYS VAL ILE ARG GLU ARG LEU SEQRES 39 A 588 LYS ASN ALA ARG LEU ASP ASP THR SER SER GLU PHE ASN SEQRES 40 A 588 THR GLN ARG VAL GLU CYS LEU GLU LEU ASP ASN LEU MET SEQRES 41 A 588 GLU THR ALA TYR ALA THR ALA VAL SER ALA ASN PHE ARG SEQRES 42 A 588 THR GLU SER ARG GLY ALA HIS SER ARG PHE ASP PHE PRO SEQRES 43 A 588 ASP ARG ASP ASP GLU ASN TRP LEU CYS HIS SER LEU TYR SEQRES 44 A 588 LEU PRO GLU SER GLU SER MET THR ARG ARG SER VAL ASN SEQRES 45 A 588 MET GLU PRO LYS LEU ARG PRO ALA PHE PRO PRO LYS ILE SEQRES 46 A 588 ARG THR TYR SEQRES 1 B 238 MET ARG LEU GLU PHE SER ILE TYR ARG TYR ASN PRO ASP SEQRES 2 B 238 VAL ASP ASP ALA PRO ARG MET GLN ASP TYR THR LEU GLU SEQRES 3 B 238 ALA ASP GLU GLY ARG ASP MET MET LEU LEU ASP ALA LEU SEQRES 4 B 238 ILE GLN LEU LYS GLU LYS ASP PRO SER LEU SER PHE ARG SEQRES 5 B 238 ARG SER CYS ARG GLU GLY VAL CYS GLY SER ASP GLY LEU SEQRES 6 B 238 ASN MET ASN GLY LYS ASN GLY LEU ALA CYS ILE THR PRO SEQRES 7 B 238 ILE SER ALA LEU ASN GLN PRO GLY LYS LYS ILE VAL ILE SEQRES 8 B 238 ARG PRO LEU PRO GLY LEU PRO VAL ILE ARG ASP LEU VAL SEQRES 9 B 238 VAL ASP MET GLY GLN PHE TYR ALA GLN TYR GLU LYS ILE SEQRES 10 B 238 LYS PRO TYR LEU LEU ASN ASN GLY GLN ASN PRO PRO ALA SEQRES 11 B 238 ARG GLU HIS LEU GLN MET PRO GLU GLN ARG GLU LYS LEU SEQRES 12 B 238 ASP GLY LEU TYR GLU CYS ILE LEU CYS ALA CYS CYS SER SEQRES 13 B 238 THR SER CYS PRO SER PHE TRP TRP ASN PRO ASP LYS PHE SEQRES 14 B 238 ILE GLY PRO ALA GLY LEU LEU ALA ALA TYR ARG PHE LEU SEQRES 15 B 238 ILE ASP SER ARG ASP THR GLU THR ASP SER ARG LEU ASP SEQRES 16 B 238 GLY LEU SER ASP ALA PHE SER VAL PHE ARG CYS HIS SER SEQRES 17 B 238 ILE MET ASN CYS VAL SER VAL CYS PRO LYS GLY LEU ASN SEQRES 18 B 238 PRO THR ARG ALA ILE GLY HIS ILE LYS SER MET LEU LEU SEQRES 19 B 238 GLN ARG ASN ALA SEQRES 1 C 129 MET ILE ARG ASN VAL LYS LYS GLN ARG PRO VAL ASN LEU SEQRES 2 C 129 ASP LEU GLN THR ILE ARG PHE PRO ILE THR ALA ILE ALA SEQRES 3 C 129 SER ILE LEU HIS ARG VAL SER GLY VAL ILE THR PHE VAL SEQRES 4 C 129 ALA VAL GLY ILE LEU LEU TRP LEU LEU GLY THR SER LEU SEQRES 5 C 129 SER SER PRO GLU GLY PHE GLU GLN ALA SER ALA ILE MET SEQRES 6 C 129 GLY SER PHE PHE VAL LYS PHE ILE MET TRP GLY ILE LEU SEQRES 7 C 129 THR ALA LEU ALA TYR HIS VAL VAL VAL GLY ILE ARG HIS SEQRES 8 C 129 MET MET MET ASP PHE GLY TYR LEU GLU GLU THR PHE GLU SEQRES 9 C 129 ALA GLY LYS ARG SER ALA LYS ILE SER PHE VAL ILE THR SEQRES 10 C 129 VAL VAL LEU SER LEU LEU ALA GLY VAL LEU VAL TRP SEQRES 1 D 115 MET VAL SER ASN ALA SER ALA LEU GLY ARG ASN GLY VAL SEQRES 2 D 115 HIS ASP PHE ILE LEU VAL ARG ALA THR ALA ILE VAL LEU SEQRES 3 D 115 THR LEU TYR ILE ILE TYR MET VAL GLY PHE PHE ALA THR SEQRES 4 D 115 SER GLY GLU LEU THR TYR GLU VAL TRP ILE GLY PHE PHE SEQRES 5 D 115 ALA SER ALA PHE THR LYS VAL PHE THR LEU LEU ALA LEU SEQRES 6 D 115 PHE SER ILE LEU ILE HIS ALA TRP ILE GLY MET TRP GLN SEQRES 7 D 115 VAL LEU THR ASP TYR VAL LYS PRO LEU ALA LEU ARG LEU SEQRES 8 D 115 MET LEU GLN LEU VAL ILE VAL VAL ALA LEU VAL VAL TYR SEQRES 9 D 115 VAL ILE TYR GLY PHE VAL VAL VAL TRP GLY VAL HET OAA A 589 9 HET CA A 590 1 HET CA B 311 1 HET FAD A 601 53 HET FES B 302 4 HET SF4 B 303 8 HET F3S B 304 7 HET HEM C 305 43 HET DNT C 306 20 HET CDN C 308 77 HET EPH C 309 35 HETNAM OAA OXALOACETATE ION HETNAM CA CALCIUM ION HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM FES FE2/S2 (INORGANIC) CLUSTER HETNAM SF4 IRON/SULFUR CLUSTER HETNAM F3S FE3-S4 CLUSTER HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM DNT 2-[1-METHYLHEXYL]-4,6-DINITROPHENOL HETNAM CDN CARDIOLIPIN HETNAM EPH L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL- HETNAM 2 EPH PHOSPHATIDYLETHANOLAMINE HETSYN HEM HEME FORMUL 5 OAA C4 H3 O5 1- FORMUL 6 CA 2(CA 2+) FORMUL 8 FAD C27 H33 N9 O15 P2 FORMUL 9 FES FE2 S2 FORMUL 10 SF4 FE4 S4 FORMUL 11 F3S FE3 S4 FORMUL 12 HEM C34 H32 FE N4 O4 FORMUL 13 DNT C13 H18 N2 O5 FORMUL 14 CDN C58 H120 O17 P2 FORMUL 15 EPH C39 H68 N O8 P FORMUL 16 HOH *140(H2 O) HELIX 1 1 GLY A 16 SER A 29 1 14 HELIX 2 2 PHE A 40 ALA A 49 5 10 HELIX 3 3 ASN A 64 ASP A 77 1 14 HELIX 4 4 ASP A 81 MET A 102 1 22 HELIX 5 5 ARG A 140 ASN A 156 1 17 HELIX 6 6 ALA A 205 TYR A 209 5 5 HELIX 7 7 GLY A 220 ARG A 228 1 9 HELIX 8 8 GLU A 255 GLU A 260 1 6 HELIX 9 9 ARG A 271 ALA A 277 1 7 HELIX 10 10 ALA A 280 ALA A 284 5 5 HELIX 11 11 GLY A 285 GLU A 299 1 15 HELIX 12 12 GLY A 319 LEU A 327 1 9 HELIX 13 13 LEU A 327 HIS A 339 1 13 HELIX 14 14 GLY A 402 GLY A 427 1 26 HELIX 15 15 SER A 433 LEU A 441 1 9 HELIX 16 16 LEU A 441 ASN A 450 1 10 HELIX 17 17 ASP A 455 PHE A 471 1 17 HELIX 18 18 GLU A 476 LEU A 494 1 19 HELIX 19 19 LYS A 495 ALA A 497 5 3 HELIX 20 20 ASN A 507 ARG A 533 1 27 HELIX 21 21 MET B 34 ASP B 46 1 13 HELIX 22 22 MET B 107 ILE B 117 1 11 HELIX 23 23 MET B 136 LYS B 142 1 7 HELIX 24 24 ALA B 153 SER B 158 1 6 HELIX 25 25 CYS B 159 ASN B 165 1 7 HELIX 26 26 GLY B 171 ILE B 183 1 13 HELIX 27 27 GLU B 189 LEU B 197 1 9 HELIX 28 28 MET B 210 CYS B 216 1 7 HELIX 29 29 ASN B 221 ASN B 237 1 17 HELIX 30 30 ASP C 14 ILE C 18 5 5 HELIX 31 31 PRO C 21 SER C 54 1 34 HELIX 32 32 SER C 54 MET C 65 1 12 HELIX 33 33 SER C 67 GLY C 97 1 31 HELIX 34 34 THR C 102 TRP C 129 1 28 HELIX 35 35 ASN D 11 ALA D 38 1 28 HELIX 36 36 THR D 44 ALA D 53 1 10 HELIX 37 37 SER D 54 VAL D 84 1 31 HELIX 38 38 PRO D 86 GLY D 114 1 29 SHEET 1 A 4 VAL A 5 PHE A 8 0 SHEET 2 A 4 VAL A 190 ALA A 195 1 O TYR A 192 N ARG A 6 SHEET 3 A 4 VAL A 177 CYS A 184 -1 N CYS A 180 O PHE A 193 SHEET 4 A 4 TRP A 164 LYS A 171 -1 N TYR A 165 O LEU A 183 SHEET 1 B 6 THR A 159 PHE A 161 0 SHEET 2 B 6 ALA A 34 LEU A 36 1 N LEU A 35 O PHE A 161 SHEET 3 B 6 VAL A 11 ILE A 13 1 N VAL A 12 O LEU A 36 SHEET 4 B 6 THR A 198 LEU A 200 1 O VAL A 199 N ILE A 13 SHEET 5 B 6 ASP A 377 ALA A 385 1 O PHE A 384 N LEU A 200 SHEET 6 B 6 GLN A 367 VAL A 371 -1 N THR A 370 O VAL A 378 SHEET 1 C 3 ILE A 53 THR A 54 0 SHEET 2 C 3 THR A 134 ALA A 135 -1 O ALA A 135 N ILE A 53 SHEET 3 C 3 SER A 123 LYS A 124 -1 N LYS A 124 O THR A 134 SHEET 1 D 3 VAL A 233 GLN A 234 0 SHEET 2 D 3 LEU A 558 TYR A 559 -1 O TYR A 559 N VAL A 233 SHEET 3 D 3 ARG A 569 SER A 570 -1 O SER A 570 N LEU A 558 SHEET 1 E 4 TRP A 239 ILE A 246 0 SHEET 2 E 4 ILE A 347 MET A 356 -1 O ILE A 350 N GLY A 245 SHEET 3 E 4 ALA A 311 LYS A 314 -1 N ALA A 311 O VAL A 349 SHEET 4 E 4 TYR A 263 LEU A 265 -1 N TYR A 263 O LYS A 314 SHEET 1 F 2 ILE A 360 PRO A 361 0 SHEET 2 F 2 ALA A 390 CYS A 391 1 O CYS A 391 N ILE A 360 SHEET 1 G 2 PHE A 474 ARG A 475 0 SHEET 2 G 2 SER A 541 ARG A 542 1 O SER A 541 N ARG A 475 SHEET 1 H 5 ARG B 19 THR B 24 0 SHEET 2 H 5 GLU B 4 ARG B 9 -1 N PHE B 5 O TYR B 23 SHEET 3 H 5 ILE B 89 ARG B 92 1 O ILE B 91 N SER B 6 SHEET 4 H 5 GLY B 64 MET B 67 -1 N ASN B 66 O ARG B 92 SHEET 5 H 5 LYS B 70 LEU B 73 -1 O LYS B 70 N MET B 67 SHEET 1 I 2 VAL B 99 ARG B 101 0 SHEET 2 I 2 VAL B 104 VAL B 105 -1 O VAL B 104 N ARG B 101 LINK FE1 FES B 302 SG CYS B 75 1555 1555 2.27 LINK FE1 FES B 302 OD1 ASP B 63 1555 1555 2.11 LINK FE2 FES B 302 SG CYS B 60 1555 1555 2.24 LINK FE2 FES B 302 SG CYS B 55 1555 1555 2.25 LINK FE1 SF4 B 303 SG CYS B 155 1555 1555 2.25 LINK FE2 SF4 B 303 SG CYS B 149 1555 1555 2.24 LINK FE3 SF4 B 303 SG CYS B 216 1555 1555 2.25 LINK FE4 SF4 B 303 SG CYS B 152 1555 1555 2.24 LINK FE1 F3S B 304 SG CYS B 206 1555 1555 2.21 LINK FE3 F3S B 304 SG CYS B 212 1555 1555 2.26 LINK FE4 F3S B 304 SG CYS B 159 1555 1555 2.25 LINK NE2 HIS A 45 C8M FAD A 601 1555 1555 1.37 LINK FE HEM C 305 NE2 HIS C 84 1555 1555 2.15 LINK FE HEM C 305 NE2 HIS D 71 1555 1555 2.21 LINK OH TYR A 355 CA CA A 590 1555 1555 3.09 LINK O MET A 357 CA CA A 590 1555 1555 2.89 LINK O ALA A 390 CA CA A 590 1555 1555 2.85 LINK O ASP B 187 CA CA B 311 1555 1555 2.93 LINK OG1 THR B 190 CA CA B 311 1555 1555 3.11 LINK OD2 ASP B 63 FE1 FES B 302 1555 1555 2.59 SITE 1 AC1 11 GLY A 51 PHE A 126 HIS A 242 THR A 254 SITE 2 AC1 11 GLU A 255 ARG A 286 HIS A 354 ARG A 399 SITE 3 AC1 11 GLY A 401 GLY A 402 FAD A 601 SITE 1 AC2 5 TYR A 355 MET A 356 MET A 357 GLU A 388 SITE 2 AC2 5 ALA A 390 SITE 1 AC3 2 ASP B 187 THR B 190 SITE 1 AC4 37 GLY A 14 ALA A 15 GLY A 16 GLY A 17 SITE 2 AC4 37 ALA A 18 SER A 37 LYS A 38 SER A 44 SITE 3 AC4 37 HIS A 45 THR A 46 SER A 48 ALA A 49 SITE 4 AC4 37 GLN A 50 GLY A 51 GLY A 52 TRP A 164 SITE 5 AC4 37 TYR A 165 ALA A 166 ALA A 201 THR A 202 SITE 6 AC4 37 GLY A 203 THR A 213 ASN A 214 ASP A 221 SITE 7 AC4 37 LEU A 252 HIS A 354 TYR A 355 GLY A 387 SITE 8 AC4 37 GLU A 388 ARG A 399 GLY A 402 ASN A 403 SITE 9 AC4 37 SER A 404 LEU A 405 LEU A 408 OAA A 589 SITE 10 AC4 37 HOH A 617 SITE 1 AC5 9 SER B 54 CYS B 55 ARG B 56 GLY B 58 SITE 2 AC5 9 VAL B 59 CYS B 60 GLY B 61 ASP B 63 SITE 3 AC5 9 CYS B 75 SITE 1 AC6 8 CYS B 149 ILE B 150 CYS B 152 ALA B 153 SITE 2 AC6 8 CYS B 155 LEU B 176 CYS B 216 LEU B 220 SITE 1 AC7 10 CYS B 159 PRO B 172 CYS B 206 HIS B 207 SITE 2 AC7 10 SER B 208 ILE B 209 MET B 210 ASN B 211 SITE 3 AC7 10 CYS B 212 THR B 223 SITE 1 AC8 20 HIS B 207 HIS C 30 ARG C 31 THR C 37 SITE 2 AC8 20 PHE C 38 HIS C 84 VAL C 85 GLY C 88 SITE 3 AC8 20 ILE C 89 HIS C 91 CDN C 308 HOH C 311 SITE 4 AC8 20 ALA D 23 LEU D 26 THR D 27 ILE D 68 SITE 5 AC8 20 HIS D 71 GLY D 75 MET D 76 GLN D 78 SITE 1 AC9 12 PRO B 160 TRP B 163 TRP B 164 HIS B 207 SITE 2 AC9 12 ILE B 209 LEU C 15 PHE C 20 ALA C 24 SITE 3 AC9 12 SER C 27 ILE C 28 ARG C 31 TYR D 83 SITE 1 BC1 21 SER C 51 ALA C 61 SER C 62 MET C 65 SITE 2 BC1 21 LEU C 78 ALA C 82 VAL C 115 LEU C 123 SITE 3 BC1 21 VAL C 126 LEU C 127 TRP C 129 HEM C 305 SITE 4 BC1 21 EPH C 309 TYR D 29 ILE D 30 PHE D 37 SITE 5 BC1 21 GLY D 41 LEU D 43 TRP D 48 ILE D 68 SITE 6 BC1 21 HOH D 124 SITE 1 BC2 5 LYS C 107 LYS C 111 PHE C 114 TRP C 129 SITE 2 BC2 5 CDN C 308 CRYST1 138.800 138.800 521.900 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007205 0.004160 0.000000 0.00000 SCALE2 0.000000 0.008319 0.000000 0.00000 SCALE3 0.000000 0.000000 0.001916 0.00000