PDB Short entry for 1NH8 HEADER TRANSFERASE 18-DEC-02 1NH8 TITLE ATP PHOSPHORIBOSYLTRANSFERASE (ATP-PRTASE) FROM MYCOBACTERIUM TITLE 2 TUBERCULOSIS IN COMPLEX WITH AMP AND HISTIDINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP PHOSPHORIBOSYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.4.2.17; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET2A KEYWDS PRTASE, DE NOVO HIS BIOSYNTHESIS, PRPP, TRANSFERASE, KEYWDS 2 PHOSPHORIBOSYLTRANSFERASE, STRUCTURAL GENOMICS, PSI, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, TB STRUCTURAL GENOMICS CONSORTIUM, TBSGC EXPDTA X-RAY DIFFRACTION AUTHOR Y.CHO,V.SHARMA,J.C.SACCHETTINI,TB STRUCTURAL GENOMICS CONSORTIUM AUTHOR 2 (TBSGC) REVDAT 5 13-JUL-11 1NH8 1 VERSN REVDAT 4 24-FEB-09 1NH8 1 VERSN REVDAT 3 01-FEB-05 1NH8 1 AUTHOR KEYWDS REMARK REVDAT 2 25-FEB-03 1NH8 1 JRNL REVDAT 1 11-FEB-03 1NH8 0 JRNL AUTH Y.CHO,V.SHARMA,J.C.SACCHETTINI JRNL TITL CRYSTAL STRUCTURE OF ATP PHOSPHORIBOSYLTRANSFERASE FROM JRNL TITL 2 MYCOBACTERIUM TUBERCULOSIS JRNL REF J.BIOL.CHEM. V. 278 8333 2003 JRNL REFN ISSN 0021-9258 JRNL PMID 12511575 JRNL DOI 10.1074/JBC.M212124200 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 25850 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1366 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1840 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1770 REMARK 3 BIN FREE R VALUE SET COUNT : 92 REMARK 3 BIN FREE R VALUE : 0.2290 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2087 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 236 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.19000 REMARK 3 B22 (A**2) : -0.19000 REMARK 3 B33 (A**2) : 0.29000 REMARK 3 B12 (A**2) : -0.10000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.138 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.131 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.086 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.698 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2176 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2957 ; 1.585 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 274 ; 4.505 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 382 ;17.973 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 345 ; 0.109 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1624 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 998 ; 0.241 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 257 ; 0.191 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 75 ; 0.186 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 19 ; 0.226 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1377 ; 0.815 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2208 ; 1.440 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 799 ; 2.536 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 749 ; 4.035 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 90 REMARK 3 RESIDUE RANGE : A 178 A 185 REMARK 3 RESIDUE RANGE : A 194 A 210 REMARK 3 RESIDUE RANGE : A 279 A 284 REMARK 3 ORIGIN FOR THE GROUP (A): 37.4760 26.5360 61.5390 REMARK 3 T TENSOR REMARK 3 T11: 0.0394 T22: 0.0312 REMARK 3 T33: 0.0647 T12: 0.0121 REMARK 3 T13: -0.0115 T23: -0.0199 REMARK 3 L TENSOR REMARK 3 L11: 2.6176 L22: 1.9778 REMARK 3 L33: 4.5772 L12: 0.1599 REMARK 3 L13: 2.4074 L23: 0.1579 REMARK 3 S TENSOR REMARK 3 S11: 0.0953 S12: 0.0371 S13: -0.2437 REMARK 3 S21: -0.0363 S22: 0.0817 S23: -0.0967 REMARK 3 S31: 0.2393 S32: 0.0695 S33: -0.1770 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 91 A 177 REMARK 3 ORIGIN FOR THE GROUP (A): 27.5880 48.1870 45.7540 REMARK 3 T TENSOR REMARK 3 T11: 0.0344 T22: 0.0418 REMARK 3 T33: 0.0309 T12: 0.0147 REMARK 3 T13: 0.0103 T23: -0.0220 REMARK 3 L TENSOR REMARK 3 L11: 3.0778 L22: 4.1230 REMARK 3 L33: 3.9781 L12: -0.2145 REMARK 3 L13: -1.0496 L23: -0.5679 REMARK 3 S TENSOR REMARK 3 S11: 0.0857 S12: -0.1091 S13: 0.1030 REMARK 3 S21: -0.0054 S22: -0.0098 S23: -0.2935 REMARK 3 S31: -0.0274 S32: 0.2343 S33: -0.0759 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 211 A 278 REMARK 3 RESIDUE RANGE : A 1 A 1 REMARK 3 ORIGIN FOR THE GROUP (A): 53.3440 44.3450 86.2810 REMARK 3 T TENSOR REMARK 3 T11: 0.0460 T22: 0.0447 REMARK 3 T33: 0.0155 T12: -0.0001 REMARK 3 T13: 0.0159 T23: -0.0211 REMARK 3 L TENSOR REMARK 3 L11: 3.2345 L22: 2.3694 REMARK 3 L33: 2.1545 L12: -0.3134 REMARK 3 L13: 0.4300 L23: -0.4405 REMARK 3 S TENSOR REMARK 3 S11: -0.0022 S12: -0.1387 S13: 0.2466 REMARK 3 S21: 0.1270 S22: 0.0526 S23: 0.1168 REMARK 3 S31: -0.1263 S32: -0.0861 S33: -0.0504 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1NH8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JAN-03. REMARK 100 THE RCSB ID CODE IS RCSB017869. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-AUG-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37740 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 25.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: LITHIUM SULFATE, AMMONIUM SULFATE, PH REMARK 280 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 56.87700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 32.83795 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 41.41800 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 56.87700 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 32.83795 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 41.41800 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 56.87700 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 32.83795 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 41.41800 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 56.87700 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 32.83795 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 41.41800 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 56.87700 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 32.83795 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 41.41800 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 56.87700 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 32.83795 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 41.41800 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 65.67590 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 82.83600 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 65.67590 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 82.83600 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 65.67590 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 82.83600 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 65.67590 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 82.83600 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 65.67590 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 82.83600 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 65.67590 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 82.83600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -98.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 65.67590 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 82.83600 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 27580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 66020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -348.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 113.75400 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 56.87700 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 98.51385 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 56.87700 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 -32.83795 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 82.83600 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 65.67590 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 82.83600 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 113.75400 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 65.67590 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 82.83600 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -19 REMARK 465 SER A -18 REMARK 465 GLY A -17 REMARK 465 ARG A -16 REMARK 465 PRO A -15 REMARK 465 VAL A -14 REMARK 465 LEU A -13 REMARK 465 GLY A -12 REMARK 465 SER A -11 REMARK 465 SER A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 SER A -3 REMARK 465 SER A -2 REMARK 465 GLY A -1 REMARK 465 MET A 0 REMARK 465 GLY A 186 REMARK 465 THR A 187 REMARK 465 ASP A 188 REMARK 465 GLY A 189 REMARK 465 GLN A 190 REMARK 465 ASP A 191 REMARK 465 GLN A 192 REMARK 465 THR A 193 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 3210 O HOH A 3211 1.68 REMARK 500 O HOH A 3206 O HOH A 3228 1.90 REMARK 500 O HOH A 3203 O HOH A 3236 2.09 REMARK 500 OE1 GLN A 210 O HOH A 3029 2.13 REMARK 500 O HOH A 3200 O HOH A 3201 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 3113 O HOH A 3113 17555 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 67 -168.76 -160.71 REMARK 500 SER A 236 142.97 -170.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A3031 DISTANCE = 5.25 ANGSTROMS REMARK 525 HOH A3046 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH A3068 DISTANCE = 5.31 ANGSTROMS REMARK 525 HOH A3194 DISTANCE = 5.30 ANGSTROMS REMARK 525 HOH A3195 DISTANCE = 8.12 ANGSTROMS REMARK 525 HOH A3220 DISTANCE = 8.81 ANGSTROMS REMARK 525 HOH A3232 DISTANCE = 10.09 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 HIS A 289 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 285 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 286 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 287 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AMP A 288 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HIS A 289 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1NH7 RELATED DB: PDB REMARK 900 RELATED ID: RV2121C RELATED DB: TARGETDB DBREF 1NH8 A 1 284 UNP P60759 HIS1_MYCTU 1 284 SEQADV 1NH8 HIS A -19 UNP P60759 EXPRESSION TAG SEQADV 1NH8 SER A -18 UNP P60759 EXPRESSION TAG SEQADV 1NH8 GLY A -17 UNP P60759 EXPRESSION TAG SEQADV 1NH8 ARG A -16 UNP P60759 EXPRESSION TAG SEQADV 1NH8 PRO A -15 UNP P60759 EXPRESSION TAG SEQADV 1NH8 VAL A -14 UNP P60759 EXPRESSION TAG SEQADV 1NH8 LEU A -13 UNP P60759 EXPRESSION TAG SEQADV 1NH8 GLY A -12 UNP P60759 EXPRESSION TAG SEQADV 1NH8 SER A -11 UNP P60759 EXPRESSION TAG SEQADV 1NH8 SER A -10 UNP P60759 EXPRESSION TAG SEQADV 1NH8 HIS A -9 UNP P60759 EXPRESSION TAG SEQADV 1NH8 HIS A -8 UNP P60759 EXPRESSION TAG SEQADV 1NH8 HIS A -7 UNP P60759 EXPRESSION TAG SEQADV 1NH8 HIS A -6 UNP P60759 EXPRESSION TAG SEQADV 1NH8 HIS A -5 UNP P60759 EXPRESSION TAG SEQADV 1NH8 HIS A -4 UNP P60759 EXPRESSION TAG SEQADV 1NH8 SER A -3 UNP P60759 EXPRESSION TAG SEQADV 1NH8 SER A -2 UNP P60759 EXPRESSION TAG SEQADV 1NH8 GLY A -1 UNP P60759 EXPRESSION TAG SEQADV 1NH8 MET A 0 UNP P60759 EXPRESSION TAG SEQRES 1 A 304 HIS SER GLY ARG PRO VAL LEU GLY SER SER HIS HIS HIS SEQRES 2 A 304 HIS HIS HIS SER SER GLY MET MET LEU ARG VAL ALA VAL SEQRES 3 A 304 PRO ASN LYS GLY ALA LEU SER GLU PRO ALA THR GLU ILE SEQRES 4 A 304 LEU ALA GLU ALA GLY TYR ARG ARG ARG THR ASP SER LYS SEQRES 5 A 304 ASP LEU THR VAL ILE ASP PRO VAL ASN ASN VAL GLU PHE SEQRES 6 A 304 PHE PHE LEU ARG PRO LYS ASP ILE ALA ILE TYR VAL GLY SEQRES 7 A 304 SER GLY GLU LEU ASP PHE GLY ILE THR GLY ARG ASP LEU SEQRES 8 A 304 VAL CYS ASP SER GLY ALA GLN VAL ARG GLU ARG LEU ALA SEQRES 9 A 304 LEU GLY PHE GLY SER SER SER PHE ARG TYR ALA ALA PRO SEQRES 10 A 304 ALA GLY ARG ASN TRP THR THR ALA ASP LEU ALA GLY MET SEQRES 11 A 304 ARG ILE ALA THR ALA TYR PRO ASN LEU VAL ARG LYS ASP SEQRES 12 A 304 LEU ALA THR LYS GLY ILE GLU ALA THR VAL ILE ARG LEU SEQRES 13 A 304 ASP GLY ALA VAL GLU ILE SER VAL GLN LEU GLY VAL ALA SEQRES 14 A 304 ASP ALA ILE ALA ASP VAL VAL GLY SER GLY ARG THR LEU SEQRES 15 A 304 SER GLN HIS ASP LEU VAL ALA PHE GLY GLU PRO LEU CYS SEQRES 16 A 304 ASP SER GLU ALA VAL LEU ILE GLU ARG ALA GLY THR ASP SEQRES 17 A 304 GLY GLN ASP GLN THR GLU ALA ARG ASP GLN LEU VAL ALA SEQRES 18 A 304 ARG VAL GLN GLY VAL VAL PHE GLY GLN GLN TYR LEU MET SEQRES 19 A 304 LEU ASP TYR ASP CYS PRO ARG SER ALA LEU LYS LYS ALA SEQRES 20 A 304 THR ALA ILE THR PRO GLY LEU GLU SER PRO THR ILE ALA SEQRES 21 A 304 PRO LEU ALA ASP PRO ASP TRP VAL ALA ILE ARG ALA LEU SEQRES 22 A 304 VAL PRO ARG ARG ASP VAL ASN GLY ILE MET ASP GLU LEU SEQRES 23 A 304 ALA ALA ILE GLY ALA LYS ALA ILE LEU ALA SER ASP ILE SEQRES 24 A 304 ARG PHE CYS ARG PHE HET SO4 A 285 5 HET SO4 A 286 5 HET SO4 A 287 5 HET AMP A 288 23 HET HIS A 289 10 HETNAM SO4 SULFATE ION HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM HIS HISTIDINE FORMUL 2 SO4 3(O4 S 2-) FORMUL 5 AMP C10 H14 N5 O7 P FORMUL 6 HIS C6 H10 N3 O2 1+ FORMUL 7 HOH *236(H2 O) HELIX 1 1 LEU A 12 ALA A 23 1 12 HELIX 2 2 ARG A 49 LYS A 51 5 3 HELIX 3 3 ASP A 52 GLY A 60 1 9 HELIX 4 4 ARG A 69 GLY A 76 1 8 HELIX 5 5 THR A 103 ALA A 108 5 6 HELIX 6 6 TYR A 116 GLY A 128 1 13 HELIX 7 7 GLU A 141 LEU A 146 1 6 HELIX 8 8 GLY A 159 HIS A 165 1 7 HELIX 9 9 GLU A 194 GLN A 210 1 17 HELIX 10 10 ALA A 223 THR A 231 1 9 HELIX 11 11 ASP A 258 ILE A 269 1 12 SHEET 1 A 6 THR A 35 ASP A 38 0 SHEET 2 A 6 VAL A 43 LEU A 48 -1 O PHE A 45 N VAL A 36 SHEET 3 A 6 LEU A 2 PRO A 7 1 N LEU A 2 O GLU A 44 SHEET 4 A 6 PHE A 64 GLY A 68 1 O PHE A 64 N ALA A 5 SHEET 5 A 6 ALA A 179 ARG A 184 -1 O ILE A 182 N GLY A 65 SHEET 6 A 6 VAL A 79 ALA A 84 -1 N ARG A 80 O GLU A 183 SHEET 1 B 5 THR A 132 ARG A 135 0 SHEET 2 B 5 ARG A 111 THR A 114 1 N ILE A 112 O ILE A 134 SHEET 3 B 5 ALA A 151 VAL A 156 1 O ALA A 151 N ALA A 113 SHEET 4 B 5 SER A 90 PRO A 97 -1 N SER A 91 O VAL A 156 SHEET 5 B 5 LEU A 167 SER A 177 -1 O VAL A 168 N ALA A 96 SHEET 1 C 4 THR A 238 PRO A 241 0 SHEET 2 C 4 TRP A 247 PRO A 255 -1 O ALA A 249 N ALA A 240 SHEET 3 C 4 TYR A 212 PRO A 220 -1 N CYS A 219 O VAL A 248 SHEET 4 C 4 LYS A 272 SER A 277 -1 O LYS A 272 N ASP A 218 LINK N ASP A 176 O4 SO4 A 285 1555 1555 2.03 SITE 1 AC1 2 CYS A 175 ASP A 176 SITE 1 AC2 7 ALA A 108 GLY A 109 MET A 110 ASP A 150 SITE 2 AC2 7 HOH A3117 HOH A3208 HOH A3209 SITE 1 AC3 5 ARG A 121 ARG A 135 HOH A3093 HOH A3147 SITE 2 AC3 5 HOH A3153 SITE 1 AC4 11 ASP A 30 TYR A 116 VAL A 155 GLY A 157 SITE 2 AC4 11 SER A 158 GLY A 159 ARG A 160 THR A 161 SITE 3 AC4 11 HOH A3096 HOH A3126 HOH A3146 SITE 1 AC5 12 TYR A 217 ASP A 218 GLY A 233 LEU A 234 SITE 2 AC5 12 SER A 236 THR A 238 LEU A 242 ARG A 251 SITE 3 AC5 12 LEU A 253 ALA A 273 LEU A 275 HOH A3161 CRYST1 113.754 113.754 124.254 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008791 0.005075 0.000000 0.00000 SCALE2 0.000000 0.010151 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008048 0.00000