PDB Short entry for 1NV7 HEADER HYDROLASE 02-FEB-03 1NV7 TITLE FRUCTOSE-1,6-BISPHOSPHATASE COMPLEX WITH AMP, MAGNESIUM, FRUCTOSE-6- TITLE 2 PHOSPHATE, PHOSPHATE AND THALLIUM (20 MM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: FRUCTOSE-1,6-BISPHOSPHATASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.1.3.11; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 3 ORGANISM_COMMON: PIG; SOURCE 4 ORGANISM_TAXID: 9823; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BISPHOSPHATASE, ALLOSTERIC ENZYMES, GLUCONEOGENESIS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.CHOE,C.V.IANCU,H.J.FROMM,R.B.HONZATKO REVDAT 5 25-OCT-23 1NV7 1 HETSYN REVDAT 4 29-JUL-20 1NV7 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE REVDAT 3 20-NOV-19 1NV7 1 LINK REVDAT 2 24-FEB-09 1NV7 1 VERSN REVDAT 1 08-JUL-03 1NV7 0 JRNL AUTH J.Y.CHOE,S.W.NELSON,H.J.FROMM,R.B.HONZATKO JRNL TITL INTERACTION OF TL+ WITH PRODUCT COMPLEXES OF JRNL TITL 2 FRUCTOSE-1,6-BISPHOSPHATASE JRNL REF J.BIOL.CHEM. V. 278 16008 2003 JRNL REFN ISSN 0021-9258 JRNL PMID 12595529 JRNL DOI 10.1074/JBC.M212394200 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 5.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.189 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.189 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 3822 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 38218 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : NULL REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE (F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4992 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 98 REMARK 3 SOLVENT ATOMS : 425 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : NULL REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : NULL REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : NULL REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : NULL REMARK 3 NUMBER OF RESTRAINTS : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 ANGLE DISTANCES (A) : NULL REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : NULL REMARK 3 ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : NULL REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : NULL REMARK 3 SIMILAR ADP COMPONENTS (A**2) : NULL REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH & HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1NV7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-FEB-03. REMARK 100 THE DEPOSITION ID IS D_1000018239. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-MAR-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRANDEIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40229 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.10400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.25 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1EYJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, HEPES, PH 7.4, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 29.97500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 83.07500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.97500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 83.07500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -132.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 24990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -285.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 59.95000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 166.15000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 1001 REMARK 465 ASP A 1002 REMARK 465 GLN A 1003 REMARK 465 ALA A 1004 REMARK 465 ALA A 1005 REMARK 465 PHE A 1006 REMARK 465 ASP A 1007 REMARK 465 THR A 1008 REMARK 465 ALA A 1336 REMARK 465 LYS A 1337 REMARK 465 THR B 2001 REMARK 465 ASP B 2002 REMARK 465 GLN B 2003 REMARK 465 ALA B 2004 REMARK 465 ALA B 2005 REMARK 465 PHE B 2006 REMARK 465 ASP B 2007 REMARK 465 THR B 2008 REMARK 465 ALA B 2336 REMARK 465 LYS B 2337 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 1072 O HOH A 5371 0.83 REMARK 500 CE LYS A 1072 O HOH A 5371 1.30 REMARK 500 OE2 GLU A 1218 O HOH A 5392 2.04 REMARK 500 CD1 ILE A 1223 O HOH A 5109 2.11 REMARK 500 CD1 ILE A 1211 O HOH A 5026 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A1254 CD - NE - CZ ANGL. DEV. = 13.3 DEGREES REMARK 500 ARG A1254 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A1254 NE - CZ - NH2 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG B2254 CD - NE - CZ ANGL. DEV. = 25.7 DEGREES REMARK 500 ARG B2254 NE - CZ - NH1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG B2254 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG B2276 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A1062 61.02 72.48 REMARK 500 GLN A1069 -23.48 -167.86 REMARK 500 LYS A1071 109.52 -27.37 REMARK 500 LEU A1153 52.15 -96.15 REMARK 500 SER A1207 24.43 -142.72 REMARK 500 SER A1270 73.33 -109.04 REMARK 500 GLU A1280 -61.41 -127.26 REMARK 500 HIS A1334 38.73 -83.60 REMARK 500 THR B2063 -21.84 -162.07 REMARK 500 GLN B2069 92.71 -65.59 REMARK 500 LYS B2072 150.95 -36.83 REMARK 500 ASN B2142 51.27 -104.02 REMARK 500 SER B2207 24.27 -141.33 REMARK 500 LYS B2268 -83.15 -47.12 REMARK 500 GLU B2280 -61.97 -124.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A3341 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A1097 OE1 REMARK 620 2 ASP A1118 OD2 83.9 REMARK 620 3 ASP A1121 OD2 151.8 70.2 REMARK 620 4 GLU A1280 OE2 114.6 97.3 80.7 REMARK 620 5 PO4 A3434 O2 76.8 92.3 92.8 165.7 REMARK 620 6 PO4 A3434 O4 84.6 154.9 114.4 107.8 63.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TL A3352 TL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A1097 OE1 REMARK 620 2 GLU A1097 OE2 42.3 REMARK 620 3 PO4 A3434 O4 63.7 60.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TL A3353 TL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A1097 OE2 REMARK 620 2 GLU A1098 OE1 131.1 REMARK 620 3 GLU A1098 OE2 98.8 41.0 REMARK 620 4 PO4 A3434 O1 60.9 150.6 119.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TL A3354 TL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A1097 OE1 REMARK 620 2 GLU A1097 OE2 39.9 REMARK 620 3 GLU A1098 OE2 99.6 81.7 REMARK 620 4 ASP A1118 OD1 56.4 96.3 116.1 REMARK 620 5 LEU A1120 O 121.4 141.7 135.1 78.0 REMARK 620 6 PO4 A3434 O1 82.3 58.1 113.5 118.8 91.1 REMARK 620 7 PO4 A3434 O2 56.5 69.0 150.7 67.4 74.0 51.8 REMARK 620 8 HOH A5343 O 134.7 113.0 112.6 125.8 50.4 56.3 81.6 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TL A3351 TL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A1280 OE1 REMARK 620 2 GLU A1280 OE2 43.9 REMARK 620 3 F6P A3336 O1 127.4 86.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B4341 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B2097 OE1 REMARK 620 2 ASP B2118 OD2 83.2 REMARK 620 3 ASP B2121 OD2 158.8 76.7 REMARK 620 4 GLU B2280 OE1 99.8 91.7 87.4 REMARK 620 5 PO4 B4434 O4 91.1 89.2 82.2 169.1 REMARK 620 6 PO4 B4434 O3 91.3 154.9 104.1 113.4 66.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TL B4352 TL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B2097 OE1 REMARK 620 2 GLU B2097 OE2 40.0 REMARK 620 3 GLU B2280 OE1 54.8 90.3 REMARK 620 4 PO4 B4434 O3 67.0 62.7 64.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TL B4353 TL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B2097 OE2 REMARK 620 2 GLU B2098 OE1 86.6 REMARK 620 3 GLU B2098 OE2 130.7 46.1 REMARK 620 4 PO4 B4434 O1 54.8 115.6 148.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TL B4354 TL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B2097 OE1 REMARK 620 2 GLU B2097 OE2 39.3 REMARK 620 3 GLU B2098 OE1 92.1 69.0 REMARK 620 4 ASP B2118 OD1 65.7 104.1 113.1 REMARK 620 5 LEU B2120 O 124.9 151.0 139.2 74.1 REMARK 620 6 PO4 B4434 O1 76.4 58.1 108.0 123.8 98.1 REMARK 620 7 PO4 B4434 O4 58.2 76.4 145.3 73.1 75.4 51.6 REMARK 620 8 HOH B5310 O 138.0 118.3 112.8 125.7 52.2 64.3 85.1 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TL B4351 TL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B2280 OE1 REMARK 620 2 GLU B2280 OE2 41.5 REMARK 620 3 F6P B4336 O1 58.5 81.0 REMARK 620 4 PO4 B4434 O3 65.4 106.9 55.9 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1NUZ RELATED DB: PDB REMARK 900 COMPLEX WITH MAGNESIUM, FRUCTOSE-6-PHOSPHATE AND PHOSPHATE, AT 1.9A REMARK 900 RELATED ID: 1NV0 RELATED DB: PDB REMARK 900 COMPLEX WITH MAGNESIUM, FRUCTOSE-6-PHOSPHATE, PHOSPHATE AND 1MM REMARK 900 THALLIUM REMARK 900 RELATED ID: 1NV1 RELATED DB: PDB REMARK 900 COMPLEX WITH MAGNESIUM, FRUCTOSE-6-PHOSPHATE, PHOSPHATE AND 5MM REMARK 900 THALLIUM REMARK 900 RELATED ID: 1NV2 RELATED DB: PDB REMARK 900 COMPLEX WITH MAGNESIUM, FRUCTOSE-6-PHOSPHATE, PHOSPHATE AND 20MM REMARK 900 THALLIUM REMARK 900 RELATED ID: 1NV3 RELATED DB: PDB REMARK 900 COMPLEX WITH MAGNESIUM, FRUCTOSE-6-PHOSPHATE, PHOSPHATE AND 100MM REMARK 900 THALLIUM REMARK 900 RELATED ID: 1NV4 RELATED DB: PDB REMARK 900 COMPLEX WITH MAGNESIUM, FRUCTOSE-6-PHOSPHATE, PHOSPHATE, EDTA AND REMARK 900 1MM THALLIUM REMARK 900 RELATED ID: 1NV5 RELATED DB: PDB REMARK 900 COMPLEX WITH MAGNESIUM, FRUCTOSE-6-PHOSPHATE, PHOSPHATE, EDTA AND REMARK 900 5MM THALLIUM REMARK 900 RELATED ID: 1NV6 RELATED DB: PDB REMARK 900 COMPLEX WITH MAGNESIUM, FRUCTOSE-6-PHOSPHATE, PHOSPHATE, EDTA AND REMARK 900 20MM THALLIUM DBREF 1NV7 A 1001 1337 UNP P00636 F16P_PIG 1 337 DBREF 1NV7 B 2001 2337 UNP P00636 F16P_PIG 1 337 SEQRES 1 A 337 THR ASP GLN ALA ALA PHE ASP THR ASN ILE VAL THR LEU SEQRES 2 A 337 THR ARG PHE VAL MET GLU GLU GLY ARG LYS ALA ARG GLY SEQRES 3 A 337 THR GLY GLU MET THR GLN LEU LEU ASN SER LEU CYS THR SEQRES 4 A 337 ALA VAL LYS ALA ILE SER THR ALA VAL ARG LYS ALA GLY SEQRES 5 A 337 ILE ALA HIS LEU TYR GLY ILE ALA GLY SER THR ASN VAL SEQRES 6 A 337 THR GLY ASP GLN VAL LYS LYS LEU ASP VAL LEU SER ASN SEQRES 7 A 337 ASP LEU VAL ILE ASN VAL LEU LYS SER SER PHE ALA THR SEQRES 8 A 337 CYS VAL LEU VAL SER GLU GLU ASP LYS ASN ALA ILE ILE SEQRES 9 A 337 VAL GLU PRO GLU LYS ARG GLY LYS TYR VAL VAL CYS PHE SEQRES 10 A 337 ASP PRO LEU ASP GLY SER SER ASN ILE ASP CYS LEU VAL SEQRES 11 A 337 SER ILE GLY THR ILE PHE GLY ILE TYR ARG LYS ASN SER SEQRES 12 A 337 THR ASP GLU PRO SER GLU LYS ASP ALA LEU GLN PRO GLY SEQRES 13 A 337 ARG ASN LEU VAL ALA ALA GLY TYR ALA LEU TYR GLY SER SEQRES 14 A 337 ALA THR MET LEU VAL LEU ALA MET VAL ASN GLY VAL ASN SEQRES 15 A 337 CYS PHE MET LEU ASP PRO ALA ILE GLY GLU PHE ILE LEU SEQRES 16 A 337 VAL ASP ARG ASP VAL LYS ILE LYS LYS LYS GLY SER ILE SEQRES 17 A 337 TYR SER ILE ASN GLU GLY TYR ALA LYS GLU PHE ASP PRO SEQRES 18 A 337 ALA ILE THR GLU TYR ILE GLN ARG LYS LYS PHE PRO PRO SEQRES 19 A 337 ASP ASN SER ALA PRO TYR GLY ALA ARG TYR VAL GLY SER SEQRES 20 A 337 MET VAL ALA ASP VAL HIS ARG THR LEU VAL TYR GLY GLY SEQRES 21 A 337 ILE PHE MET TYR PRO ALA ASN LYS LYS SER PRO LYS GLY SEQRES 22 A 337 LYS LEU ARG LEU LEU TYR GLU CYS ASN PRO MET ALA TYR SEQRES 23 A 337 VAL MET GLU LYS ALA GLY GLY LEU ALA THR THR GLY LYS SEQRES 24 A 337 GLU ALA VAL LEU ASP ILE VAL PRO THR ASP ILE HIS GLN SEQRES 25 A 337 ARG ALA PRO ILE ILE LEU GLY SER PRO GLU ASP VAL THR SEQRES 26 A 337 GLU LEU LEU GLU ILE TYR GLN LYS HIS ALA ALA LYS SEQRES 1 B 337 THR ASP GLN ALA ALA PHE ASP THR ASN ILE VAL THR LEU SEQRES 2 B 337 THR ARG PHE VAL MET GLU GLU GLY ARG LYS ALA ARG GLY SEQRES 3 B 337 THR GLY GLU MET THR GLN LEU LEU ASN SER LEU CYS THR SEQRES 4 B 337 ALA VAL LYS ALA ILE SER THR ALA VAL ARG LYS ALA GLY SEQRES 5 B 337 ILE ALA HIS LEU TYR GLY ILE ALA GLY SER THR ASN VAL SEQRES 6 B 337 THR GLY ASP GLN VAL LYS LYS LEU ASP VAL LEU SER ASN SEQRES 7 B 337 ASP LEU VAL ILE ASN VAL LEU LYS SER SER PHE ALA THR SEQRES 8 B 337 CYS VAL LEU VAL SER GLU GLU ASP LYS ASN ALA ILE ILE SEQRES 9 B 337 VAL GLU PRO GLU LYS ARG GLY LYS TYR VAL VAL CYS PHE SEQRES 10 B 337 ASP PRO LEU ASP GLY SER SER ASN ILE ASP CYS LEU VAL SEQRES 11 B 337 SER ILE GLY THR ILE PHE GLY ILE TYR ARG LYS ASN SER SEQRES 12 B 337 THR ASP GLU PRO SER GLU LYS ASP ALA LEU GLN PRO GLY SEQRES 13 B 337 ARG ASN LEU VAL ALA ALA GLY TYR ALA LEU TYR GLY SER SEQRES 14 B 337 ALA THR MET LEU VAL LEU ALA MET VAL ASN GLY VAL ASN SEQRES 15 B 337 CYS PHE MET LEU ASP PRO ALA ILE GLY GLU PHE ILE LEU SEQRES 16 B 337 VAL ASP ARG ASP VAL LYS ILE LYS LYS LYS GLY SER ILE SEQRES 17 B 337 TYR SER ILE ASN GLU GLY TYR ALA LYS GLU PHE ASP PRO SEQRES 18 B 337 ALA ILE THR GLU TYR ILE GLN ARG LYS LYS PHE PRO PRO SEQRES 19 B 337 ASP ASN SER ALA PRO TYR GLY ALA ARG TYR VAL GLY SER SEQRES 20 B 337 MET VAL ALA ASP VAL HIS ARG THR LEU VAL TYR GLY GLY SEQRES 21 B 337 ILE PHE MET TYR PRO ALA ASN LYS LYS SER PRO LYS GLY SEQRES 22 B 337 LYS LEU ARG LEU LEU TYR GLU CYS ASN PRO MET ALA TYR SEQRES 23 B 337 VAL MET GLU LYS ALA GLY GLY LEU ALA THR THR GLY LYS SEQRES 24 B 337 GLU ALA VAL LEU ASP ILE VAL PRO THR ASP ILE HIS GLN SEQRES 25 B 337 ARG ALA PRO ILE ILE LEU GLY SER PRO GLU ASP VAL THR SEQRES 26 B 337 GLU LEU LEU GLU ILE TYR GLN LYS HIS ALA ALA LYS HET F6P A3336 16 HET MG A3341 1 HET PO4 A3434 5 HET AMP A3337 23 HET TL A3351 1 HET TL A3352 1 HET TL A3353 1 HET TL A3354 1 HET F6P B4336 16 HET MG B4341 1 HET PO4 B4434 5 HET AMP B4337 23 HET TL B4351 1 HET TL B4352 1 HET TL B4353 1 HET TL B4354 1 HETNAM F6P 6-O-PHOSPHONO-BETA-D-FRUCTOFURANOSE HETNAM MG MAGNESIUM ION HETNAM PO4 PHOSPHATE ION HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM TL THALLIUM (I) ION HETSYN F6P FRUCTOSE-6-PHOSPHATE; 6-O-PHOSPHONO-BETA-D-FRUCTOSE; 6- HETSYN 2 F6P O-PHOSPHONO-D-FRUCTOSE; 6-O-PHOSPHONO-FRUCTOSE FORMUL 3 F6P 2(C6 H13 O9 P) FORMUL 4 MG 2(MG 2+) FORMUL 5 PO4 2(O4 P 3-) FORMUL 6 AMP 2(C10 H14 N5 O7 P) FORMUL 7 TL 8(TL 1+) FORMUL 19 HOH *425(H2 O) HELIX 1 1 THR A 1012 ALA A 1024 1 13 HELIX 2 2 GLY A 1028 ARG A 1049 1 22 HELIX 3 3 GLY A 1052 TYR A 1057 1 6 HELIX 4 4 LYS A 1072 SER A 1087 1 16 HELIX 5 5 GLU A 1106 GLU A 1108 5 3 HELIX 6 6 GLY A 1122 LEU A 1129 5 8 HELIX 7 7 SER A 1148 LEU A 1153 5 6 HELIX 8 8 PRO A 1155 LEU A 1159 5 5 HELIX 9 9 ASN A 1212 ALA A 1216 5 5 HELIX 10 10 ASP A 1220 PHE A 1232 1 13 HELIX 11 11 SER A 1247 GLY A 1259 1 13 HELIX 12 12 GLU A 1280 ALA A 1291 1 12 HELIX 13 13 ALA A 1301 ILE A 1305 5 5 HELIX 14 14 SER A 1320 HIS A 1334 1 15 HELIX 15 15 THR B 2012 ALA B 2024 1 13 HELIX 16 16 GLY B 2028 ARG B 2049 1 22 HELIX 17 17 GLY B 2052 TYR B 2057 1 6 HELIX 18 18 LYS B 2072 SER B 2087 1 16 HELIX 19 19 GLU B 2106 GLU B 2108 5 3 HELIX 20 20 GLY B 2122 ILE B 2126 5 5 HELIX 21 21 SER B 2148 LEU B 2153 5 6 HELIX 22 22 PRO B 2155 LEU B 2159 5 5 HELIX 23 23 ASN B 2212 PHE B 2219 5 8 HELIX 24 24 ASP B 2220 PHE B 2232 1 13 HELIX 25 25 SER B 2247 GLY B 2259 1 13 HELIX 26 26 GLU B 2280 ALA B 2291 1 12 HELIX 27 27 ALA B 2301 ILE B 2305 5 5 HELIX 28 28 SER B 2320 ALA B 2335 1 16 SHEET 1 A 8 ILE A1103 ILE A1104 0 SHEET 2 A 8 THR A1091 SER A1096 -1 N LEU A1094 O ILE A1103 SHEET 3 A 8 ARG A1110 ASP A1121 1 O VAL A1115 N VAL A1095 SHEET 4 A 8 ILE A1132 ARG A1140 -1 O GLY A1133 N ASP A1121 SHEET 5 A 8 ALA A1161 TYR A1167 -1 O ALA A1161 N ILE A1138 SHEET 6 A 8 THR A1171 MET A1177 -1 O ALA A1176 N ALA A1162 SHEET 7 A 8 GLY A1180 LEU A1186 -1 O PHE A1184 N LEU A1173 SHEET 8 A 8 PHE A1193 ASP A1197 -1 O ILE A1194 N MET A1185 SHEET 1 B 5 GLY A1241 ALA A1242 0 SHEET 2 B 5 ILE A1208 SER A1210 1 N TYR A1209 O GLY A1241 SHEET 3 B 5 ILE A1261 TYR A1264 1 O MET A1263 N SER A1210 SHEET 4 B 5 ILE A1316 GLY A1319 -1 O ILE A1316 N TYR A1264 SHEET 5 B 5 LEU A1294 THR A1296 -1 N THR A1296 O ILE A1317 SHEET 1 C 8 ILE B2103 ILE B2104 0 SHEET 2 C 8 THR B2091 SER B2096 -1 N LEU B2094 O ILE B2103 SHEET 3 C 8 ARG B2110 ASP B2121 1 O VAL B2115 N VAL B2095 SHEET 4 C 8 ILE B2132 ARG B2140 -1 O GLY B2133 N ASP B2121 SHEET 5 C 8 ALA B2161 TYR B2167 -1 O ALA B2161 N ILE B2138 SHEET 6 C 8 THR B2171 MET B2177 -1 O ALA B2176 N ALA B2162 SHEET 7 C 8 GLY B2180 ASP B2187 -1 O PHE B2184 N LEU B2173 SHEET 8 C 8 GLU B2192 ASP B2197 -1 O ILE B2194 N MET B2185 SHEET 1 D 5 GLY B2241 ALA B2242 0 SHEET 2 D 5 ILE B2208 SER B2210 1 N TYR B2209 O GLY B2241 SHEET 3 D 5 ILE B2261 TYR B2264 1 O MET B2263 N SER B2210 SHEET 4 D 5 ILE B2316 GLY B2319 -1 O ILE B2316 N TYR B2264 SHEET 5 D 5 LEU B2294 THR B2296 -1 N THR B2296 O ILE B2317 LINK OE1 GLU A1097 MG MG A3341 1555 1555 2.32 LINK OE1 GLU A1097 TL TL A3352 1555 1555 3.22 LINK OE2 GLU A1097 TL TL A3352 1555 1555 2.68 LINK OE2 GLU A1097 TL TL A3353 1555 1555 2.75 LINK OE1 GLU A1097 TL TL A3354 1555 1555 3.18 LINK OE2 GLU A1097 TL TL A3354 1555 1555 3.24 LINK OE1 GLU A1098 TL TL A3353 1555 1555 3.37 LINK OE2 GLU A1098 TL TL A3353 1555 1555 2.71 LINK OE2 GLU A1098 TL TL A3354 1555 1555 3.10 LINK OD2 ASP A1118 MG MG A3341 1555 1555 2.11 LINK OD1 ASP A1118 TL TL A3354 1555 1555 2.61 LINK O LEU A1120 TL TL A3354 1555 1555 2.78 LINK OD2 ASP A1121 MG MG A3341 1555 1555 1.90 LINK OE2 GLU A1280 MG MG A3341 1555 1555 2.13 LINK OE1 GLU A1280 TL TL A3351 1555 1555 2.94 LINK OE2 GLU A1280 TL TL A3351 1555 1555 2.94 LINK O1 F6P A3336 TL TL A3351 1555 1555 2.88 LINK MG MG A3341 O2 PO4 A3434 1555 1555 2.09 LINK MG MG A3341 O4 PO4 A3434 1555 1555 2.49 LINK TL TL A3352 O4 PO4 A3434 1555 1555 2.89 LINK TL TL A3353 O1 PO4 A3434 1555 1555 3.19 LINK TL TL A3354 O1 PO4 A3434 1555 1555 2.99 LINK TL TL A3354 O2 PO4 A3434 1555 1555 2.45 LINK TL TL A3354 O HOH A5343 1555 1555 3.47 LINK OE1 GLU B2097 MG MG B4341 1555 1555 2.17 LINK OE1 GLU B2097 TL TL B4352 1555 1555 2.97 LINK OE2 GLU B2097 TL TL B4352 1555 1555 3.37 LINK OE2 GLU B2097 TL TL B4353 1555 1555 2.45 LINK OE1 GLU B2097 TL TL B4354 1555 1555 3.46 LINK OE2 GLU B2097 TL TL B4354 1555 1555 2.77 LINK OE1 GLU B2098 TL TL B4353 1555 1555 2.40 LINK OE2 GLU B2098 TL TL B4353 1555 1555 3.00 LINK OE1 GLU B2098 TL TL B4354 1555 1555 3.08 LINK OD2 ASP B2118 MG MG B4341 1555 1555 2.03 LINK OD1 ASP B2118 TL TL B4354 1555 1555 2.67 LINK O LEU B2120 TL TL B4354 1555 1555 2.75 LINK OD2 ASP B2121 MG MG B4341 1555 1555 1.84 LINK OE1 GLU B2280 MG MG B4341 1555 1555 1.82 LINK OE1 GLU B2280 TL TL B4351 1555 1555 3.21 LINK OE2 GLU B2280 TL TL B4351 1555 1555 2.97 LINK OE1 GLU B2280 TL TL B4352 1555 1555 3.58 LINK O1 F6P B4336 TL TL B4351 1555 1555 2.72 LINK MG MG B4341 O4 PO4 B4434 1555 1555 2.07 LINK MG MG B4341 O3 PO4 B4434 1555 1555 2.35 LINK TL TL B4351 O3 PO4 B4434 1555 1555 3.27 LINK TL TL B4352 O3 PO4 B4434 1555 1555 2.89 LINK TL TL B4353 O1 PO4 B4434 1555 1555 3.35 LINK TL TL B4354 O1 PO4 B4434 1555 1555 2.96 LINK TL TL B4354 O4 PO4 B4434 1555 1555 2.54 LINK TL TL B4354 O HOH B5310 1555 1555 3.50 CRYST1 59.950 166.150 79.290 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016681 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006019 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012612 0.00000