PDB Short entry for 1OF0 HEADER OXIDOREDUCTASE 03-APR-03 1OF0 TITLE CRYSTAL STRUCTURE OF BACILLUS SUBTILIS COTA AFTER 1H SOAKING WITH ABTS COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPORE COAT PROTEIN A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: COTA; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS OXIDOREDUCTASE, OXIDASE, LACCASE, ENDOSPORE COAT, REACTION CYCLE, KEYWDS 2 SPORULATION, COPPER-DEPENDENT EXPDTA X-RAY DIFFRACTION AUTHOR F.J.ENGUITA,D.MARCAL,R.GRENHA,L.O.MARTINS,A.O.HENRIQUES,M.A.CARRONDO REVDAT 4 13-DEC-23 1OF0 1 LINK REVDAT 3 24-JUL-19 1OF0 1 REMARK LINK REVDAT 2 24-FEB-09 1OF0 1 VERSN REVDAT 1 21-MAY-04 1OF0 0 JRNL AUTH F.J.ENGUITA,D.MARCAL,R.GRENHA,L.O.MARTINS,A.O.HENRIQUES, JRNL AUTH 2 M.A.CARRONDO JRNL TITL STRUCTURAL CHARACTERIZATION OF A BACTERIAL LACCASE REACTION JRNL TITL 2 CYCLE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 100.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 30797 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1530 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.60 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4812 REMARK 3 BIN R VALUE (WORKING SET) : 0.2320 REMARK 3 BIN FREE R VALUE : 0.3120 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 261 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.019 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4045 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 51 REMARK 3 SOLVENT ATOMS : 238 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.30000 REMARK 3 B22 (A**2) : 1.99000 REMARK 3 B33 (A**2) : -4.28000 REMARK 3 B12 (A**2) : 4.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.25 REMARK 3 ESD FROM SIGMAA (A) : 0.22 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.33 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.890 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ABT.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : GOL.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ABT.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : GOL.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: COMPLETENESS FOR REMARK 4 REMARK 4 1OF0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-APR-03. REMARK 100 THE DEPOSITION ID IS D_1290012413. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-SEP-02 REMARK 200 TEMPERATURE (KELVIN) : 110.0 REMARK 200 PH : 6.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8459 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30797 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 19.140 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.32100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.950 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1GSK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.41567 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 90.83133 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 90.83133 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 45.41567 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 INVOLVED IN BROWN PIGMENTATION DURING SPOROGENESIS REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 90 REMARK 465 SER A 91 REMARK 465 ASP A 92 REMARK 465 SER A 93 REMARK 465 GLN A 94 REMARK 465 HIS A 95 REMARK 465 GLU A 96 REMARK 465 HIS A 512 REMARK 465 LYS A 513 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A 511 CA C O CB CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O3 GOL A 1517 O HOH A 2237 1.82 REMARK 500 O TYR A 500 O HOH A 2231 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 135 -35.42 -137.44 REMARK 500 HIS A 155 28.43 -141.27 REMARK 500 ASP A 187 -122.46 59.94 REMARK 500 ASN A 214 70.15 57.07 REMARK 500 TRP A 240 73.78 15.45 REMARK 500 THR A 260 -50.59 -122.57 REMARK 500 ALA A 297 -10.88 77.38 REMARK 500 THR A 330 -102.52 -125.67 REMARK 500 ASP A 331 2.91 -62.47 REMARK 500 ALA A 375 -137.31 -132.30 REMARK 500 THR A 377 -155.37 -127.41 REMARK 500 LEU A 425 -58.58 65.08 REMARK 500 TYR A 488 -160.47 -126.43 REMARK 500 TYR A 500 66.18 -114.40 REMARK 500 ASP A 501 19.10 58.93 REMARK 500 MET A 502 52.04 -94.25 REMARK 500 ASP A 510 -61.88 -121.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A1512 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 107 ND1 REMARK 620 2 HIS A 153 NE2 141.8 REMARK 620 3 HIS A 493 NE2 103.2 105.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A1513 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 155 NE2 REMARK 620 2 HIS A 424 NE2 108.8 REMARK 620 3 HIS A 491 NE2 96.1 113.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A1511 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 419 ND1 REMARK 620 2 CYS A 492 SG 115.3 REMARK 620 3 HIS A 497 ND1 119.2 124.1 REMARK 620 N 1 2 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 A1511 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 A1512 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 A1513 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C1O A1514 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OXY A1515 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EBS A1518 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1516 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1517 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1GSK RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF COTA, AN ENDOSPORE COAT PROTEIN FROM BACILLUS REMARK 900 SUBTILIS REMARK 900 RELATED ID: 1HKP RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF BACILLUS SUBTILIS COTA AFTER 1H SOAKING WITH REMARK 900 SYRINGALDAZINE (SGZ) REMARK 900 RELATED ID: 1HKZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF BACILLUS SUBTILIS COTA AFTER 8H SOAKING WITH REMARK 900 ABTS REMARK 900 RELATED ID: 1HL0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF BACILLUS SUBTILIS COTA AFTER 20H SOAKING WITH REMARK 900 SYRINGALDAZINE (SGZ) REMARK 900 RELATED ID: 1HL1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF BACILLUS SUBTILIS COTA AFTER20H SOAKING WITH REMARK 900 ABTS REMARK 900 RELATED ID: 1OGR RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF BACILLUS SUBTILIS COTA AFTER 6H SOAKING WITH REMARK 900 ABTS REMARK 900 RELATED ID: 1UVW RELATED DB: PDB REMARK 900 BACILLUS SUBTILIS COTA LACCASE ADDUCT WITH ABTS DBREF 1OF0 A 1 513 UNP P07788 COTA_BACSU 1 513 SEQRES 1 A 513 MET THR LEU GLU LYS PHE VAL ASP ALA LEU PRO ILE PRO SEQRES 2 A 513 ASP THR LEU LYS PRO VAL GLN GLN SER LYS GLU LYS THR SEQRES 3 A 513 TYR TYR GLU VAL THR MET GLU GLU CYS THR HIS GLN LEU SEQRES 4 A 513 HIS ARG ASP LEU PRO PRO THR ARG LEU TRP GLY TYR ASN SEQRES 5 A 513 GLY LEU PHE PRO GLY PRO THR ILE GLU VAL LYS ARG ASN SEQRES 6 A 513 GLU ASN VAL TYR VAL LYS TRP MET ASN ASN LEU PRO SER SEQRES 7 A 513 THR HIS PHE LEU PRO ILE ASP HIS THR ILE HIS HIS SER SEQRES 8 A 513 ASP SER GLN HIS GLU GLU PRO GLU VAL LYS THR VAL VAL SEQRES 9 A 513 HIS LEU HIS GLY GLY VAL THR PRO ASP ASP SER ASP GLY SEQRES 10 A 513 TYR PRO GLU ALA TRP PHE SER LYS ASP PHE GLU GLN THR SEQRES 11 A 513 GLY PRO TYR PHE LYS ARG GLU VAL TYR HIS TYR PRO ASN SEQRES 12 A 513 GLN GLN ARG GLY ALA ILE LEU TRP TYR HIS ASP HIS ALA SEQRES 13 A 513 MET ALA LEU THR ARG LEU ASN VAL TYR ALA GLY LEU VAL SEQRES 14 A 513 GLY ALA TYR ILE ILE HIS ASP PRO LYS GLU LYS ARG LEU SEQRES 15 A 513 LYS LEU PRO SER ASP GLU TYR ASP VAL PRO LEU LEU ILE SEQRES 16 A 513 THR ASP ARG THR ILE ASN GLU ASP GLY SER LEU PHE TYR SEQRES 17 A 513 PRO SER ALA PRO GLU ASN PRO SER PRO SER LEU PRO ASN SEQRES 18 A 513 PRO SER ILE VAL PRO ALA PHE CYS GLY GLU THR ILE LEU SEQRES 19 A 513 VAL ASN GLY LYS VAL TRP PRO TYR LEU GLU VAL GLU PRO SEQRES 20 A 513 ARG LYS TYR ARG PHE ARG VAL ILE ASN ALA SER ASN THR SEQRES 21 A 513 ARG THR TYR ASN LEU SER LEU ASP ASN GLY GLY ASP PHE SEQRES 22 A 513 ILE GLN ILE GLY SER ASP GLY GLY LEU LEU PRO ARG SER SEQRES 23 A 513 VAL LYS LEU ASN SER PHE SER LEU ALA PRO ALA GLU ARG SEQRES 24 A 513 TYR ASP ILE ILE ILE ASP PHE THR ALA TYR GLU GLY GLU SEQRES 25 A 513 SER ILE ILE LEU ALA ASN SER ALA GLY CYS GLY GLY ASP SEQRES 26 A 513 VAL ASN PRO GLU THR ASP ALA ASN ILE MET GLN PHE ARG SEQRES 27 A 513 VAL THR LYS PRO LEU ALA GLN LYS ASP GLU SER ARG LYS SEQRES 28 A 513 PRO LYS TYR LEU ALA SER TYR PRO SER VAL GLN HIS GLU SEQRES 29 A 513 ARG ILE GLN ASN ILE ARG THR LEU LYS LEU ALA GLY THR SEQRES 30 A 513 GLN ASP GLU TYR GLY ARG PRO VAL LEU LEU LEU ASN ASN SEQRES 31 A 513 LYS ARG TRP HIS ASP PRO VAL THR GLU THR PRO LYS VAL SEQRES 32 A 513 GLY THR THR GLU ILE TRP SER ILE ILE ASN PRO THR ARG SEQRES 33 A 513 GLY THR HIS PRO ILE HIS LEU HIS LEU VAL SER PHE ARG SEQRES 34 A 513 VAL LEU ASP ARG ARG PRO PHE ASP ILE ALA ARG TYR GLN SEQRES 35 A 513 GLU SER GLY GLU LEU SER TYR THR GLY PRO ALA VAL PRO SEQRES 36 A 513 PRO PRO PRO SER GLU LYS GLY TRP LYS ASP THR ILE GLN SEQRES 37 A 513 ALA HIS ALA GLY GLU VAL LEU ARG ILE ALA ALA THR PHE SEQRES 38 A 513 GLY PRO TYR SER GLY ARG TYR VAL TRP HIS CYS HIS ILE SEQRES 39 A 513 LEU GLU HIS GLU ASP TYR ASP MET MET ARG PRO MET ASP SEQRES 40 A 513 ILE THR ASP PRO HIS LYS HET CU1 A1511 1 HET CU1 A1512 1 HET CU1 A1513 1 HET C1O A1514 2 HET OXY A1515 2 HET GOL A1516 6 HET GOL A1517 6 HET EBS A1518 32 HETNAM CU1 COPPER (I) ION HETNAM C1O CU-O LINKAGE HETNAM OXY OXYGEN MOLECULE HETNAM GOL GLYCEROL HETNAM EBS 3-ETHYL-2-[(2Z)-2-(3-ETHYL-6-SULFO-1,3-BENZOTHIAZOL- HETNAM 2 EBS 2(3H)-YLIDENE)HYDRAZINO]-6-SULFO-3H-1,3-BENZOTHIAZOL- HETNAM 3 EBS 1-IUM HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CU1 3(CU 1+) FORMUL 5 C1O CU O FORMUL 6 OXY O2 FORMUL 7 GOL 2(C3 H8 O3) FORMUL 9 EBS C18 H18 N4 O6 S4 FORMUL 10 HOH *238(H2 O) HELIX 1 1 PRO A 112 ASP A 116 5 5 HELIX 2 2 SER A 124 GLU A 128 5 5 HELIX 3 3 LEU A 159 ALA A 166 1 8 HELIX 4 4 ASP A 176 LYS A 183 5 8 HELIX 5 5 SER A 186 GLU A 188 5 3 HELIX 6 6 TYR A 358 GLN A 362 5 5 HELIX 7 7 ASP A 437 GLY A 445 1 9 HELIX 8 8 PRO A 457 LYS A 461 5 5 HELIX 9 9 ILE A 494 ASP A 499 1 6 SHEET 1 AA 4 GLN A 20 GLN A 21 0 SHEET 2 AA 4 THR A 26 HIS A 37 -1 N TYR A 27 O GLN A 20 SHEET 3 AA 4 VAL A 68 ASN A 74 1 O TYR A 69 N TYR A 28 SHEET 4 AA 4 VAL A 138 TYR A 141 -1 O TYR A 139 N VAL A 70 SHEET 1 AB 3 GLN A 20 GLN A 21 0 SHEET 2 AB 3 THR A 26 HIS A 37 -1 N TYR A 27 O GLN A 20 SHEET 3 AB 3 THR A 46 TYR A 51 -1 O THR A 46 N HIS A 37 SHEET 1 AC 4 ILE A 60 LYS A 63 0 SHEET 2 AC 4 VAL A 169 HIS A 175 1 O ALA A 171 N ILE A 60 SHEET 3 AC 4 ALA A 148 ASP A 154 -1 O ALA A 148 N ILE A 174 SHEET 4 AC 4 VAL A 104 HIS A 107 -1 O HIS A 105 N HIS A 153 SHEET 1 AD 7 LYS A 238 VAL A 239 0 SHEET 2 AD 7 THR A 232 VAL A 235 -1 O VAL A 235 N LYS A 238 SHEET 3 AD 7 ASP A 190 ARG A 198 -1 O THR A 196 N LEU A 234 SHEET 4 AD 7 LYS A 249 ASN A 256 1 O ARG A 251 N VAL A 191 SHEET 5 AD 7 ARG A 299 ASP A 305 -1 O TYR A 300 N VAL A 254 SHEET 6 AD 7 PHE A 273 SER A 278 -1 O ILE A 274 N ILE A 303 SHEET 7 AD 7 GLY A 281 LEU A 289 -1 O GLY A 281 N SER A 278 SHEET 1 AE 5 TYR A 242 GLU A 244 0 SHEET 2 AE 5 ASN A 333 ARG A 338 1 O GLN A 336 N LEU A 243 SHEET 3 AE 5 SER A 313 ASN A 318 -1 O ILE A 314 N PHE A 337 SHEET 4 AE 5 TYR A 263 LEU A 267 -1 O SER A 266 N ALA A 317 SHEET 5 AE 5 SER A 291 LEU A 294 -1 O PHE A 292 N LEU A 265 SHEET 1 AF 5 PRO A 384 LEU A 388 0 SHEET 2 AF 5 ILE A 366 GLN A 378 -1 O ALA A 375 N LEU A 387 SHEET 3 AF 5 THR A 406 ASN A 413 1 O THR A 406 N GLN A 367 SHEET 4 AF 5 GLU A 473 THR A 480 -1 O GLU A 473 N ASN A 413 SHEET 5 AF 5 PHE A 428 PRO A 435 -1 O ARG A 429 N ALA A 478 SHEET 1 AG 4 THR A 466 ALA A 469 0 SHEET 2 AG 4 HIS A 419 LEU A 423 -1 O HIS A 419 N ALA A 469 SHEET 3 AG 4 GLY A 486 CYS A 492 -1 O HIS A 491 N HIS A 422 SHEET 4 AG 4 MET A 503 ILE A 508 -1 O ARG A 504 N TRP A 490 SSBOND 1 CYS A 229 CYS A 322 1555 1555 2.03 LINK OE1 GLU A 310 O1 GOL A1517 6665 1555 2.00 LINK ND1 HIS A 107 CU CU1 A1512 1555 1555 2.09 LINK NE2 HIS A 153 CU CU1 A1512 1555 1555 2.26 LINK NE2 HIS A 155 CU CU1 A1513 1555 1555 2.48 LINK ND1 HIS A 419 CU CU1 A1511 1555 1555 2.07 LINK NE2 HIS A 424 CU CU1 A1513 1555 1555 2.04 LINK NE2 HIS A 491 CU CU1 A1513 1555 1555 2.08 LINK SG CYS A 492 CU CU1 A1511 1555 1555 2.15 LINK NE2 HIS A 493 CU CU1 A1512 1555 1555 2.23 LINK ND1 HIS A 497 CU CU1 A1511 1555 1555 2.10 CISPEP 1 PHE A 55 PRO A 56 0 -0.06 CISPEP 2 ASN A 221 PRO A 222 0 0.04 CISPEP 3 GLY A 482 PRO A 483 0 0.06 SITE 1 AC1 4 HIS A 419 CYS A 492 HIS A 497 MET A 502 SITE 1 AC2 4 HIS A 107 HIS A 153 HIS A 493 OXY A1515 SITE 1 AC3 5 HIS A 155 HIS A 422 HIS A 424 HIS A 491 SITE 2 AC3 5 OXY A1515 SITE 1 AC4 7 HIS A 105 HIS A 107 GLY A 108 HIS A 422 SITE 2 AC4 7 HIS A 424 HOH A2213 HOH A2235 SITE 1 AC5 7 HIS A 153 HIS A 155 HIS A 491 HIS A 493 SITE 2 AC5 7 GLU A 498 CU1 A1512 CU1 A1513 SITE 1 AC6 13 PRO A 226 ALA A 227 THR A 260 GLY A 321 SITE 2 AC6 13 CYS A 322 GLY A 323 LEU A 386 THR A 415 SITE 3 AC6 13 GLY A 417 HIS A 419 HIS A 497 HOH A2152 SITE 4 AC6 13 HOH A2238 SITE 1 AC7 7 ASP A 113 ASP A 114 TYR A 118 ALA A 121 SITE 2 AC7 7 TYR A 133 LYS A 135 HOH A2236 SITE 1 AC8 8 ARG A 136 GLU A 137 VAL A 138 PRO A 247 SITE 2 AC8 8 THR A 307 GLU A 310 LEU A 343 HOH A2237 CRYST1 102.278 102.278 136.247 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009777 0.005645 0.000000 0.00000 SCALE2 0.000000 0.011290 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007340 0.00000