PDB Short entry for 1OS0 HEADER HYDROLASE/HYDROLASE INHIBITOR 18-MAR-03 1OS0 TITLE THERMOLYSIN WITH AN ALPHA-AMINO PHOSPHINIC INHIBITOR CAVEAT 1OS0 THE BOND LENGTHS OF C1-S AND C2-S IN DMS ARE TOO LONG COMPND MOL_ID: 1; COMPND 2 MOLECULE: THERMOLYSIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: THERMOSTABLE NEUTRAL PROTEINASE; COMPND 5 EC: 3.4.24.27 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS THERMOPROTEOLYTICUS; SOURCE 3 ORGANISM_TAXID: 1427 KEYWDS THERMOLYSIN, ALPHA-AMINO PHOSPHINIC COMPOUND, NEPRYLISIN, HYDROLASE, KEYWDS 2 METAL-BINDING, METALLOPROTEASE, PROTEASE, SECRETED, ZYMOGEN, KEYWDS 3 HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.SELKTI,A.TOMAS,T.PRANGE REVDAT 6 16-AUG-23 1OS0 1 REMARK LINK REVDAT 5 11-OCT-17 1OS0 1 REMARK REVDAT 4 13-JUL-11 1OS0 1 VERSN REVDAT 3 24-FEB-09 1OS0 1 VERSN REVDAT 2 23-DEC-03 1OS0 1 JRNL REVDAT 1 25-MAR-03 1OS0 0 SPRSDE 25-MAR-03 1OS0 1NO0 JRNL AUTH M.SELKTI,A.TOMAS,J.F.GAUCHER,T.PRANGE,M.C.FOURNIE-ZALUSKI, JRNL AUTH 2 H.CHEN,B.P.ROQUES JRNL TITL INTERACTIONS OF A NEW ALPHA-AMINOPHOSPHINIC DERIVATIVE JRNL TITL 2 INSIDE THE ACTIVE SITE OF TLN (THERMOLYSIN): A MODEL FOR JRNL TITL 3 ZINC-METALLOENDOPEPTIDASE INHIBITION. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 59 1200 2003 JRNL REFN ISSN 0907-4449 JRNL PMID 12832763 JRNL DOI 10.1107/S0907444903010060 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.F.GAUCHER,M.SELKTI,G.TIRABOSCHI,T.PRANGE,B.P.ROQUES, REMARK 1 AUTH 2 A.TOMAS,M.C.FOURNIE-ZALUSKI REMARK 1 TITL CRYSTAL STRUCTURES OF ALPHA-MERCAPTOACYLDIPEPTIDES IN THE REMARK 1 TITL 2 THERMOLYSIN ACTIVE SITE: STRUCTURAL PARAMETERS FOR A ZN REMARK 1 TITL 3 MONODENTATION OR BIDENTATION IN METALLOENDOPEPTIDASES REMARK 1 REF BIOCHEMISTRY V. 38 12569 1999 REMARK 1 REFN ISSN 0006-2960 REMARK 1 DOI 10.1021/BI991043Z REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 4.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.146 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.179 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 2123 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 21413 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : NULL REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.136 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.176 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 1903 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 19094 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2432 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 44 REMARK 3 SOLVENT ATOMS : 186 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 2659.1 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 2294.3 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 0 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 10652 REMARK 3 NUMBER OF RESTRAINTS : 10250 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.021 REMARK 3 ANGLE DISTANCES (A) : 0.022 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.270 REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.028 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.049 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.103 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : NULL REMARK 3 SIMILAR ADP COMPONENTS (A**2) : NULL REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH AND HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1OS0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-MAR-03. REMARK 100 THE DEPOSITION ID IS D_1000018610. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-AUG-02 REMARK 200 TEMPERATURE (KELVIN) : 277.0 REMARK 200 PH : 8.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LURE REMARK 200 BEAMLINE : DW32 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.972 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : CURVATED MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA - TRUNCATE, CCP4 (SCALA, REMARK 200 TRUNCATE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20940 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 22.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 4.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 70.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.17800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1LNF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: DMSO, CACL2, PH 8.00, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.08300 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 88.16600 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 66.12450 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 110.20750 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 22.04150 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 44.08300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 88.16600 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 110.20750 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 66.12450 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 22.04150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -205.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 46.89100 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 81.21759 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -22.04150 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 285 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 25 83.34 -165.30 REMARK 500 THR A 26 -56.67 76.96 REMARK 500 SER A 92 -169.10 61.63 REMARK 500 SER A 107 -158.74 58.86 REMARK 500 ASN A 111 53.63 -95.19 REMARK 500 GLN A 128 -51.75 -123.05 REMARK 500 THR A 152 -107.74 -110.89 REMARK 500 ASN A 159 -143.41 51.46 REMARK 500 THR A 194 75.36 38.46 REMARK 500 ASP A 207 79.12 -151.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 603 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 57 OD1 REMARK 620 2 ASP A 57 OD2 53.7 REMARK 620 3 ASP A 59 OD1 122.7 69.8 REMARK 620 4 GLN A 61 O 100.4 91.0 88.3 REMARK 620 5 HOH A 468 O 82.5 91.8 91.3 176.9 REMARK 620 6 HOH A 526 O 82.8 135.1 154.5 86.2 92.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 138 OD2 REMARK 620 2 GLU A 177 OE1 80.2 REMARK 620 3 GLU A 177 OE2 127.1 47.7 REMARK 620 4 ASP A 185 OD1 161.3 118.5 71.3 REMARK 620 5 GLU A 187 O 86.0 147.7 142.0 78.0 REMARK 620 6 GLU A 190 OE1 83.8 127.6 118.1 83.7 79.1 REMARK 620 7 GLU A 190 OE2 100.7 83.8 69.7 81.9 127.6 50.8 REMARK 620 8 HOH A 467 O 100.8 79.2 80.3 84.4 74.9 153.1 149.7 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 600 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 142 NE2 REMARK 620 2 HIS A 146 NE2 101.3 REMARK 620 3 GLU A 166 OE2 126.6 95.6 REMARK 620 4 0PQ A 605 O1P 114.2 125.1 95.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 177 OE2 REMARK 620 2 ASN A 183 O 90.6 REMARK 620 3 ASP A 185 OD2 91.9 90.3 REMARK 620 4 GLU A 190 OE2 86.1 173.8 84.5 REMARK 620 5 HOH A 414 O 87.6 92.5 177.1 92.6 REMARK 620 6 HOH A 528 O 169.4 91.5 98.5 92.8 81.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 604 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 193 O REMARK 620 2 THR A 194 O 76.9 REMARK 620 3 THR A 194 OG1 78.3 70.5 REMARK 620 4 ILE A 197 O 153.4 81.2 108.4 REMARK 620 5 ASP A 200 OD1 128.2 131.8 75.7 78.0 REMARK 620 6 HOH A 530 O 85.9 152.7 126.8 108.0 75.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0PQ A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 350 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1KEI RELATED DB: PDB REMARK 900 THERMOLYSIN, NATIVE, HIGH RESOLUTION REMARK 900 RELATED ID: 2TMN RELATED DB: PDB REMARK 900 THERMOLYSIN COMPLEX WITH N-PHOSPHORYL-L-LEUCINAMIDE (P-LEU-NH2) REMARK 900 RELATED ID: 1QF0 RELATED DB: PDB REMARK 900 THERMOLYSIN COMPLEXED WITH (2-SULPHANYL-3- PHENYLPROPANOYL)-PHE-TYR REMARK 900 RELATED ID: 1QF1 RELATED DB: PDB REMARK 900 THERMOLYSIN COMPLEXED WITH (2- SULPHANYLHEPTANOYL)-PHE-ALA REMARK 900 RELATED ID: 1QF2 RELATED DB: PDB REMARK 900 THERMOLYSIN COMPLEXED WITH (2-SULPHANYL-3- PHENYLPROPANOYL)-GLY-(5- REMARK 900 PHENYLPROLINE) REMARK 900 RELATED ID: 1TLP RELATED DB: PDB REMARK 900 THERMOLYSIN COMPLEX WITH PHOSPHORAMIDON REMARK 999 REMARK 999 SEQUENCE REMARK 999 SEQUENCE CONFLICT IN UNP ENTRY P00800 DBREF 1OS0 A 1 316 UNP P00800 THER_BACTH 233 548 SEQADV 1OS0 ASP A 37 UNP P00800 ASN 269 SEE REMARK 999 SEQADV 1OS0 GLU A 119 UNP P00800 GLN 351 SEE REMARK 999 SEQRES 1 A 316 ILE THR GLY THR SER THR VAL GLY VAL GLY ARG GLY VAL SEQRES 2 A 316 LEU GLY ASP GLN LYS ASN ILE ASN THR THR TYR SER THR SEQRES 3 A 316 TYR TYR TYR LEU GLN ASP ASN THR ARG GLY ASP GLY ILE SEQRES 4 A 316 PHE THR TYR ASP ALA LYS TYR ARG THR THR LEU PRO GLY SEQRES 5 A 316 SER LEU TRP ALA ASP ALA ASP ASN GLN PHE PHE ALA SER SEQRES 6 A 316 TYR ASP ALA PRO ALA VAL ASP ALA HIS TYR TYR ALA GLY SEQRES 7 A 316 VAL THR TYR ASP TYR TYR LYS ASN VAL HIS ASN ARG LEU SEQRES 8 A 316 SER TYR ASP GLY ASN ASN ALA ALA ILE ARG SER SER VAL SEQRES 9 A 316 HIS TYR SER GLN GLY TYR ASN ASN ALA PHE TRP ASN GLY SEQRES 10 A 316 SER GLU MET VAL TYR GLY ASP GLY ASP GLY GLN THR PHE SEQRES 11 A 316 ILE PRO LEU SER GLY GLY ILE ASP VAL VAL ALA HIS GLU SEQRES 12 A 316 LEU THR HIS ALA VAL THR ASP TYR THR ALA GLY LEU ILE SEQRES 13 A 316 TYR GLN ASN GLU SER GLY ALA ILE ASN GLU ALA ILE SER SEQRES 14 A 316 ASP ILE PHE GLY THR LEU VAL GLU PHE TYR ALA ASN LYS SEQRES 15 A 316 ASN PRO ASP TRP GLU ILE GLY GLU ASP VAL TYR THR PRO SEQRES 16 A 316 GLY ILE SER GLY ASP SER LEU ARG SER MET SER ASP PRO SEQRES 17 A 316 ALA LYS TYR GLY ASP PRO ASP HIS TYR SER LYS ARG TYR SEQRES 18 A 316 THR GLY THR GLN ASP ASN GLY GLY VAL HIS ILE ASN SER SEQRES 19 A 316 GLY ILE ILE ASN LYS ALA ALA TYR LEU ILE SER GLN GLY SEQRES 20 A 316 GLY THR HIS TYR GLY VAL SER VAL VAL GLY ILE GLY ARG SEQRES 21 A 316 ASP LYS LEU GLY LYS ILE PHE TYR ARG ALA LEU THR GLN SEQRES 22 A 316 TYR LEU THR PRO THR SER ASN PHE SER GLN LEU ARG ALA SEQRES 23 A 316 ALA ALA VAL GLN SER ALA THR ASP LEU TYR GLY SER THR SEQRES 24 A 316 SER GLN GLU VAL ALA SER VAL LYS GLN ALA PHE ASP ALA SEQRES 25 A 316 VAL GLY VAL LYS HET ZN A 600 1 HET CA A 601 1 HET CA A 602 1 HET CA A 603 1 HET CA A 604 1 HET 0PQ A 605 35 HET DMS A 350 4 HETNAM ZN ZINC ION HETNAM CA CALCIUM ION HETNAM 0PQ N-{(2R)-3-[(S)-[(1R)-1-AMINO-2-PHENYLETHYL](HYDROXY) HETNAM 2 0PQ PHOSPHORYL]-2-BENZYLPROPANOYL}-L-PHENYLALANINE HETNAM DMS DIMETHYL SULFOXIDE FORMUL 2 ZN ZN 2+ FORMUL 3 CA 4(CA 2+) FORMUL 7 0PQ C27 H31 N2 O5 P FORMUL 8 DMS C2 H6 O S FORMUL 9 HOH *186(H2 O) HELIX 1 1 ALA A 64 TYR A 66 5 3 HELIX 2 2 ASP A 67 ASN A 89 1 23 HELIX 3 3 PRO A 132 GLY A 135 5 4 HELIX 4 4 GLY A 136 THR A 152 1 17 HELIX 5 5 GLN A 158 ALA A 180 1 23 HELIX 6 6 ASP A 207 GLY A 212 5 6 HELIX 7 7 HIS A 216 ARG A 220 5 5 HELIX 8 8 THR A 224 VAL A 230 1 7 HELIX 9 9 ASN A 233 GLY A 247 1 15 HELIX 10 10 GLY A 259 TYR A 274 1 16 HELIX 11 11 ASN A 280 GLY A 297 1 18 HELIX 12 12 SER A 300 VAL A 313 1 14 SHEET 1 A 5 ALA A 56 ASP A 57 0 SHEET 2 A 5 TYR A 28 TYR A 29 -1 N TYR A 28 O ASP A 57 SHEET 3 A 5 GLN A 17 TYR A 24 -1 N THR A 23 O TYR A 29 SHEET 4 A 5 THR A 4 ARG A 11 -1 N GLY A 8 O ILE A 20 SHEET 5 A 5 GLN A 61 PHE A 62 1 O PHE A 62 N VAL A 9 SHEET 1 B 5 ALA A 113 TRP A 115 0 SHEET 2 B 5 MET A 120 GLY A 123 -1 O VAL A 121 N PHE A 114 SHEET 3 B 5 ILE A 100 TYR A 106 1 N SER A 103 O MET A 120 SHEET 4 B 5 ILE A 39 ASP A 43 1 N TYR A 42 O SER A 102 SHEET 5 B 5 GLN A 31 ASP A 32 -1 N ASP A 32 O ILE A 39 SHEET 1 C 5 ALA A 113 TRP A 115 0 SHEET 2 C 5 MET A 120 GLY A 123 -1 O VAL A 121 N PHE A 114 SHEET 3 C 5 ILE A 100 TYR A 106 1 N SER A 103 O MET A 120 SHEET 4 C 5 ILE A 39 ASP A 43 1 N TYR A 42 O SER A 102 SHEET 5 C 5 SER A 53 LEU A 54 -1 O SER A 53 N ASP A 43 SHEET 1 D 2 GLU A 187 ILE A 188 0 SHEET 2 D 2 ARG A 203 SER A 204 -1 O ARG A 203 N ILE A 188 SHEET 1 E 2 GLY A 248 HIS A 250 0 SHEET 2 E 2 VAL A 253 VAL A 255 -1 O VAL A 255 N GLY A 248 LINK OD1 ASP A 57 CA CA A 603 1555 1555 2.32 LINK OD2 ASP A 57 CA CA A 603 1555 1555 2.54 LINK OD1 ASP A 59 CA CA A 603 1555 1555 2.42 LINK O GLN A 61 CA CA A 603 1555 1555 2.28 LINK OD2 ASP A 138 CA CA A 601 1555 1555 2.44 LINK NE2 HIS A 142 ZN ZN A 600 1555 1555 2.03 LINK NE2 HIS A 146 ZN ZN A 600 1555 1555 2.02 LINK OE2 GLU A 166 ZN ZN A 600 1555 1555 1.94 LINK OE1 GLU A 177 CA CA A 601 1555 1555 2.47 LINK OE2 GLU A 177 CA CA A 601 1555 1555 2.87 LINK OE2 GLU A 177 CA CA A 602 1555 1555 2.32 LINK O ASN A 183 CA CA A 602 1555 1555 2.38 LINK OD1 ASP A 185 CA CA A 601 1555 1555 2.51 LINK OD2 ASP A 185 CA CA A 602 1555 1555 2.20 LINK O GLU A 187 CA CA A 601 1555 1555 2.33 LINK OE1 GLU A 190 CA CA A 601 1555 1555 2.55 LINK OE2 GLU A 190 CA CA A 601 1555 1555 2.57 LINK OE2 GLU A 190 CA CA A 602 1555 1555 2.25 LINK O TYR A 193 CA CA A 604 1555 1555 2.35 LINK O THR A 194 CA CA A 604 1555 1555 2.40 LINK OG1 THR A 194 CA CA A 604 1555 1555 2.28 LINK O ILE A 197 CA CA A 604 1555 1555 2.28 LINK OD1 ASP A 200 CA CA A 604 1555 1555 2.27 LINK O HOH A 414 CA CA A 602 1555 1555 2.39 LINK O HOH A 467 CA CA A 601 1555 1555 2.52 LINK O HOH A 468 CA CA A 603 1555 1555 2.39 LINK O HOH A 526 CA CA A 603 1555 1555 2.44 LINK O HOH A 528 CA CA A 602 1555 1555 2.27 LINK O HOH A 530 CA CA A 604 1555 1555 2.48 LINK ZN ZN A 600 O1P 0PQ A 605 1555 1555 1.90 CISPEP 1 LEU A 50 PRO A 51 0 2.17 SITE 1 AC1 4 HIS A 142 HIS A 146 GLU A 166 0PQ A 605 SITE 1 AC2 6 ASP A 138 GLU A 177 ASP A 185 GLU A 187 SITE 2 AC2 6 GLU A 190 HOH A 467 SITE 1 AC3 6 GLU A 177 ASN A 183 ASP A 185 GLU A 190 SITE 2 AC3 6 HOH A 414 HOH A 528 SITE 1 AC4 5 ASP A 57 ASP A 59 GLN A 61 HOH A 468 SITE 2 AC4 5 HOH A 526 SITE 1 AC5 5 TYR A 193 THR A 194 ILE A 197 ASP A 200 SITE 2 AC5 5 HOH A 530 SITE 1 AC6 19 TYR A 110 ASN A 111 ASN A 112 ALA A 113 SITE 2 AC6 19 PHE A 114 VAL A 139 HIS A 142 GLU A 143 SITE 3 AC6 19 HIS A 146 TYR A 157 GLU A 166 ILE A 188 SITE 4 AC6 19 LEU A 202 ARG A 203 HIS A 231 HOH A 470 SITE 5 AC6 19 HOH A 493 HOH A 586 ZN A 600 SITE 1 AC7 5 TYR A 66 HIS A 216 SER A 218 TYR A 251 SITE 2 AC7 5 HOH A 563 CRYST1 93.782 93.782 132.249 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010663 0.006156 0.000000 0.00000 SCALE2 0.000000 0.012313 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007561 0.00000