PDB Short entry for 1P26 HEADER DNA 14-APR-03 1P26 TITLE CRYSTAL STRUCTURE OF ZINC(II)-D(GGCGCC)2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*GP*GP*CP*GP*CP*C)-3'; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: SYNTHESIZED BY ALPHADNA (QUEBEC, PQ, CANADA) KEYWDS B-DNA, ZINC BINDING, DNA EXPDTA X-RAY DIFFRACTION AUTHOR S.L.LABIUK,L.T.DELBAERE,J.S.LEE REVDAT 4 03-APR-24 1P26 1 REMARK REVDAT 3 14-FEB-24 1P26 1 REMARK LINK REVDAT 2 24-FEB-09 1P26 1 VERSN REVDAT 1 09-DEC-03 1P26 0 JRNL AUTH S.L.LABIUK,L.T.DELBAERE,J.S.LEE JRNL TITL COBALT(II), NICKEL(II) AND ZINC(II) DO NOT BIND TO JRNL TITL 2 INTRA-HELICAL N(7) GUANINE POSITIONS IN THE B-FORM CRYSTAL JRNL TITL 3 STRUCTURE OF D(GGCGCC) JRNL REF J.BIOL.INORG.CHEM. V. 8 715 2003 JRNL REFN ISSN 0949-8257 JRNL PMID 14505075 JRNL DOI 10.1007/S00775-003-0473-4 REMARK 2 REMARK 2 RESOLUTION. 2.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 2608 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.000 REMARK 3 FREE R VALUE TEST SET COUNT : 258 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 600 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 25 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.015 REMARK 3 BOND ANGLES (DEGREES) : 3.930 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 32.33 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.139 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : GROUPED B-VALUES REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1P26 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-APR-03. REMARK 100 THE DEPOSITION ID IS D_1000018918. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-AUG-02 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 3115 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.920 REMARK 200 RESOLUTION RANGE LOW (A) : 26.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.60000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NDB ENTRY BD0040 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: DNA, TAPS-HCL, ZNCL2, MPD, PH 8.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 27.64000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.40000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.40000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 13.82000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.40000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.40000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 41.46000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.40000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.40000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 13.82000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.40000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.40000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 41.46000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 27.64000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 55.28000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG A 1 C5' DG A 1 C4' 0.080 REMARK 500 DC A 3 C5' DC A 3 C4' -0.067 REMARK 500 DC C 15 P DC C 15 O5' 0.076 REMARK 500 DC D 21 C5' DC D 21 C4' -0.067 REMARK 500 DG D 22 P DG D 22 O5' 0.081 REMARK 500 DG D 22 C2 DG D 22 N3 0.049 REMARK 500 DC E 30 P DC E 30 O5' 0.069 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG A 1 O4' - C1' - N9 ANGL. DEV. = 4.9 DEGREES REMARK 500 DG A 1 C8 - N9 - C4 ANGL. DEV. = -2.5 DEGREES REMARK 500 DG A 2 N9 - C1' - C2' ANGL. DEV. = 8.5 DEGREES REMARK 500 DG A 2 N7 - C8 - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DC A 3 P - O5' - C5' ANGL. DEV. = -12.6 DEGREES REMARK 500 DC A 3 C1' - O4' - C4' ANGL. DEV. = 4.3 DEGREES REMARK 500 DC A 3 O4' - C1' - C2' ANGL. DEV. = -5.9 DEGREES REMARK 500 DC A 3 O4' - C1' - N1 ANGL. DEV. = 6.1 DEGREES REMARK 500 DC A 3 N1 - C2 - O2 ANGL. DEV. = 5.1 DEGREES REMARK 500 DC A 3 N3 - C2 - O2 ANGL. DEV. = -5.7 DEGREES REMARK 500 DC A 3 C3' - O3' - P ANGL. DEV. = 8.8 DEGREES REMARK 500 DG A 4 O4' - C1' - N9 ANGL. DEV. = 3.8 DEGREES REMARK 500 DG A 4 C3' - O3' - P ANGL. DEV. = 7.3 DEGREES REMARK 500 DC A 5 O4' - C1' - N1 ANGL. DEV. = 3.0 DEGREES REMARK 500 DC A 5 N1 - C2 - O2 ANGL. DEV. = 4.1 DEGREES REMARK 500 DC A 6 O4' - C1' - N1 ANGL. DEV. = 14.6 DEGREES REMARK 500 DG B 7 O4' - C1' - N9 ANGL. DEV. = 6.2 DEGREES REMARK 500 DG B 7 C8 - N9 - C4 ANGL. DEV. = -3.0 DEGREES REMARK 500 DC B 9 P - O5' - C5' ANGL. DEV. = -12.1 DEGREES REMARK 500 DC B 9 O4' - C1' - N1 ANGL. DEV. = 7.7 DEGREES REMARK 500 DG B 10 P - O5' - C5' ANGL. DEV. = -9.8 DEGREES REMARK 500 DG B 10 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG B 10 N7 - C8 - N9 ANGL. DEV. = 3.2 DEGREES REMARK 500 DG B 10 C8 - N9 - C4 ANGL. DEV. = -2.6 DEGREES REMARK 500 DC B 11 N1 - C2 - O2 ANGL. DEV. = 4.9 DEGREES REMARK 500 DC B 11 N3 - C2 - O2 ANGL. DEV. = -5.1 DEGREES REMARK 500 DC B 12 O4' - C1' - N1 ANGL. DEV. = 7.0 DEGREES REMARK 500 DC B 12 N1 - C2 - O2 ANGL. DEV. = 5.0 DEGREES REMARK 500 DG C 13 N7 - C8 - N9 ANGL. DEV. = 3.6 DEGREES REMARK 500 DG C 13 C8 - N9 - C4 ANGL. DEV. = -2.5 DEGREES REMARK 500 DG C 14 O4' - C1' - N9 ANGL. DEV. = 4.0 DEGREES REMARK 500 DG C 14 C5 - N7 - C8 ANGL. DEV. = -4.0 DEGREES REMARK 500 DG C 14 N7 - C8 - N9 ANGL. DEV. = 4.6 DEGREES REMARK 500 DG C 14 C8 - N9 - C4 ANGL. DEV. = -2.9 DEGREES REMARK 500 DG C 14 C3' - O3' - P ANGL. DEV. = 8.5 DEGREES REMARK 500 DC C 15 O4' - C1' - N1 ANGL. DEV. = 15.1 DEGREES REMARK 500 DC C 15 N1 - C2 - O2 ANGL. DEV. = 5.3 DEGREES REMARK 500 DG C 16 O4' - C1' - N9 ANGL. DEV. = 6.1 DEGREES REMARK 500 DG C 16 N7 - C8 - N9 ANGL. DEV. = 3.2 DEGREES REMARK 500 DG C 16 C8 - N9 - C4 ANGL. DEV. = -2.9 DEGREES REMARK 500 DC C 18 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 DG D 19 C8 - N9 - C4 ANGL. DEV. = -3.1 DEGREES REMARK 500 DG D 20 O4' - C1' - N9 ANGL. DEV. = 3.5 DEGREES REMARK 500 DG D 20 C5 - N7 - C8 ANGL. DEV. = -3.4 DEGREES REMARK 500 DG D 20 C5 - C6 - O6 ANGL. DEV. = -4.0 DEGREES REMARK 500 DG D 22 P - O5' - C5' ANGL. DEV. = -14.9 DEGREES REMARK 500 DG D 22 C5 - N7 - C8 ANGL. DEV. = -3.6 DEGREES REMARK 500 DG D 22 N7 - C8 - N9 ANGL. DEV. = 4.2 DEGREES REMARK 500 DC D 23 P - O5' - C5' ANGL. DEV. = -10.3 DEGREES REMARK 500 DC D 23 N1 - C2 - O2 ANGL. DEV. = 6.9 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 70 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG A 1 N7 REMARK 620 2 HOH A 201 O 90.5 REMARK 620 3 HOH A 202 O 89.6 84.9 REMARK 620 4 HOH A 203 O 89.5 171.3 86.4 REMARK 620 5 HOH A 204 O 90.0 92.7 177.6 96.0 REMARK 620 6 HOH A 205 O 179.6 89.5 90.0 90.5 90.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 102 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG B 7 N7 REMARK 620 2 HOH B 206 O 89.6 REMARK 620 3 HOH B 207 O 90.8 87.4 REMARK 620 4 HOH B 208 O 90.3 175.7 88.3 REMARK 620 5 HOH B 209 O 90.5 99.7 172.7 84.6 REMARK 620 6 HOH B 210 O 179.4 89.9 89.0 90.3 89.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 103 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG C 13 N7 REMARK 620 2 HOH C 211 O 91.5 REMARK 620 3 HOH C 212 O 90.1 93.7 REMARK 620 4 HOH C 213 O 89.5 179.0 86.6 REMARK 620 5 HOH C 214 O 89.2 88.1 178.0 91.6 REMARK 620 6 HOH C 215 O 178.4 87.5 88.7 91.5 91.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 104 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG D 19 N7 REMARK 620 2 HOH D 216 O 91.0 REMARK 620 3 HOH D 217 O 89.1 91.9 REMARK 620 4 HOH D 218 O 89.3 174.4 93.7 REMARK 620 5 HOH D 219 O 91.4 88.5 179.4 85.9 REMARK 620 6 HOH D 220 O 179.3 88.6 90.3 91.1 89.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN E 105 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG E 25 N7 REMARK 620 2 HOH E 221 O 89.1 REMARK 620 3 HOH E 222 O 89.1 99.6 REMARK 620 4 HOH E 223 O 91.2 169.7 90.7 REMARK 620 5 HOH E 224 O 91.8 84.8 175.6 84.9 REMARK 620 6 HOH E 225 O 177.9 92.3 92.3 87.2 86.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN E 105 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1P24 RELATED DB: PDB REMARK 900 RELATED ID: 1P25 RELATED DB: PDB DBREF 1P26 A 1 6 PDB 1P26 1P26 1 6 DBREF 1P26 B 7 12 PDB 1P26 1P26 7 12 DBREF 1P26 C 13 18 PDB 1P26 1P26 13 18 DBREF 1P26 D 19 24 PDB 1P26 1P26 19 24 DBREF 1P26 E 25 30 PDB 1P26 1P26 25 30 SEQRES 1 A 6 DG DG DC DG DC DC SEQRES 1 B 6 DG DG DC DG DC DC SEQRES 1 C 6 DG DG DC DG DC DC SEQRES 1 D 6 DG DG DC DG DC DC SEQRES 1 E 6 DG DG DC DG DC DC HET ZN A 101 1 HET ZN B 102 1 HET ZN C 103 1 HET ZN D 104 1 HET ZN E 105 1 HETNAM ZN ZINC ION FORMUL 6 ZN 5(ZN 2+) FORMUL 11 HOH *25(H2 O) LINK N7 DG A 1 ZN ZN A 101 1555 1555 2.10 LINK ZN ZN A 101 O HOH A 201 1555 1555 2.11 LINK ZN ZN A 101 O HOH A 202 1555 1555 2.10 LINK ZN ZN A 101 O HOH A 203 1555 1555 2.10 LINK ZN ZN A 101 O HOH A 204 1555 1555 2.09 LINK ZN ZN A 101 O HOH A 205 1555 1555 2.09 LINK N7 DG B 7 ZN ZN B 102 1555 1555 2.08 LINK ZN ZN B 102 O HOH B 206 1555 1555 2.10 LINK ZN ZN B 102 O HOH B 207 1555 1555 2.09 LINK ZN ZN B 102 O HOH B 208 1555 1555 2.09 LINK ZN ZN B 102 O HOH B 209 1555 1555 2.10 LINK ZN ZN B 102 O HOH B 210 1555 1555 2.10 LINK N7 DG C 13 ZN ZN C 103 1555 1555 2.09 LINK ZN ZN C 103 O HOH C 211 1555 1555 2.09 LINK ZN ZN C 103 O HOH C 212 1555 1555 2.10 LINK ZN ZN C 103 O HOH C 213 1555 1555 2.11 LINK ZN ZN C 103 O HOH C 214 1555 1555 2.10 LINK ZN ZN C 103 O HOH C 215 1555 1555 2.10 LINK N7 DG D 19 ZN ZN D 104 1555 1555 2.10 LINK ZN ZN D 104 O HOH D 216 1555 1555 2.09 LINK ZN ZN D 104 O HOH D 217 1555 1555 2.10 LINK ZN ZN D 104 O HOH D 218 1555 1555 2.11 LINK ZN ZN D 104 O HOH D 219 1555 1555 2.09 LINK ZN ZN D 104 O HOH D 220 1555 1555 2.09 LINK N7 DG E 25 ZN ZN E 105 1555 1555 2.12 LINK ZN ZN E 105 O HOH E 221 1555 1555 2.11 LINK ZN ZN E 105 O HOH E 222 1555 1555 2.10 LINK ZN ZN E 105 O HOH E 223 1555 1555 2.10 LINK ZN ZN E 105 O HOH E 224 1555 1555 2.12 LINK ZN ZN E 105 O HOH E 225 1555 1555 2.09 SITE 1 AC1 6 DG A 1 HOH A 201 HOH A 202 HOH A 203 SITE 2 AC1 6 HOH A 204 HOH A 205 SITE 1 AC2 6 DG B 7 HOH B 206 HOH B 207 HOH B 208 SITE 2 AC2 6 HOH B 209 HOH B 210 SITE 1 AC3 6 DG C 13 HOH C 211 HOH C 212 HOH C 213 SITE 2 AC3 6 HOH C 214 HOH C 215 SITE 1 AC4 7 DC A 5 DG D 19 HOH D 216 HOH D 217 SITE 2 AC4 7 HOH D 218 HOH D 219 HOH D 220 SITE 1 AC5 7 DC A 3 DG E 25 HOH E 221 HOH E 222 SITE 2 AC5 7 HOH E 223 HOH E 224 HOH E 225 CRYST1 68.800 68.800 55.280 90.00 90.00 90.00 P 41 21 2 40 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014535 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014535 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018090 0.00000