PDB Short entry for 1PE7 HEADER HYDROLASE 21-MAY-03 1PE7 TITLE THERMOLYSIN WITH BICYCLIC INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: THERMOLYSIN; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.24.27 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS THERMOPROTEOLYTICUS; SOURCE 3 ORGANISM_TAXID: 1427 KEYWDS HYDROLASE, METALLOPROTEASE EXPDTA X-RAY DIFFRACTION AUTHOR D.JUERS,N.YUSUFF,P.A.BARTLETT,B.W.MATTHEWS REVDAT 3 14-FEB-24 1PE7 1 REMARK LINK REVDAT 2 24-FEB-09 1PE7 1 VERSN REVDAT 1 08-JUN-04 1PE7 0 JRNL AUTH P.A.BARTLETT,N.YUSUFF,M.K.LINDVAL,D.HOLLAND,D.JUERS, JRNL AUTH 2 B.W.MATTHEWS JRNL TITL CONFORMATIONAL CONSTRAINT AND STRUCTURAL COMPLEMENTARITY IN JRNL TITL 2 THERMOLYSIN INHIBITORS: STRUCTURES OF ENZYME COMPLEXES AND JRNL TITL 3 CONCLUSIONS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH B.P.MORGAN,D.HOLLAND,B.W.MATTHEWS,P.A.BARTLETT REMARK 1 TITL STRUCTURE-BASED DESIGN OF AN INHIBITOR OF THE ZINC PEPTIDASE REMARK 1 TITL 2 THERMOLYSIN REMARK 1 REF J.AM.CHEM.SOC. V. 116 3251 1994 REMARK 1 REFN ISSN 0002-7863 REMARK 2 REMARK 2 RESOLUTION. 1.82 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.82 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 28433 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.139 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.1390 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 28433 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2432 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 193 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.017 ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : 2.700 ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : TNT REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 ACCORDING TO THE AUTHOR, SOME ATOMS WITH ALTERNATE CONFORMATIONS REMARK 3 WERE NOT RESTRAINED DURING REFINEMENT. THEREFORE THEIR OCCUPANCIES REMARK 3 MAY BE GREATER THAN 1.0. REMARK 3 ONLY ONE CONFORMATION IS GIVEN EACH FOR LEUCINE 202 AND THE REMARK 3 NEIGHBORING ISOBUTYL SIDE CHAIN OF THE INHIBITOR (RESIDUE LEN 324), REMARK 3 ALTHOUGH THE ELECTRON DENSITY SUGGESTS MULTIPLE CONFORMATIONS. REMARK 3 HOWEVER, REMARK 3 IN BOTH CASES THE CONFORMATION GIVEN APPEARS TO BE THE DOMINANT REMARK 3 ONE. REMARK 3 (WITH THE ISOBUTYL SIDE CHAIN, THE AMBIGUITY IS WITH REGARD TO REMARK 3 CHI2. REMARK 3 WITH LEU 202 THE AMBIGUITY IS ALSO WITH CHI2 AND TO A LESSER DEGREE REMARK 3 WITH CHI1.) REMARK 4 REMARK 4 1PE7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAY-03. REMARK 100 THE DEPOSITION ID IS D_1000019267. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SDMS REMARK 200 DATA SCALING SOFTWARE : SDMS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29471 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.820 REMARK 200 RESOLUTION RANGE LOW (A) : 38.170 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 59.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.15600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: TNT REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.80000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 87.60000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 65.70000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 109.50000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 21.90000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 43.80000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 87.60000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 109.50000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 65.70000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 21.90000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 619 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 690 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 160 CD GLU A 160 OE2 0.072 REMARK 500 GLU A 177 CD GLU A 177 OE2 0.079 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 16 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 16 CB - CG - OD2 ANGL. DEV. = -7.3 DEGREES REMARK 500 ASP A 32 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 43 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 43 CB - CG - OD2 ANGL. DEV. = -6.3 DEGREES REMARK 500 ARG A 47 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ASP A 59 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP A 72 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 TYR A 93 CB - CG - CD2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ASP A 94 CB - CG - OD1 ANGL. DEV. = 9.9 DEGREES REMARK 500 ASP A 94 CB - CG - OD2 ANGL. DEV. = -9.6 DEGREES REMARK 500 TYR A 110 CB - CG - CD2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ASP A 124 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP A 124 CB - CG - OD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ASP A 126 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP A 126 CB - CG - OD2 ANGL. DEV. = -6.5 DEGREES REMARK 500 ASP A 150 CB - CG - OD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ASP A 200 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ASP A 200 CB - CG - OD2 ANGL. DEV. = -9.4 DEGREES REMARK 500 ARG A 203 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ASP A 207 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP A 207 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP A 215 CB - CG - OD1 ANGL. DEV. = 7.2 DEGREES REMARK 500 ASP A 215 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG A 220 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ASP A 261 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG A 285 NE - CZ - NH1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG A 285 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 THR A 299 CA - CB - CG2 ANGL. DEV. = -8.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 25 82.49 -160.07 REMARK 500 THR A 26 -62.45 80.66 REMARK 500 SER A 92 -167.57 62.99 REMARK 500 SER A 107 -162.89 62.03 REMARK 500 ASN A 111 58.72 -98.45 REMARK 500 THR A 152 -97.62 -119.13 REMARK 500 ASN A 159 -145.32 54.06 REMARK 500 THR A 194 75.36 34.27 REMARK 500 ASP A 207 77.69 -151.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 320 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 57 OD1 REMARK 620 2 ASP A 57 OD2 52.6 REMARK 620 3 ASP A 59 OD1 118.6 66.3 REMARK 620 4 GLN A 61 O 95.7 90.2 89.3 REMARK 620 5 HOH A 419 O 81.8 133.6 159.5 85.9 REMARK 620 6 HOH A 482 O 156.4 148.4 82.6 94.8 78.0 REMARK 620 7 HOH A 503 O 82.7 85.6 88.0 175.7 97.8 88.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 318 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 138 OD2 REMARK 620 2 GLU A 177 OE1 78.2 REMARK 620 3 GLU A 177 OE2 126.5 48.7 REMARK 620 4 ASP A 185 OD1 158.5 122.8 74.9 REMARK 620 5 GLU A 187 O 84.8 147.5 143.0 74.6 REMARK 620 6 GLU A 190 OE1 83.1 128.8 122.5 85.8 75.3 REMARK 620 7 GLU A 190 OE2 100.2 82.9 71.3 88.0 127.7 54.2 REMARK 620 8 HOH A 346 O 99.1 79.7 79.5 82.0 75.9 150.8 150.7 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 317 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 142 NE2 REMARK 620 2 HIS A 146 NE2 103.4 REMARK 620 3 GLU A 166 OE2 130.0 91.7 REMARK 620 4 4BR A 322 OP1 113.8 124.5 94.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 319 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 177 OE2 REMARK 620 2 ASN A 183 O 88.7 REMARK 620 3 ASP A 185 OD2 86.6 94.8 REMARK 620 4 GLU A 190 OE2 88.4 174.8 80.7 REMARK 620 5 HOH A 353 O 88.9 90.7 172.8 93.6 REMARK 620 6 HOH A 475 O 172.9 92.5 100.3 90.9 84.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 321 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 193 O REMARK 620 2 THR A 194 O 79.5 REMARK 620 3 THR A 194 OG1 78.1 66.5 REMARK 620 4 ILE A 197 O 157.0 79.2 101.3 REMARK 620 5 ASP A 200 OD1 124.5 130.7 76.9 76.8 REMARK 620 6 HOH A 354 O 81.8 153.0 128.0 114.5 76.2 REMARK 620 7 HOH A 480 O 87.5 85.9 150.6 82.3 131.7 73.8 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 317 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 318 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 319 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 320 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 321 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 4BR A 322 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LEU A 323 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LEN A 324 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 325 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1PE5 RELATED DB: PDB REMARK 900 RELATED ID: 1PE8 RELATED DB: PDB DBREF 1PE7 A 1 316 UNP P00800 THER_BACTH 1 316 SEQRES 1 A 316 ILE THR GLY THR SER THR VAL GLY VAL GLY ARG GLY VAL SEQRES 2 A 316 LEU GLY ASP GLN LYS ASN ILE ASN THR THR TYR SER THR SEQRES 3 A 316 TYR TYR TYR LEU GLN ASP ASN THR ARG GLY ASP GLY ILE SEQRES 4 A 316 PHE THR TYR ASP ALA LYS TYR ARG THR THR LEU PRO GLY SEQRES 5 A 316 SER LEU TRP ALA ASP ALA ASP ASN GLN PHE PHE ALA SER SEQRES 6 A 316 TYR ASP ALA PRO ALA VAL ASP ALA HIS TYR TYR ALA GLY SEQRES 7 A 316 VAL THR TYR ASP TYR TYR LYS ASN VAL HIS ASN ARG LEU SEQRES 8 A 316 SER TYR ASP GLY ASN ASN ALA ALA ILE ARG SER SER VAL SEQRES 9 A 316 HIS TYR SER GLN GLY TYR ASN ASN ALA PHE TRP ASN GLY SEQRES 10 A 316 SER GLU MET VAL TYR GLY ASP GLY ASP GLY GLN THR PHE SEQRES 11 A 316 ILE PRO LEU SER GLY GLY ILE ASP VAL VAL ALA HIS GLU SEQRES 12 A 316 LEU THR HIS ALA VAL THR ASP TYR THR ALA GLY LEU ILE SEQRES 13 A 316 TYR GLN ASN GLU SER GLY ALA ILE ASN GLU ALA ILE SER SEQRES 14 A 316 ASP ILE PHE GLY THR LEU VAL GLU PHE TYR ALA ASN LYS SEQRES 15 A 316 ASN PRO ASP TRP GLU ILE GLY GLU ASP VAL TYR THR PRO SEQRES 16 A 316 GLY ILE SER GLY ASP SER LEU ARG SER MET SER ASP PRO SEQRES 17 A 316 ALA LYS TYR GLY ASP PRO ASP HIS TYR SER LYS ARG TYR SEQRES 18 A 316 THR GLY THR GLN ASP ASN GLY GLY VAL HIS ILE ASN SER SEQRES 19 A 316 GLY ILE ILE ASN LYS ALA ALA TYR LEU ILE SER GLN GLY SEQRES 20 A 316 GLY THR HIS TYR GLY VAL SER VAL VAL GLY ILE GLY ARG SEQRES 21 A 316 ASP LYS LEU GLY LYS ILE PHE TYR ARG ALA LEU THR GLN SEQRES 22 A 316 TYR LEU THR PRO THR SER ASN PHE SER GLN LEU ARG ALA SEQRES 23 A 316 ALA ALA VAL GLN SER ALA THR ASP LEU TYR GLY SER THR SEQRES 24 A 316 SER GLN GLU VAL ALA SER VAL LYS GLN ALA PHE ASP ALA SEQRES 25 A 316 VAL GLY VAL LYS HET ZN A 317 1 HET CA A 318 1 HET CA A 319 1 HET CA A 320 1 HET CA A 321 1 HET 4BR A 322 13 HET LEU A 323 8 HET LEN A 324 6 HET DMS A 325 4 HETNAM ZN ZINC ION HETNAM CA CALCIUM ION HETNAM 4BR 2-(4-METHYLPHENOXY)ETHYLPHOSPHINATE HETNAM LEU LEUCINE HETNAM LEN 3-METHYLBUTAN-1-AMINE HETNAM DMS DIMETHYL SULFOXIDE FORMUL 2 ZN ZN 2+ FORMUL 3 CA 4(CA 2+) FORMUL 7 4BR C9 H12 O3 P 1- FORMUL 8 LEU C6 H13 N O2 FORMUL 9 LEN C5 H13 N FORMUL 10 DMS C2 H6 O S FORMUL 11 HOH *193(H2 O) HELIX 1 1 ALA A 64 TYR A 66 5 3 HELIX 2 2 ASP A 67 ASN A 89 1 23 HELIX 3 3 PRO A 132 GLY A 135 5 4 HELIX 4 4 GLY A 136 THR A 152 1 17 HELIX 5 5 GLN A 158 ALA A 180 1 23 HELIX 6 6 ASP A 207 GLY A 212 5 6 HELIX 7 7 HIS A 216 ARG A 220 5 5 HELIX 8 8 THR A 224 VAL A 230 1 7 HELIX 9 9 ASN A 233 GLY A 247 1 15 HELIX 10 10 GLY A 259 TYR A 274 1 16 HELIX 11 11 ASN A 280 GLY A 297 1 18 HELIX 12 12 SER A 300 VAL A 313 1 14 SHEET 1 A 5 ALA A 56 ASP A 57 0 SHEET 2 A 5 TYR A 28 TYR A 29 -1 N TYR A 28 O ASP A 57 SHEET 3 A 5 GLN A 17 TYR A 24 -1 N THR A 23 O TYR A 29 SHEET 4 A 5 THR A 4 ARG A 11 -1 N THR A 4 O TYR A 24 SHEET 5 A 5 GLN A 61 PHE A 62 1 O PHE A 62 N VAL A 9 SHEET 1 B 3 GLN A 31 ASP A 32 0 SHEET 2 B 3 ILE A 39 ASP A 43 -1 O ILE A 39 N ASP A 32 SHEET 3 B 3 SER A 53 LEU A 54 -1 O SER A 53 N ASP A 43 SHEET 1 C 5 GLN A 31 ASP A 32 0 SHEET 2 C 5 ILE A 39 ASP A 43 -1 O ILE A 39 N ASP A 32 SHEET 3 C 5 ILE A 100 VAL A 104 1 O ILE A 100 N PHE A 40 SHEET 4 C 5 MET A 120 TYR A 122 1 O MET A 120 N SER A 103 SHEET 5 C 5 ALA A 113 TRP A 115 -1 N PHE A 114 O VAL A 121 SHEET 1 D 2 GLU A 187 ILE A 188 0 SHEET 2 D 2 ARG A 203 SER A 204 -1 O ARG A 203 N ILE A 188 SHEET 1 E 2 GLY A 248 HIS A 250 0 SHEET 2 E 2 VAL A 253 VAL A 255 -1 O VAL A 255 N GLY A 248 LINK P 4BR A 322 N LEU A 323 1555 1555 1.73 LINK CA1 4BR A 322 CA LEN A 324 1555 1555 1.59 LINK C LEU A 323 N LEN A 324 1555 1555 1.33 LINK OD1 ASP A 57 CA CA A 320 1555 1555 2.45 LINK OD2 ASP A 57 CA CA A 320 1555 1555 2.54 LINK OD1 ASP A 59 CA CA A 320 1555 1555 2.38 LINK O GLN A 61 CA CA A 320 1555 1555 2.23 LINK OD2 ASP A 138 CA CA A 318 1555 1555 2.33 LINK NE2 HIS A 142 ZN ZN A 317 1555 1555 2.02 LINK NE2 HIS A 146 ZN ZN A 317 1555 1555 2.04 LINK OE2 GLU A 166 ZN ZN A 317 1555 1555 2.15 LINK OE1 GLU A 177 CA CA A 318 1555 1555 2.48 LINK OE2 GLU A 177 CA CA A 318 1555 1555 2.87 LINK OE2 GLU A 177 CA CA A 319 1555 1555 2.30 LINK O ASN A 183 CA CA A 319 1555 1555 2.40 LINK OD1 ASP A 185 CA CA A 318 1555 1555 2.40 LINK OD2 ASP A 185 CA CA A 319 1555 1555 2.35 LINK O GLU A 187 CA CA A 318 1555 1555 2.26 LINK OE1 GLU A 190 CA CA A 318 1555 1555 2.38 LINK OE2 GLU A 190 CA CA A 318 1555 1555 2.57 LINK OE2 GLU A 190 CA CA A 319 1555 1555 2.26 LINK O TYR A 193 CA CA A 321 1555 1555 2.38 LINK O THR A 194 CA CA A 321 1555 1555 2.28 LINK OG1 THR A 194 CA CA A 321 1555 1555 2.24 LINK O ILE A 197 CA CA A 321 1555 1555 2.22 LINK OD1 ASP A 200 CA CA A 321 1555 1555 2.27 LINK ZN ZN A 317 OP1 4BR A 322 1555 1555 1.99 LINK CA CA A 318 O HOH A 346 1555 1555 2.61 LINK CA CA A 319 O HOH A 353 1555 1555 2.34 LINK CA CA A 319 O HOH A 475 1555 1555 2.41 LINK CA CA A 320 O HOH A 419 1555 1555 2.40 LINK CA CA A 320 O HOH A 482 1555 1555 2.33 LINK CA CA A 320 O HOH A 503 1555 1555 2.27 LINK CA CA A 321 O HOH A 354 1555 1555 2.44 LINK CA CA A 321 O HOH A 480 1555 1555 2.30 CISPEP 1 LEU A 50 PRO A 51 0 4.55 SITE 1 AC1 5 HIS A 142 HIS A 146 TYR A 157 GLU A 166 SITE 2 AC1 5 4BR A 322 SITE 1 AC2 6 ASP A 138 GLU A 177 ASP A 185 GLU A 187 SITE 2 AC2 6 GLU A 190 HOH A 346 SITE 1 AC3 6 GLU A 177 ASN A 183 ASP A 185 GLU A 190 SITE 2 AC3 6 HOH A 353 HOH A 475 SITE 1 AC4 6 ASP A 57 ASP A 59 GLN A 61 HOH A 419 SITE 2 AC4 6 HOH A 482 HOH A 503 SITE 1 AC5 6 TYR A 193 THR A 194 ILE A 197 ASP A 200 SITE 2 AC5 6 HOH A 354 HOH A 480 SITE 1 AC6 13 ASN A 112 ALA A 113 HIS A 142 GLU A 143 SITE 2 AC6 13 HIS A 146 TYR A 157 GLU A 166 ASP A 226 SITE 3 AC6 13 HIS A 231 ZN A 317 LEU A 323 LEN A 324 SITE 4 AC6 13 HOH A 362 SITE 1 AC7 8 ASN A 112 ALA A 113 GLU A 143 LEU A 202 SITE 2 AC7 8 ARG A 203 HIS A 231 4BR A 322 LEN A 324 SITE 1 AC8 6 ASN A 111 ASN A 112 LEU A 202 HIS A 231 SITE 2 AC8 6 4BR A 322 LEU A 323 SITE 1 AC9 4 HIS A 216 SER A 218 TYR A 251 HOH A 506 CRYST1 93.800 93.800 131.400 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010661 0.006155 0.000000 0.00000 SCALE2 0.000000 0.012310 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007610 0.00000