PDB Short entry for 1Q6I HEADER ISOMERASE 13-AUG-03 1Q6I TITLE CRYSTAL STRUCTURE OF A TRUNCATED FORM OF FKPA FROM ESCHERICHIA COLI, TITLE 2 IN COMPLEX WITH IMMUNOSUPPRESSANT FK506 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PPIASE, ROTAMASE; COMPND 5 EC: 5.2.1.8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: FKPA OR B3347; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: MC4100 DERIVATIVE; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PTFKPDCT KEYWDS CHAPERONE, PEPTIDYL-PROLYL ISOMERASE, HEAT SHOCK PROTEIN, FKBP KEYWDS 2 FAMILY, IMMUNOSUPPRESSANT FK506, ASCOMYCIN, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR F.A.SAUL,J.-P.ARIE,B.VULLIEZ-LE NORMAND,R.KAHN,J.-M.BETTON, AUTHOR 2 G.A.BENTLEY REVDAT 4 03-APR-24 1Q6I 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 1Q6I 1 VERSN REVDAT 2 24-FEB-09 1Q6I 1 VERSN REVDAT 1 13-JAN-04 1Q6I 0 JRNL AUTH F.A.SAUL,J.P.ARIE,B.VULLIEZ-LE NORMAND,R.KAHN,J.M.BETTON, JRNL AUTH 2 G.A.BENTLEY JRNL TITL STRUCTURAL AND FUNCTIONAL STUDIES OF FKPA FROM ESCHERICHIA JRNL TITL 2 COLI, A CIS/TRANS PEPTIDYL-PROLYL ISOMERASE WITH CHAPERONE JRNL TITL 3 ACTIVITY. JRNL REF J.MOL.BIOL. V. 335 595 2004 JRNL REFN ISSN 0022-2836 JRNL PMID 14672666 JRNL DOI 10.1016/J.JMB.2003.10.056 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.6 REMARK 3 NUMBER OF REFLECTIONS : 21956 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 700 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 40 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.28 REMARK 3 REFLECTION IN BIN (WORKING SET) : 651 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2680 REMARK 3 BIN FREE R VALUE SET COUNT : 17 REMARK 3 BIN FREE R VALUE : 0.4510 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3224 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 114 REMARK 3 SOLVENT ATOMS : 230 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 39.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.08000 REMARK 3 B22 (A**2) : 3.30000 REMARK 3 B33 (A**2) : -2.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.332 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.241 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.266 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.443 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3406 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3129 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4581 ; 1.758 ; 2.026 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7388 ; 1.130 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 418 ; 4.043 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 674 ;17.025 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 509 ; 0.109 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3693 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 583 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 816 ; 0.237 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2966 ; 0.216 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 4 ; 0.333 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 283 ; 0.184 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): 4 ; 0.234 ; 0.500 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.191 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 29 ; 0.222 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 23 ; 0.196 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2079 ; 1.111 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3319 ; 1.838 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1327 ; 1.939 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1262 ; 3.075 ; 4.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 15 A 69 REMARK 3 ORIGIN FOR THE GROUP (A): -6.6383 56.3976 38.5617 REMARK 3 T TENSOR REMARK 3 T11: 0.1578 T22: 0.1368 REMARK 3 T33: 0.2074 T12: -0.0330 REMARK 3 T13: 0.0654 T23: 0.0277 REMARK 3 L TENSOR REMARK 3 L11: 4.4019 L22: 0.3277 REMARK 3 L33: 4.3795 L12: 0.7413 REMARK 3 L13: 3.7870 L23: 1.0069 REMARK 3 S TENSOR REMARK 3 S11: -0.0424 S12: 0.3735 S13: -0.0134 REMARK 3 S21: -0.0450 S22: 0.0320 S23: -0.1650 REMARK 3 S31: -0.1662 S32: 0.2967 S33: 0.0105 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 70 A 112 REMARK 3 ORIGIN FOR THE GROUP (A): -5.3102 40.0949 17.7930 REMARK 3 T TENSOR REMARK 3 T11: 0.1596 T22: 0.1709 REMARK 3 T33: 0.1828 T12: -0.0186 REMARK 3 T13: 0.0055 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 18.8629 L22: 3.5503 REMARK 3 L33: 20.7283 L12: -7.8334 REMARK 3 L13: -19.8787 L23: 8.4525 REMARK 3 S TENSOR REMARK 3 S11: 0.2133 S12: 0.0470 S13: -0.1704 REMARK 3 S21: -0.0575 S22: -0.3453 S23: 0.1845 REMARK 3 S31: -0.2019 S32: -0.2333 S33: 0.1319 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 113 A 224 REMARK 3 RESIDUE RANGE : A 301 A 301 REMARK 3 ORIGIN FOR THE GROUP (A): 17.5092 24.8399 13.6266 REMARK 3 T TENSOR REMARK 3 T11: 0.0432 T22: 0.0163 REMARK 3 T33: 0.0763 T12: -0.0265 REMARK 3 T13: -0.0131 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 2.9328 L22: 1.7065 REMARK 3 L33: 3.0790 L12: -0.4563 REMARK 3 L13: -0.0697 L23: -0.3225 REMARK 3 S TENSOR REMARK 3 S11: 0.0049 S12: -0.2414 S13: 0.0733 REMARK 3 S21: 0.2448 S22: -0.0617 S23: -0.0729 REMARK 3 S31: -0.1236 S32: 0.0760 S33: 0.0568 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 15 B 69 REMARK 3 ORIGIN FOR THE GROUP (A): -9.1064 56.5146 43.7269 REMARK 3 T TENSOR REMARK 3 T11: 0.1245 T22: 0.0828 REMARK 3 T33: 0.1611 T12: 0.0277 REMARK 3 T13: 0.0611 T23: 0.0208 REMARK 3 L TENSOR REMARK 3 L11: 3.5091 L22: 0.7125 REMARK 3 L33: 6.5769 L12: 0.3491 REMARK 3 L13: 1.9034 L23: 0.5053 REMARK 3 S TENSOR REMARK 3 S11: -0.1212 S12: 0.1473 S13: 0.2028 REMARK 3 S21: -0.1257 S22: -0.1165 S23: -0.0408 REMARK 3 S31: -0.1139 S32: -0.2874 S33: 0.2377 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 70 B 112 REMARK 3 ORIGIN FOR THE GROUP (A): -4.9072 43.9711 66.2018 REMARK 3 T TENSOR REMARK 3 T11: 0.1624 T22: 0.1064 REMARK 3 T33: 0.1653 T12: -0.0184 REMARK 3 T13: 0.0470 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 12.6925 L22: 8.1548 REMARK 3 L33: 16.4538 L12: 10.4254 REMARK 3 L13: -14.8265 L23: -11.8189 REMARK 3 S TENSOR REMARK 3 S11: -0.0341 S12: -0.0147 S13: -0.3890 REMARK 3 S21: 0.0554 S22: -0.2493 S23: -0.2980 REMARK 3 S31: -0.0124 S32: 0.1771 S33: 0.2834 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 113 B 224 REMARK 3 RESIDUE RANGE : A 401 A 401 REMARK 3 ORIGIN FOR THE GROUP (A): -26.4234 28.3598 67.4910 REMARK 3 T TENSOR REMARK 3 T11: 0.1440 T22: 0.0188 REMARK 3 T33: 0.1015 T12: 0.0225 REMARK 3 T13: 0.0152 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 3.6920 L22: 1.4635 REMARK 3 L33: 2.3480 L12: 1.4652 REMARK 3 L13: 0.7458 L23: 0.1273 REMARK 3 S TENSOR REMARK 3 S11: -0.0613 S12: 0.3287 S13: 0.1765 REMARK 3 S21: -0.3498 S22: 0.0287 S23: 0.0500 REMARK 3 S31: -0.2740 S32: -0.0181 S33: 0.0325 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1Q6I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-AUG-03. REMARK 100 THE DEPOSITION ID IS D_1000019977. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-03 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22702 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.4 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : 0.06800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.25900 REMARK 200 R SYM FOR SHELL (I) : 0.22000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: RIGID-BODY REFINEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: FKPA (INDIVIDUAL N- AND C-DOMAINS) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 2000, SODIUM ACETATE, PH 4.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.57000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.78500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.72000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 79.78500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.57000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.72000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER (CHAINS A, B) REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 GLU A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 LYS A 5 REMARK 465 PRO A 6 REMARK 465 ALA A 7 REMARK 465 THR A 8 REMARK 465 ALA A 9 REMARK 465 ALA A 10 REMARK 465 ASP A 11 REMARK 465 SER A 12 REMARK 465 LYS A 13 REMARK 465 ALA A 14 REMARK 465 ALA B 1 REMARK 465 GLU B 2 REMARK 465 ALA B 3 REMARK 465 ALA B 4 REMARK 465 LYS B 5 REMARK 465 PRO B 6 REMARK 465 ALA B 7 REMARK 465 THR B 8 REMARK 465 ALA B 9 REMARK 465 ALA B 10 REMARK 465 ASP B 11 REMARK 465 SER B 12 REMARK 465 LYS B 13 REMARK 465 ALA B 14 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 70 NH2 ARG B 33 2.10 REMARK 500 OH TYR B 160 O HOH B 500 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 19 CB - CG - OD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 ASP A 20 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 64 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP A 171 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP B 52 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP B 60 CB - CG - OD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP B 64 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP B 70 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP B 95 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP B 217 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 199 -117.90 -126.32 REMARK 500 ASN B 18 -153.83 -176.23 REMARK 500 ASN B 158 101.20 -167.05 REMARK 500 ALA B 199 -116.92 -134.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 FK5 301 IS ASSOCIATED WITH MOLECULE A. REMARK 600 FK5 401 IS ASSOCIATED WITH MOLECULE B. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FK5 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FK5 B 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Q6H RELATED DB: PDB REMARK 900 FKPA FROM E. COLI REMARK 900 RELATED ID: 1Q6U RELATED DB: PDB REMARK 900 FKPA FROM E. COLI DBREF 1Q6I A 1 224 UNP P45523 FKBA_ECOLI 26 249 DBREF 1Q6I B 1 224 UNP P45523 FKBA_ECOLI 26 249 SEQADV 1Q6I MSE A 35 UNP P45523 MET 60 MODIFIED RESIDUE SEQADV 1Q6I MSE A 92 UNP P45523 MET 117 MODIFIED RESIDUE SEQADV 1Q6I MSE B 35 UNP P45523 MET 60 MODIFIED RESIDUE SEQADV 1Q6I MSE B 92 UNP P45523 MET 117 MODIFIED RESIDUE SEQRES 1 A 224 ALA GLU ALA ALA LYS PRO ALA THR ALA ALA ASP SER LYS SEQRES 2 A 224 ALA ALA PHE LYS ASN ASP ASP GLN LYS SER ALA TYR ALA SEQRES 3 A 224 LEU GLY ALA SER LEU GLY ARG TYR MSE GLU ASN SER LEU SEQRES 4 A 224 LYS GLU GLN GLU LYS LEU GLY ILE LYS LEU ASP LYS ASP SEQRES 5 A 224 GLN LEU ILE ALA GLY VAL GLN ASP ALA PHE ALA ASP LYS SEQRES 6 A 224 SER LYS LEU SER ASP GLN GLU ILE GLU GLN THR LEU GLN SEQRES 7 A 224 ALA PHE GLU ALA ARG VAL LYS SER SER ALA GLN ALA LYS SEQRES 8 A 224 MSE GLU LYS ASP ALA ALA ASP ASN GLU ALA LYS GLY LYS SEQRES 9 A 224 GLU TYR ARG GLU LYS PHE ALA LYS GLU LYS GLY VAL LYS SEQRES 10 A 224 THR SER SER THR GLY LEU VAL TYR GLN VAL VAL GLU ALA SEQRES 11 A 224 GLY LYS GLY GLU ALA PRO LYS ASP SER ASP THR VAL VAL SEQRES 12 A 224 VAL ASN TYR LYS GLY THR LEU ILE ASP GLY LYS GLU PHE SEQRES 13 A 224 ASP ASN SER TYR THR ARG GLY GLU PRO LEU SER PHE ARG SEQRES 14 A 224 LEU ASP GLY VAL ILE PRO GLY TRP THR GLU GLY LEU LYS SEQRES 15 A 224 ASN ILE LYS LYS GLY GLY LYS ILE LYS LEU VAL ILE PRO SEQRES 16 A 224 PRO GLU LEU ALA TYR GLY LYS ALA GLY VAL PRO GLY ILE SEQRES 17 A 224 PRO PRO ASN SER THR LEU VAL PHE ASP VAL GLU LEU LEU SEQRES 18 A 224 ASP VAL LYS SEQRES 1 B 224 ALA GLU ALA ALA LYS PRO ALA THR ALA ALA ASP SER LYS SEQRES 2 B 224 ALA ALA PHE LYS ASN ASP ASP GLN LYS SER ALA TYR ALA SEQRES 3 B 224 LEU GLY ALA SER LEU GLY ARG TYR MSE GLU ASN SER LEU SEQRES 4 B 224 LYS GLU GLN GLU LYS LEU GLY ILE LYS LEU ASP LYS ASP SEQRES 5 B 224 GLN LEU ILE ALA GLY VAL GLN ASP ALA PHE ALA ASP LYS SEQRES 6 B 224 SER LYS LEU SER ASP GLN GLU ILE GLU GLN THR LEU GLN SEQRES 7 B 224 ALA PHE GLU ALA ARG VAL LYS SER SER ALA GLN ALA LYS SEQRES 8 B 224 MSE GLU LYS ASP ALA ALA ASP ASN GLU ALA LYS GLY LYS SEQRES 9 B 224 GLU TYR ARG GLU LYS PHE ALA LYS GLU LYS GLY VAL LYS SEQRES 10 B 224 THR SER SER THR GLY LEU VAL TYR GLN VAL VAL GLU ALA SEQRES 11 B 224 GLY LYS GLY GLU ALA PRO LYS ASP SER ASP THR VAL VAL SEQRES 12 B 224 VAL ASN TYR LYS GLY THR LEU ILE ASP GLY LYS GLU PHE SEQRES 13 B 224 ASP ASN SER TYR THR ARG GLY GLU PRO LEU SER PHE ARG SEQRES 14 B 224 LEU ASP GLY VAL ILE PRO GLY TRP THR GLU GLY LEU LYS SEQRES 15 B 224 ASN ILE LYS LYS GLY GLY LYS ILE LYS LEU VAL ILE PRO SEQRES 16 B 224 PRO GLU LEU ALA TYR GLY LYS ALA GLY VAL PRO GLY ILE SEQRES 17 B 224 PRO PRO ASN SER THR LEU VAL PHE ASP VAL GLU LEU LEU SEQRES 18 B 224 ASP VAL LYS MODRES 1Q6I MSE A 35 MET SELENOMETHIONINE MODRES 1Q6I MSE A 92 MET SELENOMETHIONINE MODRES 1Q6I MSE B 35 MET SELENOMETHIONINE MODRES 1Q6I MSE B 92 MET SELENOMETHIONINE HET MSE A 35 12 HET MSE A 92 8 HET MSE B 35 12 HET MSE B 92 8 HET FK5 A 301 57 HET FK5 B 401 57 HETNAM MSE SELENOMETHIONINE HETNAM FK5 8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN HETSYN FK5 K506 FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 FK5 2(C44 H69 N O12) FORMUL 5 HOH *230(H2 O) HELIX 1 1 ASN A 18 LEU A 45 1 28 HELIX 2 2 ASP A 50 ALA A 63 1 14 HELIX 3 3 SER A 69 LYS A 112 1 44 HELIX 4 4 TYR A 160 GLY A 163 5 4 HELIX 5 5 ASP A 171 VAL A 173 5 3 HELIX 6 6 ILE A 174 LEU A 181 1 8 HELIX 7 7 LYS A 182 ILE A 184 5 3 HELIX 8 8 PRO A 195 ALA A 199 5 5 HELIX 9 9 ASN B 18 LYS B 44 1 27 HELIX 10 10 ASP B 50 ALA B 63 1 14 HELIX 11 11 SER B 69 LYS B 112 1 44 HELIX 12 12 SER B 159 GLY B 163 1 5 HELIX 13 13 ASP B 171 VAL B 173 5 3 HELIX 14 14 ILE B 174 LEU B 181 1 8 HELIX 15 15 LYS B 182 ILE B 184 5 3 HELIX 16 16 PRO B 195 ALA B 199 5 5 SHEET 1 A 6 VAL A 116 THR A 118 0 SHEET 2 A 6 VAL A 124 GLU A 129 -1 O TYR A 125 N LYS A 117 SHEET 3 A 6 LYS A 189 ILE A 194 -1 O VAL A 193 N VAL A 124 SHEET 4 A 6 LEU A 214 LYS A 224 -1 O PHE A 216 N LEU A 192 SHEET 5 A 6 THR A 141 LEU A 150 -1 N THR A 141 O LYS A 224 SHEET 6 A 6 GLU A 155 ASN A 158 -1 O ASP A 157 N GLY A 148 SHEET 1 B 6 VAL A 116 THR A 118 0 SHEET 2 B 6 VAL A 124 GLU A 129 -1 O TYR A 125 N LYS A 117 SHEET 3 B 6 LYS A 189 ILE A 194 -1 O VAL A 193 N VAL A 124 SHEET 4 B 6 LEU A 214 LYS A 224 -1 O PHE A 216 N LEU A 192 SHEET 5 B 6 THR A 141 LEU A 150 -1 N THR A 141 O LYS A 224 SHEET 6 B 6 LEU A 166 ARG A 169 -1 O LEU A 166 N VAL A 144 SHEET 1 C 6 LYS B 117 THR B 118 0 SHEET 2 C 6 VAL B 124 GLU B 129 -1 O TYR B 125 N LYS B 117 SHEET 3 C 6 LYS B 189 ILE B 194 -1 O VAL B 193 N VAL B 124 SHEET 4 C 6 LEU B 214 LYS B 224 -1 O LEU B 214 N ILE B 194 SHEET 5 C 6 THR B 141 LEU B 150 -1 N THR B 141 O LYS B 224 SHEET 6 C 6 GLU B 155 ASN B 158 -1 O ASP B 157 N GLY B 148 SHEET 1 D 6 LYS B 117 THR B 118 0 SHEET 2 D 6 VAL B 124 GLU B 129 -1 O TYR B 125 N LYS B 117 SHEET 3 D 6 LYS B 189 ILE B 194 -1 O VAL B 193 N VAL B 124 SHEET 4 D 6 LEU B 214 LYS B 224 -1 O LEU B 214 N ILE B 194 SHEET 5 D 6 THR B 141 LEU B 150 -1 N THR B 141 O LYS B 224 SHEET 6 D 6 LEU B 166 ARG B 169 -1 O PHE B 168 N VAL B 142 LINK C TYR A 34 N MSE A 35 1555 1555 1.33 LINK C MSE A 35 N GLU A 36 1555 1555 1.32 LINK C LYS A 91 N MSE A 92 1555 1555 1.33 LINK C MSE A 92 N GLU A 93 1555 1555 1.32 LINK C TYR B 34 N MSE B 35 1555 1555 1.32 LINK C MSE B 35 N GLU B 36 1555 1555 1.33 LINK C LYS B 91 N MSE B 92 1555 1555 1.33 LINK C MSE B 92 N GLU B 93 1555 1555 1.33 SITE 1 AC1 18 TYR A 146 PHE A 156 ASP A 157 VAL A 173 SITE 2 AC1 18 ILE A 174 TRP A 177 TYR A 200 ILE A 208 SITE 3 AC1 18 PHE A 216 HOH A 329 HOH A 365 HOH A 389 SITE 4 AC1 18 HOH A 416 HOH A 418 HOH A 420 LYS B 48 SITE 5 AC1 18 LYS B 51 HOH B 429 SITE 1 AC2 13 TYR B 146 PHE B 156 ASP B 157 ARG B 162 SITE 2 AC2 13 LEU B 166 GLY B 172 VAL B 173 ILE B 174 SITE 3 AC2 13 TRP B 177 ALA B 199 TYR B 200 ILE B 208 SITE 4 AC2 13 HOH B 491 CRYST1 37.140 85.440 159.570 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026925 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011704 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006267 0.00000