PDB Short entry for 1QLE HEADER OXIDOREDUCTASE/IMMUNE SYSTEM 30-AUG-99 1QLE TITLE CRYO-STRUCTURE OF THE PARACOCCUS DENITRIFICANS FOUR-SUBUNIT CYTOCHROME TITLE 2 C OXIDASE IN THE COMPLETELY OXIDIZED STATE COMPLEXED WITH AN ANTIBODY TITLE 3 FV FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C OXIDASE POLYPEPTIDE I-BETA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CYTOCHROME AA3 SUBUNIT 1-BETA; COMPND 5 EC: 1.9.3.1; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CYTOCHROME C OXIDASE POLYPEPTIDE II; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: CYTOCHROME AA3 SUBUNIT 2, OXIDASE AA(3) SUBUNIT 2; COMPND 10 EC: 1.9.3.1; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: CYTOCHROME C OXIDASE POLYPEPTIDE III; COMPND 13 CHAIN: C; COMPND 14 SYNONYM: CYTOCHROME AA3SUBUNIT 3, OXIDASE AA(3) SUBUNIT 3; COMPND 15 EC: 1.9.3.1; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: CCYTOCHROME C OXIDASE; COMPND 18 CHAIN: D; COMPND 19 SYNONYM: CYTOCHROME AA3; COMPND 20 EC: 1.9.3.1; COMPND 21 MOL_ID: 5; COMPND 22 MOLECULE: HEAVY CHAIN ANTIBODY FV FRAGMENT; COMPND 23 CHAIN: H; COMPND 24 ENGINEERED: YES; COMPND 25 MOL_ID: 6; COMPND 26 MOLECULE: LIGHT CHAIN ANTIBODY FV FRAGMENT; COMPND 27 CHAIN: L; COMPND 28 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PARACOCCUS DENITRIFICANS; SOURCE 3 ORGANISM_TAXID: 266; SOURCE 4 ATCC: 13543; SOURCE 5 CELLULAR_LOCATION: CYTOPLASMIC MEMBRANE; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: PARACOCCUS DENITRIFICANS; SOURCE 8 ORGANISM_TAXID: 266; SOURCE 9 ATCC: 13543; SOURCE 10 CELLULAR_LOCATION: CYTOPLASMIC MEMBRANE; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: PARACOCCUS DENITRIFICANS; SOURCE 13 ORGANISM_TAXID: 266; SOURCE 14 ATCC: 13543; SOURCE 15 CELLULAR_LOCATION: CYTOPLASMIC MEMBRANE; SOURCE 16 MOL_ID: 4; SOURCE 17 ORGANISM_SCIENTIFIC: PARACOCCUS DENITRIFICANS; SOURCE 18 ORGANISM_TAXID: 266; SOURCE 19 ATCC: 13543; SOURCE 20 CELLULAR_LOCATION: CYTOPLASMIC MEMBRANE; SOURCE 21 MOL_ID: 5; SOURCE 22 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 23 ORGANISM_COMMON: MOUSE; SOURCE 24 ORGANISM_TAXID: 10090; SOURCE 25 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 26 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 27 MOL_ID: 6; SOURCE 28 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 29 ORGANISM_COMMON: MOUSE; SOURCE 30 ORGANISM_TAXID: 10090; SOURCE 31 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 32 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OXIDOREDUCTASE/IMMUNE SYSTEM, COMPLEX (OXIDOREDUCTASE-ANTIBODY), KEYWDS 2 ELECTRON TRANSPORT, TRANSMEMBRANE, CYTOCHROME OXIDASE, ANTIBODY KEYWDS 3 COMPLEX, OXIDOREDUCTASE-IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.HARRENGA,H.MICHEL REVDAT 5 04-MAY-22 1QLE 1 COMPND HELIX SHEET LINK REVDAT 5 2 1 ATOM REVDAT 4 12-JUL-17 1QLE 1 REVDAT 3 24-FEB-09 1QLE 1 VERSN REVDAT 2 01-AUG-03 1QLE 1 DBREF LINK REVDAT 1 02-DEC-99 1QLE 0 JRNL AUTH A.HARRENGA,H.MICHEL JRNL TITL THE CYTOCHROME C OXIDASE FROM PARACOCCUS DENITRIFICANS DOES JRNL TITL 2 NOT CHANGE THE METAL CENTER LIGATION UPON REDUCTION JRNL REF J.BIOL.CHEM. V. 274 33296 1999 JRNL REFN ISSN 0021-9258 JRNL PMID 10559205 JRNL DOI 10.1074/JBC.274.47.33296 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 0.3 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 5840810.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 66.2 REMARK 3 NUMBER OF REFLECTIONS : 39276 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.309 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1975 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.16 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 38.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3561 REMARK 3 BIN R VALUE (WORKING SET) : 0.2820 REMARK 3 BIN FREE R VALUE : 0.3660 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 203 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.026 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10529 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 233 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.39000 REMARK 3 B22 (A**2) : -0.39000 REMARK 3 B33 (A**2) : 0.78000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.40 REMARK 3 ESD FROM SIGMAA (A) : 0.44 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.55 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.80 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.500 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1QLE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-AUG-99. REMARK 100 THE DEPOSITION ID IS D_1290004025. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.00 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9875 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64653 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.11500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: CNS 0.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 8.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE CRYSTAL STRUCTURE SHOWS A CRYSTAL REMARK 300 PACKING ARRANGEMENT WHERETHERE IS CONTACT BETWEEN REMARK 300 CHAINS C AND H GIVING A CYCLICPACKING WITHCHAIN- REMARK 300 H ... (CHAIN-C...CHAIN-H) ... CHAIN-C(Y,-X,Z REMARK 300 ) ASU: X,Y,Z (-Y,X,Z) REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 24580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 61150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -229.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU H 6 N CYS H 96 1.66 REMARK 500 NZ LYS C 4 OG1 THR D 7 2.03 REMARK 500 OE1 GLU H 6 SG CYS H 96 2.08 REMARK 500 CE1 HIS C 6 O TYR C 8 2.10 REMARK 500 CD1 LEU B 4 CD1 TRP B 242 2.15 REMARK 500 O ASP B 159 CD PRO B 161 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP C 252 CB TRP C 252 CG 0.115 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 516 NE - CZ - NH2 ANGL. DEV. = 3.6 DEGREES REMARK 500 MET C 35 CG - SD - CE ANGL. DEV. = 9.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 18 91.60 -47.48 REMARK 500 PHE A 19 29.50 -59.59 REMARK 500 THR A 20 -35.34 -138.42 REMARK 500 THR A 26 2.22 -162.90 REMARK 500 VAL A 47 3.33 -64.17 REMARK 500 GLN A 63 -64.66 -96.49 REMARK 500 TYR A 64 -76.67 -69.24 REMARK 500 MET A 65 102.21 -57.59 REMARK 500 ASP A 75 78.65 -112.96 REMARK 500 PHE A 101 49.79 -144.02 REMARK 500 VAL A 102 -57.44 -161.00 REMARK 500 PHE A 108 -62.91 -100.68 REMARK 500 ASP A 124 -157.95 -167.59 REMARK 500 ALA A 126 -63.67 -21.00 REMARK 500 ASN A 131 -15.57 -48.59 REMARK 500 ASN A 155 89.48 -68.47 REMARK 500 ASP A 156 41.97 39.61 REMARK 500 VAL A 162 16.33 -158.90 REMARK 500 LEU A 166 71.05 47.22 REMARK 500 GLU A 174 136.78 -33.69 REMARK 500 TYR A 177 7.07 -153.44 REMARK 500 MET A 207 45.57 -86.75 REMARK 500 THR A 213 -101.20 -66.46 REMARK 500 LEU A 214 -36.57 -135.47 REMARK 500 ASP A 248 12.12 -65.42 REMARK 500 GLU A 278 -75.89 -44.65 REMARK 500 VAL A 279 -11.39 -48.68 REMARK 500 THR A 296 -73.10 -60.90 REMARK 500 PRO A 301 172.16 -56.68 REMARK 500 VAL A 322 29.20 -159.77 REMARK 500 HIS A 325 5.35 -66.39 REMARK 500 TYR A 339 -74.42 -71.56 REMARK 500 SER A 366 71.82 56.27 REMARK 500 PHE A 369 64.13 -61.93 REMARK 500 LYS A 370 -161.15 -75.27 REMARK 500 VAL A 409 12.53 -67.89 REMARK 500 MET A 416 -85.44 -82.37 REMARK 500 SER A 417 -8.51 -57.33 REMARK 500 GLU A 442 -86.30 -8.88 REMARK 500 VAL A 480 -11.08 -44.65 REMARK 500 PHE A 512 -80.88 -65.03 REMARK 500 ALA A 513 22.30 -67.41 REMARK 500 ARG A 516 131.85 -39.95 REMARK 500 TRP A 523 -81.04 -91.89 REMARK 500 GLU A 540 -37.97 -39.41 REMARK 500 ASP B 6 74.19 36.66 REMARK 500 ILE B 10 -66.82 -108.29 REMARK 500 ASN B 15 151.51 -46.78 REMARK 500 ASN B 19 -157.25 -127.57 REMARK 500 ALA B 23 95.42 -63.24 REMARK 500 REMARK 500 THIS ENTRY HAS 125 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 604 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 56 O REMARK 620 2 GLU A 56 OE1 90.0 REMARK 620 3 HIS A 59 O 69.8 159.2 REMARK 620 4 PRO A 60 O 131.7 133.1 64.3 REMARK 620 5 GLY A 61 O 136.9 70.9 120.6 63.8 REMARK 620 6 GLN A 63 OE1 160.4 86.6 114.0 60.8 59.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEA A 601 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 94 NE2 REMARK 620 2 HEA A 601 NA 93.7 REMARK 620 3 HEA A 601 NB 89.8 90.0 REMARK 620 4 HEA A 601 NC 90.7 175.4 88.5 REMARK 620 5 HEA A 601 ND 89.0 90.7 178.6 90.9 REMARK 620 6 HIS A 413 NE2 177.7 84.3 91.4 91.3 89.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 603 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 276 ND1 REMARK 620 2 HIS A 325 NE2 96.3 REMARK 620 3 HIS A 326 NE2 146.0 85.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 605 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 403 NE2 REMARK 620 2 ASP A 404 OD1 80.7 REMARK 620 3 GLU B 218 OE2 137.1 128.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEA A 602 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 411 NE2 REMARK 620 2 HEA A 602 NA 104.8 REMARK 620 3 HEA A 602 NB 100.0 86.0 REMARK 620 4 HEA A 602 NC 105.4 149.7 86.2 REMARK 620 5 HEA A 602 ND 105.2 87.3 154.8 87.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CUA B 301 CU2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 181 ND1 REMARK 620 2 CUA B 301 CU1 144.1 REMARK 620 3 CYS B 216 SG 131.0 54.2 REMARK 620 4 CYS B 220 SG 109.4 52.6 106.7 REMARK 620 5 MET B 227 SD 101.1 114.3 94.7 112.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CUA B 301 CU1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 216 SG REMARK 620 2 CUA B 301 CU2 56.5 REMARK 620 3 CYS B 220 SG 111.7 55.3 REMARK 620 4 HIS B 224 ND1 121.1 176.7 127.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU Y 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA Z 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN Z 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEA X 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEA X 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CUA Y 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PC1 P 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PC1 P 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1AR1 RELATED DB: PDB REMARK 900 STRUCTURE AT 2.7 ANGSTROM RESOLUTION OF THE PARACOCCUS REMARK 900 DENITRIFICANS TWO-SUBUNIT CYTOCHROME C OXIDASE COMPLEXED WITH AN REMARK 900 ANTIBODY FV FRAGMENT REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE OF VH AND VL IS DESCRIBED IN THE FOLLOWING REMARK 999 REFERENCE, REMARK 999 OSTERMEIER C. ET AL. (1995) PROTEINS 21: 74-77. REMARK 999 THE NCBI REFERENCE LOCUS FOR CHAIN H IS 2914143 REMARK 999 THE NCBI REFERENCE LOCUS FOR CHAIN L IS 2914144 DBREF 1QLE A 17 554 UNP P98002 CX1B_PARDE 17 554 DBREF 1QLE B 1 252 UNP P08306 COX2_PARDE 30 281 DBREF 1QLE C 1 273 UNP P06030 COX3_PARDE 1 273 DBREF 1QLE D 7 49 UNP P77921 P77921 8 50 DBREF 1QLE H 1 119 PDB 1QLE 1QLE 1 119 DBREF 1QLE L 1 108 PDB 1QLE 1QLE 1 108 SEQRES 1 A 538 GLY PHE PHE THR ARG TRP PHE MET SER THR ASN HIS LYS SEQRES 2 A 538 ASP ILE GLY ILE LEU TYR LEU PHE THR ALA GLY ILE VAL SEQRES 3 A 538 GLY LEU ILE SER VAL CYS PHE THR VAL TYR MET ARG MET SEQRES 4 A 538 GLU LEU GLN HIS PRO GLY VAL GLN TYR MET CYS LEU GLU SEQRES 5 A 538 GLY ALA ARG LEU ILE ALA ASP ALA SER ALA GLU CYS THR SEQRES 6 A 538 PRO ASN GLY HIS LEU TRP ASN VAL MET ILE THR TYR HIS SEQRES 7 A 538 GLY VAL LEU MET MET PHE PHE VAL VAL ILE PRO ALA LEU SEQRES 8 A 538 PHE GLY GLY PHE GLY ASN TYR PHE MET PRO LEU HIS ILE SEQRES 9 A 538 GLY ALA PRO ASP MET ALA PHE PRO ARG LEU ASN ASN LEU SEQRES 10 A 538 SER TYR TRP MET TYR VAL CYS GLY VAL ALA LEU GLY VAL SEQRES 11 A 538 ALA SER LEU LEU ALA PRO GLY GLY ASN ASP GLN MET GLY SEQRES 12 A 538 SER GLY VAL GLY TRP VAL LEU TYR PRO PRO LEU SER THR SEQRES 13 A 538 THR GLU ALA GLY TYR SER MET ASP LEU ALA ILE PHE ALA SEQRES 14 A 538 VAL HIS VAL SER GLY ALA SER SER ILE LEU GLY ALA ILE SEQRES 15 A 538 ASN ILE ILE THR THR PHE LEU ASN MET ARG ALA PRO GLY SEQRES 16 A 538 MET THR LEU PHE LYS VAL PRO LEU PHE ALA TRP SER VAL SEQRES 17 A 538 PHE ILE THR ALA TRP LEU ILE LEU LEU SER LEU PRO VAL SEQRES 18 A 538 LEU ALA GLY ALA ILE THR MET LEU LEU MET ASP ARG ASN SEQRES 19 A 538 PHE GLY THR GLN PHE PHE ASP PRO ALA GLY GLY GLY ASP SEQRES 20 A 538 PRO VAL LEU TYR GLN HIS ILE LEU TRP PHE PHE GLY HIS SEQRES 21 A 538 PRO GLU VAL TYR ILE ILE ILE LEU PRO GLY PHE GLY ILE SEQRES 22 A 538 ILE SER HIS VAL ILE SER THR PHE ALA LYS LYS PRO ILE SEQRES 23 A 538 PHE GLY TYR LEU PRO MET VAL LEU ALA MET ALA ALA ILE SEQRES 24 A 538 GLY ILE LEU GLY PHE VAL VAL TRP ALA HIS HIS MET TYR SEQRES 25 A 538 THR ALA GLY MET SER LEU THR GLN GLN ALA TYR PHE MET SEQRES 26 A 538 LEU ALA THR MET THR ILE ALA VAL PRO THR GLY ILE LYS SEQRES 27 A 538 VAL PHE SER TRP ILE ALA THR MET TRP GLY GLY SER ILE SEQRES 28 A 538 GLU PHE LYS THR PRO MET LEU TRP ALA PHE GLY PHE LEU SEQRES 29 A 538 PHE LEU PHE THR VAL GLY GLY VAL THR GLY VAL VAL LEU SEQRES 30 A 538 SER GLN ALA PRO LEU ASP ARG VAL TYR HIS ASP THR TYR SEQRES 31 A 538 TYR VAL VAL ALA HIS PHE HIS TYR VAL MET SER LEU GLY SEQRES 32 A 538 ALA VAL PHE GLY ILE PHE ALA GLY VAL TYR TYR TRP ILE SEQRES 33 A 538 GLY LYS MET SER GLY ARG GLN TYR PRO GLU TRP ALA GLY SEQRES 34 A 538 GLN LEU HIS PHE TRP MET MET PHE ILE GLY SER ASN LEU SEQRES 35 A 538 ILE PHE PHE PRO GLN HIS PHE LEU GLY ARG GLN GLY MET SEQRES 36 A 538 PRO ARG ARG TYR ILE ASP TYR PRO VAL GLU PHE ALA TYR SEQRES 37 A 538 TRP ASN ASN ILE SER SER ILE GLY ALA TYR ILE SER PHE SEQRES 38 A 538 ALA SER PHE LEU PHE PHE ILE GLY ILE VAL PHE TYR THR SEQRES 39 A 538 LEU PHE ALA GLY LYS ARG VAL ASN VAL PRO ASN TYR TRP SEQRES 40 A 538 ASN GLU HIS ALA ASP THR LEU GLU TRP THR LEU PRO SER SEQRES 41 A 538 PRO PRO PRO GLU HIS THR PHE GLU THR LEU PRO LYS ARG SEQRES 42 A 538 GLU ASP TRP ASP ARG SEQRES 1 B 252 GLN ASP VAL LEU GLY ASP LEU PRO VAL ILE GLY LYS PRO SEQRES 2 B 252 VAL ASN GLY GLY MET ASN PHE GLN PRO ALA SER SER PRO SEQRES 3 B 252 LEU ALA HIS ASP GLN GLN TRP LEU ASP HIS PHE VAL LEU SEQRES 4 B 252 TYR ILE ILE THR ALA VAL THR ILE PHE VAL CYS LEU LEU SEQRES 5 B 252 LEU LEU ILE CYS ILE VAL ARG PHE ASN ARG ARG ALA ASN SEQRES 6 B 252 PRO VAL PRO ALA ARG PHE THR HIS ASN THR PRO ILE GLU SEQRES 7 B 252 VAL ILE TRP THR LEU VAL PRO VAL LEU ILE LEU VAL ALA SEQRES 8 B 252 ILE GLY ALA PHE SER LEU PRO ILE LEU PHE ARG SER GLN SEQRES 9 B 252 GLU MET PRO ASN ASP PRO ASP LEU VAL ILE LYS ALA ILE SEQRES 10 B 252 GLY HIS GLN TRP TYR TRP SER TYR GLU TYR PRO ASN ASP SEQRES 11 B 252 GLY VAL ALA PHE ASP ALA LEU MET LEU GLU LYS GLU ALA SEQRES 12 B 252 LEU ALA ASP ALA GLY TYR SER GLU ASP GLU TYR LEU LEU SEQRES 13 B 252 ALA THR ASP ASN PRO VAL VAL VAL PRO VAL GLY LYS LYS SEQRES 14 B 252 VAL LEU VAL GLN VAL THR ALA THR ASP VAL ILE HIS ALA SEQRES 15 B 252 TRP THR ILE PRO ALA PHE ALA VAL LYS GLN ASP ALA VAL SEQRES 16 B 252 PRO GLY ARG ILE ALA GLN LEU TRP PHE SER VAL ASP GLN SEQRES 17 B 252 GLU GLY VAL TYR PHE GLY GLN CYS SER GLU LEU CYS GLY SEQRES 18 B 252 ILE ASN HIS ALA TYR MET PRO ILE VAL VAL LYS ALA VAL SEQRES 19 B 252 SER GLN GLU LYS TYR GLU ALA TRP LEU ALA GLY ALA LYS SEQRES 20 B 252 GLU GLU PHE ALA ALA SEQRES 1 C 273 ALA HIS VAL LYS ASN HIS ASP TYR GLN ILE LEU PRO PRO SEQRES 2 C 273 SER ILE TRP PRO PHE PHE GLY ALA ILE GLY ALA PHE VAL SEQRES 3 C 273 MET LEU THR GLY ALA VAL ALA TRP MET LYS GLY ILE THR SEQRES 4 C 273 PHE PHE GLY LEU PRO VAL GLU GLY PRO TRP MET PHE LEU SEQRES 5 C 273 ILE GLY LEU VAL GLY VAL LEU TYR VAL MET PHE GLY TRP SEQRES 6 C 273 TRP ALA ASP VAL VAL ASN GLU GLY GLU THR GLY GLU HIS SEQRES 7 C 273 THR PRO VAL VAL ARG ILE GLY LEU GLN TYR GLY PHE ILE SEQRES 8 C 273 LEU PHE ILE MET SER GLU VAL MET PHE PHE VAL ALA TRP SEQRES 9 C 273 PHE TRP ALA PHE ILE LYS ASN ALA LEU TYR PRO MET GLY SEQRES 10 C 273 PRO ASP SER PRO ILE LYS ASP GLY VAL TRP PRO PRO GLU SEQRES 11 C 273 GLY ILE VAL THR PHE ASP PRO TRP HIS LEU PRO LEU ILE SEQRES 12 C 273 ASN THR LEU ILE LEU LEU LEU SER GLY VAL ALA VAL THR SEQRES 13 C 273 TRP ALA HIS HIS ALA PHE VAL LEU GLU GLY ASP ARG LYS SEQRES 14 C 273 THR THR ILE ASN GLY LEU ILE VAL ALA VAL ILE LEU GLY SEQRES 15 C 273 VAL CYS PHE THR GLY LEU GLN ALA TYR GLU TYR SER HIS SEQRES 16 C 273 ALA ALA PHE GLY LEU ALA ASP THR VAL TYR ALA GLY ALA SEQRES 17 C 273 PHE TYR MET ALA THR GLY PHE HIS GLY ALA HIS VAL ILE SEQRES 18 C 273 ILE GLY THR ILE PHE LEU PHE VAL CYS LEU ILE ARG LEU SEQRES 19 C 273 LEU LYS GLY GLN MET THR GLN LYS GLN HIS VAL GLY PHE SEQRES 20 C 273 GLU ALA ALA ALA TRP TYR TRP HIS PHE VAL ASP VAL VAL SEQRES 21 C 273 TRP LEU PHE LEU PHE VAL VAL ILE TYR ILE TRP GLY ARG SEQRES 1 D 43 THR ASP HIS LYS HIS GLY GLU MET ASP ILE ARG HIS GLN SEQRES 2 D 43 GLN ALA THR PHE ALA GLY PHE ILE LYS GLY ALA THR TRP SEQRES 3 D 43 VAL SER ILE LEU SER ILE ALA VAL LEU VAL PHE LEU ALA SEQRES 4 D 43 LEU ALA ASN SER SEQRES 1 H 119 GLU VAL LYS LEU GLN GLU SER GLY GLY ASP LEU VAL GLN SEQRES 2 H 119 PRO GLY GLY SER LEU LYS LEU SER CYS ALA ALA SER GLY SEQRES 3 H 119 PHE THR PHE SER SER TYR THR MET SER TRP VAL ARG GLN SEQRES 4 H 119 THR PRO GLU LYS ARG LEU GLU TRP VAL ALA SER ILE ASN SEQRES 5 H 119 ASN GLY GLY GLY ARG THR TYR TYR PRO ASP THR VAL LYS SEQRES 6 H 119 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 H 119 LEU TYR LEU GLN MET SER SER LEU LYS SER GLU ASP THR SEQRES 8 H 119 ALA MET TYR TYR CYS VAL ARG HIS GLU TYR TYR TYR ALA SEQRES 9 H 119 MET ASP TYR TRP GLY GLN GLY THR THR VAL THR VAL SER SEQRES 10 H 119 SER ALA SEQRES 1 L 108 ASP ILE GLU LEU THR GLN THR PRO VAL SER LEU SER ALA SEQRES 2 L 108 SER VAL GLY GLU THR VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 108 GLU ASN ILE TYR SER TYR LEU ALA TRP TYR GLN GLN LYS SEQRES 4 L 108 GLN GLY LYS SER PRO GLN PHE LEU VAL TYR ASN ALA LYS SEQRES 5 L 108 THR LEU GLY GLU GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 108 GLY SER GLY THR GLN PHE SER LEU LYS ILE ASN SER LEU SEQRES 7 L 108 LEU PRO GLU ASP PHE GLY SER TYR TYR CYS GLN HIS HIS SEQRES 8 L 108 TYR GLY THR PRO PRO LEU THR PHE GLY GLY GLY THR LYS SEQRES 9 L 108 LEU GLU ILE LYS HET HEA A 601 60 HET HEA A 602 60 HET CU A 603 1 HET CA A 604 1 HET MN A 605 1 HET CUA B 301 2 HET PC1 C 301 54 HET PC1 C 302 54 HETNAM HEA HEME-A HETNAM CU COPPER (II) ION HETNAM CA CALCIUM ION HETNAM MN MANGANESE (II) ION HETNAM CUA DINUCLEAR COPPER ION HETNAM PC1 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE HETSYN PC1 3-SN-PHOSPHATIDYLCHOLINE FORMUL 7 HEA 2(C49 H56 FE N4 O6) FORMUL 9 CU CU 2+ FORMUL 10 CA CA 2+ FORMUL 11 MN MN 2+ FORMUL 12 CUA CU2 FORMUL 13 PC1 2(C44 H88 N O8 P) HELIX 1 AA1 ASN A 27 HIS A 59 1 33 HELIX 2 AA2 ASN A 83 PHE A 101 1 19 HELIX 3 AA3 VAL A 102 PHE A 108 1 7 HELIX 4 AA4 PHE A 115 ILE A 120 1 6 HELIX 5 AA5 PHE A 127 ALA A 151 1 25 HELIX 6 AA6 PRO A 169 GLU A 174 1 6 HELIX 7 AA7 TYR A 177 MET A 207 1 31 HELIX 8 AA8 PRO A 218 PHE A 251 1 34 HELIX 9 AA9 ASP A 257 GLY A 261 5 5 HELIX 10 AB1 PRO A 264 ALA A 298 1 35 HELIX 11 AB2 GLY A 304 GLY A 319 1 16 HELIX 12 AB3 PHE A 320 VAL A 321 5 2 HELIX 13 AB4 VAL A 322 GLY A 331 5 10 HELIX 14 AB5 SER A 333 ALA A 360 1 28 HELIX 15 AB6 THR A 371 GLN A 395 1 25 HELIX 16 AB7 GLN A 395 ARG A 400 1 6 HELIX 17 AB8 TYR A 407 ALA A 410 5 4 HELIX 18 AB9 HIS A 411 MET A 416 1 6 HELIX 19 AC1 GLY A 419 TYR A 429 1 11 HELIX 20 AC2 TRP A 431 GLY A 437 1 7 HELIX 21 AC3 PRO A 441 GLN A 469 1 29 HELIX 22 AC4 PRO A 479 GLU A 481 5 3 HELIX 23 AC5 PHE A 482 ALA A 513 1 32 HELIX 24 AC6 THR A 529 LEU A 534 5 6 HELIX 25 AC7 LYS A 548 ASP A 553 1 6 HELIX 26 AC8 SER B 25 PHE B 60 1 36 HELIX 27 AC9 ASN B 74 GLU B 105 1 32 HELIX 28 AD1 LEU B 144 GLY B 148 5 5 HELIX 29 AD2 SER B 150 TYR B 154 5 5 HELIX 30 AD3 SER B 235 PHE B 250 1 16 HELIX 31 AD4 ILE C 15 LYS C 36 1 22 HELIX 32 AD5 LEU C 52 THR C 75 1 24 HELIX 33 AD6 THR C 79 TYR C 114 1 36 HELIX 34 AD7 HIS C 139 GLU C 165 1 27 HELIX 35 AD8 ASP C 167 LEU C 175 1 9 HELIX 36 AD9 LEU C 175 ILE C 180 1 6 HELIX 37 AE1 ILE C 180 TYR C 193 1 14 HELIX 38 AE2 SER C 194 ALA C 196 5 3 HELIX 39 AE3 THR C 203 LEU C 235 1 33 HELIX 40 AE4 HIS C 244 VAL C 267 1 24 HELIX 41 AE5 ILE D 16 ALA D 47 1 32 HELIX 42 AE6 THR H 28 TYR H 32 5 5 HELIX 43 AE7 PRO H 61 LYS H 65 5 5 HELIX 44 AE8 LEU L 79 PHE L 83 5 5 SHEET 1 AA1 2 VAL B 113 ILE B 114 0 SHEET 2 AA1 2 LEU B 171 VAL B 172 1 O LEU B 171 N ILE B 114 SHEET 1 AA2 3 VAL B 162 PRO B 165 0 SHEET 2 AA2 3 PRO B 228 VAL B 234 1 O LYS B 232 N VAL B 162 SHEET 3 AA2 3 GLY B 210 GLN B 215 -1 N GLY B 214 O ILE B 229 SHEET 1 AA3 2 HIS B 181 THR B 184 0 SHEET 2 AA3 2 LYS B 191 ALA B 194 -1 O ALA B 194 N HIS B 181 SHEET 1 AA4 4 LYS H 3 GLN H 5 0 SHEET 2 AA4 4 LEU H 18 SER H 25 -1 O ALA H 23 N GLN H 5 SHEET 3 AA4 4 THR H 78 MET H 83 -1 O MET H 83 N LEU H 18 SHEET 4 AA4 4 THR H 69 ASP H 73 -1 N THR H 69 O GLN H 82 SHEET 1 AA5 6 LEU H 11 VAL H 12 0 SHEET 2 AA5 6 THR H 113 VAL H 116 1 O THR H 115 N VAL H 12 SHEET 3 AA5 6 ALA H 92 TYR H 95 -1 N ALA H 92 O VAL H 114 SHEET 4 AA5 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AA5 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA5 6 THR H 58 TYR H 59 -1 O TYR H 59 N SER H 50 SHEET 1 AA6 2 ARG H 98 GLU H 100 0 SHEET 2 AA6 2 ALA H 104 TYR H 107 -1 O ALA H 104 N GLU H 100 SHEET 1 AA7 4 THR L 5 THR L 7 0 SHEET 2 AA7 4 VAL L 19 ARG L 24 -1 O ARG L 24 N THR L 5 SHEET 3 AA7 4 GLN L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AA7 4 PHE L 62 SER L 67 -1 N SER L 63 O LYS L 74 SHEET 1 AA8 6 SER L 10 ALA L 13 0 SHEET 2 AA8 6 THR L 103 ILE L 107 1 O LYS L 104 N LEU L 11 SHEET 3 AA8 6 GLY L 84 HIS L 90 -1 N TYR L 86 O THR L 103 SHEET 4 AA8 6 LEU L 33 GLN L 38 -1 N GLN L 38 O SER L 85 SHEET 5 AA8 6 PRO L 44 TYR L 49 -1 O GLN L 45 N GLN L 37 SHEET 6 AA8 6 THR L 53 LEU L 54 -1 O THR L 53 N TYR L 49 SSBOND 1 CYS A 66 CYS A 80 1555 1555 2.04 SSBOND 2 CYS H 22 CYS H 96 1555 1555 2.03 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.05 LINK O GLU A 56 CA CA A 604 1555 1555 2.37 LINK OE1 GLU A 56 CA CA A 604 1555 1555 2.37 LINK O HIS A 59 CA CA A 604 1555 1555 2.26 LINK O PRO A 60 CA CA A 604 1555 1555 3.16 LINK O GLY A 61 CA CA A 604 1555 1555 2.28 LINK OE1 GLN A 63 CA CA A 604 1555 1555 2.30 LINK NE2 HIS A 94 FE HEA A 601 1555 1555 2.23 LINK ND1 HIS A 276 CU CU A 603 1555 1555 2.14 LINK NE2 HIS A 325 CU CU A 603 1555 1555 2.17 LINK NE2 HIS A 326 CU CU A 603 1555 1555 2.10 LINK NE2 HIS A 403 MN MN A 605 1555 1555 2.16 LINK OD1 ASP A 404 MN MN A 605 1555 1555 2.37 LINK NE2 HIS A 411 FE HEA A 602 1555 1555 2.20 LINK NE2 HIS A 413 FE HEA A 601 1555 1555 2.17 LINK MN MN A 605 OE2 GLU B 218 1555 1555 2.23 LINK ND1 HIS B 181 CU2 CUA B 301 1555 1555 2.12 LINK SG CYS B 216 CU2 CUA B 301 1555 1555 2.20 LINK SG CYS B 216 CU1 CUA B 301 1555 1555 2.14 LINK SG CYS B 220 CU2 CUA B 301 1555 1555 2.13 LINK SG CYS B 220 CU1 CUA B 301 1555 1555 2.06 LINK ND1 HIS B 224 CU1 CUA B 301 1555 1555 2.04 LINK SD MET B 227 CU2 CUA B 301 1555 1555 2.60 CISPEP 1 PRO A 168 PRO A 169 0 -0.43 CISPEP 2 SER A 536 PRO A 537 0 0.15 CISPEP 3 SER C 120 PRO C 121 0 0.58 CISPEP 4 THR L 7 PRO L 8 0 -0.71 CISPEP 5 PRO L 95 PRO L 96 0 0.60 SITE 1 AC1 3 HIS A 276 HIS A 325 HIS A 326 SITE 1 AC2 5 GLU A 56 HIS A 59 PRO A 60 GLY A 61 SITE 2 AC2 5 GLN A 63 SITE 1 AC3 3 HIS A 403 ASP A 404 GLU B 218 SITE 1 AC4 26 LEU A 36 ALA A 39 GLY A 40 VAL A 47 SITE 2 AC4 26 THR A 50 ARG A 54 TRP A 87 ILE A 91 SITE 3 AC4 26 HIS A 94 MET A 98 VAL A 103 ALA A 106 SITE 4 AC4 26 GLY A 163 TRP A 164 TYR A 406 VAL A 409 SITE 5 AC4 26 PHE A 412 HIS A 413 MET A 416 SER A 417 SITE 6 AC4 26 VAL A 421 MET A 452 ARG A 473 ARG A 474 SITE 7 AC4 26 TYR A 475 PHE A 500 SITE 1 AC5 22 TRP A 164 VAL A 279 TYR A 280 HIS A 325 SITE 2 AC5 22 HIS A 326 ALA A 348 THR A 351 GLY A 387 SITE 3 AC5 22 GLY A 390 VAL A 391 LEU A 393 SER A 394 SITE 4 AC5 22 ASP A 399 HIS A 403 VAL A 408 HIS A 411 SITE 5 AC5 22 PHE A 412 VAL A 415 ARG A 473 ARG A 474 SITE 6 AC5 22 VAL B 45 ILE B 88 SITE 1 AC6 6 HIS B 181 CYS B 216 GLU B 218 CYS B 220 SITE 2 AC6 6 HIS B 224 MET B 227 SITE 1 AC7 13 LEU A 233 TRP A 323 GLN A 336 TYR A 339 SITE 2 AC7 13 ARG B 198 VAL C 102 TRP C 106 LYS C 110 SITE 3 AC7 13 TYR C 114 PRO C 121 ASP C 124 SER D 37 SITE 4 AC7 13 ASN D 48 SITE 1 AC8 20 LEU C 55 TRP C 66 VAL C 69 VAL C 70 SITE 2 AC8 20 GLY C 73 GLU C 74 HIS C 78 LEU C 86 SITE 3 AC8 20 PHE C 90 ILE C 222 ILE C 225 PHE C 226 SITE 4 AC8 20 VAL C 229 ARG C 233 GLN C 238 THR C 240 SITE 5 AC8 20 GLN C 243 HIS C 244 VAL C 245 GLY C 246 CRYST1 205.200 205.200 81.100 90.00 90.00 90.00 P 4 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004873 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004873 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012330 0.00000