PDB Short entry for 1QMQ HEADER OXIDOREDUCTASE 05-OCT-99 1QMQ TITLE OPTICAL DETECTION OF CYTOCHROME P450 BY SENSITIZER-LINKED SUBSTRATES COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME P450; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CAMPHOR 5-MONOOXYGENASE; COMPND 5 EC: 1.14.15.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 3 ORGANISM_TAXID: 303; SOURCE 4 GENE: CYP101; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: TBY; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PUS200 KEYWDS OXIDOREDUCTASE, OXIDOREDUCTASE(OXYGENASE), RU-SUBSTRATE EXPDTA X-RAY DIFFRACTION AUTHOR B.R.CRANE,I.J.DMOCHOWSKI,H.B.GRAY REVDAT 6 13-DEC-23 1QMQ 1 REMARK REVDAT 5 03-OCT-18 1QMQ 1 COMPND HET HETNAM FORMUL REVDAT 5 2 1 SITE ATOM REVDAT 4 28-MAR-12 1QMQ 1 KEYWDS JRNL REMARK VERSN REVDAT 4 2 1 FORMUL LINK SITE SCALE3 REVDAT 4 3 1 HETATM CONECT MASTER REVDAT 3 24-FEB-09 1QMQ 1 VERSN REVDAT 2 31-OCT-00 1QMQ 1 CONECT REVDAT 1 06-OCT-00 1QMQ 0 JRNL AUTH I.J.DMOCHOWSKI,B.R.CRANE,J.J.WILKER,J.R.WINKLER,H.B.GRAY JRNL TITL OPTICAL DETECTION OF CYTOCHROME P450 BY SENSITIZER-LINKED JRNL TITL 2 SUBSTRATES JRNL REF PROC.NATL.ACAD.SCI.USA V. 96 12987 1999 JRNL REFN ISSN 0027-8424 JRNL PMID 10557259 JRNL DOI 10.1073/PNAS.96.23.12987 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 0.4 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1101862.110 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 62629 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.100 REMARK 3 FREE R VALUE TEST SET COUNT : 5102 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.61 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4925 REMARK 3 BIN R VALUE (WORKING SET) : 0.2630 REMARK 3 BIN FREE R VALUE : 0.2760 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 8.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 450 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.013 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3212 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 181 REMARK 3 SOLVENT ATOMS : 425 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.24000 REMARK 3 B22 (A**2) : -0.98000 REMARK 3 B33 (A**2) : -3.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.19 REMARK 3 ESD FROM SIGMAA (A) : 0.15 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.21 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.17 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.750 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 0.520 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 0.920 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 0.710 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 1.110 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 59.08 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : PARAM19X.HEME REMARK 3 PARAMETER FILE 3 : WATER.PARAM REMARK 3 PARAMETER FILE 4 : WIRE.PAR REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : WIRE_CLEAN.TOP REMARK 3 TOPOLOGY FILE 4 : WIRE_CLEAN2.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1QMQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-OCT-99. REMARK 100 THE DEPOSITION ID IS D_1290004186. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-99 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.08 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : PLATINUM MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64764 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 37.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.29200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS 0.4 REMARK 200 STARTING MODEL: PDB ENTRY 2CPP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.69500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.86500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.23500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.86500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.69500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.23500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 CHAIN A ENGINEERED MUTATION CYS334ALA REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 1 REMARK 465 THR A 2 REMARK 465 GLU A 3 REMARK 465 THR A 4 REMARK 465 ILE A 5 REMARK 465 GLN A 6 REMARK 465 SER A 7 REMARK 465 ASN A 8 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 10 48.54 72.08 REMARK 500 ASN A 30 64.68 -163.18 REMARK 500 ALA A 92 -35.46 -162.13 REMARK 500 TYR A 154 -52.68 -134.59 REMARK 500 ARG A 186 59.61 -147.33 REMARK 500 ARG A 186 59.10 -150.07 REMARK 500 LEU A 250 -80.63 -98.86 REMARK 500 LEU A 250 -79.53 -98.86 REMARK 500 LEU A 294 -1.38 -144.90 REMARK 500 ASP A 297 -162.34 -107.05 REMARK 500 CYS A 357 120.05 -37.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2039 DISTANCE = 6.29 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 417 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 357 SG REMARK 620 2 HEM A 417 NA 96.7 REMARK 620 3 HEM A 417 NB 88.4 89.6 REMARK 620 4 HEM A 417 NC 87.1 176.3 90.1 REMARK 620 5 HEM A 417 ND 95.9 90.2 175.7 89.8 REMARK 620 6 HOH A2285 O 172.9 89.2 87.6 87.0 88.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 421 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 422 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 423 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 424 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 425 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LRB A 418 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DRB A 419 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DZ9 RELATED DB: PDB REMARK 900 OXO? COMPLEX OF P450CAM FROM PSEUDOMONAS PUTIDA REMARK 900 RELATED ID: 5CP4 RELATED DB: PDB REMARK 900 CRYOGENIC STRUCTURE OF P450CAM REMARK 900 RELATED ID: 1PHA RELATED DB: PDB REMARK 900 CYTOCHROME P450-CAM (CAMPHOR 5-MONOXYGENASE) COMPLEX WITH CAMPHOR REMARK 900 (PLUS-ISOMER) REMARK 900 RELATED ID: 2H7Q RELATED DB: PDB REMARK 900 CYTOCHROME P450CAM COMPLEXED WITH IMIDAZOLE REMARK 900 RELATED ID: 1DZ6 RELATED DB: PDB REMARK 900 FERROUS P450CAM FROM PSEUDOMONAS PUTIDA REMARK 900 RELATED ID: 1T88 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE FERROUS CYTOCHROME P450CAM ( C334A) REMARK 900 RELATED ID: 2CPP RELATED DB: PDB REMARK 900 CYTOCHROME P450CAM (CAMPHOR MONOOXYGENASE) WITH BOUND CAMPHOR REMARK 900 RELATED ID: 1P2Y RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CYTOCHROME P450CAM IN COMPLEX WITH (S)-(-)- REMARK 900 NICOTINE REMARK 900 RELATED ID: 6CPP RELATED DB: PDB REMARK 900 CYTOCHROME P450CAM (CAMPHOR MONOOXYGENASE) - CAMPHANE COMPLEX REMARK 900 RELATED ID: 5CPP RELATED DB: PDB REMARK 900 CYTOCHROME P450CAM (CAMPHOR MONOOXYGENASE) - ADAMANTANONE COMPLEX REMARK 900 RELATED ID: 1IWK RELATED DB: PDB REMARK 900 PUTIDAREDOXIN-BINDING STABLILIZES AN ACTIVE CONFORMER OFCYTOCHROME REMARK 900 P450CAM IN ITS REDUCED STATE; CRYSTAL STRUCTUREOF MUTANT(112K) REMARK 900 CYTOCHROME P450CAM REMARK 900 RELATED ID: 4CP4 RELATED DB: PDB REMARK 900 CYTOCHROME P450CAM (CAMPHOR MONOOXYGENASE) WITH BOUND CAMPHOR REMARK 900 RELATED ID: 2A1M RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FERROUS DIOXYGEN COMPLEX OF WILD- REMARK 900 TYPECYTOCHROME P450CAM REMARK 900 RELATED ID: 1J51 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CYTOCHROME P450CAM MUTANT(F87W/Y96F /V247L/ REMARK 900 C334A) WITH 1,3,5-TRICHLOROBENZENE REMARK 900 RELATED ID: 1GEB RELATED DB: PDB REMARK 900 X-RAY CRYSTAL STRUCTURE AND CATALYTIC PROPERTIES OFTHR252ILE MUTANT REMARK 900 OF CYTOCHROME P450CAM REMARK 900 RELATED ID: 2FE6 RELATED DB: PDB REMARK 900 P450CAM FROM PSEUDOMONAS PUTIDA RECONSTITUTED WITH REMARK 900 MANGANICPROTOPORPHYRIN IX REMARK 900 RELATED ID: 1RF9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CYTOCHROME P450-CAM WITH A FLUORESCENTPROBE D- REMARK 900 4-AD (ADAMANTANE-1-CARBOXYLIC ACID- 5-DIMETHYLAMINO-NAPHTHALENE-1- REMARK 900 SULFONYLAMINO-BUTYL-AMIDE) REMARK 900 RELATED ID: 1T87 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE FERROUS CO-BOUND CYTOCHROMEP450CAM (C334A) REMARK 900 RELATED ID: 1AKD RELATED DB: PDB REMARK 900 CYTOCHROME P450CAM FROM PSEUDOMONAS PUTIDA, COMPLEXED WITH 1S- REMARK 900 CAMPHOR REMARK 900 RELATED ID: 2H7R RELATED DB: PDB REMARK 900 L244A MUTANT OF CYTOCHROME P450CAM COMPLEXED WITH IMIDAZOLE REMARK 900 RELATED ID: 1DZ4 RELATED DB: PDB REMARK 900 FERRIC P450CAM FROM PSEUDOMONAS PUTIDA REMARK 900 RELATED ID: 8CPP RELATED DB: PDB REMARK 900 CYTOCHROME P450CAM (CAMPHOR MONOOXYGENASE) - THIOCAMPHOR COMPLEX REMARK 900 RELATED ID: 1CP4 RELATED DB: PDB REMARK 900 CYTOCHROME P450=CAM= (CAMPHOR MONOOXYGENASE) COMPLEX WITH PHENYL REMARK 900 RADICAL REMARK 900 RELATED ID: 4CPP RELATED DB: PDB REMARK 900 CYTOCHROME P450CAM (CAMPHOR MONOOXYGENASE) - ADAMANTANE COMPLEX REMARK 900 RELATED ID: 1PHC RELATED DB: PDB REMARK 900 CYTOCHROME P450-CAM (CAMPHOR 5-MONOXYGENASE) REMARK 900 RELATED ID: 1O76 RELATED DB: PDB REMARK 900 CYANIDE COMPLEX OF P450CAM FROM PSEUDOMONAS PUTIDA REMARK 900 RELATED ID: 2H7S RELATED DB: PDB REMARK 900 L244A MUTANT OF CYTOCHROME P450CAM REMARK 900 RELATED ID: 1PHB RELATED DB: PDB REMARK 900 CYTOCHROME P450-CAM (CAMPHOR 5-MONOXYGENASE) COMPLEX WITH CAMPHOR REMARK 900 (MINUS-ISOMER) REMARK 900 RELATED ID: 1IWI RELATED DB: PDB REMARK 900 PUTIDAREDOXIN-BINDING STABLILIZES AN ACTIVE CONFORMER OFCYTOCHROME REMARK 900 P450CAM IN ITS REDUCED STATE; CRYSTAL STRUCTUREOF CYTOCHROME P450CAM REMARK 900 RELATED ID: 6CP4 RELATED DB: PDB REMARK 900 P450CAM D251N MUTANT REMARK 900 RELATED ID: 1C8J RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CYTOCHROME P450CAM MUTANT (F87W/ Y96F) REMARK 900 RELATED ID: 1PHD RELATED DB: PDB REMARK 900 CYTOCHROME P450-CAM (CAMPHOR 5-MONOXYGENASE) COMPLEX WITH 2-PHENYL REMARK 900 IMIDAZOLE REMARK 900 RELATED ID: 1PHG RELATED DB: PDB REMARK 900 CYTOCHROME P450-CAM (CAMPHOR 5-MONOXYGENASE) COMPLEX WITH METYAPONE REMARK 900 RELATED ID: 1NOO RELATED DB: PDB REMARK 900 CYTOCHROME P450CAM COMPLEXED WITH 5-EXO-HYDROXYCAMPHOR REMARK 900 RELATED ID: 1UYU RELATED DB: PDB REMARK 900 XENON COMPLEX OF WILDTYPE P450CAM FROM PSEUDOMONAS PUTIDA REMARK 900 RELATED ID: 7CPP RELATED DB: PDB REMARK 900 CYTOCHROME P450CAM (CAMPHOR MONOOXYGENASE) - NORCAMPHOR COMPLEX REMARK 900 RELATED ID: 1GJM RELATED DB: PDB REMARK 900 COVALENT ATTACHMENT OF AN ELECTROACTIVE SULPHYDRYL REAGENT IN THE REMARK 900 ACTIVE SITE OF CYTOCHROME P450CAM REMARK 900 RELATED ID: 1DZ8 RELATED DB: PDB REMARK 900 OXYGEN COMPLEX OF P450CAM FROM PSEUDOMONAS PUTIDA REMARK 900 RELATED ID: 2FEU RELATED DB: PDB REMARK 900 P450CAM FROM PSEUDOMONAS PUTIDA RECONSTITUTED WITH REMARK 900 MANGANICPROTOPORPHYRIN IX REMARK 900 RELATED ID: 1T86 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE FERROUS CYTOCHROME P450CAM MUTANT(L358P/ REMARK 900 C334A) REMARK 900 RELATED ID: 2CP4 RELATED DB: PDB REMARK 900 CYTOCHROME P450CAM (CAMPHOR MONOOXYGENASE) MUTANT WITH THR 252 REMARK 900 REPLACED BY ALA (T252A) WITH BOUND CAMPHOR REMARK 900 RELATED ID: 1T85 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE FERROUS CO-BOUND CYTOCHROMEP450CAM MUTANT REMARK 900 (L358P/C334A) REMARK 900 RELATED ID: 1LWL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CYTOCHROME P450-CAM WITH A FLUORESCENTPROBE D- REMARK 900 8-AD (ADAMANTANE-1-CARBOXYLIC ACID- 5-DIMETHYLAMINO-NAPHTHALENE-1- REMARK 900 SULFONYLAMINO-OCTYL-AMIDE) REMARK 900 RELATED ID: 1PHF RELATED DB: PDB REMARK 900 CYTOCHROME P450-CAM (CAMPHOR 5-MONOXYGENASE) COMPLEX WITH CAMPHOR 4- REMARK 900 PHENYL IMIDAZOLE REMARK 900 RELATED ID: 1YRD RELATED DB: PDB REMARK 900 X-RAY CRYSTAL STRUCTURE OF PERDEUTERATED CYTOCHROME P450CAM REMARK 900 RELATED ID: 1K2O RELATED DB: PDB REMARK 900 CYTOCHROME P450CAM WITH BOUND BIS(2,2'-BIPYRIDINE)-(5 -METHYL-2-2'- REMARK 900 BIPYRIDINE)-C2-ADAMANTANE RUTHENIUM (II) REMARK 900 RELATED ID: 1GEK RELATED DB: PDB REMARK 900 STRUCTURAL CHARACTERIZATION OF N-BUTYL-ISOCYANIDE COMPLEXESOF REMARK 900 CYTOCHROMES P450NOR AND P450CAM REMARK 900 RELATED ID: 3CPP RELATED DB: PDB REMARK 900 CYTOCHROME P450CAM (CAMPHOR MONOOXYGENASE) - REDUCED CAMPHOR - REMARK 900 CARBONMONOXIDE TERNARY COMPLEX REMARK 900 RELATED ID: 1RE9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CYTOCHROME P450-CAM WITH A FLUORESCENTPROBE D- REMARK 900 8-AD (ADAMANTANE-1-CARBOXYLIC ACID- 5-DIMETHYLAMINO-NAPHTHALENE-1- REMARK 900 SULFONYLAMINO-OCTYL-AMIDE) REMARK 900 RELATED ID: 1PHE RELATED DB: PDB REMARK 900 CYTOCHROME P450-CAM (CAMPHOR 5-MONOXYGENASE) COMPLEX WITH 2-PHENYL REMARK 900 IMIDAZOLE REMARK 900 RELATED ID: 2A1O RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FERROUS DIOXYGEN COMPLEX OF T252ACYTOCHROME REMARK 900 P450CAM REMARK 900 RELATED ID: 2A1N RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FERROUS DIOXYGEN COMPLEX OF D251NCYTOCHROME REMARK 900 P450CAM REMARK 900 RELATED ID: 2FER RELATED DB: PDB REMARK 900 P450CAM FROM PSEUDOMONAS PUTIDA RECONSTITUTED WITH REMARK 900 MANGANICPROTOPORPHYRIN IX REMARK 900 RELATED ID: 1P7R RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF REDUCED, CO-EXPOSED COMPLEX OFCYTOCHROME REMARK 900 P450CAM WITH (S)-(-)-NICOTINE REMARK 900 RELATED ID: 1IWJ RELATED DB: PDB REMARK 900 PUTIDAREDOXIN-BINDING STABLILIZES AN ACTIVE CONFORMER OFCYTOCHROME REMARK 900 P450CAM IN ITS REDUCED STATE; CRYSTAL STRUCTUREOF MUTANT(109K) REMARK 900 CYTOCHROME P450CAM REMARK 900 RELATED ID: 1GEM RELATED DB: PDB REMARK 900 STRUCTURAL CHARACTERIZATION OF N-BUTYL-ISOCYANIDE COMPLEXESOF REMARK 900 CYTOCHROMES P450NOR AND P450CAM REMARK 900 RELATED ID: 3CP4 RELATED DB: PDB REMARK 900 CYTOCHROME P450CAM (CAMPHOR MONOOXYGENASE) WITH BOUND ADAMANTANE REMARK 900 (11-WEEK SOAK) REMARK 900 RELATED ID: 1YRC RELATED DB: PDB REMARK 900 X-RAY CRYSTAL STRUCTURE OF HYDROGENATED CYTOCHROME P450CAM REMARK 900 RELATED ID: 1MPW RELATED DB: PDB REMARK 900 MOLECULAR RECOGNITION IN (+)-A-PINENE OXIDATION BYCYTOCHROME P450CAM DBREF 1QMQ A 1 414 UNP P00183 CPXA_PSEPU 1 414 SEQADV 1QMQ ALA A 334 UNP P00183 CYS 334 ENGINEERED MUTATION SEQRES 1 A 414 THR THR GLU THR ILE GLN SER ASN ALA ASN LEU ALA PRO SEQRES 2 A 414 LEU PRO PRO HIS VAL PRO GLU HIS LEU VAL PHE ASP PHE SEQRES 3 A 414 ASP MET TYR ASN PRO SER ASN LEU SER ALA GLY VAL GLN SEQRES 4 A 414 GLU ALA TRP ALA VAL LEU GLN GLU SER ASN VAL PRO ASP SEQRES 5 A 414 LEU VAL TRP THR ARG CYS ASN GLY GLY HIS TRP ILE ALA SEQRES 6 A 414 THR ARG GLY GLN LEU ILE ARG GLU ALA TYR GLU ASP TYR SEQRES 7 A 414 ARG HIS PHE SER SER GLU CYS PRO PHE ILE PRO ARG GLU SEQRES 8 A 414 ALA GLY GLU ALA TYR ASP PHE ILE PRO THR SER MET ASP SEQRES 9 A 414 PRO PRO GLU GLN ARG GLN PHE ARG ALA LEU ALA ASN GLN SEQRES 10 A 414 VAL VAL GLY MET PRO VAL VAL ASP LYS LEU GLU ASN ARG SEQRES 11 A 414 ILE GLN GLU LEU ALA CYS SER LEU ILE GLU SER LEU ARG SEQRES 12 A 414 PRO GLN GLY GLN CYS ASN PHE THR GLU ASP TYR ALA GLU SEQRES 13 A 414 PRO PHE PRO ILE ARG ILE PHE MET LEU LEU ALA GLY LEU SEQRES 14 A 414 PRO GLU GLU ASP ILE PRO HIS LEU LYS TYR LEU THR ASP SEQRES 15 A 414 GLN MET THR ARG PRO ASP GLY SER MET THR PHE ALA GLU SEQRES 16 A 414 ALA LYS GLU ALA LEU TYR ASP TYR LEU ILE PRO ILE ILE SEQRES 17 A 414 GLU GLN ARG ARG GLN LYS PRO GLY THR ASP ALA ILE SER SEQRES 18 A 414 ILE VAL ALA ASN GLY GLN VAL ASN GLY ARG PRO ILE THR SEQRES 19 A 414 SER ASP GLU ALA LYS ARG MET CYS GLY LEU LEU LEU VAL SEQRES 20 A 414 GLY GLY LEU ASP THR VAL VAL ASN PHE LEU SER PHE SER SEQRES 21 A 414 MET GLU PHE LEU ALA LYS SER PRO GLU HIS ARG GLN GLU SEQRES 22 A 414 LEU ILE GLU ARG PRO GLU ARG ILE PRO ALA ALA CYS GLU SEQRES 23 A 414 GLU LEU LEU ARG ARG PHE SER LEU VAL ALA ASP GLY ARG SEQRES 24 A 414 ILE LEU THR SER ASP TYR GLU PHE HIS GLY VAL GLN LEU SEQRES 25 A 414 LYS LYS GLY ASP GLN ILE LEU LEU PRO GLN MET LEU SER SEQRES 26 A 414 GLY LEU ASP GLU ARG GLU ASN ALA ALA PRO MET HIS VAL SEQRES 27 A 414 ASP PHE SER ARG GLN LYS VAL SER HIS THR THR PHE GLY SEQRES 28 A 414 HIS GLY SER HIS LEU CYS LEU GLY GLN HIS LEU ALA ARG SEQRES 29 A 414 ARG GLU ILE ILE VAL THR LEU LYS GLU TRP LEU THR ARG SEQRES 30 A 414 ILE PRO ASP PHE SER ILE ALA PRO GLY ALA GLN ILE GLN SEQRES 31 A 414 HIS LYS SER GLY ILE VAL SER GLY VAL GLN ALA LEU PRO SEQRES 32 A 414 LEU VAL TRP ASP PRO ALA THR THR LYS ALA VAL HET HEM A 417 43 HET DRB A 418 59 HET DRB A 419 59 HET ACT A 421 4 HET ACT A 422 4 HET ACT A 423 4 HET ACT A 424 4 HET ACT A 425 4 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM DRB DELTA-BIS(2,2'-BIPYRIDINE)-(5-METHYL-2-2'-BIPYRIDINE)- HETNAM 2 DRB C9-ADAMANTANE RUTHENIUM (II) HETNAM ACT ACETATE ION HETSYN HEM HEME FORMUL 2 HEM C34 H32 FE N4 O4 FORMUL 3 DRB 2(C50 H57 N7 O RU 2+) FORMUL 5 ACT 5(C2 H3 O2 1-) FORMUL 10 HOH *425(H2 O) HELIX 1 1 PRO A 19 LEU A 22 5 4 HELIX 2 2 ASN A 33 ALA A 36 5 4 HELIX 3 3 GLY A 37 ALA A 43 1 7 HELIX 4 4 VAL A 44 GLU A 47 5 4 HELIX 5 5 ARG A 57 GLY A 61 5 5 HELIX 6 6 ARG A 67 ASP A 77 1 11 HELIX 7 7 PRO A 89 GLU A 94 1 6 HELIX 8 8 PRO A 106 GLY A 120 1 15 HELIX 9 9 GLY A 120 ARG A 143 1 24 HELIX 10 10 PHE A 150 TYR A 154 1 5 HELIX 11 11 GLU A 156 GLY A 168 1 13 HELIX 12 12 PRO A 170 GLU A 172 5 3 HELIX 13 13 ASP A 173 ARG A 186 1 14 HELIX 14 14 THR A 192 LYS A 214 1 23 HELIX 15 15 ASP A 218 ASN A 225 1 8 HELIX 16 16 THR A 234 GLY A 248 1 15 HELIX 17 17 LEU A 250 SER A 267 1 18 HELIX 18 18 SER A 267 ARG A 277 1 11 HELIX 19 19 ARG A 280 PHE A 292 1 13 HELIX 20 20 PRO A 321 ASP A 328 5 8 HELIX 21 21 GLY A 359 ILE A 378 1 20 HELIX 22 22 ASP A 407 THR A 411 5 5 SHEET 1 A 5 LEU A 53 THR A 56 0 SHEET 2 A 5 HIS A 62 ALA A 65 -1 O HIS A 62 N THR A 56 SHEET 3 A 5 GLN A 317 LEU A 320 1 O GLN A 317 N TRP A 63 SHEET 4 A 5 ASP A 297 LEU A 301 -1 O ASP A 297 N LEU A 320 SHEET 5 A 5 PHE A 81 SER A 82 -1 O SER A 82 N ILE A 300 SHEET 1 B 3 GLN A 147 ASN A 149 0 SHEET 2 B 3 PRO A 403 VAL A 405 -1 O LEU A 404 N CYS A 148 SHEET 3 B 3 SER A 382 ILE A 383 -1 O SER A 382 N VAL A 405 SHEET 1 C 2 GLN A 227 VAL A 228 0 SHEET 2 C 2 ARG A 231 PRO A 232 -1 O ARG A 231 N VAL A 228 SHEET 1 D 2 TYR A 305 PHE A 307 0 SHEET 2 D 2 VAL A 310 LEU A 312 -1 O VAL A 310 N PHE A 307 SHEET 1 E 2 HIS A 391 LYS A 392 0 SHEET 2 E 2 GLY A 398 VAL A 399 -1 O GLY A 398 N LYS A 392 LINK SG CYS A 357 FE HEM A 417 1555 1555 2.31 LINK FE HEM A 417 O HOH A2285 1555 1555 2.07 CISPEP 1 ILE A 88 PRO A 89 0 -0.39 CISPEP 2 ILE A 99 PRO A 100 0 0.04 CISPEP 3 PRO A 105 PRO A 106 0 0.11 SITE 1 AC1 5 SER A 267 PRO A 268 GLU A 269 HIS A 270 SITE 2 AC1 5 HOH A2423 SITE 1 AC2 8 ARG A 112 ASP A 188 LEU A 356 CYS A 357 SITE 2 AC2 8 GLN A 360 HIS A 361 HOH A2169 HOH A2424 SITE 1 AC3 9 LEU A 45 GLN A 46 GLU A 47 VAL A 50 SITE 2 AC3 9 PRO A 51 ASP A 52 THR A 66 ARG A 67 SITE 3 AC3 9 ARG A 330 SITE 1 AC4 5 MET A 184 PHE A 193 DRB A 418 DRB A 419 SITE 2 AC4 5 HOH A2425 SITE 1 AC5 4 ARG A 271 GLN A 272 PRO A 379 ASP A 380 SITE 1 AC6 22 PRO A 100 THR A 101 GLN A 108 ARG A 112 SITE 2 AC6 22 LEU A 245 GLY A 248 GLY A 249 THR A 252 SITE 3 AC6 22 ASP A 297 ARG A 299 GLN A 322 THR A 349 SITE 4 AC6 22 PHE A 350 GLY A 351 HIS A 355 CYS A 357 SITE 5 AC6 22 GLY A 359 DRB A 419 HOH A2146 HOH A2285 SITE 6 AC6 22 HOH A2420 HOH A2421 SITE 1 AC7 10 TYR A 29 TYR A 96 THR A 101 THR A 185 SITE 2 AC7 10 ARG A 186 PRO A 187 GLY A 248 ASP A 297 SITE 3 AC7 10 ILE A 395 ACT A 424 SITE 1 AC8 15 TYR A 29 ASN A 59 PHE A 87 ILE A 88 SITE 2 AC8 15 PRO A 89 ALA A 92 TYR A 96 THR A 101 SITE 3 AC8 15 PRO A 187 GLY A 248 ASP A 297 ILE A 395 SITE 4 AC8 15 HEM A 417 ACT A 424 HOH A2285 CRYST1 65.390 74.470 91.730 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015293 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013428 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010902 0.00000