PDB Short entry for 1QTY HEADER HORMONE/GROWTH FACTOR RECEPTOR 29-JUN-99 1QTY TITLE VASCULAR ENDOTHELIAL GROWTH FACTOR IN COMPLEX WITH DOMAIN 2 OF THE TITLE 2 FLT-1 RECEPTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: VASCULAR ENDOTHELIAL GROWTH FACTOR; COMPND 3 CHAIN: V, W, R, S; COMPND 4 FRAGMENT: RECEPTOR BINDING DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: FMS-LIKE TYROSINE KINASE 1; COMPND 8 CHAIN: X, Y, T, U; COMPND 9 FRAGMENT: DOMAIN 2; COMPND 10 SYNONYM: FLT-1; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPLEX (GROWTH FACTOR-RECEPTOR), FLT-1, VEGF RECEPTOR, RECEPTOR KEYWDS 2 TYROSINE KINASE, CYSTINE KNOT, GLYCOPROTEIN, IMMUNOGLOBULIN-LIKE KEYWDS 3 DOMAIN, I-SET, HORMONE/GROWTH FACTOR RECEPTOR, HORMONE-GROWTH FACTOR KEYWDS 4 RECEPTOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.WIESMANN,A.M.DE VOS REVDAT 4 16-AUG-23 1QTY 1 REMARK REVDAT 3 24-FEB-09 1QTY 1 VERSN REVDAT 2 19-APR-00 1QTY 1 CRYST1 REMARK REVDAT 1 12-JAN-00 1QTY 0 JRNL AUTH M.A.STAROVASNIK,H.W.CHRISTINGER,C.WIESMANN,M.A.CHAMPE, JRNL AUTH 2 A.M.DE VOS,N.J.SKELTON JRNL TITL SOLUTION STRUCTURE OF THE VEGF-BINDING DOMAIN OF FLT-1: JRNL TITL 2 COMPARISON OF ITS FREE AND BOUND STATES. JRNL REF J.MOL.BIOL. V. 293 531 1999 JRNL REFN ISSN 0022-2836 JRNL PMID 10543948 JRNL DOI 10.1006/JMBI.1999.3134 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.WIESMANN,G.FUH,H.W.CHRISTINGER,C.EIGENBROT,J.A.WELLS, REMARK 1 AUTH 2 A.M.DE VOS REMARK 1 TITL CRYSTAL STRUCTURE AT 1.7 A RESOLUTION OF VEGF IN COMPLEX REMARK 1 TITL 2 WITH DOMAIN 2 OF THE FLT-1 RECEPTOR REMARK 1 REF CELL(CAMBRIDGE,MASS.) V. 91 695 1997 REMARK 1 REFN ISSN 0092-8674 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.200 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.6 REMARK 3 NUMBER OF REFLECTIONS : 23438 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.284 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.500 REMARK 3 FREE R VALUE TEST SET COUNT : 1127 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.82 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2436 REMARK 3 BIN R VALUE (WORKING SET) : 0.3830 REMARK 3 BIN FREE R VALUE : 0.4000 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.50 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 136 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6121 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.10000 REMARK 3 B22 (A**2) : -7.60000 REMARK 3 B33 (A**2) : 8.90000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.30000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.900 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.500 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.400 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.500 ; 2.500 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1QTY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUN-99. REMARK 100 THE DEPOSITION ID IS D_1000009263. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-DEC-96 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24098 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.31100 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT IN REMARK 200 COMBINATION WITH MULTI-CRYSTAL AVERAGING REMARK 200 SOFTWARE USED: AMORE, DM REMARK 200 STARTING MODEL: 1VPF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, AMMONIUMSULFATE, TRIS , PH REMARK 280 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 62.15500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.50500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 62.15500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.50500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CHAINS V, W, X, AND Y FORM A BIOLOGICALLY ACTIVE COMPLEX. REMARK 300 CHAINS R, S, T, AND U FORM A BIOLOGICALLY ACTIVE COMPLEX. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: V, W, X, Y REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: R, S, T, U REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -121.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: R, S, T, U REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: V, W, X, Y REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 5.14492 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 33.50500 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 106.54650 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY V 8 REMARK 465 GLN V 9 REMARK 465 ASN V 10 REMARK 465 HIS V 11 REMARK 465 HIS V 12 REMARK 465 LYS V 108 REMARK 465 ASP V 109 REMARK 465 GLY W 8 REMARK 465 GLN W 9 REMARK 465 ASN W 10 REMARK 465 HIS W 11 REMARK 465 HIS W 12 REMARK 465 LYS W 108 REMARK 465 ASP W 109 REMARK 465 GLY R 8 REMARK 465 GLN R 9 REMARK 465 ASN R 10 REMARK 465 HIS R 11 REMARK 465 HIS R 12 REMARK 465 LYS R 108 REMARK 465 ASP R 109 REMARK 465 GLY S 8 REMARK 465 GLN S 9 REMARK 465 ASN S 10 REMARK 465 HIS S 11 REMARK 465 HIS S 12 REMARK 465 ASP S 109 REMARK 465 SER X 129 REMARK 465 ASP X 130 REMARK 465 THR X 131 REMARK 465 THR X 226 REMARK 465 ASN X 227 REMARK 465 THR X 228 REMARK 465 ILE X 229 REMARK 465 SER Y 129 REMARK 465 ASP Y 130 REMARK 465 THR Y 131 REMARK 465 THR Y 226 REMARK 465 ASN Y 227 REMARK 465 THR Y 228 REMARK 465 ILE Y 229 REMARK 465 SER T 129 REMARK 465 ASP T 130 REMARK 465 THR T 131 REMARK 465 THR T 226 REMARK 465 ASN T 227 REMARK 465 THR T 228 REMARK 465 ILE T 229 REMARK 465 SER U 129 REMARK 465 ASP U 130 REMARK 465 THR U 131 REMARK 465 THR U 226 REMARK 465 ASN U 227 REMARK 465 THR U 228 REMARK 465 ILE U 229 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG V 82 NE - CZ - NH2 ANGL. DEV. = 4.3 DEGREES REMARK 500 PRO X 157 C - N - CA ANGL. DEV. = 12.1 DEGREES REMARK 500 PRO Y 157 C - N - CA ANGL. DEV. = 14.8 DEGREES REMARK 500 PRO Y 157 C - N - CD ANGL. DEV. = -13.8 DEGREES REMARK 500 PRO T 157 C - N - CA ANGL. DEV. = 13.2 DEGREES REMARK 500 PRO U 157 C - N - CA ANGL. DEV. = 11.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS V 26 114.23 -33.08 REMARK 500 PRO V 40 24.74 -77.98 REMARK 500 HIS V 86 -23.80 71.48 REMARK 500 GLN V 87 76.89 -114.06 REMARK 500 CYS W 26 122.70 -28.80 REMARK 500 GLN W 37 -38.29 -39.93 REMARK 500 PRO W 40 22.51 -69.87 REMARK 500 GLU W 64 -18.35 -44.89 REMARK 500 SER W 74 166.01 179.28 REMARK 500 PRO W 85 145.14 -33.05 REMARK 500 HIS W 86 54.94 39.00 REMARK 500 GLN W 87 171.14 176.08 REMARK 500 CYS R 26 117.09 -31.70 REMARK 500 TYR R 39 60.02 -150.79 REMARK 500 PRO R 40 24.60 -66.67 REMARK 500 GLU R 64 -23.90 -38.89 REMARK 500 PRO R 85 115.07 -33.83 REMARK 500 GLN R 87 77.65 -174.50 REMARK 500 CYS S 26 117.22 -30.74 REMARK 500 TYR S 39 71.56 -101.97 REMARK 500 PRO S 40 26.87 -78.45 REMARK 500 HIS S 86 -12.08 69.04 REMARK 500 GLN S 89 111.42 -161.72 REMARK 500 LYS S 107 -173.40 -62.42 REMARK 500 PRO X 157 21.27 -61.16 REMARK 500 LYS X 182 -91.44 -110.31 REMARK 500 ASP X 187 89.12 -162.26 REMARK 500 SER X 188 -20.33 -36.86 REMARK 500 LYS X 190 -70.06 -108.79 REMARK 500 LYS X 200 18.61 -63.55 REMARK 500 ASN X 212 57.10 70.55 REMARK 500 GLU Y 141 -65.98 -90.68 REMARK 500 PRO Y 157 13.99 -51.92 REMARK 500 LYS Y 182 -86.57 -113.69 REMARK 500 SER Y 188 -14.54 -44.77 REMARK 500 LYS Y 190 -69.56 -108.19 REMARK 500 ASN Y 196 61.70 64.52 REMARK 500 LYS Y 200 7.39 -58.46 REMARK 500 GLU T 141 -60.59 -93.16 REMARK 500 PRO T 157 18.04 -60.60 REMARK 500 LYS T 182 -89.10 -110.87 REMARK 500 ASP T 187 96.10 -160.50 REMARK 500 LYS T 200 12.45 -63.10 REMARK 500 VAL U 136 -73.90 -44.71 REMARK 500 MET U 138 175.40 -37.94 REMARK 500 PRO U 157 20.24 -54.81 REMARK 500 LYS U 182 -88.26 -112.68 REMARK 500 SER U 188 -11.93 -42.26 REMARK 500 LYS U 190 -64.60 -107.10 REMARK 500 LYS U 200 12.59 -66.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FLT RELATED DB: PDB REMARK 900 VEGF IN COMPLEX WITH DOMAIN 2 OF THE FLT-1 RECEPTOR REMARK 900 RELATED ID: 1QSV RELATED DB: PDB REMARK 900 VEGF BINDING DOMAIN OF FLT-1 REMARK 900 RELATED ID: 1QSZ RELATED DB: PDB REMARK 900 VEGF BINDING DOMAIN OF FLT-1 DBREF 1QTY V 8 109 UNP P15692 VEGFA_HUMAN 34 135 DBREF 1QTY W 8 109 UNP P15692 VEGFA_HUMAN 34 135 DBREF 1QTY R 8 109 UNP P15692 VEGFA_HUMAN 34 135 DBREF 1QTY S 8 109 UNP P15692 VEGFA_HUMAN 34 135 DBREF 1QTY X 129 229 UNP P17948 VGFR1_HUMAN 129 229 DBREF 1QTY Y 129 229 UNP P17948 VGFR1_HUMAN 129 229 DBREF 1QTY T 129 229 UNP P17948 VGFR1_HUMAN 129 229 DBREF 1QTY U 129 229 UNP P17948 VGFR1_HUMAN 129 229 SEQRES 1 V 102 GLY GLN ASN HIS HIS GLU VAL VAL LYS PHE MET ASP VAL SEQRES 2 V 102 TYR GLN ARG SER TYR CYS HIS PRO ILE GLU THR LEU VAL SEQRES 3 V 102 ASP ILE PHE GLN GLU TYR PRO ASP GLU ILE GLU TYR ILE SEQRES 4 V 102 PHE LYS PRO SER CYS VAL PRO LEU MET ARG CYS GLY GLY SEQRES 5 V 102 CYS CYS ASN ASP GLU GLY LEU GLU CYS VAL PRO THR GLU SEQRES 6 V 102 GLU SER ASN ILE THR MET GLN ILE MET ARG ILE LYS PRO SEQRES 7 V 102 HIS GLN GLY GLN HIS ILE GLY GLU MET SER PHE LEU GLN SEQRES 8 V 102 HIS ASN LYS CYS GLU CYS ARG PRO LYS LYS ASP SEQRES 1 W 102 GLY GLN ASN HIS HIS GLU VAL VAL LYS PHE MET ASP VAL SEQRES 2 W 102 TYR GLN ARG SER TYR CYS HIS PRO ILE GLU THR LEU VAL SEQRES 3 W 102 ASP ILE PHE GLN GLU TYR PRO ASP GLU ILE GLU TYR ILE SEQRES 4 W 102 PHE LYS PRO SER CYS VAL PRO LEU MET ARG CYS GLY GLY SEQRES 5 W 102 CYS CYS ASN ASP GLU GLY LEU GLU CYS VAL PRO THR GLU SEQRES 6 W 102 GLU SER ASN ILE THR MET GLN ILE MET ARG ILE LYS PRO SEQRES 7 W 102 HIS GLN GLY GLN HIS ILE GLY GLU MET SER PHE LEU GLN SEQRES 8 W 102 HIS ASN LYS CYS GLU CYS ARG PRO LYS LYS ASP SEQRES 1 R 102 GLY GLN ASN HIS HIS GLU VAL VAL LYS PHE MET ASP VAL SEQRES 2 R 102 TYR GLN ARG SER TYR CYS HIS PRO ILE GLU THR LEU VAL SEQRES 3 R 102 ASP ILE PHE GLN GLU TYR PRO ASP GLU ILE GLU TYR ILE SEQRES 4 R 102 PHE LYS PRO SER CYS VAL PRO LEU MET ARG CYS GLY GLY SEQRES 5 R 102 CYS CYS ASN ASP GLU GLY LEU GLU CYS VAL PRO THR GLU SEQRES 6 R 102 GLU SER ASN ILE THR MET GLN ILE MET ARG ILE LYS PRO SEQRES 7 R 102 HIS GLN GLY GLN HIS ILE GLY GLU MET SER PHE LEU GLN SEQRES 8 R 102 HIS ASN LYS CYS GLU CYS ARG PRO LYS LYS ASP SEQRES 1 S 102 GLY GLN ASN HIS HIS GLU VAL VAL LYS PHE MET ASP VAL SEQRES 2 S 102 TYR GLN ARG SER TYR CYS HIS PRO ILE GLU THR LEU VAL SEQRES 3 S 102 ASP ILE PHE GLN GLU TYR PRO ASP GLU ILE GLU TYR ILE SEQRES 4 S 102 PHE LYS PRO SER CYS VAL PRO LEU MET ARG CYS GLY GLY SEQRES 5 S 102 CYS CYS ASN ASP GLU GLY LEU GLU CYS VAL PRO THR GLU SEQRES 6 S 102 GLU SER ASN ILE THR MET GLN ILE MET ARG ILE LYS PRO SEQRES 7 S 102 HIS GLN GLY GLN HIS ILE GLY GLU MET SER PHE LEU GLN SEQRES 8 S 102 HIS ASN LYS CYS GLU CYS ARG PRO LYS LYS ASP SEQRES 1 X 101 SER ASP THR GLY ARG PRO PHE VAL GLU MET TYR SER GLU SEQRES 2 X 101 ILE PRO GLU ILE ILE HIS MET THR GLU GLY ARG GLU LEU SEQRES 3 X 101 VAL ILE PRO CYS ARG VAL THR SER PRO ASN ILE THR VAL SEQRES 4 X 101 THR LEU LYS LYS PHE PRO LEU ASP THR LEU ILE PRO ASP SEQRES 5 X 101 GLY LYS ARG ILE ILE TRP ASP SER ARG LYS GLY PHE ILE SEQRES 6 X 101 ILE SER ASN ALA THR TYR LYS GLU ILE GLY LEU LEU THR SEQRES 7 X 101 CYS GLU ALA THR VAL ASN GLY HIS LEU TYR LYS THR ASN SEQRES 8 X 101 TYR LEU THR HIS ARG GLN THR ASN THR ILE SEQRES 1 Y 101 SER ASP THR GLY ARG PRO PHE VAL GLU MET TYR SER GLU SEQRES 2 Y 101 ILE PRO GLU ILE ILE HIS MET THR GLU GLY ARG GLU LEU SEQRES 3 Y 101 VAL ILE PRO CYS ARG VAL THR SER PRO ASN ILE THR VAL SEQRES 4 Y 101 THR LEU LYS LYS PHE PRO LEU ASP THR LEU ILE PRO ASP SEQRES 5 Y 101 GLY LYS ARG ILE ILE TRP ASP SER ARG LYS GLY PHE ILE SEQRES 6 Y 101 ILE SER ASN ALA THR TYR LYS GLU ILE GLY LEU LEU THR SEQRES 7 Y 101 CYS GLU ALA THR VAL ASN GLY HIS LEU TYR LYS THR ASN SEQRES 8 Y 101 TYR LEU THR HIS ARG GLN THR ASN THR ILE SEQRES 1 T 101 SER ASP THR GLY ARG PRO PHE VAL GLU MET TYR SER GLU SEQRES 2 T 101 ILE PRO GLU ILE ILE HIS MET THR GLU GLY ARG GLU LEU SEQRES 3 T 101 VAL ILE PRO CYS ARG VAL THR SER PRO ASN ILE THR VAL SEQRES 4 T 101 THR LEU LYS LYS PHE PRO LEU ASP THR LEU ILE PRO ASP SEQRES 5 T 101 GLY LYS ARG ILE ILE TRP ASP SER ARG LYS GLY PHE ILE SEQRES 6 T 101 ILE SER ASN ALA THR TYR LYS GLU ILE GLY LEU LEU THR SEQRES 7 T 101 CYS GLU ALA THR VAL ASN GLY HIS LEU TYR LYS THR ASN SEQRES 8 T 101 TYR LEU THR HIS ARG GLN THR ASN THR ILE SEQRES 1 U 101 SER ASP THR GLY ARG PRO PHE VAL GLU MET TYR SER GLU SEQRES 2 U 101 ILE PRO GLU ILE ILE HIS MET THR GLU GLY ARG GLU LEU SEQRES 3 U 101 VAL ILE PRO CYS ARG VAL THR SER PRO ASN ILE THR VAL SEQRES 4 U 101 THR LEU LYS LYS PHE PRO LEU ASP THR LEU ILE PRO ASP SEQRES 5 U 101 GLY LYS ARG ILE ILE TRP ASP SER ARG LYS GLY PHE ILE SEQRES 6 U 101 ILE SER ASN ALA THR TYR LYS GLU ILE GLY LEU LEU THR SEQRES 7 U 101 CYS GLU ALA THR VAL ASN GLY HIS LEU TYR LYS THR ASN SEQRES 8 U 101 TYR LEU THR HIS ARG GLN THR ASN THR ILE HELIX 1 1 LYS V 16 TYR V 25 1 10 HELIX 2 2 ILE V 35 TYR V 39 1 5 HELIX 3 3 LYS W 16 TYR W 25 1 10 HELIX 4 4 ILE W 35 TYR W 39 1 5 HELIX 5 5 LYS R 16 TYR R 25 1 10 HELIX 6 6 ILE R 35 TYR R 39 1 5 HELIX 7 7 LYS S 16 TYR S 25 1 10 HELIX 8 8 ILE S 35 TYR S 39 1 5 HELIX 9 9 THR X 198 ILE X 202 5 5 HELIX 10 10 THR Y 198 ILE Y 202 5 5 HELIX 11 11 THR T 198 ILE T 202 5 5 HELIX 12 12 THR U 198 ILE U 202 5 5 SHEET 1 A 3 GLN W 89 PRO W 106 0 SHEET 2 A 3 LEU W 66 ILE W 83 -1 N GLU W 67 O ARG W 105 SHEET 3 A 3 VAL V 14 VAL V 15 1 O VAL V 15 N GLN W 79 SHEET 1 A1 3 GLN W 89 PRO W 106 0 SHEET 2 A1 3 LEU W 66 ILE W 83 -1 N GLU W 67 O ARG W 105 SHEET 3 A1 3 ILE W 46 LYS W 48 -1 O ILE W 46 N ILE W 83 SHEET 1 B 2 HIS V 27 ASP V 34 0 SHEET 2 B 2 CYS V 51 GLY V 58 -1 N VAL V 52 O VAL V 33 SHEET 1 C 3 ILE V 46 LYS V 48 0 SHEET 2 C 3 LEU V 66 ILE V 83 -1 N MET V 81 O LYS V 48 SHEET 3 C 3 GLN V 89 PRO V 106 -1 O HIS V 90 N ARG V 82 SHEET 1 D 2 HIS W 27 ASP W 34 0 SHEET 2 D 2 CYS W 51 GLY W 58 -1 N VAL W 52 O VAL W 33 SHEET 1 E 2 HIS R 27 ASP R 34 0 SHEET 2 E 2 CYS R 51 GLY R 58 -1 N VAL R 52 O VAL R 33 SHEET 1 F 3 ILE R 46 LYS R 48 0 SHEET 2 F 3 LEU R 66 LYS R 84 -1 N MET R 81 O LYS R 48 SHEET 3 F 3 GLN R 87 PRO R 106 -1 N GLN R 87 O LYS R 84 SHEET 1 G 2 HIS S 27 ASP S 34 0 SHEET 2 G 2 CYS S 51 GLY S 58 -1 N VAL S 52 O VAL S 33 SHEET 1 H 3 ILE S 46 LYS S 48 0 SHEET 2 H 3 LEU S 66 LYS S 84 -1 N MET S 81 O LYS S 48 SHEET 3 H 3 GLN S 87 PRO S 106 -1 N GLN S 87 O LYS S 84 SHEET 1 I 5 GLU X 144 MET X 148 0 SHEET 2 I 5 LEU X 215 ARG X 224 1 O ASN X 219 N GLU X 144 SHEET 3 I 5 LEU X 204 THR X 210 -1 O LEU X 205 N TYR X 220 SHEET 4 I 5 THR X 168 LYS X 171 -1 N THR X 168 O GLU X 208 SHEET 5 I 5 ASP X 175 LEU X 177 -1 N ASP X 175 O LYS X 171 SHEET 1 J 3 LEU X 154 ILE X 156 0 SHEET 2 J 3 GLY X 191 ILE X 194 -1 N PHE X 192 O ILE X 156 SHEET 3 J 3 ILE X 184 ASP X 187 -1 O ILE X 185 N ILE X 193 SHEET 1 K 5 GLU Y 144 MET Y 148 0 SHEET 2 K 5 HIS Y 214 ARG Y 224 1 O ASN Y 219 N GLU Y 144 SHEET 3 K 5 LEU Y 204 VAL Y 211 -1 O LEU Y 205 N TYR Y 220 SHEET 4 K 5 THR Y 168 LYS Y 171 -1 N THR Y 168 O GLU Y 208 SHEET 5 K 5 ASP Y 175 LEU Y 177 -1 O ASP Y 175 N LYS Y 171 SHEET 1 L 3 LEU Y 154 ILE Y 156 0 SHEET 2 L 3 GLY Y 191 ILE Y 194 -1 N PHE Y 192 O ILE Y 156 SHEET 3 L 3 ILE Y 184 ASP Y 187 -1 O ILE Y 185 N ILE Y 193 SHEET 1 M 5 GLU T 144 MET T 148 0 SHEET 2 M 5 HIS T 214 ARG T 224 1 O ASN T 219 N GLU T 144 SHEET 3 M 5 LEU T 204 VAL T 211 -1 O LEU T 205 N TYR T 220 SHEET 4 M 5 THR T 168 LYS T 171 -1 N THR T 168 O GLU T 208 SHEET 5 M 5 ASP T 175 LEU T 177 -1 N ASP T 175 O LYS T 171 SHEET 1 N 3 LEU T 154 ILE T 156 0 SHEET 2 N 3 GLY T 191 ILE T 194 -1 O PHE T 192 N ILE T 156 SHEET 3 N 3 ILE T 184 ASP T 187 -1 O ILE T 185 N ILE T 193 SHEET 1 O 5 GLU U 144 MET U 148 0 SHEET 2 O 5 HIS U 214 ARG U 224 1 O ASN U 219 N GLU U 144 SHEET 3 O 5 LEU U 204 VAL U 211 -1 O LEU U 205 N TYR U 220 SHEET 4 O 5 THR U 168 LYS U 171 -1 N THR U 168 O GLU U 208 SHEET 5 O 5 ASP U 175 LEU U 177 -1 O ASP U 175 N LYS U 171 SHEET 1 P 3 LEU U 154 ILE U 156 0 SHEET 2 P 3 GLY U 191 ILE U 194 -1 O PHE U 192 N ILE U 156 SHEET 3 P 3 ILE U 184 ASP U 187 -1 O ILE U 185 N ILE U 193 SSBOND 1 CYS V 26 CYS V 68 1555 1555 2.03 SSBOND 2 CYS V 51 CYS W 60 1555 1555 2.04 SSBOND 3 CYS V 57 CYS V 102 1555 1555 2.02 SSBOND 4 CYS V 60 CYS W 51 1555 1555 2.05 SSBOND 5 CYS V 61 CYS V 104 1555 1555 2.03 SSBOND 6 CYS W 26 CYS W 68 1555 1555 2.03 SSBOND 7 CYS W 57 CYS W 102 1555 1555 2.02 SSBOND 8 CYS W 61 CYS W 104 1555 1555 2.03 SSBOND 9 CYS R 26 CYS R 68 1555 1555 2.03 SSBOND 10 CYS R 51 CYS S 60 1555 1555 2.04 SSBOND 11 CYS R 57 CYS R 102 1555 1555 2.03 SSBOND 12 CYS R 60 CYS S 51 1555 1555 2.04 SSBOND 13 CYS R 61 CYS R 104 1555 1555 2.01 SSBOND 14 CYS S 26 CYS S 68 1555 1555 2.02 SSBOND 15 CYS S 57 CYS S 102 1555 1555 2.02 SSBOND 16 CYS S 61 CYS S 104 1555 1555 2.03 SSBOND 17 CYS X 158 CYS X 207 1555 1555 2.03 SSBOND 18 CYS Y 158 CYS Y 207 1555 1555 2.03 SSBOND 19 CYS T 158 CYS T 207 1555 1555 2.02 SSBOND 20 CYS U 158 CYS U 207 1555 1555 2.03 CISPEP 1 LYS V 48 PRO V 49 0 -0.23 CISPEP 2 LYS W 48 PRO W 49 0 -0.56 CISPEP 3 LYS R 48 PRO R 49 0 -0.18 CISPEP 4 LYS S 48 PRO S 49 0 -0.02 CISPEP 5 PHE X 172 PRO X 173 0 0.07 CISPEP 6 PHE Y 172 PRO Y 173 0 0.10 CISPEP 7 PHE T 172 PRO T 173 0 0.53 CISPEP 8 PHE U 172 PRO U 173 0 0.90 CRYST1 124.310 67.010 120.840 90.00 118.15 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008044 0.000000 0.004304 0.00000 SCALE2 0.000000 0.014923 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009386 0.00000