PDB Short entry for 1QU0 HEADER METAL BINDING PROTEIN 05-JUL-99 1QU0 TITLE CRYSTAL STRUCTURE OF THE FIFTH LAMININ G-LIKE MODULE OF THE TITLE 2 MOUSE LAMININ ALPHA2 CHAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: LAMININ ALPHA2 CHAIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: LG5 MODULE; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM_COMMON: 293-EBNA HUMAN AMBRYONIC KIDNEY SOURCE 6 CELLS KEYWDS BETA SANDWICH, CALCIUM-BINDING PROTEIN, METAL BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.HOHENESTER,D.TISI,J.F.TALTS,R.TIMPL REVDAT 4 24-FEB-09 1QU0 1 VERSN REVDAT 3 01-MAR-05 1QU0 3 HETATM DBREF REVDAT 2 01-APR-03 1QU0 1 JRNL REVDAT 1 03-DEC-99 1QU0 0 JRNL AUTH E.HOHENESTER,D.TISI,J.F.TALTS,R.TIMPL JRNL TITL THE CRYSTAL STRUCTURE OF A LAMININ G-LIKE MODULE JRNL TITL 2 REVEALS THE MOLECULAR BASIS OF ALPHA-DYSTROGLYCAN JRNL TITL 3 BINDING TO LAMININS, PERLECAN, AND AGRIN. JRNL REF MOL.CELL V. 4 783 1999 JRNL REFN ISSN 1097-2765 JRNL PMID 10619025 JRNL DOI 10.1016/S1097-2765(00)80388-3 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.F.TALTS,K.MANN,Y.YAMADA,R.TIMPL REMARK 1 TITL STRUCTURAL ANALYSIS AND PROTEOLYTIC PROCESSING OF REMARK 1 TITL 2 RECOMBINANT G DOMAIN OF MOUSE LAMININ ALPHA2 CHAIN REMARK 1 REF FEBS LETT. V. 426 71 1998 REMARK 1 REFN ISSN 0014-5793 REMARK 1 DOI 10.1016/S0014-5793(98)00312-3 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.AUMAILLEY,N.SMYTH REMARK 1 TITL THE ROLE OF LAMININS IN BASEMENT MEMBRANE ASSEMBLY REMARK 1 REF J.ANAT. V. 193 1 1998 REMARK 1 REFN ISSN 0021-8782 REMARK 1 DOI 10.1046/J.1469-7580.1998.19310001.X REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 43258 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : 15 THIN RESOLUTION SHELLS REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2175 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5480 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 39 REMARK 3 SOLVENT ATOMS : 275 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.40 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT CORRECTION APPLIED REMARK 4 REMARK 4 1QU0 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JUL-99. REMARK 100 THE RCSB ID CODE IS RCSB009291. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX7.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.488 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43258 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 200 DATA REDUNDANCY : 2.100 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.11000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M AMMONIUM SULFATE, 2% REMARK 280 ISOPROPANOL, 100 MM HEPES, 10 MM CALCIUM CHLORIDE, PH 7.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 56.44500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ASYMMETRIC UNIT CONTAINS FOUR COPIES OF THE LAMININ REMARK 300 ALPHA2 LG5 MODULE, WHICH IS MONOMERIC IN SOLUTION REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 2928 REMARK 465 PRO A 2929 REMARK 465 LEU A 2930 REMARK 465 ALA A 2931 REMARK 465 ALA A 2932 REMARK 465 ASN A 2933 REMARK 465 ALA A 2934 REMARK 465 GLU A 2935 REMARK 465 THR A 3117 REMARK 465 THR A 3118 REMARK 465 ALA B 2928 REMARK 465 PRO B 2929 REMARK 465 LEU B 2930 REMARK 465 ALA B 2931 REMARK 465 ALA B 2932 REMARK 465 ASN B 2933 REMARK 465 ALA B 2934 REMARK 465 GLU B 2935 REMARK 465 THR B 3117 REMARK 465 THR B 3118 REMARK 465 ALA C 2928 REMARK 465 PRO C 2929 REMARK 465 LEU C 2930 REMARK 465 ALA C 2931 REMARK 465 ALA C 2932 REMARK 465 ASN C 2933 REMARK 465 ALA C 2934 REMARK 465 THR C 3118 REMARK 465 ALA D 2928 REMARK 465 PRO D 2929 REMARK 465 LEU D 2930 REMARK 465 ALA D 2931 REMARK 465 ALA D 2932 REMARK 465 ASN D 2933 REMARK 465 ALA D 2934 REMARK 465 GLU D 2935 REMARK 465 THR D 3117 REMARK 465 THR D 3118 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER A 2936 CB OG REMARK 480 LYS A 2980 CG CD CE NZ REMARK 480 ARG A 3032 NE CZ NH1 REMARK 480 LYS B 2980 CG CD CE NZ REMARK 480 GLU B 3011 CG CD OE1 OE2 REMARK 480 LYS C 2980 CG CD CE NZ REMARK 480 GLU C 3011 CG CD OE1 OE2 REMARK 480 ARG C 3032 CG CD NE CZ NH1 REMARK 480 LYS D 2980 CG CD CE NZ REMARK 480 ARG D 3032 CG CD NE CZ NH1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A2948 -72.04 -61.68 REMARK 500 LYS A2980 -64.57 -102.60 REMARK 500 ASP A2982 140.72 84.48 REMARK 500 GLU A2991 -6.09 74.85 REMARK 500 LYS A3030 -97.44 63.64 REMARK 500 ASN A3057 55.69 -170.32 REMARK 500 PHE A3072 2.34 -66.56 REMARK 500 ALA B2948 -73.95 -62.62 REMARK 500 PHE B2962 170.46 179.59 REMARK 500 LYS B2980 -63.25 -101.86 REMARK 500 ASP B2982 139.29 83.68 REMARK 500 GLU B2991 -5.40 74.00 REMARK 500 LYS B3030 -96.31 61.63 REMARK 500 ASN B3057 50.97 -174.82 REMARK 500 ALA C2948 -70.54 -60.22 REMARK 500 LYS C2980 -62.29 -102.44 REMARK 500 ASP C2982 144.82 82.89 REMARK 500 GLU C2991 -3.57 73.24 REMARK 500 LYS C3030 -100.55 63.69 REMARK 500 ASN C3057 54.60 -172.00 REMARK 500 ALA D2948 -72.66 -61.20 REMARK 500 PHE D2962 170.80 178.88 REMARK 500 LYS D2980 -62.56 -101.82 REMARK 500 ASP D2982 137.22 83.63 REMARK 500 GLU D2991 -4.50 72.42 REMARK 500 CYS D3017 41.51 -109.27 REMARK 500 LYS D3030 -100.35 60.61 REMARK 500 ASN D3057 55.54 -171.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 701 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A2982 OD2 REMARK 620 2 ASN A2999 O 74.7 REMARK 620 3 SER A3053 O 72.6 76.0 REMARK 620 4 ASP A3055 OD2 93.8 165.9 92.9 REMARK 620 5 SO4 A 801 O2 148.7 97.1 76.1 88.5 REMARK 620 6 HOH A 975 O 63.8 76.7 133.1 105.9 144.8 REMARK 620 7 SO4 A 801 O4 160.5 92.7 119.4 100.5 45.9 99.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 702 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B2982 OD2 REMARK 620 2 ASN B2999 O 86.7 REMARK 620 3 SER B3053 O 78.9 82.0 REMARK 620 4 ASP B3055 OD2 90.5 166.4 84.4 REMARK 620 5 SO4 B 803 O2 173.0 86.3 100.4 96.4 REMARK 620 6 HOH B1035 O 76.3 92.3 154.8 100.0 103.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 703 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C2982 OD2 REMARK 620 2 ASN C2999 O 80.8 REMARK 620 3 SER C3053 O 71.7 79.1 REMARK 620 4 ASP C3055 OD2 90.8 165.1 86.6 REMARK 620 5 HOH C1164 O 127.6 118.5 153.7 76.3 REMARK 620 6 SO4 C 804 O2 151.0 87.0 80.3 94.7 81.3 REMARK 620 7 HOH C1133 O 77.4 89.1 148.2 101.2 56.6 128.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 704 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D2982 OD2 REMARK 620 2 ASN D2999 O 81.8 REMARK 620 3 SER D3053 O 73.5 77.0 REMARK 620 4 ASP D3055 OD2 88.1 163.9 88.1 REMARK 620 5 SO4 D 806 O2 149.8 93.6 76.4 88.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 701 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 801 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 802 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 702 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 803 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 703 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 804 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 805 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA D 704 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 806 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 807 DBREF 1QU0 A 2932 3106 UNP Q60675 LAMA2_MOUSE 2932 3106 DBREF 1QU0 B 2932 3106 UNP Q60675 LAMA2_MOUSE 2932 3106 DBREF 1QU0 C 2932 3106 UNP Q60675 LAMA2_MOUSE 2932 3106 DBREF 1QU0 D 2932 3106 UNP Q60675 LAMA2_MOUSE 2932 3106 SEQRES 1 A 191 ALA PRO LEU ALA ALA ASN ALA GLU SER GLY THR TYR PHE SEQRES 2 A 191 ASP GLY THR GLY PHE ALA LYS ALA VAL GLY GLY PHE LYS SEQRES 3 A 191 VAL GLY LEU ASP LEU LEU VAL GLU PHE GLU PHE ARG THR SEQRES 4 A 191 THR ARG PRO THR GLY VAL LEU LEU GLY ILE SER SER GLN SEQRES 5 A 191 LYS MET ASP GLY MET GLY ILE GLU MET ILE ASP GLU LYS SEQRES 6 A 191 LEU MET PHE HIS VAL ASP ASN GLY ALA GLY ARG PHE THR SEQRES 7 A 191 ALA ILE TYR ASP ALA GLU ILE PRO GLY HIS MET CYS ASN SEQRES 8 A 191 GLY GLN TRP HIS LYS VAL THR ALA LYS LYS ILE LYS ASN SEQRES 9 A 191 ARG LEU GLU LEU VAL VAL ASP GLY ASN GLN VAL ASP ALA SEQRES 10 A 191 GLN SER PRO ASN SER ALA SER THR SER ALA ASP THR ASN SEQRES 11 A 191 ASP PRO VAL PHE VAL GLY GLY PHE PRO GLY GLY LEU ASN SEQRES 12 A 191 GLN PHE GLY LEU THR THR ASN ILE ARG PHE ARG GLY CYS SEQRES 13 A 191 ILE ARG SER LEU LYS LEU THR LYS GLY THR GLY LYS PRO SEQRES 14 A 191 LEU GLU VAL ASN PHE ALA LYS ALA LEU GLU LEU ARG GLY SEQRES 15 A 191 VAL GLN PRO VAL SER CYS PRO THR THR SEQRES 1 B 191 ALA PRO LEU ALA ALA ASN ALA GLU SER GLY THR TYR PHE SEQRES 2 B 191 ASP GLY THR GLY PHE ALA LYS ALA VAL GLY GLY PHE LYS SEQRES 3 B 191 VAL GLY LEU ASP LEU LEU VAL GLU PHE GLU PHE ARG THR SEQRES 4 B 191 THR ARG PRO THR GLY VAL LEU LEU GLY ILE SER SER GLN SEQRES 5 B 191 LYS MET ASP GLY MET GLY ILE GLU MET ILE ASP GLU LYS SEQRES 6 B 191 LEU MET PHE HIS VAL ASP ASN GLY ALA GLY ARG PHE THR SEQRES 7 B 191 ALA ILE TYR ASP ALA GLU ILE PRO GLY HIS MET CYS ASN SEQRES 8 B 191 GLY GLN TRP HIS LYS VAL THR ALA LYS LYS ILE LYS ASN SEQRES 9 B 191 ARG LEU GLU LEU VAL VAL ASP GLY ASN GLN VAL ASP ALA SEQRES 10 B 191 GLN SER PRO ASN SER ALA SER THR SER ALA ASP THR ASN SEQRES 11 B 191 ASP PRO VAL PHE VAL GLY GLY PHE PRO GLY GLY LEU ASN SEQRES 12 B 191 GLN PHE GLY LEU THR THR ASN ILE ARG PHE ARG GLY CYS SEQRES 13 B 191 ILE ARG SER LEU LYS LEU THR LYS GLY THR GLY LYS PRO SEQRES 14 B 191 LEU GLU VAL ASN PHE ALA LYS ALA LEU GLU LEU ARG GLY SEQRES 15 B 191 VAL GLN PRO VAL SER CYS PRO THR THR SEQRES 1 C 191 ALA PRO LEU ALA ALA ASN ALA GLU SER GLY THR TYR PHE SEQRES 2 C 191 ASP GLY THR GLY PHE ALA LYS ALA VAL GLY GLY PHE LYS SEQRES 3 C 191 VAL GLY LEU ASP LEU LEU VAL GLU PHE GLU PHE ARG THR SEQRES 4 C 191 THR ARG PRO THR GLY VAL LEU LEU GLY ILE SER SER GLN SEQRES 5 C 191 LYS MET ASP GLY MET GLY ILE GLU MET ILE ASP GLU LYS SEQRES 6 C 191 LEU MET PHE HIS VAL ASP ASN GLY ALA GLY ARG PHE THR SEQRES 7 C 191 ALA ILE TYR ASP ALA GLU ILE PRO GLY HIS MET CYS ASN SEQRES 8 C 191 GLY GLN TRP HIS LYS VAL THR ALA LYS LYS ILE LYS ASN SEQRES 9 C 191 ARG LEU GLU LEU VAL VAL ASP GLY ASN GLN VAL ASP ALA SEQRES 10 C 191 GLN SER PRO ASN SER ALA SER THR SER ALA ASP THR ASN SEQRES 11 C 191 ASP PRO VAL PHE VAL GLY GLY PHE PRO GLY GLY LEU ASN SEQRES 12 C 191 GLN PHE GLY LEU THR THR ASN ILE ARG PHE ARG GLY CYS SEQRES 13 C 191 ILE ARG SER LEU LYS LEU THR LYS GLY THR GLY LYS PRO SEQRES 14 C 191 LEU GLU VAL ASN PHE ALA LYS ALA LEU GLU LEU ARG GLY SEQRES 15 C 191 VAL GLN PRO VAL SER CYS PRO THR THR SEQRES 1 D 191 ALA PRO LEU ALA ALA ASN ALA GLU SER GLY THR TYR PHE SEQRES 2 D 191 ASP GLY THR GLY PHE ALA LYS ALA VAL GLY GLY PHE LYS SEQRES 3 D 191 VAL GLY LEU ASP LEU LEU VAL GLU PHE GLU PHE ARG THR SEQRES 4 D 191 THR ARG PRO THR GLY VAL LEU LEU GLY ILE SER SER GLN SEQRES 5 D 191 LYS MET ASP GLY MET GLY ILE GLU MET ILE ASP GLU LYS SEQRES 6 D 191 LEU MET PHE HIS VAL ASP ASN GLY ALA GLY ARG PHE THR SEQRES 7 D 191 ALA ILE TYR ASP ALA GLU ILE PRO GLY HIS MET CYS ASN SEQRES 8 D 191 GLY GLN TRP HIS LYS VAL THR ALA LYS LYS ILE LYS ASN SEQRES 9 D 191 ARG LEU GLU LEU VAL VAL ASP GLY ASN GLN VAL ASP ALA SEQRES 10 D 191 GLN SER PRO ASN SER ALA SER THR SER ALA ASP THR ASN SEQRES 11 D 191 ASP PRO VAL PHE VAL GLY GLY PHE PRO GLY GLY LEU ASN SEQRES 12 D 191 GLN PHE GLY LEU THR THR ASN ILE ARG PHE ARG GLY CYS SEQRES 13 D 191 ILE ARG SER LEU LYS LEU THR LYS GLY THR GLY LYS PRO SEQRES 14 D 191 LEU GLU VAL ASN PHE ALA LYS ALA LEU GLU LEU ARG GLY SEQRES 15 D 191 VAL GLN PRO VAL SER CYS PRO THR THR HET CA A 701 1 HET SO4 A 801 5 HET SO4 A 802 5 HET CA B 702 1 HET SO4 B 803 5 HET CA C 703 1 HET SO4 C 804 5 HET SO4 C 805 5 HET CA D 704 1 HET SO4 D 806 5 HET SO4 D 807 5 HETNAM CA CALCIUM ION HETNAM SO4 SULFATE ION FORMUL 5 CA 4(CA 2+) FORMUL 6 SO4 7(O4 S 2-) FORMUL 16 HOH *275(H2 O) HELIX 1 1 GLY A 3014 ASN A 3018 5 5 HELIX 2 2 ASN A 3100 ALA A 3104 5 5 HELIX 3 3 GLY B 3014 ASN B 3018 5 5 HELIX 4 4 ASN B 3100 ALA B 3104 5 5 HELIX 5 5 GLY C 3014 ASN C 3018 5 5 HELIX 6 6 ASN C 3100 ALA C 3104 5 5 HELIX 7 7 GLY D 3014 ASN D 3018 5 5 HELIX 8 8 ASN D 3100 ALA D 3104 5 5 SHEET 1 A13 ARG A3003 TYR A3008 0 SHEET 2 A13 LYS A2992 ASP A2998 -1 O LEU A2993 N TYR A3008 SHEET 3 A13 GLY A2983 ILE A2989 -1 O GLY A2983 N ASP A2998 SHEET 4 A13 GLY A2971 SER A2977 -1 O GLY A2971 N MET A2988 SHEET 5 A13 PHE A3061 VAL A3062 -1 N PHE A3061 O GLY A2975 SHEET 6 A13 THR A2938 LYS A2947 -1 O ALA A2946 N VAL A3062 SHEET 7 A13 GLU A3106 GLN A3111 -1 O GLU A3106 N LYS A2947 SHEET 8 A13 THR A2938 LYS A2947 -1 O TYR A2939 N GLN A3111 SHEET 9 A13 ARG A3081 LYS A3091 -1 O GLY A3082 N PHE A2940 SHEET 10 A13 ASP A2957 THR A2966 -1 O LEU A2959 N THR A3090 SHEET 11 A13 HIS A3022 ILE A3029 -1 N HIS A3022 O PHE A2964 SHEET 12 A13 ARG A3032 VAL A3037 -1 O ARG A3032 N ILE A3029 SHEET 13 A13 ASN A3040 GLN A3045 -1 N ASN A3040 O VAL A3037 SHEET 1 B13 ASN B3040 GLN B3045 0 SHEET 2 B13 ARG B3032 VAL B3037 -1 N LEU B3033 O ALA B3044 SHEET 3 B13 HIS B3022 ILE B3029 -1 O THR B3025 N VAL B3036 SHEET 4 B13 ASP B2957 THR B2966 -1 O LEU B2958 N LYS B3028 SHEET 5 B13 ARG B3081 LYS B3091 -1 N CYS B3083 O ARG B2965 SHEET 6 B13 THR B2938 LYS B2947 -1 N THR B2938 O ILE B3084 SHEET 7 B13 GLU B3106 GLN B3111 -1 O GLU B3106 N LYS B2947 SHEET 8 B13 THR B2938 LYS B2947 -1 O TYR B2939 N GLN B3111 SHEET 9 B13 PHE B3061 VAL B3062 -1 N VAL B3062 O ALA B2946 SHEET 10 B13 GLY B2971 SER B2977 -1 O GLY B2975 N PHE B3061 SHEET 11 B13 GLY B2983 ILE B2989 -1 N MET B2984 O ILE B2976 SHEET 12 B13 LYS B2992 ASP B2998 -1 O LYS B2992 N ILE B2989 SHEET 13 B13 ARG B3003 TYR B3008 -1 N PHE B3004 O VAL B2997 SHEET 1 C15 ASN C3040 GLN C3045 0 SHEET 2 C15 ARG C3032 VAL C3037 -1 N LEU C3033 O ALA C3044 SHEET 3 C15 HIS C3022 ILE C3029 -1 O THR C3025 N VAL C3036 SHEET 4 C15 ASP C2957 ARG C2965 -1 O LEU C2958 N LYS C3028 SHEET 5 C15 ARG C3081 LYS C3091 -1 N CYS C3083 O ARG C2965 SHEET 6 C15 LEU C3097 GLU C3098 -1 N LEU C3097 O LEU C3089 SHEET 7 C15 ARG C3081 LYS C3091 -1 O LEU C3089 N LEU C3097 SHEET 8 C15 THR C2938 LYS C2947 -1 N THR C2938 O ILE C3084 SHEET 9 C15 GLU C3106 GLN C3111 -1 O GLU C3106 N LYS C2947 SHEET 10 C15 THR C2938 LYS C2947 -1 O TYR C2939 N GLN C3111 SHEET 11 C15 PHE C3061 VAL C3062 -1 N VAL C3062 O ALA C2946 SHEET 12 C15 GLY C2971 SER C2977 -1 O GLY C2975 N PHE C3061 SHEET 13 C15 GLY C2983 ILE C2989 -1 N MET C2984 O ILE C2976 SHEET 14 C15 LYS C2992 ASP C2998 -1 O LYS C2992 N ILE C2989 SHEET 15 C15 ARG C3003 TYR C3008 -1 N PHE C3004 O VAL C2997 SHEET 1 D15 ASN D3040 GLN D3045 0 SHEET 2 D15 ARG D3032 VAL D3037 -1 N LEU D3033 O ALA D3044 SHEET 3 D15 HIS D3022 ILE D3029 -1 O THR D3025 N VAL D3036 SHEET 4 D15 ASP D2957 THR D2966 -1 O LEU D2958 N LYS D3028 SHEET 5 D15 ARG D3081 LYS D3091 -1 N CYS D3083 O ARG D2965 SHEET 6 D15 LEU D3097 GLU D3098 -1 N LEU D3097 O LEU D3089 SHEET 7 D15 ARG D3081 LYS D3091 -1 O LEU D3089 N LEU D3097 SHEET 8 D15 THR D2938 LYS D2947 -1 O THR D2938 N ILE D3084 SHEET 9 D15 GLU D3106 GLN D3111 -1 O GLU D3106 N LYS D2947 SHEET 10 D15 THR D2938 LYS D2947 -1 O TYR D2939 N GLN D3111 SHEET 11 D15 PHE D3061 VAL D3062 -1 N VAL D3062 O ALA D2946 SHEET 12 D15 GLY D2971 SER D2977 -1 O GLY D2975 N PHE D3061 SHEET 13 D15 GLY D2983 ILE D2989 -1 N MET D2984 O ILE D2976 SHEET 14 D15 LYS D2992 ASP D2998 -1 O LYS D2992 N ILE D2989 SHEET 15 D15 ARG D3003 TYR D3008 -1 N PHE D3004 O VAL D2997 SSBOND 1 CYS A 3083 CYS A 3115 1555 1555 2.03 SSBOND 2 CYS B 3083 CYS B 3115 1555 1555 2.03 SSBOND 3 CYS C 3083 CYS C 3115 1555 1555 2.03 SSBOND 4 CYS D 3083 CYS D 3115 1555 1555 2.03 LINK OD2 ASP A2982 CA CA A 701 1555 1555 2.70 LINK O ASN A2999 CA CA A 701 1555 1555 2.79 LINK O SER A3053 CA CA A 701 1555 1555 2.40 LINK OD2 ASP A3055 CA CA A 701 1555 1555 2.88 LINK OD2 ASP B2982 CA CA B 702 1555 1555 2.45 LINK O ASN B2999 CA CA B 702 1555 1555 2.60 LINK O SER B3053 CA CA B 702 1555 1555 2.40 LINK OD2 ASP B3055 CA CA B 702 1555 1555 2.98 LINK OD2 ASP C2982 CA CA C 703 1555 1555 2.61 LINK O ASN C2999 CA CA C 703 1555 1555 2.78 LINK O SER C3053 CA CA C 703 1555 1555 2.49 LINK OD2 ASP C3055 CA CA C 703 1555 1555 2.79 LINK OD2 ASP D2982 CA CA D 704 1555 1555 2.71 LINK O ASN D2999 CA CA D 704 1555 1555 2.96 LINK O SER D3053 CA CA D 704 1555 1555 2.50 LINK OD2 ASP D3055 CA CA D 704 1555 1555 2.95 LINK CA CA A 701 O2 SO4 A 801 1555 1555 2.46 LINK CA CA A 701 O HOH A 975 1555 1555 2.61 LINK CA CA B 702 O2 SO4 B 803 1555 1555 2.22 LINK CA CA B 702 O HOH B1035 1555 1555 2.88 LINK CA CA C 703 O HOH C1164 1555 1555 2.45 LINK CA CA C 703 O2 SO4 C 804 1555 1555 2.43 LINK CA CA D 704 O2 SO4 D 806 1555 1555 2.48 LINK CA CA A 701 O4 SO4 A 801 1555 1555 3.36 LINK CA CA C 703 O HOH C1133 1555 1555 3.10 SITE 1 AC1 6 SO4 A 801 HOH A 975 ASP A2982 ASN A2999 SITE 2 AC1 6 SER A3053 ASP A3055 SITE 1 AC2 5 CA A 701 ALA A3050 SER A3051 THR A3052 SITE 2 AC2 5 SER A3053 SITE 1 AC3 4 PRO A3066 GLY A3067 ARG A3079 ARG A3108 SITE 1 AC4 6 SO4 B 803 HOH B1035 ASP B2982 ASN B2999 SITE 2 AC4 6 SER B3053 ASP B3055 SITE 1 AC5 6 CA B 702 ASN B2999 SER B3051 THR B3052 SITE 2 AC5 6 SER B3053 LYS C3027 SITE 1 AC6 7 SO4 C 804 HOH C1133 HOH C1164 ASP C2982 SITE 2 AC6 7 ASN C2999 SER C3053 ASP C3055 SITE 1 AC7 8 LYS B3027 CA C 703 HOH C1164 ASN C2999 SITE 2 AC7 8 ALA C3050 SER C3051 THR C3052 SER C3053 SITE 1 AC8 4 PRO C3066 GLY C3067 ARG C3079 ARG C3108 SITE 1 AC9 5 SO4 D 806 ASP D2982 ASN D2999 SER D3053 SITE 2 AC9 5 ASP D3055 SITE 1 BC1 5 CA D 704 ALA D3050 SER D3051 THR D3052 SITE 2 BC1 5 SER D3053 SITE 1 BC2 4 PRO D3066 GLY D3067 ARG D3079 ARG D3108 CRYST1 42.220 112.890 117.400 90.00 92.00 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023685 0.000000 0.000827 0.00000 SCALE2 0.000000 0.008858 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008523 0.00000