PDB Short entry for 1QZW HEADER SIGNALING PROTEIN/RNA 18-SEP-03 1QZW TITLE CRYSTAL STRUCTURE OF THE COMPLETE CORE OF ARCHAEAL SRP AND TITLE 2 IMPLICATIONS FOR INTER-DOMAIN COMMUNICATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: 7S RNA; COMPND 3 CHAIN: B, D, F, H; COMPND 4 FRAGMENT: SRP RNA HELIX 8; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: SIGNAL RECOGNITION 54 KDA PROTEIN; COMPND 8 CHAIN: A, C, E, G; COMPND 9 SYNONYM: SRP54; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; SOURCE 3 ORGANISM_TAXID: 2287; SOURCE 4 GENE: 7S RNA; SOURCE 5 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: PUC18; SOURCE 7 OTHER_DETAILS: IN VITRO TRANSLATION; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; SOURCE 10 ORGANISM_TAXID: 2287; SOURCE 11 GENE: SRP54; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 14 EXPRESSION_SYSTEM_STRAIN: ROSETTA PLYSS; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PET24D KEYWDS SIGNAL RECOGNITION PARTICLE, SRP, RIBONUCLEOPROTEIN COMPLEX, PROTEIN- KEYWDS 2 RNA COMPLEX, PROTEIN TARGETING, SIGNALING PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.R.ROSENDAL,K.WILD,G.MONTOYA,I.SINNING REVDAT 7 23-AUG-23 1QZW 1 SEQADV SHEET LINK REVDAT 6 22-DEC-10 1QZW 1 MTRIX1 MTRIX2 MTRIX3 REVDAT 5 12-MAY-09 1QZW 1 MTRIX1 MTRIX2 MTRIX3 REVDAT 4 24-FEB-09 1QZW 1 VERSN REVDAT 3 20-JAN-04 1QZW 1 HELIX SHEET REVDAT 2 16-DEC-03 1QZW 1 JRNL REVDAT 1 18-NOV-03 1QZW 0 JRNL AUTH K.R.ROSENDAL,K.WILD,G.MONTOYA,I.SINNING JRNL TITL CRYSTAL STRUCTURE OF THE COMPLETE CORE OF ARCHAEAL SIGNAL JRNL TITL 2 RECOGNITION PARTICLE AND IMPLICATIONS FOR INTERDOMAIN JRNL TITL 3 COMMUNICATION JRNL REF PROC.NATL.ACAD.SCI.USA V. 100 14701 2003 JRNL REFN ISSN 0027-8424 JRNL PMID 14657338 JRNL DOI 10.1073/PNAS.2436132100 REMARK 2 REMARK 2 RESOLUTION. 4.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1576917.540 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 49660 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : SHELLS REMARK 3 R VALUE (WORKING SET) : 0.340 REMARK 3 FREE R VALUE : 0.387 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.300 REMARK 3 FREE R VALUE TEST SET COUNT : 4666 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 4.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 4.29 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 6729 REMARK 3 BIN R VALUE (WORKING SET) : 0.4318 REMARK 3 BIN FREE R VALUE : 0.4746 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 585 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 13596 REMARK 3 NUCLEIC ACID ATOMS : 4124 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.64 REMARK 3 ESD FROM SIGMAA (A) : 0.52 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.73 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.44 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 2.266 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.930 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : OVERALL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.11 REMARK 3 BSOL : 52.41 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA-ALLATOM.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA-ALLATOM.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE FACTOR DATA ASSOCIATED REMARK 3 WITH THIS FILE IS FROM TWINNED CRYSTAL. TO USE STRUCTURE FACTOR REMARK 3 DATA, THIS DATA WILL HAVE TO BE DETWINNED. REMARK 4 REMARK 4 1QZW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-SEP-03. REMARK 100 THE DEPOSITION ID IS D_1000020273. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-APR-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50447 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 4.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.48100 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ID 1J8M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 81.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 6.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULPHATE, SODIUM CHLORIDE, REMARK 280 SODIUM ACETATE, PH 4.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 102.63133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 205.26267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 GLY A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET C -7 REMARK 465 GLY C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 HIS C -1 REMARK 465 HIS C 0 REMARK 465 MET E -7 REMARK 465 GLY E -6 REMARK 465 HIS E -5 REMARK 465 HIS E -4 REMARK 465 HIS E -3 REMARK 465 HIS E -2 REMARK 465 HIS E -1 REMARK 465 HIS E 0 REMARK 465 MET G -7 REMARK 465 GLY G -6 REMARK 465 HIS G -5 REMARK 465 HIS G -4 REMARK 465 HIS G -3 REMARK 465 HIS G -2 REMARK 465 HIS G -1 REMARK 465 HIS G 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG C 402 N GLY C 406 2.12 REMARK 500 O ARG G 402 N GLY G 406 2.12 REMARK 500 O ARG A 402 N GLY A 406 2.12 REMARK 500 O ARG E 402 N GLY E 406 2.12 REMARK 500 CG1 VAL E 304 OE1 GLU E 308 2.16 REMARK 500 CG ASN C 177 CD1 LEU E 144 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O LYS C 59 O THR E 361 2655 1.08 REMARK 500 CG LYS C 315 NZ LYS E 312 2655 1.56 REMARK 500 CB PRO C 61 O LEU E 359 2655 1.59 REMARK 500 O THR C 361 O LYS E 59 2655 1.59 REMARK 500 CD LYS A 59 O THR G 361 2665 1.73 REMARK 500 OP1 C H 199 NZ LYS E 21 1565 1.83 REMARK 500 CG LYS C 315 CE LYS E 312 2655 1.87 REMARK 500 CG PRO C 61 CA PRO E 360 2655 1.90 REMARK 500 CA GLU C 58 CB PRO E 362 2655 1.91 REMARK 500 O LYS C 59 C THR E 361 2655 1.95 REMARK 500 OE1 GLN A 366 CG ASP E 365 2555 1.95 REMARK 500 CD PRO C 61 CA PRO E 360 2655 1.96 REMARK 500 CB PRO A 362 O LYS G 57 2665 1.99 REMARK 500 CG GLU C 308 CD2 LEU E 359 2655 2.04 REMARK 500 C LYS C 59 O THR E 361 2655 2.07 REMARK 500 O THR A 361 CD LYS G 59 2665 2.10 REMARK 500 CD2 LEU C 359 CB GLU E 308 2655 2.10 REMARK 500 OP1 C B 199 NZ LYS C 21 1455 2.11 REMARK 500 OE1 GLN A 366 OD1 ASP E 365 2555 2.12 REMARK 500 OP2 C F 200 NZ LYS G 21 1545 2.14 REMARK 500 C PRO C 362 CD LYS E 59 2655 2.14 REMARK 500 CB PRO C 61 C LEU E 359 2655 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 U B 217 C5' - C4' - C3' ANGL. DEV. = -23.0 DEGREES REMARK 500 U B 217 C5' - C4' - O4' ANGL. DEV. = -12.1 DEGREES REMARK 500 U B 217 N1 - C1' - C2' ANGL. DEV. = 17.3 DEGREES REMARK 500 G B 218 O3' - P - O5' ANGL. DEV. = 23.6 DEGREES REMARK 500 U D 217 C5' - C4' - C3' ANGL. DEV. = -23.0 DEGREES REMARK 500 U D 217 C5' - C4' - O4' ANGL. DEV. = -12.0 DEGREES REMARK 500 U D 217 N1 - C1' - C2' ANGL. DEV. = 17.3 DEGREES REMARK 500 G D 218 O3' - P - O5' ANGL. DEV. = 23.6 DEGREES REMARK 500 U F 217 C5' - C4' - C3' ANGL. DEV. = -23.1 DEGREES REMARK 500 U F 217 C5' - C4' - O4' ANGL. DEV. = -12.0 DEGREES REMARK 500 U F 217 N1 - C1' - C2' ANGL. DEV. = 17.2 DEGREES REMARK 500 G F 218 O3' - P - O5' ANGL. DEV. = 23.6 DEGREES REMARK 500 U H 217 C5' - C4' - C3' ANGL. DEV. = -23.1 DEGREES REMARK 500 U H 217 C5' - C4' - O4' ANGL. DEV. = -12.0 DEGREES REMARK 500 U H 217 N1 - C1' - C2' ANGL. DEV. = 17.3 DEGREES REMARK 500 G H 218 O3' - P - O5' ANGL. DEV. = 23.6 DEGREES REMARK 500 PRO A 18 C - N - CA ANGL. DEV. = 9.3 DEGREES REMARK 500 LEU A 64 CA - CB - CG ANGL. DEV. = -16.2 DEGREES REMARK 500 PRO A 137 C - N - CA ANGL. DEV. = 12.8 DEGREES REMARK 500 PRO A 353 C - N - CA ANGL. DEV. = 12.8 DEGREES REMARK 500 PRO C 18 C - N - CA ANGL. DEV. = 9.4 DEGREES REMARK 500 LEU C 64 CA - CB - CG ANGL. DEV. = -16.1 DEGREES REMARK 500 PRO C 137 C - N - CA ANGL. DEV. = 12.8 DEGREES REMARK 500 PRO C 353 C - N - CA ANGL. DEV. = 12.7 DEGREES REMARK 500 PRO E 18 C - N - CA ANGL. DEV. = 9.4 DEGREES REMARK 500 LEU E 64 CA - CB - CG ANGL. DEV. = -16.1 DEGREES REMARK 500 PRO E 137 C - N - CA ANGL. DEV. = 12.8 DEGREES REMARK 500 PRO E 353 C - N - CA ANGL. DEV. = 12.7 DEGREES REMARK 500 PRO G 18 C - N - CA ANGL. DEV. = 9.3 DEGREES REMARK 500 LEU G 64 CA - CB - CG ANGL. DEV. = -16.1 DEGREES REMARK 500 PRO G 137 C - N - CA ANGL. DEV. = 12.8 DEGREES REMARK 500 PRO G 353 C - N - CA ANGL. DEV. = 12.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 3 -68.23 -18.38 REMARK 500 ILE A 5 -40.02 -164.65 REMARK 500 ARG A 6 2.31 -59.29 REMARK 500 VAL A 9 -73.01 -49.21 REMARK 500 LEU A 13 63.16 -69.09 REMARK 500 SER A 16 -71.13 -41.57 REMARK 500 PRO A 18 -132.17 -52.06 REMARK 500 TYR A 19 -149.08 -140.82 REMARK 500 GLU A 20 -66.18 18.26 REMARK 500 VAL A 23 -88.17 -54.43 REMARK 500 GLU A 25 -79.65 -46.49 REMARK 500 PHE A 26 -54.63 -27.39 REMARK 500 ILE A 27 -77.58 -45.14 REMARK 500 ASP A 29 -70.84 -47.02 REMARK 500 GLN A 31 -39.11 -37.39 REMARK 500 LYS A 32 -70.72 -68.35 REMARK 500 SER A 33 -20.78 -29.66 REMARK 500 LEU A 34 -80.70 -78.63 REMARK 500 ASP A 38 -108.01 63.00 REMARK 500 VAL A 39 126.32 47.70 REMARK 500 LYS A 42 -58.15 -25.33 REMARK 500 LEU A 43 -83.32 -46.48 REMARK 500 VAL A 44 -67.80 -2.30 REMARK 500 LEU A 47 -78.23 -50.01 REMARK 500 THR A 48 -42.62 -28.67 REMARK 500 ALA A 49 -84.40 -62.81 REMARK 500 LYS A 50 -47.19 -26.34 REMARK 500 ILE A 51 -76.29 -42.84 REMARK 500 GLU A 53 -72.14 -19.96 REMARK 500 ARG A 54 -71.69 -37.81 REMARK 500 LEU A 55 -72.47 -20.32 REMARK 500 ASN A 56 42.88 -69.78 REMARK 500 LYS A 57 16.84 -170.48 REMARK 500 SER A 62 -176.54 -42.45 REMARK 500 LEU A 64 112.37 170.21 REMARK 500 LYS A 67 -61.29 -17.95 REMARK 500 GLU A 68 -80.53 -47.91 REMARK 500 TRP A 69 -60.77 -20.71 REMARK 500 PHE A 70 -58.50 -24.13 REMARK 500 ILE A 71 -70.37 -51.74 REMARK 500 SER A 72 -48.94 -26.52 REMARK 500 VAL A 74 -70.83 -49.39 REMARK 500 ASP A 76 -71.89 -23.38 REMARK 500 SER A 79 -83.91 -46.22 REMARK 500 PHE A 82 -150.27 -93.33 REMARK 500 LYS A 86 122.40 -172.88 REMARK 500 PRO A 88 135.96 -37.58 REMARK 500 PRO A 92 124.44 -37.97 REMARK 500 LYS A 94 -161.02 -167.69 REMARK 500 PRO A 96 -146.90 -77.68 REMARK 500 REMARK 500 THIS ENTRY HAS 822 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINED METHOD: AUTHORS DETERMINED REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINED METHOD: AUTHORS DETERMINED REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1J8M RELATED DB: PDB REMARK 900 SIGNAL RECOGNITION PARTICLE CONSERVED GTPASE DOMAIN FROM A. REMARK 900 AMBIVALENS REMARK 900 RELATED ID: 1HQ1 RELATED DB: PDB REMARK 900 STRUCTURAL AND ENERGETIC ANALYSIS OF RNA RECOGNITION BY A REMARK 900 UNIVERSALLY CONSERVED PROTEIN FROM THE SIGNAL RECOGNITION PARTICLE REMARK 900 RELATED ID: 1QZX RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE COMPLETE CORE OF ARCHAEAL SRP AND REMARK 900 IMPLICATIONS FOR INTER-DOMAIN COMMUNICATION DBREF 1QZW A 1 432 UNP Q97ZE7 SRP54_SULSO 1 432 DBREF 1QZW C 1 432 UNP Q97ZE7 SRP54_SULSO 1 432 DBREF 1QZW E 1 432 UNP Q97ZE7 SRP54_SULSO 1 432 DBREF 1QZW G 1 432 UNP Q97ZE7 SRP54_SULSO 1 432 DBREF 1QZW B 179 225 PDB 1QZW 1QZW 179 225 DBREF 1QZW D 179 225 PDB 1QZW 1QZW 179 225 DBREF 1QZW F 179 225 PDB 1QZW 1QZW 179 225 DBREF 1QZW H 179 225 PDB 1QZW 1QZW 179 225 SEQADV 1QZW MET A -7 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW GLY A -6 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS A -5 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS A -4 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS A -3 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS A -2 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS A -1 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS A 0 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW MET C -7 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW GLY C -6 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS C -5 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS C -4 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS C -3 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS C -2 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS C -1 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS C 0 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW MET E -7 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW GLY E -6 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS E -5 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS E -4 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS E -3 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS E -2 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS E -1 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS E 0 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW MET G -7 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW GLY G -6 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS G -5 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS G -4 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS G -3 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS G -2 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS G -1 UNP Q97ZE7 EXPRESSION TAG SEQADV 1QZW HIS G 0 UNP Q97ZE7 EXPRESSION TAG SEQRES 1 B 47 GTP G C C G G G G G A A C C SEQRES 2 B 47 G G C C A G G C C C G G A SEQRES 3 B 47 A G G G A G C A A C C G U SEQRES 4 B 47 G C C C G G U CCC SEQRES 1 D 47 GTP G C C G G G G G A A C C SEQRES 2 D 47 G G C C A G G C C C G G A SEQRES 3 D 47 A G G G A G C A A C C G U SEQRES 4 D 47 G C C C G G U CCC SEQRES 1 F 47 GTP G C C G G G G G A A C C SEQRES 2 F 47 G G C C A G G C C C G G A SEQRES 3 F 47 A G G G A G C A A C C G U SEQRES 4 F 47 G C C C G G U CCC SEQRES 1 H 47 GTP G C C G G G G G A A C C SEQRES 2 H 47 G G C C A G G C C C G G A SEQRES 3 H 47 A G G G A G C A A C C G U SEQRES 4 H 47 G C C C G G U CCC SEQRES 1 A 440 MET GLY HIS HIS HIS HIS HIS HIS MET LEU GLU ASN ILE SEQRES 2 A 440 ARG ASP ALA VAL ARG LYS PHE LEU THR GLY SER THR PRO SEQRES 3 A 440 TYR GLU LYS ALA VAL ASP GLU PHE ILE LYS ASP LEU GLN SEQRES 4 A 440 LYS SER LEU ILE SER SER ASP VAL ASN VAL LYS LEU VAL SEQRES 5 A 440 PHE SER LEU THR ALA LYS ILE LYS GLU ARG LEU ASN LYS SEQRES 6 A 440 GLU LYS PRO PRO SER VAL LEU GLU ARG LYS GLU TRP PHE SEQRES 7 A 440 ILE SER ILE VAL TYR ASP GLU LEU SER LYS LEU PHE GLY SEQRES 8 A 440 GLY ASP LYS GLU PRO ASN VAL ASN PRO THR LYS LEU PRO SEQRES 9 A 440 PHE ILE ILE MET LEU VAL GLY VAL GLN GLY SER GLY LYS SEQRES 10 A 440 THR THR THR ALA GLY LYS LEU ALA TYR PHE TYR LYS LYS SEQRES 11 A 440 ARG GLY TYR LYS VAL GLY LEU VAL ALA ALA ASP VAL TYR SEQRES 12 A 440 ARG PRO ALA ALA TYR ASP GLN LEU LEU GLN LEU GLY ASN SEQRES 13 A 440 GLN ILE GLY VAL GLN VAL TYR GLY GLU PRO ASN ASN GLN SEQRES 14 A 440 ASN PRO ILE GLU ILE ALA LYS LYS GLY VAL ASP ILE PHE SEQRES 15 A 440 VAL LYS ASN LYS MET ASP ILE ILE ILE VAL ASP THR ALA SEQRES 16 A 440 GLY ARG HIS GLY TYR GLY GLU GLU THR LYS LEU LEU GLU SEQRES 17 A 440 GLU MET LYS GLU MET TYR ASP VAL LEU LYS PRO ASP ASP SEQRES 18 A 440 VAL ILE LEU VAL ILE ASP ALA SER ILE GLY GLN LYS ALA SEQRES 19 A 440 TYR ASP LEU ALA SER ARG PHE HIS GLN ALA SER PRO ILE SEQRES 20 A 440 GLY SER VAL ILE ILE THR LYS MET ASP GLY THR ALA LYS SEQRES 21 A 440 GLY GLY GLY ALA LEU SER ALA VAL VAL ALA THR GLY ALA SEQRES 22 A 440 THR ILE LYS PHE ILE GLY THR GLY GLU LYS ILE ASP GLU SEQRES 23 A 440 LEU GLU THR PHE ASN ALA LYS ARG PHE VAL SER ARG ILE SEQRES 24 A 440 LEU GLY MET GLY ASP ILE GLU SER ILE LEU GLU LYS VAL SEQRES 25 A 440 LYS GLY LEU GLU GLU TYR ASP LYS ILE GLN LYS LYS MET SEQRES 26 A 440 GLU ASP VAL MET GLU GLY LYS GLY LYS LEU THR LEU ARG SEQRES 27 A 440 ASP VAL TYR ALA GLN ILE ILE ALA LEU ARG LYS MET GLY SEQRES 28 A 440 PRO LEU SER LYS VAL LEU GLN HIS ILE PRO GLY LEU GLY SEQRES 29 A 440 ILE MET LEU PRO THR PRO SER GLU ASP GLN LEU LYS ILE SEQRES 30 A 440 GLY GLU GLU LYS ILE ARG ARG TRP LEU ALA ALA LEU ASN SEQRES 31 A 440 SER MET THR TYR LYS GLU LEU GLU ASN PRO ASN ILE ILE SEQRES 32 A 440 ASP LYS SER ARG MET ARG ARG ILE ALA GLU GLY SER GLY SEQRES 33 A 440 LEU GLU VAL GLU GLU VAL ARG GLU LEU LEU GLU TRP TYR SEQRES 34 A 440 ASN ASN MET ASN ARG LEU LEU LYS MET VAL LYS SEQRES 1 C 440 MET GLY HIS HIS HIS HIS HIS HIS MET LEU GLU ASN ILE SEQRES 2 C 440 ARG ASP ALA VAL ARG LYS PHE LEU THR GLY SER THR PRO SEQRES 3 C 440 TYR GLU LYS ALA VAL ASP GLU PHE ILE LYS ASP LEU GLN SEQRES 4 C 440 LYS SER LEU ILE SER SER ASP VAL ASN VAL LYS LEU VAL SEQRES 5 C 440 PHE SER LEU THR ALA LYS ILE LYS GLU ARG LEU ASN LYS SEQRES 6 C 440 GLU LYS PRO PRO SER VAL LEU GLU ARG LYS GLU TRP PHE SEQRES 7 C 440 ILE SER ILE VAL TYR ASP GLU LEU SER LYS LEU PHE GLY SEQRES 8 C 440 GLY ASP LYS GLU PRO ASN VAL ASN PRO THR LYS LEU PRO SEQRES 9 C 440 PHE ILE ILE MET LEU VAL GLY VAL GLN GLY SER GLY LYS SEQRES 10 C 440 THR THR THR ALA GLY LYS LEU ALA TYR PHE TYR LYS LYS SEQRES 11 C 440 ARG GLY TYR LYS VAL GLY LEU VAL ALA ALA ASP VAL TYR SEQRES 12 C 440 ARG PRO ALA ALA TYR ASP GLN LEU LEU GLN LEU GLY ASN SEQRES 13 C 440 GLN ILE GLY VAL GLN VAL TYR GLY GLU PRO ASN ASN GLN SEQRES 14 C 440 ASN PRO ILE GLU ILE ALA LYS LYS GLY VAL ASP ILE PHE SEQRES 15 C 440 VAL LYS ASN LYS MET ASP ILE ILE ILE VAL ASP THR ALA SEQRES 16 C 440 GLY ARG HIS GLY TYR GLY GLU GLU THR LYS LEU LEU GLU SEQRES 17 C 440 GLU MET LYS GLU MET TYR ASP VAL LEU LYS PRO ASP ASP SEQRES 18 C 440 VAL ILE LEU VAL ILE ASP ALA SER ILE GLY GLN LYS ALA SEQRES 19 C 440 TYR ASP LEU ALA SER ARG PHE HIS GLN ALA SER PRO ILE SEQRES 20 C 440 GLY SER VAL ILE ILE THR LYS MET ASP GLY THR ALA LYS SEQRES 21 C 440 GLY GLY GLY ALA LEU SER ALA VAL VAL ALA THR GLY ALA SEQRES 22 C 440 THR ILE LYS PHE ILE GLY THR GLY GLU LYS ILE ASP GLU SEQRES 23 C 440 LEU GLU THR PHE ASN ALA LYS ARG PHE VAL SER ARG ILE SEQRES 24 C 440 LEU GLY MET GLY ASP ILE GLU SER ILE LEU GLU LYS VAL SEQRES 25 C 440 LYS GLY LEU GLU GLU TYR ASP LYS ILE GLN LYS LYS MET SEQRES 26 C 440 GLU ASP VAL MET GLU GLY LYS GLY LYS LEU THR LEU ARG SEQRES 27 C 440 ASP VAL TYR ALA GLN ILE ILE ALA LEU ARG LYS MET GLY SEQRES 28 C 440 PRO LEU SER LYS VAL LEU GLN HIS ILE PRO GLY LEU GLY SEQRES 29 C 440 ILE MET LEU PRO THR PRO SER GLU ASP GLN LEU LYS ILE SEQRES 30 C 440 GLY GLU GLU LYS ILE ARG ARG TRP LEU ALA ALA LEU ASN SEQRES 31 C 440 SER MET THR TYR LYS GLU LEU GLU ASN PRO ASN ILE ILE SEQRES 32 C 440 ASP LYS SER ARG MET ARG ARG ILE ALA GLU GLY SER GLY SEQRES 33 C 440 LEU GLU VAL GLU GLU VAL ARG GLU LEU LEU GLU TRP TYR SEQRES 34 C 440 ASN ASN MET ASN ARG LEU LEU LYS MET VAL LYS SEQRES 1 E 440 MET GLY HIS HIS HIS HIS HIS HIS MET LEU GLU ASN ILE SEQRES 2 E 440 ARG ASP ALA VAL ARG LYS PHE LEU THR GLY SER THR PRO SEQRES 3 E 440 TYR GLU LYS ALA VAL ASP GLU PHE ILE LYS ASP LEU GLN SEQRES 4 E 440 LYS SER LEU ILE SER SER ASP VAL ASN VAL LYS LEU VAL SEQRES 5 E 440 PHE SER LEU THR ALA LYS ILE LYS GLU ARG LEU ASN LYS SEQRES 6 E 440 GLU LYS PRO PRO SER VAL LEU GLU ARG LYS GLU TRP PHE SEQRES 7 E 440 ILE SER ILE VAL TYR ASP GLU LEU SER LYS LEU PHE GLY SEQRES 8 E 440 GLY ASP LYS GLU PRO ASN VAL ASN PRO THR LYS LEU PRO SEQRES 9 E 440 PHE ILE ILE MET LEU VAL GLY VAL GLN GLY SER GLY LYS SEQRES 10 E 440 THR THR THR ALA GLY LYS LEU ALA TYR PHE TYR LYS LYS SEQRES 11 E 440 ARG GLY TYR LYS VAL GLY LEU VAL ALA ALA ASP VAL TYR SEQRES 12 E 440 ARG PRO ALA ALA TYR ASP GLN LEU LEU GLN LEU GLY ASN SEQRES 13 E 440 GLN ILE GLY VAL GLN VAL TYR GLY GLU PRO ASN ASN GLN SEQRES 14 E 440 ASN PRO ILE GLU ILE ALA LYS LYS GLY VAL ASP ILE PHE SEQRES 15 E 440 VAL LYS ASN LYS MET ASP ILE ILE ILE VAL ASP THR ALA SEQRES 16 E 440 GLY ARG HIS GLY TYR GLY GLU GLU THR LYS LEU LEU GLU SEQRES 17 E 440 GLU MET LYS GLU MET TYR ASP VAL LEU LYS PRO ASP ASP SEQRES 18 E 440 VAL ILE LEU VAL ILE ASP ALA SER ILE GLY GLN LYS ALA SEQRES 19 E 440 TYR ASP LEU ALA SER ARG PHE HIS GLN ALA SER PRO ILE SEQRES 20 E 440 GLY SER VAL ILE ILE THR LYS MET ASP GLY THR ALA LYS SEQRES 21 E 440 GLY GLY GLY ALA LEU SER ALA VAL VAL ALA THR GLY ALA SEQRES 22 E 440 THR ILE LYS PHE ILE GLY THR GLY GLU LYS ILE ASP GLU SEQRES 23 E 440 LEU GLU THR PHE ASN ALA LYS ARG PHE VAL SER ARG ILE SEQRES 24 E 440 LEU GLY MET GLY ASP ILE GLU SER ILE LEU GLU LYS VAL SEQRES 25 E 440 LYS GLY LEU GLU GLU TYR ASP LYS ILE GLN LYS LYS MET SEQRES 26 E 440 GLU ASP VAL MET GLU GLY LYS GLY LYS LEU THR LEU ARG SEQRES 27 E 440 ASP VAL TYR ALA GLN ILE ILE ALA LEU ARG LYS MET GLY SEQRES 28 E 440 PRO LEU SER LYS VAL LEU GLN HIS ILE PRO GLY LEU GLY SEQRES 29 E 440 ILE MET LEU PRO THR PRO SER GLU ASP GLN LEU LYS ILE SEQRES 30 E 440 GLY GLU GLU LYS ILE ARG ARG TRP LEU ALA ALA LEU ASN SEQRES 31 E 440 SER MET THR TYR LYS GLU LEU GLU ASN PRO ASN ILE ILE SEQRES 32 E 440 ASP LYS SER ARG MET ARG ARG ILE ALA GLU GLY SER GLY SEQRES 33 E 440 LEU GLU VAL GLU GLU VAL ARG GLU LEU LEU GLU TRP TYR SEQRES 34 E 440 ASN ASN MET ASN ARG LEU LEU LYS MET VAL LYS SEQRES 1 G 440 MET GLY HIS HIS HIS HIS HIS HIS MET LEU GLU ASN ILE SEQRES 2 G 440 ARG ASP ALA VAL ARG LYS PHE LEU THR GLY SER THR PRO SEQRES 3 G 440 TYR GLU LYS ALA VAL ASP GLU PHE ILE LYS ASP LEU GLN SEQRES 4 G 440 LYS SER LEU ILE SER SER ASP VAL ASN VAL LYS LEU VAL SEQRES 5 G 440 PHE SER LEU THR ALA LYS ILE LYS GLU ARG LEU ASN LYS SEQRES 6 G 440 GLU LYS PRO PRO SER VAL LEU GLU ARG LYS GLU TRP PHE SEQRES 7 G 440 ILE SER ILE VAL TYR ASP GLU LEU SER LYS LEU PHE GLY SEQRES 8 G 440 GLY ASP LYS GLU PRO ASN VAL ASN PRO THR LYS LEU PRO SEQRES 9 G 440 PHE ILE ILE MET LEU VAL GLY VAL GLN GLY SER GLY LYS SEQRES 10 G 440 THR THR THR ALA GLY LYS LEU ALA TYR PHE TYR LYS LYS SEQRES 11 G 440 ARG GLY TYR LYS VAL GLY LEU VAL ALA ALA ASP VAL TYR SEQRES 12 G 440 ARG PRO ALA ALA TYR ASP GLN LEU LEU GLN LEU GLY ASN SEQRES 13 G 440 GLN ILE GLY VAL GLN VAL TYR GLY GLU PRO ASN ASN GLN SEQRES 14 G 440 ASN PRO ILE GLU ILE ALA LYS LYS GLY VAL ASP ILE PHE SEQRES 15 G 440 VAL LYS ASN LYS MET ASP ILE ILE ILE VAL ASP THR ALA SEQRES 16 G 440 GLY ARG HIS GLY TYR GLY GLU GLU THR LYS LEU LEU GLU SEQRES 17 G 440 GLU MET LYS GLU MET TYR ASP VAL LEU LYS PRO ASP ASP SEQRES 18 G 440 VAL ILE LEU VAL ILE ASP ALA SER ILE GLY GLN LYS ALA SEQRES 19 G 440 TYR ASP LEU ALA SER ARG PHE HIS GLN ALA SER PRO ILE SEQRES 20 G 440 GLY SER VAL ILE ILE THR LYS MET ASP GLY THR ALA LYS SEQRES 21 G 440 GLY GLY GLY ALA LEU SER ALA VAL VAL ALA THR GLY ALA SEQRES 22 G 440 THR ILE LYS PHE ILE GLY THR GLY GLU LYS ILE ASP GLU SEQRES 23 G 440 LEU GLU THR PHE ASN ALA LYS ARG PHE VAL SER ARG ILE SEQRES 24 G 440 LEU GLY MET GLY ASP ILE GLU SER ILE LEU GLU LYS VAL SEQRES 25 G 440 LYS GLY LEU GLU GLU TYR ASP LYS ILE GLN LYS LYS MET SEQRES 26 G 440 GLU ASP VAL MET GLU GLY LYS GLY LYS LEU THR LEU ARG SEQRES 27 G 440 ASP VAL TYR ALA GLN ILE ILE ALA LEU ARG LYS MET GLY SEQRES 28 G 440 PRO LEU SER LYS VAL LEU GLN HIS ILE PRO GLY LEU GLY SEQRES 29 G 440 ILE MET LEU PRO THR PRO SER GLU ASP GLN LEU LYS ILE SEQRES 30 G 440 GLY GLU GLU LYS ILE ARG ARG TRP LEU ALA ALA LEU ASN SEQRES 31 G 440 SER MET THR TYR LYS GLU LEU GLU ASN PRO ASN ILE ILE SEQRES 32 G 440 ASP LYS SER ARG MET ARG ARG ILE ALA GLU GLY SER GLY SEQRES 33 G 440 LEU GLU VAL GLU GLU VAL ARG GLU LEU LEU GLU TRP TYR SEQRES 34 G 440 ASN ASN MET ASN ARG LEU LEU LYS MET VAL LYS MODRES 1QZW GTP B 179 G GUANOSINE-5'-TRIPHOSPHATE MODRES 1QZW CCC B 225 C MODRES 1QZW GTP D 179 G GUANOSINE-5'-TRIPHOSPHATE MODRES 1QZW CCC D 225 C MODRES 1QZW GTP F 179 G GUANOSINE-5'-TRIPHOSPHATE MODRES 1QZW CCC F 225 C MODRES 1QZW GTP H 179 G GUANOSINE-5'-TRIPHOSPHATE MODRES 1QZW CCC H 225 C HET GTP B 179 32 HET CCC B 225 23 HET GTP D 179 32 HET CCC D 225 23 HET GTP F 179 32 HET CCC F 225 23 HET GTP H 179 32 HET CCC H 225 23 HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM CCC CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE FORMUL 1 GTP 4(C10 H16 N5 O14 P3) FORMUL 1 CCC 4(C9 H13 N3 O10 P2) HELIX 1 1 LEU A 2 THR A 14 1 13 HELIX 2 2 PRO A 18 SER A 37 1 20 HELIX 3 3 ASN A 40 GLU A 58 1 19 HELIX 4 5 GLU A 65 PHE A 82 1 18 HELIX 5 6 THR A 110 ARG A 123 1 14 HELIX 6 8 PRO A 137 GLY A 151 1 15 HELIX 7 8 ASN A 162 ASN A 177 1 16 HELIX 8 9 GLU A 194 LYS A 210 1 17 HELIX 9 10 SER A 221 LYS A 225 1 5 HELIX 10 11 ALA A 226 ALA A 236 1 11 HELIX 11 12 LYS A 246 THR A 250 1 5 HELIX 12 13 LYS A 252 ALA A 262 1 11 HELIX 13 14 ASN A 283 ARG A 290 1 8 HELIX 14 15 GLY A 295 ILE A 313 1 19 HELIX 15 16 LEU A 329 LYS A 341 1 13 HELIX 16 17 LEU A 345 ILE A 352 1 8 HELIX 17 18 LYS A 373 SER A 383 1 11 HELIX 18 19 TYR A 386 ASN A 391 1 6 HELIX 19 20 ASP A 396 SER A 407 1 12 HELIX 20 21 VAL A 411 LYS A 429 1 19 HELIX 21 22 LEU C 2 THR C 14 1 13 HELIX 22 23 PRO C 18 SER C 37 1 20 HELIX 23 25 ASN C 40 GLU C 58 1 19 HELIX 24 26 GLU C 65 PHE C 82 1 18 HELIX 25 25 THR C 110 ARG C 123 1 14 HELIX 26 28 PRO C 137 GLY C 151 1 15 HELIX 27 29 ASN C 162 ASN C 177 1 16 HELIX 28 30 GLU C 194 LYS C 210 1 17 HELIX 29 31 SER C 221 LYS C 225 1 5 HELIX 30 32 ALA C 226 ALA C 236 1 11 HELIX 31 33 LYS C 246 THR C 250 1 5 HELIX 32 34 LYS C 252 ALA C 262 1 11 HELIX 33 35 ASN C 283 ARG C 290 1 8 HELIX 34 36 GLY C 295 ILE C 313 1 19 HELIX 35 37 LEU C 329 LYS C 341 1 13 HELIX 36 38 LEU C 345 ILE C 352 1 8 HELIX 37 39 LYS C 373 SER C 383 1 11 HELIX 38 40 TYR C 386 ASN C 391 1 6 HELIX 39 41 ASP C 396 SER C 407 1 12 HELIX 40 42 VAL C 411 LYS C 429 1 19 HELIX 41 43 LEU E 2 THR E 14 1 13 HELIX 42 44 PRO E 18 SER E 37 1 20 HELIX 43 45 ASN E 40 GLU E 58 1 19 HELIX 44 47 GLU E 65 PHE E 82 1 18 HELIX 45 48 THR E 110 ARG E 123 1 14 HELIX 46 49 PRO E 137 GLY E 151 1 15 HELIX 47 50 ASN E 162 ASN E 177 1 16 HELIX 48 51 GLU E 194 LYS E 210 1 17 HELIX 49 52 SER E 221 LYS E 225 1 5 HELIX 50 53 ALA E 226 ALA E 236 1 11 HELIX 51 54 LYS E 246 THR E 250 1 5 HELIX 52 55 LYS E 252 ALA E 262 1 11 HELIX 53 55 ASN E 283 ARG E 290 1 8 HELIX 54 56 GLY E 295 ILE E 313 1 19 HELIX 55 57 LEU E 329 LYS E 341 1 13 HELIX 56 58 LEU E 345 ILE E 352 1 8 HELIX 57 59 LYS E 373 SER E 383 1 11 HELIX 58 60 TYR E 386 ASN E 391 1 6 HELIX 59 61 ASP E 396 SER E 407 1 12 HELIX 60 62 VAL E 411 LYS E 429 1 19 HELIX 61 63 LEU G 2 THR G 14 1 13 HELIX 62 64 PRO G 18 SER G 37 1 20 HELIX 63 65 ASN G 40 GLU G 58 1 19 HELIX 64 67 GLU G 65 PHE G 82 1 18 HELIX 65 68 THR G 110 ARG G 123 1 14 HELIX 66 69 PRO G 137 GLY G 151 1 15 HELIX 67 70 ASN G 162 ASN G 177 1 16 HELIX 68 71 GLU G 194 LYS G 210 1 17 HELIX 69 71 SER G 221 LYS G 225 1 5 HELIX 70 73 ALA G 226 ALA G 236 1 11 HELIX 71 74 LYS G 246 THR G 250 1 5 HELIX 72 75 LYS G 252 ALA G 262 1 11 HELIX 73 76 ASN G 283 ARG G 290 1 8 HELIX 74 77 GLY G 295 ILE G 313 1 19 HELIX 75 78 LEU G 329 LYS G 341 1 13 HELIX 76 79 LEU G 345 ILE G 352 1 8 HELIX 77 80 LYS G 373 SER G 383 1 11 HELIX 78 81 TYR G 386 ASN G 391 1 6 HELIX 79 82 ASP G 396 SER G 407 1 12 HELIX 80 83 VAL G 411 LYS G 429 1 19 SHEET 1 A 8 PHE A 97 VAL A 102 0 SHEET 2 A 8 VAL A 127 ALA A 131 1 SHEET 3 A 8 VAL A 154 TYR A 155 1 SHEET 4 A 8 ILE A 181 ASP A 185 1 SHEET 5 A 8 ASP A 213 ASP A 219 1 SHEET 6 A 8 GLY A 240 THR A 245 1 SHEET 7 A 8 ILE A 267 GLY A 271 1 SHEET 8 A 8 LEU A 279 THR A 281 1 SHEET 1 C 8 PHE C 97 VAL C 102 0 SHEET 2 C 8 VAL C 127 ALA C 131 1 SHEET 3 C 8 VAL C 154 TYR C 155 1 SHEET 4 C 8 ILE C 181 ASP C 185 1 SHEET 5 C 8 ASP C 213 ASP C 219 1 SHEET 6 C 8 GLY C 240 THR C 245 1 SHEET 7 C 8 ILE C 267 GLY C 271 1 SHEET 8 C 8 LEU C 279 THR C 281 1 SHEET 1 E 8 PHE E 97 VAL E 102 0 SHEET 2 E 8 VAL E 127 ALA E 131 1 SHEET 3 E 8 VAL E 154 TYR E 155 1 SHEET 4 E 8 ILE E 181 ASP E 185 1 SHEET 5 E 8 ASP E 213 ASP E 219 1 SHEET 6 E 8 GLY E 240 THR E 245 1 SHEET 7 E 8 ILE E 267 GLY E 271 1 SHEET 8 E 8 LEU E 279 THR E 281 1 SHEET 1 G 8 PHE G 97 VAL G 102 0 SHEET 2 G 8 VAL G 127 ALA G 131 1 SHEET 3 G 8 VAL G 154 TYR G 155 1 SHEET 4 G 8 ILE G 181 ASP G 185 1 SHEET 5 G 8 ASP G 213 ASP G 219 1 SHEET 6 G 8 GLY G 240 THR G 245 1 SHEET 7 G 8 ILE G 267 GLY G 271 1 SHEET 8 G 8 LEU G 279 THR G 281 1 LINK O3' GTP B 179 P G B 180 1555 1555 1.60 LINK O3' U B 224 P CCC B 225 1555 1555 1.61 LINK O3' GTP D 179 P G D 180 1555 1555 1.60 LINK O3' U D 224 P CCC D 225 1555 1555 1.61 LINK O3' GTP F 179 P G F 180 1555 1555 1.60 LINK O3' U F 224 P CCC F 225 1555 1555 1.61 LINK O3' GTP H 179 P G H 180 1555 1555 1.60 LINK O3' U H 224 P CCC H 225 1555 1555 1.61 CISPEP 1 LEU A 95 PRO A 96 0 -0.15 CISPEP 2 LEU C 95 PRO C 96 0 -0.19 CISPEP 3 LEU E 95 PRO E 96 0 -0.14 CISPEP 4 LEU G 95 PRO G 96 0 -0.16 CRYST1 137.763 137.763 307.894 90.00 90.00 120.00 P 31 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007259 0.004191 0.000000 0.00000 SCALE2 0.000000 0.008382 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003248 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 -0.999600 -0.007500 -0.027310 -66.44145 1 MTRIX2 2 0.007200 -0.999910 0.010890 118.97550 1 MTRIX3 2 -0.027390 0.010690 0.999570 -0.65354 1 MTRIX1 3 -0.496380 -0.868040 0.010220 -0.16039 1 MTRIX2 3 -0.867940 0.496020 -0.025430 1.77392 1 MTRIX3 3 0.017000 -0.021490 -0.999620 207.51863 1 MTRIX1 4 0.496500 -0.868030 0.002680 69.02411 1 MTRIX2 4 -0.868020 -0.496470 0.007880 118.55315 1 MTRIX3 4 -0.005510 -0.006240 -0.999970 103.94876 1 HETATM 1 PG GTP B 179 -4.497 120.556 68.189 1.00 70.95 P HETATM 2 O1G GTP B 179 -5.661 119.757 67.440 1.00 70.95 O HETATM 3 O2G GTP B 179 -5.198 121.851 68.416 1.00 70.95 O HETATM 4 O3G GTP B 179 -3.330 120.184 67.338 1.00 70.95 O HETATM 5 O3B GTP B 179 -4.490 119.752 69.486 1.00 70.95 O HETATM 6 PB GTP B 179 -3.707 118.447 69.631 1.00 70.95 P HETATM 7 O1B GTP B 179 -2.310 118.860 69.761 1.00 70.95 O HETATM 8 O2B GTP B 179 -3.948 117.661 70.887 1.00 70.95 O HETATM 9 O3A GTP B 179 -3.535 117.843 68.467 1.00 70.95 O HETATM 10 PA GTP B 179 -4.539 116.655 68.311 1.00 70.95 P HETATM 11 O1A GTP B 179 -5.879 117.375 68.565 1.00 70.95 O HETATM 12 O2A GTP B 179 -4.145 115.564 69.321 1.00 70.95 O HETATM 13 O5' GTP B 179 -4.475 116.050 66.830 1.00 70.95 O HETATM 14 C5' GTP B 179 -4.237 116.879 65.671 1.00 70.95 C HETATM 15 C4' GTP B 179 -2.768 116.848 65.239 1.00 70.95 C HETATM 16 O4' GTP B 179 -1.904 117.400 66.291 1.00 70.95 O HETATM 17 C3' GTP B 179 -2.149 115.490 64.923 1.00 70.95 C HETATM 18 O3' GTP B 179 -2.537 114.639 66.016 1.00 70.95 O HETATM 19 C2' GTP B 179 -0.656 115.805 65.067 1.00 70.95 C HETATM 20 O2' GTP B 179 -0.022 116.442 63.971 1.00 70.95 O HETATM 21 C1' GTP B 179 -0.652 116.708 66.307 1.00 70.95 C HETATM 22 N9 GTP B 179 -0.576 115.836 67.484 1.00 70.95 N HETATM 23 C8 GTP B 179 -1.303 115.904 68.649 1.00 70.95 C HETATM 24 N7 GTP B 179 -1.095 114.886 69.447 1.00 70.95 N HETATM 25 C5 GTP B 179 -0.142 114.111 68.787 1.00 70.95 C HETATM 26 C6 GTP B 179 0.495 112.857 69.161 1.00 70.95 C HETATM 27 O6 GTP B 179 0.322 112.160 70.186 1.00 70.95 O HETATM 28 N1 GTP B 179 1.406 112.437 68.186 1.00 70.95 N HETATM 29 C2 GTP B 179 1.680 113.112 67.014 1.00 70.95 C HETATM 30 N2 GTP B 179 2.585 112.545 66.197 1.00 70.95 N HETATM 31 N3 GTP B 179 1.107 114.260 66.663 1.00 70.95 N HETATM 32 C4 GTP B 179 0.213 114.697 67.588 1.00 70.95 C