PDB Short entry for 1RGX HEADER HORMONE/GROWTH FACTOR 13-NOV-03 1RGX TITLE CRYSTAL STRUCTURE OF RESISITIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: RESISTIN; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: CYSTEINE-RICH SECRETED PROTEIN FIZZ3; ADIPOSE TISSUE- COMPND 5 SPECIFIC SECRETORY FACTOR; ADSF; ADIPOSE-SPECIFIC CYSTEINE-RICH COMPND 6 SECRETED PROTEIN A12-ALPHA; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: RETN; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFM1 KEYWDS HORMONE; GLUCOSE UPTAKE; RESISTIN/FIZZ FAMILY, STRUCTURAL GENOMICS, KEYWDS 2 PSI, PROTEIN STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, NYSGXRC, HORMONE-GROWTH FACTOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.D.PATEL,M.W.RAJALA,P.E.SCHERER,L.SHAPIRO,S.K.BURLEY,NEW YORK SGX AUTHOR 2 RESEARCH CENTER FOR STRUCTURAL GENOMICS (NYSGXRC) REVDAT 6 23-AUG-23 1RGX 1 REMARK REVDAT 5 03-FEB-21 1RGX 1 AUTHOR REVDAT 4 13-JUL-11 1RGX 1 VERSN REVDAT 3 24-FEB-09 1RGX 1 VERSN REVDAT 2 25-JAN-05 1RGX 1 AUTHOR KEYWDS REMARK REVDAT 1 08-JUN-04 1RGX 0 JRNL AUTH S.D.PATEL,M.W.RAJALA,L.ROSSETTI,P.E.SCHERER,L.SHAPIRO JRNL TITL DISULFIDE-DEPENDENT MULTIMERIC ASSEMBLY OF RESISTIN FAMILY JRNL TITL 2 HORMONES JRNL REF SCIENCE V. 304 1154 2004 JRNL REFN ISSN 0036-8075 JRNL PMID 15155948 JRNL DOI 10.1126/SCIENCE.1093466 REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.9999 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 17.82 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 21591 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1087 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.79 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1467 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2090 REMARK 3 BIN FREE R VALUE SET COUNT : 53 REMARK 3 BIN FREE R VALUE : 0.2590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2000 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 179 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.23000 REMARK 3 B22 (A**2) : -0.47000 REMARK 3 B33 (A**2) : 0.24000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.154 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.143 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.103 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.541 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2053 ; 0.008 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1818 ; 0.007 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2789 ; 1.844 ; 1.943 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4247 ; 0.785 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 269 ; 6.190 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 72 ;35.811 ;24.167 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 344 ;13.948 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;13.693 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 315 ; 0.070 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2283 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 388 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 428 ; 0.200 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1827 ; 0.202 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1160 ; 0.087 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 119 ; 0.119 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 23 ; 0.268 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 71 ; 0.241 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 23 ; 0.174 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1426 ; 0.660 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 555 ; 0.072 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2164 ; 0.992 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 784 ; 1.167 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 625 ; 1.609 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 94 REMARK 3 ORIGIN FOR THE GROUP (A): 5.3150 -1.3710 7.8300 REMARK 3 T TENSOR REMARK 3 T11: -0.0056 T22: 0.2807 REMARK 3 T33: -0.1014 T12: -0.0773 REMARK 3 T13: 0.1163 T23: -0.0669 REMARK 3 L TENSOR REMARK 3 L11: 3.3077 L22: 1.1646 REMARK 3 L33: 1.4337 L12: 1.2515 REMARK 3 L13: -0.5635 L23: -0.4076 REMARK 3 S TENSOR REMARK 3 S11: -0.3791 S12: 0.6535 S13: -0.3096 REMARK 3 S21: -0.1785 S22: 0.2765 S23: -0.2448 REMARK 3 S31: 0.2391 S32: -0.2109 S33: 0.1027 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 9 B 94 REMARK 3 ORIGIN FOR THE GROUP (A): 10.1530 -4.6870 21.2520 REMARK 3 T TENSOR REMARK 3 T11: -0.0465 T22: 0.2476 REMARK 3 T33: -0.1051 T12: 0.0348 REMARK 3 T13: 0.0314 T23: 0.0326 REMARK 3 L TENSOR REMARK 3 L11: 1.9403 L22: 0.6778 REMARK 3 L33: 3.1796 L12: -0.2324 REMARK 3 L13: -0.7158 L23: -0.0404 REMARK 3 S TENSOR REMARK 3 S11: -0.0964 S12: -0.3377 S13: -0.1082 REMARK 3 S21: 0.0399 S22: 0.0395 S23: -0.0698 REMARK 3 S31: 0.2768 S32: 0.5019 S33: 0.0569 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 94 REMARK 3 ORIGIN FOR THE GROUP (A): -3.6130 3.2090 26.3650 REMARK 3 T TENSOR REMARK 3 T11: -0.0107 T22: 0.1616 REMARK 3 T33: -0.1294 T12: 0.0208 REMARK 3 T13: 0.0676 T23: 0.0289 REMARK 3 L TENSOR REMARK 3 L11: 4.7232 L22: 0.4311 REMARK 3 L33: 0.9532 L12: -0.5071 REMARK 3 L13: -1.0603 L23: 0.2343 REMARK 3 S TENSOR REMARK 3 S11: 0.1974 S12: -0.2735 S13: 0.4442 REMARK 3 S21: 0.0088 S22: 0.0169 S23: -0.0581 REMARK 3 S31: -0.0699 S32: -0.0963 S33: -0.2143 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1RGX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-NOV-03. REMARK 100 THE DEPOSITION ID IS D_1000020736. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-00 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0542517 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MACSCIENCE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21591 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.787 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 17.30 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.24900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1RFX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40% MPD, 8% PEG 5000MME, 0.2M MGCL2, REMARK 280 0.1M NA ACETATE PH 5.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 24.51050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.23750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 24.51050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 26.23750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -143.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -60.00771 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 95.98224 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 LYS A -18 REMARK 465 ASN A -17 REMARK 465 LEU A -16 REMARK 465 SER A -15 REMARK 465 PHE A -14 REMARK 465 PRO A -13 REMARK 465 LEU A -12 REMARK 465 LEU A -11 REMARK 465 PHE A -10 REMARK 465 LEU A -9 REMARK 465 PHE A -8 REMARK 465 PHE A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 GLU A -3 REMARK 465 LEU A -2 REMARK 465 LEU A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 SER A 2 REMARK 465 MET A 3 REMARK 465 PRO A 4 REMARK 465 LEU A 5 REMARK 465 MET B -19 REMARK 465 LYS B -18 REMARK 465 ASN B -17 REMARK 465 LEU B -16 REMARK 465 SER B -15 REMARK 465 PHE B -14 REMARK 465 PRO B -13 REMARK 465 LEU B -12 REMARK 465 LEU B -11 REMARK 465 PHE B -10 REMARK 465 LEU B -9 REMARK 465 PHE B -8 REMARK 465 PHE B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 GLU B -3 REMARK 465 LEU B -2 REMARK 465 LEU B -1 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 SER B 2 REMARK 465 MET B 3 REMARK 465 PRO B 4 REMARK 465 LEU B 5 REMARK 465 MET C -19 REMARK 465 LYS C -18 REMARK 465 ASN C -17 REMARK 465 LEU C -16 REMARK 465 SER C -15 REMARK 465 PHE C -14 REMARK 465 PRO C -13 REMARK 465 LEU C -12 REMARK 465 LEU C -11 REMARK 465 PHE C -10 REMARK 465 LEU C -9 REMARK 465 PHE C -8 REMARK 465 PHE C -7 REMARK 465 LEU C -6 REMARK 465 VAL C -5 REMARK 465 PRO C -4 REMARK 465 GLU C -3 REMARK 465 LEU C -2 REMARK 465 LEU C -1 REMARK 465 GLY C 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 9 CG OD1 OD2 REMARK 470 LYS A 14 CG CD CE NZ REMARK 470 LYS A 15 CG CD CE NZ REMARK 470 GLN A 18 CG CD OE1 NE2 REMARK 470 ASP B 9 CG OD1 OD2 REMARK 470 GLU B 10 CG CD OE1 OE2 REMARK 470 ASP B 13 CG OD1 OD2 REMARK 470 LYS B 15 CD CE NZ REMARK 470 ASN B 26 CG OD1 ND2 REMARK 470 LYS B 29 CG CD CE NZ REMARK 470 GLN C 18 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 94 C SER A 94 OXT 0.643 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 81 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP C 81 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 7 -74.64 -85.26 REMARK 500 LYS A 71 -38.84 -138.65 REMARK 500 PRO B 7 91.05 -62.62 REMARK 500 ILE B 8 -50.80 160.56 REMARK 500 LYS B 71 -34.82 -143.10 REMARK 500 SER C 2 77.85 52.90 REMARK 500 LYS C 71 -33.00 -141.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1RFX RELATED DB: PDB REMARK 900 RELATED ID: 1RH7 RELATED DB: PDB REMARK 900 RELATED ID: NYSGXRC-T127 RELATED DB: TARGETDB DBREF 1RGX A -19 94 UNP Q99P87 RSN_MOUSE 1 114 DBREF 1RGX B -19 94 UNP Q99P87 RSN_MOUSE 1 114 DBREF 1RGX C -19 94 UNP Q99P87 RSN_MOUSE 1 114 SEQRES 1 A 114 MET LYS ASN LEU SER PHE PRO LEU LEU PHE LEU PHE PHE SEQRES 2 A 114 LEU VAL PRO GLU LEU LEU GLY SER SER MET PRO LEU CYS SEQRES 3 A 114 PRO ILE ASP GLU ALA ILE ASP LYS LYS ILE LYS GLN ASP SEQRES 4 A 114 PHE ASN SER LEU PHE PRO ASN ALA ILE LYS ASN ILE GLY SEQRES 5 A 114 LEU ASN CYS TRP THR VAL SER SER ARG GLY LYS LEU ALA SEQRES 6 A 114 SER CYS PRO GLU GLY THR ALA VAL LEU SER CYS SER CYS SEQRES 7 A 114 GLY SER ALA CYS GLY SER TRP ASP ILE ARG GLU GLU LYS SEQRES 8 A 114 VAL CYS HIS CYS GLN CYS ALA ARG ILE ASP TRP THR ALA SEQRES 9 A 114 ALA ARG CYS CYS LYS LEU GLN VAL ALA SER SEQRES 1 B 114 MET LYS ASN LEU SER PHE PRO LEU LEU PHE LEU PHE PHE SEQRES 2 B 114 LEU VAL PRO GLU LEU LEU GLY SER SER MET PRO LEU CYS SEQRES 3 B 114 PRO ILE ASP GLU ALA ILE ASP LYS LYS ILE LYS GLN ASP SEQRES 4 B 114 PHE ASN SER LEU PHE PRO ASN ALA ILE LYS ASN ILE GLY SEQRES 5 B 114 LEU ASN CYS TRP THR VAL SER SER ARG GLY LYS LEU ALA SEQRES 6 B 114 SER CYS PRO GLU GLY THR ALA VAL LEU SER CYS SER CYS SEQRES 7 B 114 GLY SER ALA CYS GLY SER TRP ASP ILE ARG GLU GLU LYS SEQRES 8 B 114 VAL CYS HIS CYS GLN CYS ALA ARG ILE ASP TRP THR ALA SEQRES 9 B 114 ALA ARG CYS CYS LYS LEU GLN VAL ALA SER SEQRES 1 C 114 MET LYS ASN LEU SER PHE PRO LEU LEU PHE LEU PHE PHE SEQRES 2 C 114 LEU VAL PRO GLU LEU LEU GLY SER SER MET PRO LEU CYS SEQRES 3 C 114 PRO ILE ASP GLU ALA ILE ASP LYS LYS ILE LYS GLN ASP SEQRES 4 C 114 PHE ASN SER LEU PHE PRO ASN ALA ILE LYS ASN ILE GLY SEQRES 5 C 114 LEU ASN CYS TRP THR VAL SER SER ARG GLY LYS LEU ALA SEQRES 6 C 114 SER CYS PRO GLU GLY THR ALA VAL LEU SER CYS SER CYS SEQRES 7 C 114 GLY SER ALA CYS GLY SER TRP ASP ILE ARG GLU GLU LYS SEQRES 8 C 114 VAL CYS HIS CYS GLN CYS ALA ARG ILE ASP TRP THR ALA SEQRES 9 C 114 ALA ARG CYS CYS LYS LEU GLN VAL ALA SER FORMUL 4 HOH *179(H2 O) HELIX 1 1 PRO A 7 LYS A 29 1 23 HELIX 2 2 ILE B 8 ASN B 30 1 23 HELIX 3 3 CYS C 6 LYS C 29 1 24 SHEET 1 A 3 ILE A 31 ARG A 41 0 SHEET 2 A 3 TRP A 82 VAL A 92 -1 O LYS A 89 N ASN A 34 SHEET 3 A 3 ALA A 52 CYS A 58 -1 N ALA A 52 O CYS A 88 SHEET 1 B 3 LEU A 44 SER A 46 0 SHEET 2 B 3 VAL A 72 CYS A 75 -1 O CYS A 73 N ALA A 45 SHEET 3 B 3 TRP A 65 ARG A 68 -1 N ARG A 68 O VAL A 72 SHEET 1 C 3 ILE B 31 ARG B 41 0 SHEET 2 C 3 TRP B 82 VAL B 92 -1 O LYS B 89 N ASN B 34 SHEET 3 C 3 ALA B 52 CYS B 58 -1 N SER B 57 O ALA B 84 SHEET 1 D 3 LEU B 44 SER B 46 0 SHEET 2 D 3 VAL B 72 CYS B 75 -1 O CYS B 73 N ALA B 45 SHEET 3 D 3 TRP B 65 ARG B 68 -1 N ARG B 68 O VAL B 72 SHEET 1 E 3 ILE C 31 ARG C 41 0 SHEET 2 E 3 TRP C 82 VAL C 92 -1 O LYS C 89 N ASN C 34 SHEET 3 E 3 ALA C 52 CYS C 58 -1 N ALA C 52 O CYS C 88 SHEET 1 F 3 LEU C 44 SER C 46 0 SHEET 2 F 3 VAL C 72 CYS C 75 -1 O CYS C 73 N ALA C 45 SHEET 3 F 3 TRP C 65 ARG C 68 -1 N ARG C 68 O VAL C 72 SSBOND 1 CYS A 35 CYS A 88 1555 1555 2.03 SSBOND 2 CYS A 47 CYS A 87 1555 1555 2.03 SSBOND 3 CYS A 56 CYS A 73 1555 1555 2.03 SSBOND 4 CYS A 58 CYS A 75 1555 1555 2.02 SSBOND 5 CYS A 62 CYS A 77 1555 1555 2.03 SSBOND 6 CYS B 6 CYS B 6 1555 2456 2.73 SSBOND 7 CYS B 35 CYS B 88 1555 1555 2.03 SSBOND 8 CYS B 47 CYS B 87 1555 1555 2.02 SSBOND 9 CYS B 56 CYS B 73 1555 1555 2.02 SSBOND 10 CYS B 58 CYS B 75 1555 1555 2.03 SSBOND 11 CYS B 62 CYS B 77 1555 1555 2.04 SSBOND 12 CYS C 35 CYS C 88 1555 1555 2.03 SSBOND 13 CYS C 47 CYS C 87 1555 1555 2.03 SSBOND 14 CYS C 56 CYS C 73 1555 1555 2.03 SSBOND 15 CYS C 58 CYS C 75 1555 1555 2.03 SSBOND 16 CYS C 62 CYS C 77 1555 1555 2.03 CRYST1 49.021 52.475 96.609 90.00 96.53 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020399 0.000000 0.002335 0.00000 SCALE2 0.000000 0.019057 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010419 0.00000