PDB Short entry for 1RM0 HEADER ISOMERASE 26-NOV-03 1RM0 TITLE CRYSTAL STRUCTURE OF MYO-INOSITOL 1-PHOSPHATE SYNTHASE FROM TITLE 2 SACCHAROMYCES CEREVISIAE IN COMPLEX WITH NAD+ AND 2-DEOXY-D-GLUCITOL TITLE 3 6-(E)-VINYLHOMOPHOSPHONATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYO-INOSITOL-PHOSPHATE SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 5.5.1.4; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: INO1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MYO-INOSITOL 1-PHOSPHATE SYNTHASE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR X.JIN,K.M.FOLEY,J.H.GEIGER REVDAT 4 14-FEB-24 1RM0 1 REMARK LINK REVDAT 3 13-JUL-11 1RM0 1 VERSN REVDAT 2 24-FEB-09 1RM0 1 VERSN REVDAT 1 25-MAY-04 1RM0 0 JRNL AUTH X.JIN,K.M.FOLEY,J.H.GEIGER JRNL TITL THE STRUCTURE OF THE 1L-MYO-INOSITOL-1-PHOSPHATE JRNL TITL 2 SYNTHASE-NAD+-2-DEOXY-D-GLUCITOL 6-(E)-VINYLHOMOPHOSPHONATE JRNL TITL 3 COMPLEX DEMANDS A REVISION OF THE ENZYME MECHANISM. JRNL REF J.BIOL.CHEM. V. 279 13889 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 14684747 JRNL DOI 10.1074/JBC.M308986200 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 89840 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 8990 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8211 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 104 REMARK 3 SOLVENT ATOMS : 372 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1RM0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-DEC-03. REMARK 100 THE DEPOSITION ID IS D_1000020874. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-AUG-02 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0093 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 110431 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 35.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, SODIUM ACETATE, PH 5.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 75.90500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.89000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 75.90500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 48.89000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 35060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 68110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -222.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 GLU A 3 REMARK 465 ASP A 4 REMARK 465 ASN A 5 REMARK 465 ILE A 6 REMARK 465 ALA A 7 REMARK 465 PRO A 8 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 GLU B 3 REMARK 465 ASP B 4 REMARK 465 ASN B 5 REMARK 465 ILE B 6 REMARK 465 ALA B 7 REMARK 465 PRO B 8 REMARK 465 ILE B 9 REMARK 465 ASP B 465 REMARK 465 PRO B 466 REMARK 465 VAL B 467 REMARK 465 LYS B 468 REMARK 465 GLU B 469 REMARK 465 ASP B 470 REMARK 465 ALA B 471 REMARK 465 GLY B 472 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 23 64.59 61.28 REMARK 500 SER A 145 -159.44 -156.17 REMARK 500 ASN A 200 20.25 -141.19 REMARK 500 ASP A 206 -172.27 -69.71 REMARK 500 VAL A 257 -66.65 -108.66 REMARK 500 ALA A 317 165.32 178.35 REMARK 500 ASP A 319 81.39 95.64 REMARK 500 ASP A 320 133.51 70.26 REMARK 500 PRO A 479 -53.42 -27.91 REMARK 500 ASP B 23 78.81 63.05 REMARK 500 ASN B 34 -151.53 -164.66 REMARK 500 ALA B 35 147.15 -172.56 REMARK 500 ASP B 148 142.24 -170.63 REMARK 500 ASN B 194 -19.46 -49.50 REMARK 500 ASP B 196 -83.72 -101.86 REMARK 500 GLU B 197 3.48 -58.57 REMARK 500 GLU B 207 12.90 -66.77 REMARK 500 THR B 244 46.31 -141.51 REMARK 500 TYR B 250 143.00 -32.51 REMARK 500 ASN B 258 28.30 -142.81 REMARK 500 GLN B 298 151.48 -49.08 REMARK 500 ALA B 317 164.99 179.35 REMARK 500 ASP B 319 78.80 101.36 REMARK 500 ASP B 320 128.51 76.04 REMARK 500 LYS B 322 98.70 -55.09 REMARK 500 CYS B 436 155.72 177.77 REMARK 500 LYS B 463 -177.75 -68.33 REMARK 500 TYR B 478 126.57 -31.09 REMARK 500 PRO B 479 -52.86 -18.73 REMARK 500 ALA B 490 61.42 -117.31 REMARK 500 PRO B 491 116.23 -36.57 REMARK 500 ARG B 527 56.26 36.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 630 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 439 OG REMARK 620 2 NAI A 650 N7N 138.0 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 630 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE D6P A 1520 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAI A 650 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAI B 660 DBREF 1RM0 A 1 533 GB 854544 CAA60802 23 555 DBREF 1RM0 B 1 533 GB 854544 CAA60802 23 555 SEQRES 1 A 533 MET THR GLU ASP ASN ILE ALA PRO ILE THR SER VAL LYS SEQRES 2 A 533 VAL VAL THR ASP LYS CYS THR TYR LYS ASP ASN GLU LEU SEQRES 3 A 533 LEU THR LYS TYR SER TYR GLU ASN ALA VAL VAL THR LYS SEQRES 4 A 533 THR ALA SER GLY ARG PHE ASP VAL THR PRO THR VAL GLN SEQRES 5 A 533 ASP TYR VAL PHE LYS LEU ASP LEU LYS LYS PRO GLU LYS SEQRES 6 A 533 LEU GLY ILE MET LEU ILE GLY LEU GLY GLY ASN ASN GLY SEQRES 7 A 533 SER THR LEU VAL ALA SER VAL LEU ALA ASN LYS HIS ASN SEQRES 8 A 533 VAL GLU PHE GLN THR LYS GLU GLY VAL LYS GLN PRO ASN SEQRES 9 A 533 TYR PHE GLY SER MET THR GLN CYS SER THR LEU LYS LEU SEQRES 10 A 533 GLY ILE ASP ALA GLU GLY ASN ASP VAL TYR ALA PRO PHE SEQRES 11 A 533 ASN SER LEU LEU PRO MET VAL SER PRO ASN ASP PHE VAL SEQRES 12 A 533 VAL SER GLY TRP ASP ILE ASN ASN ALA ASP LEU TYR GLU SEQRES 13 A 533 ALA MET GLN ARG SER GLN VAL LEU GLU TYR ASP LEU GLN SEQRES 14 A 533 GLN ARG LEU LYS ALA LYS MET SER LEU VAL LYS PRO LEU SEQRES 15 A 533 PRO SER ILE TYR TYR PRO ASP PHE ILE ALA ALA ASN GLN SEQRES 16 A 533 ASP GLU ARG ALA ASN ASN CYS ILE ASN LEU ASP GLU LYS SEQRES 17 A 533 GLY ASN VAL THR THR ARG GLY LYS TRP THR HIS LEU GLN SEQRES 18 A 533 ARG ILE ARG ARG ASP ILE GLN ASN PHE LYS GLU GLU ASN SEQRES 19 A 533 ALA LEU ASP LYS VAL ILE VAL LEU TRP THR ALA ASN THR SEQRES 20 A 533 GLU ARG TYR VAL GLU VAL SER PRO GLY VAL ASN ASP THR SEQRES 21 A 533 MET GLU ASN LEU LEU GLN SER ILE LYS ASN ASP HIS GLU SEQRES 22 A 533 GLU ILE ALA PRO SER THR ILE PHE ALA ALA ALA SER ILE SEQRES 23 A 533 LEU GLU GLY VAL PRO TYR ILE ASN GLY SER PRO GLN ASN SEQRES 24 A 533 THR PHE VAL PRO GLY LEU VAL GLN LEU ALA GLU HIS GLU SEQRES 25 A 533 GLY THR PHE ILE ALA GLY ASP ASP LEU LYS SER GLY GLN SEQRES 26 A 533 THR LYS LEU LYS SER VAL LEU ALA GLN PHE LEU VAL ASP SEQRES 27 A 533 ALA GLY ILE LYS PRO VAL SER ILE ALA SER TYR ASN HIS SEQRES 28 A 533 LEU GLY ASN ASN ASP GLY TYR ASN LEU SER ALA PRO LYS SEQRES 29 A 533 GLN PHE ARG SER LYS GLU ILE SER LYS SER SER VAL ILE SEQRES 30 A 533 ASP ASP ILE ILE ALA SER ASN ASP ILE LEU TYR ASN ASP SEQRES 31 A 533 LYS LEU GLY LYS LYS VAL ASP HIS CYS ILE VAL ILE LYS SEQRES 32 A 533 TYR MET LYS PRO VAL GLY ASP SER LYS VAL ALA MET ASP SEQRES 33 A 533 GLU TYR TYR SER GLU LEU MET LEU GLY GLY HIS ASN ARG SEQRES 34 A 533 ILE SER ILE HIS ASN VAL CYS GLU ASP SER LEU LEU ALA SEQRES 35 A 533 THR PRO LEU ILE ILE ASP LEU LEU VAL MET THR GLU PHE SEQRES 36 A 533 CYS THR ARG VAL SER TYR LYS LYS VAL ASP PRO VAL LYS SEQRES 37 A 533 GLU ASP ALA GLY LYS PHE GLU ASN PHE TYR PRO VAL LEU SEQRES 38 A 533 THR PHE LEU SER TYR TRP LEU LYS ALA PRO LEU THR ARG SEQRES 39 A 533 PRO GLY PHE HIS PRO VAL ASN GLY LEU ASN LYS GLN ARG SEQRES 40 A 533 THR ALA LEU GLU ASN PHE LEU ARG LEU LEU ILE GLY LEU SEQRES 41 A 533 PRO SER GLN ASN GLU LEU ARG PHE GLU GLU ARG LEU LEU SEQRES 1 B 533 MET THR GLU ASP ASN ILE ALA PRO ILE THR SER VAL LYS SEQRES 2 B 533 VAL VAL THR ASP LYS CYS THR TYR LYS ASP ASN GLU LEU SEQRES 3 B 533 LEU THR LYS TYR SER TYR GLU ASN ALA VAL VAL THR LYS SEQRES 4 B 533 THR ALA SER GLY ARG PHE ASP VAL THR PRO THR VAL GLN SEQRES 5 B 533 ASP TYR VAL PHE LYS LEU ASP LEU LYS LYS PRO GLU LYS SEQRES 6 B 533 LEU GLY ILE MET LEU ILE GLY LEU GLY GLY ASN ASN GLY SEQRES 7 B 533 SER THR LEU VAL ALA SER VAL LEU ALA ASN LYS HIS ASN SEQRES 8 B 533 VAL GLU PHE GLN THR LYS GLU GLY VAL LYS GLN PRO ASN SEQRES 9 B 533 TYR PHE GLY SER MET THR GLN CYS SER THR LEU LYS LEU SEQRES 10 B 533 GLY ILE ASP ALA GLU GLY ASN ASP VAL TYR ALA PRO PHE SEQRES 11 B 533 ASN SER LEU LEU PRO MET VAL SER PRO ASN ASP PHE VAL SEQRES 12 B 533 VAL SER GLY TRP ASP ILE ASN ASN ALA ASP LEU TYR GLU SEQRES 13 B 533 ALA MET GLN ARG SER GLN VAL LEU GLU TYR ASP LEU GLN SEQRES 14 B 533 GLN ARG LEU LYS ALA LYS MET SER LEU VAL LYS PRO LEU SEQRES 15 B 533 PRO SER ILE TYR TYR PRO ASP PHE ILE ALA ALA ASN GLN SEQRES 16 B 533 ASP GLU ARG ALA ASN ASN CYS ILE ASN LEU ASP GLU LYS SEQRES 17 B 533 GLY ASN VAL THR THR ARG GLY LYS TRP THR HIS LEU GLN SEQRES 18 B 533 ARG ILE ARG ARG ASP ILE GLN ASN PHE LYS GLU GLU ASN SEQRES 19 B 533 ALA LEU ASP LYS VAL ILE VAL LEU TRP THR ALA ASN THR SEQRES 20 B 533 GLU ARG TYR VAL GLU VAL SER PRO GLY VAL ASN ASP THR SEQRES 21 B 533 MET GLU ASN LEU LEU GLN SER ILE LYS ASN ASP HIS GLU SEQRES 22 B 533 GLU ILE ALA PRO SER THR ILE PHE ALA ALA ALA SER ILE SEQRES 23 B 533 LEU GLU GLY VAL PRO TYR ILE ASN GLY SER PRO GLN ASN SEQRES 24 B 533 THR PHE VAL PRO GLY LEU VAL GLN LEU ALA GLU HIS GLU SEQRES 25 B 533 GLY THR PHE ILE ALA GLY ASP ASP LEU LYS SER GLY GLN SEQRES 26 B 533 THR LYS LEU LYS SER VAL LEU ALA GLN PHE LEU VAL ASP SEQRES 27 B 533 ALA GLY ILE LYS PRO VAL SER ILE ALA SER TYR ASN HIS SEQRES 28 B 533 LEU GLY ASN ASN ASP GLY TYR ASN LEU SER ALA PRO LYS SEQRES 29 B 533 GLN PHE ARG SER LYS GLU ILE SER LYS SER SER VAL ILE SEQRES 30 B 533 ASP ASP ILE ILE ALA SER ASN ASP ILE LEU TYR ASN ASP SEQRES 31 B 533 LYS LEU GLY LYS LYS VAL ASP HIS CYS ILE VAL ILE LYS SEQRES 32 B 533 TYR MET LYS PRO VAL GLY ASP SER LYS VAL ALA MET ASP SEQRES 33 B 533 GLU TYR TYR SER GLU LEU MET LEU GLY GLY HIS ASN ARG SEQRES 34 B 533 ILE SER ILE HIS ASN VAL CYS GLU ASP SER LEU LEU ALA SEQRES 35 B 533 THR PRO LEU ILE ILE ASP LEU LEU VAL MET THR GLU PHE SEQRES 36 B 533 CYS THR ARG VAL SER TYR LYS LYS VAL ASP PRO VAL LYS SEQRES 37 B 533 GLU ASP ALA GLY LYS PHE GLU ASN PHE TYR PRO VAL LEU SEQRES 38 B 533 THR PHE LEU SER TYR TRP LEU LYS ALA PRO LEU THR ARG SEQRES 39 B 533 PRO GLY PHE HIS PRO VAL ASN GLY LEU ASN LYS GLN ARG SEQRES 40 B 533 THR ALA LEU GLU ASN PHE LEU ARG LEU LEU ILE GLY LEU SEQRES 41 B 533 PRO SER GLN ASN GLU LEU ARG PHE GLU GLU ARG LEU LEU HET MN A 630 1 HET D6P A1520 15 HET NAI A 650 44 HET NAI B 660 44 HETNAM MN MANGANESE (II) ION HETNAM D6P (3,4,5,7-TETRAHYDROXY-HEPT-1-ENYL)-PHOSPHONIC ACID HETNAM NAI 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE HETSYN D6P 2-DEOXY-D-GLUCITOL 6-(E)-VINYLHOMOPHOSPHONATE HETSYN NAI NADH FORMUL 3 MN MN 2+ FORMUL 4 D6P C7 H15 O7 P FORMUL 5 NAI 2(C21 H29 N7 O14 P2) FORMUL 7 HOH *372(H2 O) HELIX 1 1 GLY A 75 HIS A 90 1 16 HELIX 2 2 SER A 108 SER A 113 1 6 HELIX 3 3 SER A 138 ASN A 140 5 3 HELIX 4 4 ASP A 153 GLN A 162 1 10 HELIX 5 5 GLU A 165 LEU A 172 1 8 HELIX 6 6 LEU A 172 LEU A 178 1 7 HELIX 7 7 TYR A 187 ILE A 191 5 5 HELIX 8 8 ALA A 192 ASP A 196 5 5 HELIX 9 9 GLY A 215 ASN A 234 1 20 HELIX 10 10 THR A 260 ASN A 270 1 11 HELIX 11 11 ALA A 276 GLY A 289 1 14 HELIX 12 12 VAL A 302 GLY A 313 1 12 HELIX 13 13 GLY A 324 ALA A 339 1 16 HELIX 14 14 ASN A 354 LEU A 360 1 7 HELIX 15 15 ALA A 362 VAL A 376 1 15 HELIX 16 16 ILE A 377 SER A 383 1 7 HELIX 17 17 LYS A 406 GLY A 409 5 4 HELIX 18 18 MET A 423 GLY A 425 5 3 HELIX 19 19 ASP A 438 ARG A 458 1 21 HELIX 20 20 LEU A 481 LEU A 488 5 8 HELIX 21 21 GLY A 502 ILE A 518 1 17 HELIX 22 22 ARG A 527 LEU A 532 1 6 HELIX 23 23 GLY B 75 HIS B 90 1 16 HELIX 24 24 SER B 108 SER B 113 1 6 HELIX 25 25 ASN B 131 LEU B 133 5 3 HELIX 26 26 SER B 138 ASN B 140 5 3 HELIX 27 27 ASP B 153 GLN B 162 1 10 HELIX 28 28 GLU B 165 LEU B 178 1 14 HELIX 29 29 TYR B 187 ILE B 191 5 5 HELIX 30 30 GLY B 215 ALA B 235 1 21 HELIX 31 31 THR B 260 ASN B 270 1 11 HELIX 32 32 ALA B 276 GLU B 288 1 13 HELIX 33 33 VAL B 302 GLY B 313 1 12 HELIX 34 34 SER B 323 ALA B 339 1 17 HELIX 35 35 ASN B 354 SER B 361 1 8 HELIX 36 36 ALA B 362 ASN B 384 1 23 HELIX 37 37 LYS B 406 GLY B 409 5 4 HELIX 38 38 MET B 423 GLY B 425 5 3 HELIX 39 39 ASP B 438 ARG B 458 1 21 HELIX 40 40 LEU B 481 LEU B 488 5 8 HELIX 41 41 GLY B 502 ILE B 518 1 17 HELIX 42 42 ARG B 527 LEU B 532 1 6 SHEET 1 A 4 SER A 11 VAL A 14 0 SHEET 2 A 4 ARG B 44 ASP B 59 1 O PHE B 45 N LYS A 13 SHEET 3 A 4 GLU B 25 LYS B 39 -1 N VAL B 36 O THR B 48 SHEET 4 A 4 CYS B 19 TYR B 21 -1 N THR B 20 O LEU B 27 SHEET 1 B 4 SER A 11 VAL A 14 0 SHEET 2 B 4 ARG B 44 ASP B 59 1 O PHE B 45 N LYS A 13 SHEET 3 B 4 VAL B 459 VAL B 464 -1 O SER B 460 N LYS B 57 SHEET 4 B 4 GLU B 475 ASN B 476 -1 O GLU B 475 N TYR B 461 SHEET 1 C 5 CYS A 19 TYR A 21 0 SHEET 2 C 5 GLU A 25 LYS A 39 -1 O LEU A 27 N THR A 20 SHEET 3 C 5 ARG A 44 ASP A 59 -1 O THR A 48 N VAL A 36 SHEET 4 C 5 VAL A 459 VAL A 464 -1 O SER A 460 N LYS A 57 SHEET 5 C 5 GLU A 475 ASN A 476 -1 O GLU A 475 N TYR A 461 SHEET 1 D 4 CYS A 19 TYR A 21 0 SHEET 2 D 4 GLU A 25 LYS A 39 -1 O LEU A 27 N THR A 20 SHEET 3 D 4 ARG A 44 ASP A 59 -1 O THR A 48 N VAL A 36 SHEET 4 D 4 SER B 11 VAL B 14 1 O LYS B 13 N PHE A 45 SHEET 1 E 5 PHE A 142 TRP A 147 0 SHEET 2 E 5 LEU A 66 ILE A 71 1 N LEU A 70 O SER A 145 SHEET 3 E 5 VAL A 239 TRP A 243 1 O ILE A 240 N MET A 69 SHEET 4 E 5 TYR A 292 ASN A 294 1 O ILE A 293 N TRP A 243 SHEET 5 E 5 ILE A 316 GLY A 318 1 O ALA A 317 N ASN A 294 SHEET 1 F 2 THR A 114 ILE A 119 0 SHEET 2 F 2 ASP A 125 PRO A 129 -1 O VAL A 126 N GLY A 118 SHEET 1 G 8 ASP A 397 TYR A 404 0 SHEET 2 G 8 LYS A 342 LEU A 352 1 N ASN A 350 O LYS A 403 SHEET 3 G 8 SER A 411 GLU A 421 -1 O MET A 415 N TYR A 349 SHEET 4 G 8 HIS A 427 GLU A 437 -1 O ASN A 434 N ALA A 414 SHEET 5 G 8 HIS B 427 GLU B 437 -1 O HIS B 433 N SER A 431 SHEET 6 G 8 SER B 411 GLU B 421 -1 N TYR B 418 O ILE B 430 SHEET 7 G 8 LYS B 342 LEU B 352 -1 N TYR B 349 O MET B 415 SHEET 8 G 8 ASP B 397 TYR B 404 1 O LYS B 403 N ASN B 350 SHEET 1 H 5 PHE B 142 TRP B 147 0 SHEET 2 H 5 LEU B 66 ILE B 71 1 N ILE B 68 O SER B 145 SHEET 3 H 5 LYS B 238 TRP B 243 1 O LYS B 238 N GLY B 67 SHEET 4 H 5 TYR B 292 ASN B 294 1 O ILE B 293 N TRP B 243 SHEET 5 H 5 ILE B 316 GLY B 318 1 O ALA B 317 N ASN B 294 SHEET 1 I 2 PHE B 94 THR B 96 0 SHEET 2 I 2 GLY B 99 LYS B 101 -1 O LYS B 101 N PHE B 94 SHEET 1 J 2 THR B 114 ILE B 119 0 SHEET 2 J 2 ASP B 125 PRO B 129 -1 O ALA B 128 N LEU B 115 LINK OG SER A 439 MN MN A 630 1555 1555 2.51 LINK MN MN A 630 N7N NAI A 650 1555 1555 2.30 SITE 1 AC1 5 ASN A 76 ASN A 77 ASP A 410 SER A 439 SITE 2 AC1 5 NAI A 650 SITE 1 AC2 15 SER A 323 GLY A 324 GLN A 325 THR A 326 SITE 2 AC2 15 LYS A 327 LEU A 352 ASP A 356 LEU A 360 SITE 3 AC2 15 LYS A 369 LYS A 373 ILE A 402 LYS A 412 SITE 4 AC2 15 ASP A 438 LYS A 489 NAI A 650 SITE 1 AC3 34 ILE A 71 GLY A 72 GLY A 74 GLY A 75 SITE 2 AC3 34 ASN A 76 ASN A 77 ASP A 148 ILE A 149 SITE 3 AC3 34 SER A 184 ILE A 185 ARG A 198 THR A 244 SITE 4 AC3 34 ALA A 245 ASN A 246 THR A 247 GLY A 295 SITE 5 AC3 34 SER A 296 ASP A 320 LEU A 321 SER A 323 SITE 6 AC3 34 ASN A 355 ASP A 356 LYS A 369 ASP A 438 SITE 7 AC3 34 ALA A 442 MN A 630 HOH A 631 HOH A 662 SITE 8 AC3 34 HOH A 672 HOH A 687 HOH A 751 HOH A 770 SITE 9 AC3 34 HOH A 805 D6P A1520 SITE 1 AC4 34 ILE B 71 GLY B 72 GLY B 74 GLY B 75 SITE 2 AC4 34 ASN B 76 ASN B 77 ASP B 148 ILE B 149 SITE 3 AC4 34 SER B 184 ILE B 185 ARG B 198 THR B 244 SITE 4 AC4 34 ALA B 245 ASN B 246 THR B 247 GLY B 295 SITE 5 AC4 34 SER B 296 PRO B 297 ASP B 320 LEU B 321 SITE 6 AC4 34 SER B 323 ASN B 355 ASP B 356 LYS B 369 SITE 7 AC4 34 ASP B 438 ALA B 442 LYS B 489 HOH B 632 SITE 8 AC4 34 HOH B 664 HOH B 665 HOH B 686 HOH B 843 SITE 9 AC4 34 HOH B 908 HOH B 915 CRYST1 151.810 97.780 122.290 90.00 126.30 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006587 0.000000 0.004839 0.00000 SCALE2 0.000000 0.010227 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010146 0.00000