PDB Short entry for 1RP4 HEADER OXIDOREDUCTASE 03-DEC-03 1RP4 TITLE STRUCTURE OF ERO1P, SOURCE OF DISULFIDE BONDS FOR OXIDATIVE PROTEIN TITLE 2 FOLDING IN THE CELL COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL 65.0 KDA PROTEIN IN COX14-COS3 INTERGENIC COMPND 3 REGION PRECURSOR; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: ERO1P-C; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: YML130C, YM4987.05C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ORIGAMI(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-4T1 KEYWDS FLAVOENZYME, DISULFIDE BONDS, CXXCXXC, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR E.GROSS,D.B.KASTNER,C.A.KAISER,D.FASS REVDAT 3 31-JAN-18 1RP4 1 REMARK REVDAT 2 24-FEB-09 1RP4 1 VERSN REVDAT 1 08-JUN-04 1RP4 0 JRNL AUTH E.GROSS,D.B.KASTNER,C.A.KAISER,D.FASS JRNL TITL STRUCTURE OF ERO1P, SOURCE OF DISULFIDE BONDS FOR OXIDATIVE JRNL TITL 2 PROTEIN FOLDING IN THE CELL. JRNL REF CELL(CAMBRIDGE,MASS.) V. 117 601 2004 JRNL REFN ISSN 0092-8674 JRNL PMID 15163408 JRNL DOI 10.1016/S0092-8674(04)00418-0 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 25782 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1756 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.28 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3142 REMARK 3 BIN FREE R VALUE : 0.3194 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 44 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3003 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 102 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.472 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1RP4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-DEC-03. REMARK 100 THE DEPOSITION ID IS D_1000020923. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAR-03 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC MIRRORS REMARK 200 OPTICS : OSMIC MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25802 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.55400 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM ACETATE, CACODYLATE, CADMIUM REMARK 280 SULFATE, ETHANOL, METHANOL , PH 6.8, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 20K, TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.34000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.34000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 36.73500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 67.16500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 36.73500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 67.16500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 51.34000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 36.73500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 67.16500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 51.34000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 36.73500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 67.16500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 39 REMARK 465 SER A 40 REMARK 465 HIS A 41 REMARK 465 HIS A 42 REMARK 465 HIS A 43 REMARK 465 HIS A 44 REMARK 465 HIS A 45 REMARK 465 HIS A 46 REMARK 465 SER A 47 REMARK 465 SER A 48 REMARK 465 GLY A 49 REMARK 465 LEU A 50 REMARK 465 VAL A 51 REMARK 465 PRO A 52 REMARK 465 ARG A 53 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 153 OG REMARK 470 LYS A 154 CG CD CE NZ REMARK 470 LYS A 155 CG CD CE NZ REMARK 470 PRO A 156 CG CD REMARK 470 VAL A 157 CG1 CG2 REMARK 470 ASP A 158 CG OD1 OD2 REMARK 470 ILE A 159 CG1 CG2 CD1 REMARK 470 GLU A 160 CG CD OE1 OE2 REMARK 470 ASP A 161 CG OD1 OD2 REMARK 470 THR A 162 OG1 CG2 REMARK 470 ILE A 163 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 91 17.88 -61.68 REMARK 500 PHE A 92 -98.19 -129.55 REMARK 500 ASN A 96 -90.64 -54.21 REMARK 500 ASP A 97 -127.43 -78.53 REMARK 500 VAL A 109 -102.22 14.62 REMARK 500 VAL A 110 108.35 -48.84 REMARK 500 GLU A 111 -65.08 -4.73 REMARK 500 ASP A 131 21.10 -59.92 REMARK 500 GLN A 151 98.05 -47.70 REMARK 500 THR A 152 80.01 3.19 REMARK 500 VAL A 157 -119.63 19.32 REMARK 500 ASP A 158 49.90 72.21 REMARK 500 GLU A 160 -159.03 -150.52 REMARK 500 ASP A 161 -109.34 45.06 REMARK 500 THR A 162 159.47 170.56 REMARK 500 ASN A 175 69.92 -176.02 REMARK 500 THR A 214 -79.03 -50.29 REMARK 500 GLU A 241 73.42 -101.51 REMARK 500 THR A 245 4.07 -59.44 REMARK 500 ILE A 261 -63.54 -137.99 REMARK 500 ASN A 377 -71.83 -50.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 801 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 386 ND1 REMARK 620 2 HOH A 832 O 91.5 REMARK 620 3 GLU A 64 OE1 86.7 92.3 REMARK 620 4 GLU A 64 OE2 135.4 99.1 50.0 REMARK 620 5 GLU A 411 OE2 83.2 116.0 150.1 127.9 REMARK 620 6 GLU A 411 OE1 101.9 160.9 101.9 80.9 53.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 802 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 408 OE2 REMARK 620 2 HOH A 886 O 103.6 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NEN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 634 DBREF 1RP4 A 56 424 UNP Q03103 ERO1_YEAST 56 424 SEQADV 1RP4 GLY A 39 UNP Q03103 CLONING ARTIFACT SEQADV 1RP4 SER A 40 UNP Q03103 CLONING ARTIFACT SEQADV 1RP4 HIS A 41 UNP Q03103 EXPRESSION TAG SEQADV 1RP4 HIS A 42 UNP Q03103 EXPRESSION TAG SEQADV 1RP4 HIS A 43 UNP Q03103 EXPRESSION TAG SEQADV 1RP4 HIS A 44 UNP Q03103 EXPRESSION TAG SEQADV 1RP4 HIS A 45 UNP Q03103 EXPRESSION TAG SEQADV 1RP4 HIS A 46 UNP Q03103 EXPRESSION TAG SEQADV 1RP4 SER A 47 UNP Q03103 CLONING ARTIFACT SEQADV 1RP4 SER A 48 UNP Q03103 CLONING ARTIFACT SEQADV 1RP4 GLY A 49 UNP Q03103 CLONING ARTIFACT SEQADV 1RP4 LEU A 50 UNP Q03103 CLONING ARTIFACT SEQADV 1RP4 VAL A 51 UNP Q03103 CLONING ARTIFACT SEQADV 1RP4 PRO A 52 UNP Q03103 CLONING ARTIFACT SEQADV 1RP4 ARG A 53 UNP Q03103 CLONING ARTIFACT SEQADV 1RP4 GLY A 54 UNP Q03103 CLONING ARTIFACT SEQADV 1RP4 SER A 55 UNP Q03103 CLONING ARTIFACT SEQADV 1RP4 MSE A 133 UNP Q03103 MET 133 MODIFIED RESIDUE SEQADV 1RP4 MSE A 258 UNP Q03103 MET 258 MODIFIED RESIDUE SEQADV 1RP4 MSE A 271 UNP Q03103 MET 271 MODIFIED RESIDUE SEQADV 1RP4 MSE A 306 UNP Q03103 MET 306 MODIFIED RESIDUE SEQADV 1RP4 MSE A 347 UNP Q03103 MET 347 MODIFIED RESIDUE SEQADV 1RP4 MSE A 415 UNP Q03103 MET 415 MODIFIED RESIDUE SEQADV 1RP4 MSE A 419 UNP Q03103 MET 419 MODIFIED RESIDUE SEQADV 1RP4 LEU A 425 UNP Q03103 CLONING ARTIFACT SEQADV 1RP4 GLU A 426 UNP Q03103 CLONING ARTIFACT SEQADV 1RP4 ARG A 427 UNP Q03103 CLONING ARTIFACT SEQRES 1 A 389 GLY SER HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL SEQRES 2 A 389 PRO ARG GLY SER PHE ASN GLU LEU ASN ALA ILE ASN GLU SEQRES 3 A 389 ASN ILE ARG ASP ASP LEU SER ALA LEU LEU LYS SER ASP SEQRES 4 A 389 PHE PHE LYS TYR PHE ARG LEU ASP LEU TYR LYS GLN CYS SEQRES 5 A 389 SER PHE TRP ASP ALA ASN ASP GLY LEU CYS LEU ASN ARG SEQRES 6 A 389 ALA CYS SER VAL ASP VAL VAL GLU ASP TRP ASP THR LEU SEQRES 7 A 389 PRO GLU TYR TRP GLN PRO GLU ILE LEU GLY SER PHE ASN SEQRES 8 A 389 ASN ASP THR MSE LYS GLU ALA ASP ASP SER ASP ASP GLU SEQRES 9 A 389 CYS LYS PHE LEU ASP GLN LEU CYS GLN THR SER LYS LYS SEQRES 10 A 389 PRO VAL ASP ILE GLU ASP THR ILE ASN TYR CYS ASP VAL SEQRES 11 A 389 ASN ASP PHE ASN GLY LYS ASN ALA VAL LEU ILE ASP LEU SEQRES 12 A 389 THR ALA ASN PRO GLU ARG PHE THR GLY TYR GLY GLY LYS SEQRES 13 A 389 GLN ALA GLY GLN ILE TRP SER THR ILE TYR GLN ASP ASN SEQRES 14 A 389 CYS PHE THR ILE GLY GLU THR GLY GLU SER LEU ALA LYS SEQRES 15 A 389 ASP ALA PHE TYR ARG LEU VAL SER GLY PHE HIS ALA SER SEQRES 16 A 389 ILE GLY THR HIS LEU SER LYS GLU TYR LEU ASN THR LYS SEQRES 17 A 389 THR GLY LYS TRP GLU PRO ASN LEU ASP LEU PHE MSE ALA SEQRES 18 A 389 ARG ILE GLY ASN PHE PRO ASP ARG VAL THR ASN MSE TYR SEQRES 19 A 389 PHE ASN TYR ALA VAL VAL ALA LYS ALA LEU TRP LYS ILE SEQRES 20 A 389 GLN PRO TYR LEU PRO GLU PHE SER PHE CYS ASP LEU VAL SEQRES 21 A 389 ASN LYS GLU ILE LYS ASN LYS MSE ASP ASN VAL ILE SER SEQRES 22 A 389 GLN LEU ASP THR LYS ILE PHE ASN GLU ASP LEU VAL PHE SEQRES 23 A 389 ALA ASN ASP LEU SER LEU THR LEU LYS ASP GLU PHE ARG SEQRES 24 A 389 SER ARG PHE LYS ASN VAL THR LYS ILE MSE ASP CYS VAL SEQRES 25 A 389 GLN CYS ASP ARG CYS ARG LEU TRP GLY LYS ILE GLN THR SEQRES 26 A 389 THR GLY TYR ALA THR ALA LEU LYS ILE LEU PHE GLU ILE SEQRES 27 A 389 ASN ASP ALA ASP GLU PHE THR LYS GLN HIS ILE VAL GLY SEQRES 28 A 389 LYS LEU THR LYS TYR GLU LEU ILE ALA LEU LEU GLN THR SEQRES 29 A 389 PHE GLY ARG LEU SER GLU SER ILE GLU SER VAL ASN MSE SEQRES 30 A 389 PHE GLU LYS MSE TYR GLY LYS ARG LEU LEU GLU ARG MODRES 1RP4 MSE A 133 MET SELENOMETHIONINE MODRES 1RP4 MSE A 258 MET SELENOMETHIONINE MODRES 1RP4 MSE A 271 MET SELENOMETHIONINE MODRES 1RP4 MSE A 306 MET SELENOMETHIONINE MODRES 1RP4 MSE A 347 MET SELENOMETHIONINE MODRES 1RP4 MSE A 415 MET SELENOMETHIONINE MODRES 1RP4 MSE A 419 MET SELENOMETHIONINE HET MSE A 133 8 HET MSE A 258 8 HET MSE A 271 8 HET MSE A 306 8 HET MSE A 347 8 HET MSE A 415 8 HET MSE A 419 8 HET CD A 801 1 HET CD A 802 1 HET NEN A 501 9 HET FAD A 634 53 HETNAM MSE SELENOMETHIONINE HETNAM CD CADMIUM ION HETNAM NEN 1-ETHYL-PYRROLIDINE-2,5-DIONE HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 2 CD 2(CD 2+) FORMUL 4 NEN C6 H9 N O2 FORMUL 5 FAD C27 H33 N9 O15 P2 FORMUL 6 HOH *102(H2 O) HELIX 1 1 GLY A 54 LYS A 75 1 22 HELIX 2 2 ASP A 112 LEU A 116 5 5 HELIX 3 3 PRO A 117 TRP A 120 5 4 HELIX 4 4 GLN A 121 GLY A 126 1 6 HELIX 5 5 ASP A 140 LYS A 144 5 5 HELIX 6 6 ASN A 164 ASN A 169 1 6 HELIX 7 7 GLY A 192 ASP A 206 1 15 HELIX 8 8 GLY A 215 GLU A 241 1 27 HELIX 9 9 ASN A 253 ILE A 261 1 9 HELIX 10 10 PHE A 264 GLN A 286 1 23 HELIX 11 11 PRO A 287 LEU A 289 5 3 HELIX 12 12 GLU A 301 GLN A 312 1 12 HELIX 13 13 LEU A 313 ASP A 314 5 2 HELIX 14 14 THR A 315 GLU A 320 5 6 HELIX 15 15 SER A 329 ILE A 346 1 18 HELIX 16 16 MSE A 347 VAL A 350 5 4 HELIX 17 17 CYS A 352 ASP A 378 1 27 HELIX 18 18 ASP A 380 LYS A 390 1 11 HELIX 19 19 THR A 392 ARG A 427 1 36 SHEET 1 A 3 TYR A 81 ASP A 85 0 SHEET 2 A 3 ALA A 176 ASP A 180 -1 O VAL A 177 N LEU A 84 SHEET 3 A 3 LYS A 134 GLU A 135 -1 N LYS A 134 O LEU A 178 SHEET 1 B 2 TYR A 242 LEU A 243 0 SHEET 2 B 2 TRP A 250 GLU A 251 -1 O GLU A 251 N TYR A 242 SSBOND 1 CYS A 90 CYS A 349 1555 1555 2.04 SSBOND 2 CYS A 100 CYS A 105 1555 1555 2.03 SSBOND 3 CYS A 143 CYS A 166 1555 1555 2.03 SSBOND 4 CYS A 150 CYS A 295 1555 1555 2.04 SSBOND 5 CYS A 352 CYS A 355 1555 1555 2.06 LINK SG CYS A 208 C1 NEN A 501 1555 1555 1.82 LINK C THR A 132 N MSE A 133 1555 1555 1.33 LINK C MSE A 133 N LYS A 134 1555 1555 1.33 LINK C PHE A 257 N MSE A 258 1555 1555 1.33 LINK C MSE A 258 N ALA A 259 1555 1555 1.33 LINK C ASN A 270 N MSE A 271 1555 1555 1.33 LINK C MSE A 271 N TYR A 272 1555 1555 1.33 LINK C LYS A 305 N MSE A 306 1555 1555 1.33 LINK C MSE A 306 N ASP A 307 1555 1555 1.33 LINK C ILE A 346 N MSE A 347 1555 1555 1.32 LINK C MSE A 347 N ASP A 348 1555 1555 1.33 LINK C ASN A 414 N MSE A 415 1555 1555 1.33 LINK C MSE A 415 N PHE A 416 1555 1555 1.33 LINK C LYS A 418 N MSE A 419 1555 1555 1.33 LINK C MSE A 419 N TYR A 420 1555 1555 1.33 LINK CD CD A 801 ND1 HIS A 386 1555 1555 2.30 LINK CD CD A 801 O HOH A 832 1555 1555 2.74 LINK CD CD A 802 OE2 GLU A 408 1555 1555 2.75 LINK CD CD A 802 O HOH A 886 1555 1555 2.99 LINK CD CD A 801 OE1 GLU A 64 1555 8455 2.21 LINK CD CD A 801 OE2 GLU A 64 1555 8455 2.79 LINK CD CD A 801 OE2 GLU A 411 1555 8455 2.20 LINK CD CD A 801 OE1 GLU A 411 1555 8455 2.67 SITE 1 AC1 4 GLU A 64 HIS A 386 GLU A 411 HOH A 832 SITE 1 AC2 4 LYS A 240 GLU A 241 GLU A 408 HOH A 886 SITE 1 AC3 3 CYS A 208 ARG A 423 LEU A 424 SITE 1 AC4 27 VAL A 107 GLU A 186 ARG A 187 PHE A 188 SITE 2 AC4 27 THR A 189 TYR A 191 ALA A 196 ILE A 199 SITE 3 AC4 27 TRP A 200 TYR A 204 TYR A 224 SER A 228 SITE 4 AC4 27 HIS A 231 ALA A 232 ILE A 234 LEU A 238 SITE 5 AC4 27 ARG A 260 ARG A 267 MSE A 347 CYS A 355 SITE 6 AC4 27 HOH A 805 HOH A 810 HOH A 819 HOH A 844 SITE 7 AC4 27 HOH A 848 HOH A 849 HOH A 881 CRYST1 73.470 134.330 102.680 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013611 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007444 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009739 0.00000