PDB Short entry for 1RQY HEADER DNA 07-DEC-03 1RQY TITLE 9-AMINO-[N-(2-DIMETHYLAMINO)PROPLY]-ACRIDINE-4-CARBOXAMIDE BOUND TO TITLE 2 D(CGTACG)2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(CP*GP*TP*AP*CP*G)-3'; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES KEYWDS B-DNA, CYTOSINE EXCHANGE, QUADRUPLEX, ACRIDINE, UNUSUAL KEYWDS 2 INTERCALATION, DNA EXPDTA X-RAY DIFFRACTION AUTHOR A.ADAMS,J.M.GUSS,W.A.DENNY,L.P.WAKELIN REVDAT 3 23-AUG-23 1RQY 1 REMARK LINK REVDAT 2 24-FEB-09 1RQY 1 VERSN REVDAT 1 11-MAY-04 1RQY 0 JRNL AUTH A.ADAMS,J.M.GUSS,W.A.DENNY,L.P.WAKELIN JRNL TITL STRUCTURE OF JRNL TITL 2 9-AMINO-[N-(2-DIMETHYLAMINO)PROPYL]ACRIDINE-4-CARBOXAMIDE JRNL TITL 3 BOUND TO D(CGTACG)(2): A COMPARISON OF STRUCTURES OF JRNL TITL 4 D(CGTACG)(2) COMPLEXED WITH INTERCALATORSIN THE PRESENCE OF JRNL TITL 5 COBALT. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 60 823 2004 JRNL REFN ISSN 0907-4449 JRNL PMID 15103127 JRNL DOI 10.1107/S0907444904003907 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 CROSS-VALIDATION METHOD : FREE R REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.229 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.227 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 7.900 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 362 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 4608 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : 0.222 REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.219 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 7.800 REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 324 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 4147 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 224 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 30 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 269.25 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 0.00 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 3 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 1235 REMARK 3 NUMBER OF RESTRAINTS : 2833 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 ANGLE DISTANCES (A) : 0.017 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.030 REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.009 REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.000 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.008 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.009 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : 0.000 REMARK 3 SIMILAR ADP COMPONENTS (A**2) : 0.088 REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : 0.000 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH AND HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ANISOTROPIC SCALING APPLIED BY THE REMARK 3 METHOD OF PARKIN, MOEZZI & HOPE, J.APPL.CRYST.28(1995)53-56 REMARK 4 REMARK 4 1RQY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-DEC-03. REMARK 100 THE DEPOSITION ID IS D_1000020972. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAR-98 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC MIRRORS REMARK 200 OPTICS : FOCUSING MIRROR OPTICS REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4786 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.26000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: REFINEMENT REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: PDB ENTRY 1FN1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM CACODYLATE, MAGNESIUM ACETATE, REMARK 280 COBALT CHLORIDE, SPERMINE, MPD, PH 6.5, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 285K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y+1/2,-Z REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 14.37250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 26.06200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 14.37250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 26.06200 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 14.37250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 26.06200 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 14.37250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 26.06200 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CO CO B 901 LIES ON A SPECIAL POSITION. REMARK 375 MG MG B 903 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 905 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 926 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DC A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG A 1 O4' - C1' - N9 ANGL. DEV. = -5.3 DEGREES REMARK 500 DG A 1 C5 - C6 - O6 ANGL. DEV. = -3.7 DEGREES REMARK 500 DT A 2 OP1 - P - OP2 ANGL. DEV. = 9.4 DEGREES REMARK 500 DT A 2 O4' - C1' - N1 ANGL. DEV. = -6.5 DEGREES REMARK 500 DT A 2 C3' - O3' - P ANGL. DEV. = 11.7 DEGREES REMARK 500 DA A 3 O5' - C5' - C4' ANGL. DEV. = -5.0 DEGREES REMARK 500 DC A 4 OP1 - P - OP2 ANGL. DEV. = 10.2 DEGREES REMARK 500 DC A 4 O5' - C5' - C4' ANGL. DEV. = -8.8 DEGREES REMARK 500 DG A 5 OP1 - P - OP2 ANGL. DEV. = 9.9 DEGREES REMARK 500 DG A 5 O5' - C5' - C4' ANGL. DEV. = -7.0 DEGREES REMARK 500 DC B 1 N1 - C1' - C2' ANGL. DEV. = 9.0 DEGREES REMARK 500 DC B 1 O4' - C1' - N1 ANGL. DEV. = -5.5 DEGREES REMARK 500 DG B 2 O5' - C5' - C4' ANGL. DEV. = -7.0 DEGREES REMARK 500 DG B 2 O4' - C1' - N9 ANGL. DEV. = 2.8 DEGREES REMARK 500 DG B 2 N9 - C4 - C5 ANGL. DEV. = 2.4 DEGREES REMARK 500 DG B 2 N1 - C6 - O6 ANGL. DEV. = -5.3 DEGREES REMARK 500 DG B 2 C5 - C6 - O6 ANGL. DEV. = 5.0 DEGREES REMARK 500 DT B 3 OP1 - P - OP2 ANGL. DEV. = 13.3 DEGREES REMARK 500 DA B 4 OP1 - P - OP2 ANGL. DEV. = 9.4 DEGREES REMARK 500 DC B 5 OP1 - P - OP2 ANGL. DEV. = 14.2 DEGREES REMARK 500 DC B 5 C3' - C2' - C1' ANGL. DEV. = -4.9 DEGREES REMARK 500 DC B 5 N1 - C2 - O2 ANGL. DEV. = -3.8 DEGREES REMARK 500 DG B 6 N3 - C2 - N2 ANGL. DEV. = 4.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 7AD A 101 REMARK 610 7AD A 601 REMARK 610 7AD B 401 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 902 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG A 1 N7 REMARK 620 2 HOH A 909 O 86.4 REMARK 620 3 HOH A 920 O 88.5 88.4 REMARK 620 4 HOH A 921 O 93.0 174.6 96.9 REMARK 620 5 HOH A 922 O 176.1 89.7 91.0 90.9 REMARK 620 6 HOH A 923 O 86.5 90.6 174.9 84.1 94.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 903 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG B 2 OP2 REMARK 620 2 DG B 2 OP2 158.9 REMARK 620 3 DG B 2 OP2 100.5 100.3 REMARK 620 4 DG B 2 OP2 100.3 59.0 158.9 REMARK 620 5 HOH B 926 O 102.6 77.2 98.2 74.4 REMARK 620 6 HOH B 926 O 98.2 74.4 102.6 77.2 147.3 REMARK 620 7 HOH B 926 O 98.2 74.4 102.6 77.2 147.3 0.0 REMARK 620 8 HOH B 926 O 102.6 77.2 98.2 74.4 0.0 147.3 147.3 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 901 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG B 6 N7 REMARK 620 2 DG B 6 N7 179.6 REMARK 620 3 HOH B 911 O 89.3 90.4 REMARK 620 4 HOH B 911 O 90.4 89.3 74.4 REMARK 620 5 HOH B 915 O 91.6 88.6 84.2 158.5 REMARK 620 6 HOH B 915 O 88.5 91.7 158.5 84.2 117.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 904 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG B 6 OP1 REMARK 620 2 DG B 6 OP1 91.8 REMARK 620 3 HOH B4036 O 56.0 147.6 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 904 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 7AD A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 7AD B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 7AD A 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FN1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF 9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL) ACRIDINE-4- REMARK 900 CARBOXAMIDE BOUND TO D(CG(5BR)UACG)2 REMARK 900 RELATED ID: 1FN2 RELATED DB: PDB REMARK 900 9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL)ACRIDINE-4-CARBOXAMIDE BOUND TO REMARK 900 D(CGTACG)2 DBREF 1RQY A 0 5 PDB 1RQY 1RQY 0 5 DBREF 1RQY B 1 6 PDB 1RQY 1RQY 1 6 SEQRES 1 A 6 DC DG DT DA DC DG SEQRES 1 B 6 DC DG DT DA DC DG HET CO A 902 1 HET 7AD A 101 15 HET 7AD A 601 15 HET CO B 901 1 HET MG B 903 1 HET MG B 904 1 HET 7AD B 401 15 HETNAM CO COBALT (II) ION HETNAM 7AD 9-AMINO-N-[3-(DIMETHYLAMINO)PROPYL]ACRIDINE-4- HETNAM 2 7AD CARBOXAMIDE HETNAM MG MAGNESIUM ION FORMUL 3 CO 2(CO 2+) FORMUL 4 7AD 3(C19 H22 N4 O) FORMUL 7 MG 2(MG 2+) FORMUL 10 HOH *30(H2 O) LINK N7 DG A 1 CO CO A 902 1555 1555 2.19 LINK CO CO A 902 O HOH A 909 1555 1555 2.22 LINK CO CO A 902 O HOH A 920 1555 1555 2.13 LINK CO CO A 902 O HOH A 921 1555 1555 2.16 LINK CO CO A 902 O HOH A 922 1555 1555 2.14 LINK CO CO A 902 O HOH A 923 1555 1555 2.10 LINK OP2 DG B 2 MG MG B 903 1555 1555 1.74 LINK OP2 DG B 2 MG MG B 903 2665 1555 2.71 LINK OP2 DG B 2 MG MG B 903 4565 1555 1.74 LINK OP2 DG B 2 MG MG B 903 3655 1555 2.71 LINK N7 DG B 6 CO CO B 901 1555 1555 2.12 LINK N7 DG B 6 CO CO B 901 3756 1555 2.12 LINK OP1 DG B 6 MG MG B 904 1555 1555 2.39 LINK OP1 DG B 6 MG MG B 904 6655 1555 2.28 LINK CO CO B 901 O HOH B 911 1555 1555 2.27 LINK CO CO B 901 O HOH B 911 1555 3756 2.27 LINK CO CO B 901 O HOH B 915 1555 1555 1.93 LINK CO CO B 901 O HOH B 915 1555 3756 1.93 LINK MG MG B 903 O HOH B 926 1555 1555 2.22 LINK MG MG B 903 O HOH B 926 1555 3655 2.22 LINK MG MG B 903 O HOH B 926 1555 4565 2.22 LINK MG MG B 903 O HOH B 926 1555 2665 2.22 LINK MG MG B 904 O HOH B4036 1555 3756 3.15 SITE 1 AC1 3 DG B 6 HOH B 911 HOH B 915 SITE 1 AC2 6 DG A 1 HOH A 909 HOH A 920 HOH A 921 SITE 2 AC2 6 HOH A 922 HOH A 923 SITE 1 AC3 2 DG B 2 HOH B 926 SITE 1 AC4 2 DC B 5 DG B 6 SITE 1 AC5 4 DC A 4 DG A 5 DC B 1 DG B 2 SITE 1 AC6 5 DC A 4 DG A 5 DC B 1 DG B 2 SITE 2 AC6 5 HOH B 926 SITE 1 AC7 4 DC A 4 DG A 5 DC B 1 DG B 2 CRYST1 28.745 52.124 40.745 90.00 90.00 90.00 C 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.034789 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019185 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024543 0.00000