PDB Short entry for 1RRZ HEADER STRUCTURAL GENOMICS,BIOSYNTHETIC PROTEIN09-DEC-03 1RRZ TITLE SOLUTION STRUCTURE OF GLGS PROTEIN FROM E. COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOGEN SYNTHESIS PROTEIN GLGS; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: GLGS, B3049; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS ALL-HELICAL DOMAIN, STRUCTURAL GENOMICS, MONTREAL-KINGSTON BACTERIAL KEYWDS 2 STRUCTURAL GENOMICS INITIATIVE, BSGI, BIOSYNTHETIC PROTEIN EXPDTA SOLUTION NMR NUMMDL 15 AUTHOR G.KOZLOV,K.GEHRING,MONTREAL-KINGSTON BACTERIAL STRUCTURAL GENOMICS AUTHOR 2 INITIATIVE (BSGI) REVDAT 3 02-MAR-22 1RRZ 1 REMARK SEQADV REVDAT 2 24-FEB-09 1RRZ 1 VERSN REVDAT 1 01-JUN-04 1RRZ 0 JRNL AUTH G.KOZLOV,D.ELIAS,M.CYGLER,K.GEHRING JRNL TITL STRUCTURE OF GLGS FROM ESCHERICHIA COLI SUGGESTS A ROLE IN JRNL TITL 2 PROTEIN-PROTEIN INTERACTIONS. JRNL REF BMC BIOL. V. 2 10 2004 JRNL REFN ESSN 1741-7007 JRNL PMID 15161493 JRNL DOI 10.1186/1741-7007-2-10 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 2.1, XPLOR-NIH 2.9.2 REMARK 3 AUTHORS : BRUKER BIOSPIN (XWINNMR), CLORE (XPLOR-NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THE STRUCTURES ARE BASED ON A TOTAL OF 449 RESTRAINTS, 311 ARE NOE- REMARK 3 DERIVED REMARK 3 DISTANCE CONSTRAINTS, 109 TALOS-DERIVED DIHEDRAL ANGLE RESTRAINTS, REMARK 3 29 DISTANCE RESTRAINTS REMARK 3 FROM HYDROGEN BONDS. REMARK 4 REMARK 4 1RRZ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-DEC-03. REMARK 100 THE DEPOSITION ID IS D_1000020999. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.7 REMARK 210 IONIC STRENGTH : 5MM POTASSIUM PHOSPHATE REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM GLGS U-15N; 5MM POTASSIUM REMARK 210 PHOSPHATE; 1MM DTT; 0.1MM SODIUM REMARK 210 AZIDE; 1MM GLGS; 5MM POTASSIUM REMARK 210 PHOSPHATE; 1MM DTT; 0.1MM SODIUM REMARK 210 AZIDE; 1MM GLGS; 5MM POTASSIUM REMARK 210 PHOSPHATE; 1MM DTT; 0.1MM SODIUM REMARK 210 AZIDE REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 2D NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.1, XEASY 1.3.13, CYANA REMARK 210 1.0.6 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD TRIPLE REMARK 210 -RESONANCE AND HOMONUCLEAR TECHNIQUES. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-15 REMARK 465 RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 14 H PHE A 18 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 MET A 37 106.96 64.62 REMARK 500 1 GLU A 61 -59.25 -159.81 REMARK 500 1 GLU A 65 -64.11 -132.80 REMARK 500 2 ASP A 29 87.16 -68.69 REMARK 500 2 ASP A 38 -54.53 -145.33 REMARK 500 2 GLU A 61 -77.85 -76.36 REMARK 500 2 GLU A 63 72.34 57.53 REMARK 500 3 ASP A 29 86.74 -69.62 REMARK 500 3 MET A 37 97.48 61.59 REMARK 500 3 ARG A 60 -46.01 73.20 REMARK 500 3 GLU A 61 -80.87 -153.84 REMARK 500 3 LEU A 62 -74.91 60.29 REMARK 500 4 ASP A 38 -44.83 -139.13 REMARK 500 4 LEU A 62 -52.72 -126.08 REMARK 500 5 ASP A 2 65.74 -119.57 REMARK 500 5 HIS A 3 -167.35 -115.95 REMARK 500 5 ASP A 38 -43.17 -138.74 REMARK 500 5 ARG A 60 -70.94 -65.06 REMARK 500 5 GLU A 61 -84.65 59.58 REMARK 500 5 GLU A 65 -57.43 -126.71 REMARK 500 6 ASP A 2 -173.82 57.62 REMARK 500 6 HIS A 3 177.06 62.06 REMARK 500 6 GLU A 61 -55.46 -142.25 REMARK 500 6 GLU A 65 -51.21 -128.25 REMARK 500 7 ASP A 38 -54.46 -143.95 REMARK 500 7 GLU A 61 -50.45 -123.70 REMARK 500 7 GLU A 63 177.10 59.48 REMARK 500 7 GLU A 65 -75.38 -145.20 REMARK 500 8 ASP A 38 -51.12 -145.46 REMARK 500 8 GLU A 63 -165.97 57.76 REMARK 500 9 GLU A 61 -57.63 -157.43 REMARK 500 9 GLU A 65 -50.30 -150.85 REMARK 500 10 ASP A 2 41.64 -143.94 REMARK 500 10 ASP A 29 86.20 -69.09 REMARK 500 10 ASN A 36 54.88 -163.89 REMARK 500 10 MET A 37 49.84 -162.18 REMARK 500 10 ARG A 60 147.34 58.46 REMARK 500 11 ASP A 2 84.84 56.95 REMARK 500 11 HIS A 3 -178.42 -68.37 REMARK 500 11 MET A 37 91.44 59.37 REMARK 500 11 ARG A 60 71.57 43.79 REMARK 500 11 LEU A 62 151.02 66.04 REMARK 500 11 GLU A 65 98.86 63.69 REMARK 500 12 HIS A 3 150.95 70.07 REMARK 500 12 ASP A 38 -52.36 -150.33 REMARK 500 12 LEU A 62 -69.12 68.62 REMARK 500 13 ASP A 29 86.13 -68.57 REMARK 500 13 ASP A 38 -42.62 -140.60 REMARK 500 13 ARG A 60 89.27 -68.55 REMARK 500 13 GLU A 61 -50.48 -171.79 REMARK 500 REMARK 500 THIS ENTRY HAS 59 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 16 0.32 SIDE CHAIN REMARK 500 1 ARG A 20 0.32 SIDE CHAIN REMARK 500 1 ARG A 26 0.32 SIDE CHAIN REMARK 500 1 ARG A 42 0.32 SIDE CHAIN REMARK 500 1 ARG A 48 0.17 SIDE CHAIN REMARK 500 1 ARG A 60 0.32 SIDE CHAIN REMARK 500 2 ARG A 16 0.32 SIDE CHAIN REMARK 500 2 ARG A 20 0.24 SIDE CHAIN REMARK 500 2 ARG A 26 0.32 SIDE CHAIN REMARK 500 2 ARG A 42 0.32 SIDE CHAIN REMARK 500 2 ARG A 48 0.32 SIDE CHAIN REMARK 500 2 ARG A 60 0.30 SIDE CHAIN REMARK 500 3 ARG A 16 0.32 SIDE CHAIN REMARK 500 3 ARG A 20 0.32 SIDE CHAIN REMARK 500 3 ARG A 26 0.32 SIDE CHAIN REMARK 500 3 ARG A 42 0.32 SIDE CHAIN REMARK 500 3 ARG A 48 0.32 SIDE CHAIN REMARK 500 3 ARG A 60 0.32 SIDE CHAIN REMARK 500 4 ARG A 16 0.32 SIDE CHAIN REMARK 500 4 ARG A 20 0.31 SIDE CHAIN REMARK 500 4 ARG A 26 0.31 SIDE CHAIN REMARK 500 4 ARG A 42 0.31 SIDE CHAIN REMARK 500 4 ARG A 48 0.32 SIDE CHAIN REMARK 500 4 ARG A 60 0.32 SIDE CHAIN REMARK 500 5 ARG A 16 0.32 SIDE CHAIN REMARK 500 5 ARG A 20 0.32 SIDE CHAIN REMARK 500 5 ARG A 26 0.30 SIDE CHAIN REMARK 500 5 ARG A 42 0.32 SIDE CHAIN REMARK 500 5 ARG A 48 0.30 SIDE CHAIN REMARK 500 5 ARG A 60 0.32 SIDE CHAIN REMARK 500 6 ARG A 16 0.32 SIDE CHAIN REMARK 500 6 ARG A 20 0.31 SIDE CHAIN REMARK 500 6 ARG A 26 0.32 SIDE CHAIN REMARK 500 6 ARG A 42 0.32 SIDE CHAIN REMARK 500 6 ARG A 48 0.30 SIDE CHAIN REMARK 500 6 ARG A 60 0.32 SIDE CHAIN REMARK 500 7 ARG A 16 0.32 SIDE CHAIN REMARK 500 7 ARG A 20 0.32 SIDE CHAIN REMARK 500 7 ARG A 26 0.32 SIDE CHAIN REMARK 500 7 ARG A 42 0.32 SIDE CHAIN REMARK 500 7 ARG A 48 0.24 SIDE CHAIN REMARK 500 7 ARG A 60 0.32 SIDE CHAIN REMARK 500 8 ARG A 16 0.32 SIDE CHAIN REMARK 500 8 ARG A 20 0.32 SIDE CHAIN REMARK 500 8 ARG A 26 0.31 SIDE CHAIN REMARK 500 8 ARG A 42 0.30 SIDE CHAIN REMARK 500 8 ARG A 48 0.20 SIDE CHAIN REMARK 500 8 ARG A 60 0.31 SIDE CHAIN REMARK 500 9 ARG A 16 0.32 SIDE CHAIN REMARK 500 9 ARG A 20 0.31 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 90 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: GLGS_ECOLI RELATED DB: TARGETDB DBREF 1RRZ A 1 66 UNP P26649 GLGS_ECOLI 1 66 SEQADV 1RRZ MET A -19 UNP P26649 EXPRESSION TAG SEQADV 1RRZ GLY A -18 UNP P26649 EXPRESSION TAG SEQADV 1RRZ SER A -17 UNP P26649 EXPRESSION TAG SEQADV 1RRZ SER A -16 UNP P26649 EXPRESSION TAG SEQADV 1RRZ HIS A -15 UNP P26649 EXPRESSION TAG SEQADV 1RRZ HIS A -14 UNP P26649 EXPRESSION TAG SEQADV 1RRZ HIS A -13 UNP P26649 EXPRESSION TAG SEQADV 1RRZ HIS A -12 UNP P26649 EXPRESSION TAG SEQADV 1RRZ HIS A -11 UNP P26649 EXPRESSION TAG SEQADV 1RRZ HIS A -10 UNP P26649 EXPRESSION TAG SEQADV 1RRZ SER A -9 UNP P26649 EXPRESSION TAG SEQADV 1RRZ SER A -8 UNP P26649 EXPRESSION TAG SEQADV 1RRZ GLY A -7 UNP P26649 EXPRESSION TAG SEQADV 1RRZ LEU A -6 UNP P26649 EXPRESSION TAG SEQADV 1RRZ VAL A -5 UNP P26649 EXPRESSION TAG SEQADV 1RRZ PRO A -4 UNP P26649 EXPRESSION TAG SEQADV 1RRZ ARG A -3 UNP P26649 EXPRESSION TAG SEQADV 1RRZ GLY A -2 UNP P26649 EXPRESSION TAG SEQADV 1RRZ SER A -1 UNP P26649 EXPRESSION TAG SEQADV 1RRZ HIS A 0 UNP P26649 EXPRESSION TAG SEQRES 1 A 86 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 86 LEU VAL PRO ARG GLY SER HIS MET ASP HIS SER LEU ASN SEQRES 3 A 86 SER LEU ASN ASN PHE ASP PHE LEU ALA ARG SER PHE ALA SEQRES 4 A 86 ARG MET HIS ALA GLU GLY ARG PRO VAL ASP ILE LEU ALA SEQRES 5 A 86 VAL THR GLY ASN MET ASP GLU GLU HIS ARG THR TRP PHE SEQRES 6 A 86 CYS ALA ARG TYR ALA TRP TYR CYS GLN GLN MET MET GLN SEQRES 7 A 86 ALA ARG GLU LEU GLU LEU GLU HIS HELIX 1 1 ASN A 6 GLY A 25 1 20 HELIX 2 2 ASP A 29 MET A 37 1 9 HELIX 3 3 GLU A 40 ARG A 60 1 21 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000