PDB Short entry for 1RVL HEADER NUCLEOTIDYLTRANSFERASE 14-OCT-94 1RVL TITLE USING NEVIRAPINE ANALOGS AS STRUCTURAL PROBES TO MODEL TITLE 2 THEIR BINDING SITE ON HIV-1 REVERSE TRANSCRIPTASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66); COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.7.49; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HIV-I (BH10 ISOLATE); SOURCE 3 EXPRESSION_SYSTEM: ESCHERICHIA COLI KEYWDS NUCLEOTIDYLTRANSFERASE EXPDTA THEORETICAL MODEL AUTHOR N.PATTABIRAMAN,R.GUSSIO REVDAT 1 07-FEB-95 1RVL 0 JRNL AUTH R.GUSSIO,N.PATTABIRAMAN,D.W.ZAHAREVITZ,G.E.KELLOGG, JRNL AUTH 2 I.A.TOPOL,W.G.RICE,C.A.SCHAEFFER,J.W.ERICKSON, JRNL AUTH 3 S.K.BURT JRNL TITL ALL-ATOM MODELS FOR THE NON-NUCLEOSIDE BINDING JRNL TITL 2 SITE OF HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH JRNL TITL 3 INHIBITORS: A 3D QSAR APPROACH. JRNL REF J.MED.CHEM. V. 39 1645 1996 JRNL REFN ASTM JMCMAR US ISSN 0022-2623 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH N.PATTABIRAMAN,R.GUSSIO,I.TOPOL,S.K.BURT, REMARK 1 AUTH 2 J.W.ERICKSON REMARK 1 TITL AN ELECTRONIC CHARACTERIZATION OF A CONGENERIC REMARK 1 TITL 2 SERIES OF NEVIRAPINE ANALOGS REMARK 1 REF ABSTR.PAP.AM.CHEM.SOC., V. 208 1994 REMARK 1 REF 2 ABSTRACT NUMBER: MEDI 33 REMARK 1 REFN ASTM ACSRAL US ISSN 0065-7727 REMARK 1 REFERENCE 2 REMARK 1 AUTH R.GUSSIO,N.PATTABIRAMAN,G.E.KELLOGG,T.N.BHAT, REMARK 1 AUTH 2 J.COLLINS,S.K.BURT,J.W.ERICKSON REMARK 1 TITL HIV-1 REVERSE TRANSCRIPTASE NEVIRAPINE BINDING REMARK 1 TITL 2 SITE MODEL: A 3D STRUCTURAL QSAR FOR LIGAND DESIGN REMARK 1 REF ABSTR.PAP.AM.CHEM.SOC., V. 208 1994 REMARK 1 REF 2 ABSTRACT NUMBER: MEDI 34 REMARK 1 REFN ASTM ACSRAL US ISSN 0065-7727 REMARK 1 REFERENCE 3 REMARK 1 AUTH S.J.SMERDON,J.JAGER,J.WANG,L.A.KOHLSTAEDT, REMARK 1 AUTH 2 A.J.CHIRINO,J.M.FRIEDMAN,P.A.RICE,T.A.STEITZ REMARK 1 TITL STRUCTURE OF THE BINDING SITE FOR NONNUCLEOSIDE REMARK 1 TITL 2 INHIBITORS OF THE REVERSE TRANSCRIPTASE OF HUMAN REMARK 1 TITL 3 IMMUNODEFICIENCY VIRUS TYPE 1 REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 91 3911 1994 REMARK 1 REFN ASTM PNASA6 US ISSN 0027-8424 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1RVL COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 5 REMARK 5 THE COORDINATES FOR THE NON-NUCLEOSIDE BINDING SITE REMARK 5 MODEL WERE GENERATED USING THE COORDINATES OF C-ALPHA REMARK 5 ATOMS OF THE RT STRUCTURE DEPOSITED IN PDB (PDB ENTRY 1HVT) REMARK 5 AND THE STRUCTURE-ACTIVITY RELATIONSHIP DATA AVAILABLE REMARK 5 ON A CONGENERIC SERIES OF NEVIRAPINE ANALOGS. REMARK 5 REMARK 5 THE MODEL WAS BUILT USING FRAGMENTS FROM OTHER PDB REMARK 5 STRUCTURES USING MOLECULAR MECHANICS SOFTWARE. REMARK 5 REMARK 5 THE DOCKING OF THE LIGANDS WAS GUIDED BY THE TOTAL REMARK 5 INTERACTION CONSTANT CALCULATED USING THE PROGRAM HINT REMARK 5 (REF) AND THE COMPLEX WAS THEN MINIMIZED. FROM THE DOCKED REMARK 5 CONGENERIC SERIES THE AUTHORS DEVELOPED A 3D-QSAR REMARK 5 STATISTICAL MODEL FOR THE NON-NUCLEOSIDE BINDING SITE. REMARK 5 REMARK 5 THE AUTHORS WERE ABLE TO PREDICT THE IC'S OF THE REMARK 5 NON-NUCLEOSIDE COMPOUNDS TO 87% ACCURACY. THE AUTHORS ALSO REMARK 5 CALCULATED THE QUANTUM-ELECTRONIC PROFILE OF THESE REMARK 5 COMPOUNDS TO CORRELATE WITH THE BINDING OF THESE COMPOUNDS REMARK 5 TO RT. REMARK 5 REMARK 5 BASED ON THEIR 3D-QSAR MODEL, THE AUTHORS BUILT A NUMBER OF REMARK 5 RT-NON-NUCLEOSIDE COMPLEXES. THE COORDINATES OF EACH REMARK 5 COMPLEX ARE DEPOSITED SEPARATELY. REMARK 5 REMARK 5 ONLY THE COORDINATES FOR RESIDUES 92 - 110, 178 - 191, REMARK 5 227 - 236, AND 316 - 319 IN THE P66 AND 138 IN THE P51 REMARK 5 CHAINS ARE GIVEN. REMARK 5 REMARK 5 RESIDUE 191 OF CHAIN A IS MODELED AS GLY. REMARK 5 REMARK 5 GLY A 191, PRO A 236, TYR A 319, AND GLU B 138 ARE REMARK 5 BREAKS IN THE POLYPEPTIDE CHAIN. FOR THESE RESIDUES, ONLY, REMARK 5 THE COORDINATES FOR THE ATOMS C AND O ARE GIVEN. REMARK 6 REMARK 6 HET GROUP AAP IS ALPHA-(2,6-DICHLOROPHENYL)-ALPHA- REMARK 6 (2-ACETYL-5-METHYLANILINO)ACETAMIDE. REMARK 36 REMARK 36 TOPIC: STEREOCHEMISTRY REMARK 36 REMARK 36 SUBTOPIC: COVALENT BOND ANGLES (36.2) REMARK 36 REMARK 36 STANDARD TEXT: REMARK 36 REMARK 36 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 36 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 36 THAN 4*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 36 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 36 REMARK 36 STANDARD TABLE: REMARK 36 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(2X,A4,17X,F5.1) REMARK 36 REMARK 36 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 36 REMARK 36 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 36 REMARK 36 0 MET A 184 CG - SD - CE ANGL. DEV. = 44.2 DEGREES REMARK 36 0 ASP A 186 CB - CG - OD2 ANGL. DEV. = 46.3 DEGREES REMARK 36 REMARK 36 TOPIC: STEREOCHEMISTRY REMARK 36 REMARK 36 SUBTOPIC: CHIRAL CENTERS (36.3) REMARK 36 REMARK 36 STANDARD TEXT: REMARK 36 REMARK 36 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 36 CENTER(S) (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 36 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 36 REMARK 36 STANDARD TABLE: REMARK 36 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,A12) REMARK 36 REMARK 36 M RES CSSEQI REMARK 36 REMARK 36 0 THR A 107 SIDE-CHAIN REMARK 36 REMARK 36 TOPIC: STEREOCHEMISTRY REMARK 36 REMARK 36 SUBTOPIC: TORSION ANGLES (36.4) REMARK 36 REMARK 36 STANDARD TEXT: REMARK 36 REMARK 36 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 36 CENTER(S) (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 36 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 36 REMARK 36 STANDARD TABLE: REMARK 36 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 36 REMARK 36 M RES CSSEQI PSI PHI REMARK 36 REMARK 36 0 SER A 105 104.83 146.53 REMARK 36 0 LEU A 234 66.86 161.86 REMARK 36 0 HIS A 235 168.13 166.31 REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: NULL REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 1 REMARK 465 ILE A 2 REMARK 465 SER A 3 REMARK 465 PRO A 4 REMARK 465 ILE A 5 REMARK 465 GLU A 6 REMARK 465 THR A 7 REMARK 465 VAL A 8 REMARK 465 PRO A 9 REMARK 465 VAL A 10 REMARK 465 LYS A 11 REMARK 465 LEU A 12 REMARK 465 LYS A 13 REMARK 465 PRO A 14 REMARK 465 GLY A 15 REMARK 465 MET A 16 REMARK 465 ASP A 17 REMARK 465 GLY A 18 REMARK 465 PRO A 19 REMARK 465 LYS A 20 REMARK 465 VAL A 21 REMARK 465 LYS A 22 REMARK 465 GLN A 23 REMARK 465 TRP A 24 REMARK 465 PRO A 25 REMARK 465 LEU A 26 REMARK 465 THR A 27 REMARK 465 GLU A 28 REMARK 465 GLU A 29 REMARK 465 LYS A 30 REMARK 465 ILE A 31 REMARK 465 LYS A 32 REMARK 465 ALA A 33 REMARK 465 LEU A 34 REMARK 465 VAL A 35 REMARK 465 GLU A 36 REMARK 465 ILE A 37 REMARK 465 CYS A 38 REMARK 465 THR A 39 REMARK 465 GLU A 40 REMARK 465 MET A 41 REMARK 465 GLU A 42 REMARK 465 LYS A 43 REMARK 465 GLU A 44 REMARK 465 GLY A 45 REMARK 465 LYS A 46 REMARK 465 ILE A 47 REMARK 465 SER A 48 REMARK 465 LYS A 49 REMARK 465 ILE A 50 REMARK 465 GLY A 51 REMARK 465 PRO A 52 REMARK 465 GLU A 53 REMARK 465 ASN A 54 REMARK 465 PRO A 55 REMARK 465 TYR A 56 REMARK 465 ASN A 57 REMARK 465 THR A 58 REMARK 465 PRO A 59 REMARK 465 VAL A 60 REMARK 465 PHE A 61 REMARK 465 ALA A 62 REMARK 465 ILE A 63 REMARK 465 LYS A 64 REMARK 465 LYS A 65 REMARK 465 LYS A 66 REMARK 465 ASP A 67 REMARK 465 SER A 68 REMARK 465 THR A 69 REMARK 465 LYS A 70 REMARK 465 TRP A 71 REMARK 465 ARG A 72 REMARK 465 LYS A 73 REMARK 465 LEU A 74 REMARK 465 VAL A 75 REMARK 465 ASP A 76 REMARK 465 PHE A 77 REMARK 465 ARG A 78 REMARK 465 GLU A 79 REMARK 465 LEU A 80 REMARK 465 ASN A 81 REMARK 465 LYS A 82 REMARK 465 ARG A 83 REMARK 465 THR A 84 REMARK 465 GLN A 85 REMARK 465 ASP A 86 REMARK 465 PHE A 87 REMARK 465 TRP A 88 REMARK 465 GLU A 89 REMARK 465 VAL A 90 REMARK 465 GLN A 91 REMARK 465 VAL A 177 REMARK 465 PRO A 320 REMARK 465 GLY A 321 REMARK 465 ILE A 322 REMARK 465 ARG A 323 REMARK 465 TYR A 324 REMARK 465 GLN A 325 REMARK 465 TYR A 326 REMARK 465 ASN A 327 REMARK 465 VAL A 328 REMARK 465 LEU A 329 REMARK 465 PRO A 330 REMARK 465 GLN A 331 REMARK 465 GLY A 332 REMARK 465 TRP A 333 REMARK 465 LYS A 334 REMARK 465 GLY A 335 REMARK 465 SER A 336 REMARK 465 PRO A 337 REMARK 465 ALA A 338 REMARK 465 ILE A 339 REMARK 465 PHE A 340 REMARK 465 GLN A 341 REMARK 465 SER A 342 REMARK 465 SER A 343 REMARK 465 MET A 344 REMARK 465 THR A 345 REMARK 465 LYS A 346 REMARK 465 ILE A 347 REMARK 465 LEU A 348 REMARK 465 GLU A 349 REMARK 465 PRO A 350 REMARK 465 PHE A 351 REMARK 465 LYS A 352 REMARK 465 LYS A 353 REMARK 465 GLN A 354 REMARK 465 ASN A 355 REMARK 465 PRO A 356 REMARK 465 ASP A 357 REMARK 465 ILE A 358 REMARK 465 VAL A 359 REMARK 465 ILE A 360 REMARK 465 TYR A 361 REMARK 465 GLN A 362 REMARK 465 TYR A 363 REMARK 465 MET A 364 REMARK 465 ASP A 365 REMARK 465 ASP A 366 REMARK 465 LEU A 367 REMARK 465 TYR A 368 REMARK 465 VAL A 369 REMARK 465 GLY A 370 REMARK 465 SER A 371 REMARK 465 ASP A 372 REMARK 465 LEU A 373 REMARK 465 GLU A 374 REMARK 465 ILE A 375 REMARK 465 GLY A 376 REMARK 465 GLN A 377 REMARK 465 HIS A 378 REMARK 465 ARG A 379 REMARK 465 THR A 380 REMARK 465 LYS A 381 REMARK 465 ILE A 382 REMARK 465 GLU A 383 REMARK 465 GLU A 384 REMARK 465 LEU A 385 REMARK 465 ARG A 386 REMARK 465 GLN A 387 REMARK 465 HIS A 388 REMARK 465 LEU A 389 REMARK 465 LEU A 390 REMARK 465 ARG A 391 REMARK 465 TRP A 392 REMARK 465 GLY A 393 REMARK 465 LEU A 394 REMARK 465 THR A 395 REMARK 465 THR A 396 REMARK 465 PRO A 397 REMARK 465 ASP A 398 REMARK 465 LYS A 399 REMARK 465 LYS A 400 REMARK 465 HIS A 401 REMARK 465 GLN A 402 REMARK 465 LYS A 403 REMARK 465 GLU A 404 REMARK 465 PRO A 405 REMARK 465 PRO A 406 REMARK 465 PHE A 407 REMARK 465 LEU A 408 REMARK 465 TRP A 409 REMARK 465 MET A 410 REMARK 465 GLY A 411 REMARK 465 TYR A 412 REMARK 465 GLU A 413 REMARK 465 LEU A 414 REMARK 465 HIS A 415 REMARK 465 PRO A 416 REMARK 465 ASP A 417 REMARK 465 LYS A 418 REMARK 465 TRP A 419 REMARK 465 THR A 420 REMARK 465 VAL A 421 REMARK 465 GLN A 422 REMARK 465 PRO A 423 REMARK 465 ILE A 424 REMARK 465 VAL A 425 REMARK 465 LEU A 426 REMARK 465 PRO A 427 REMARK 465 GLU A 428 REMARK 465 LYS A 429 REMARK 465 ASP A 430 REMARK 465 SER A 431 REMARK 465 TRP A 432 REMARK 465 THR A 433 REMARK 465 VAL A 434 REMARK 465 ASN A 435 REMARK 465 ASP A 436 REMARK 465 ILE A 437 REMARK 465 GLN A 438 REMARK 465 LYS A 439 REMARK 465 LEU A 440 REMARK 465 VAL A 441 REMARK 465 GLY A 442 REMARK 465 LYS A 443 REMARK 465 LEU A 444 REMARK 465 ASN A 445 REMARK 465 TRP A 446 REMARK 465 ALA A 447 REMARK 465 SER A 448 REMARK 465 GLN A 449 REMARK 465 ILE A 450 REMARK 465 TYR A 451 REMARK 465 PRO A 452 REMARK 465 GLY A 453 REMARK 465 ILE A 454 REMARK 465 LYS A 455 REMARK 465 VAL A 456 REMARK 465 ARG A 457 REMARK 465 GLN A 458 REMARK 465 LEU A 459 REMARK 465 CYS A 460 REMARK 465 LYS A 461 REMARK 465 LEU A 462 REMARK 465 LEU A 463 REMARK 465 ARG A 464 REMARK 465 GLY A 465 REMARK 465 THR A 466 REMARK 465 LYS A 467 REMARK 465 ALA A 468 REMARK 465 LEU A 469 REMARK 465 THR A 470 REMARK 465 GLU A 471 REMARK 465 VAL A 472 REMARK 465 ILE A 473 REMARK 465 PRO A 474 REMARK 465 LEU A 475 REMARK 465 THR A 476 REMARK 465 GLU A 477 REMARK 465 GLU A 478 REMARK 465 ALA A 479 REMARK 465 GLU A 480 REMARK 465 LEU A 481 REMARK 465 GLU A 482 REMARK 465 LEU A 483 REMARK 465 ALA A 484 REMARK 465 GLU A 485 REMARK 465 ASN A 486 REMARK 465 ARG A 487 REMARK 465 GLU A 488 REMARK 465 ILE A 489 REMARK 465 LEU A 490 REMARK 465 LYS A 491 REMARK 465 GLU A 492 REMARK 465 PRO A 493 REMARK 465 VAL A 494 REMARK 465 HIS A 495 REMARK 465 GLY A 496 REMARK 465 VAL A 497 REMARK 465 TYR A 498 REMARK 465 TYR A 499 REMARK 465 ASP A 500 REMARK 465 PRO A 501 REMARK 465 SER A 502 REMARK 465 LYS A 503 REMARK 465 ASP A 504 REMARK 465 LEU A 505 REMARK 465 ILE A 506 REMARK 465 ALA A 507 REMARK 465 GLU A 508 REMARK 465 ILE A 509 REMARK 465 GLN A 510 REMARK 465 LYS A 511 REMARK 465 GLN A 512 REMARK 465 GLY A 513 REMARK 465 GLN A 514 REMARK 465 GLY A 515 REMARK 465 GLN A 516 REMARK 465 TRP A 517 REMARK 465 THR A 518 REMARK 465 TYR A 519 REMARK 465 GLN A 520 REMARK 465 ILE A 521 REMARK 465 TYR A 522 REMARK 465 GLN A 523 REMARK 465 GLU A 524 REMARK 465 PRO A 525 REMARK 465 PHE A 526 REMARK 465 LYS A 527 REMARK 465 ASN A 528 REMARK 465 LEU A 529 REMARK 465 LYS A 530 REMARK 465 THR A 531 REMARK 465 GLY A 532 REMARK 465 LYS A 533 REMARK 465 TYR A 534 REMARK 465 ALA A 535 REMARK 465 ARG A 536 REMARK 465 MET A 537 REMARK 465 ARG A 538 REMARK 465 GLY A 539 REMARK 465 ALA A 540 REMARK 465 HIS A 541 REMARK 465 THR A 542 REMARK 465 ASN A 543 REMARK 465 ASP A 544 REMARK 465 VAL A 545 REMARK 465 LYS A 546 REMARK 465 GLN A 547 REMARK 465 LEU A 548 REMARK 465 THR A 549 REMARK 465 GLU A 550 REMARK 465 ALA A 551 REMARK 465 VAL A 552 REMARK 465 GLN A 553 REMARK 465 LYS A 554 REMARK 465 ILE A 555 REMARK 465 THR A 556 REMARK 465 THR A 557 REMARK 465 GLU A 558 REMARK 465 SER A 559 REMARK 465 ILE A 560 REMARK 465 VAL A 561 REMARK 465 ILE A 562 REMARK 465 TRP A 563 REMARK 465 GLY A 564 REMARK 465 LYS A 565 REMARK 465 THR A 566 REMARK 465 PRO A 567 REMARK 465 LYS A 568 REMARK 465 PHE A 569 REMARK 465 LYS A 570 REMARK 465 LEU A 571 REMARK 465 PRO A 572 REMARK 465 ILE A 573 REMARK 465 GLN A 574 REMARK 465 LYS A 575 REMARK 465 GLU A 576 REMARK 465 THR A 577 REMARK 465 TRP A 578 REMARK 465 GLU A 579 REMARK 465 THR A 580 REMARK 465 TRP A 581 REMARK 465 TRP A 582 REMARK 465 THR A 583 REMARK 465 GLU A 584 REMARK 465 TYR A 585 REMARK 465 TRP A 586 REMARK 465 GLN A 587 REMARK 465 ALA A 588 REMARK 465 THR A 589 REMARK 465 TRP A 590 REMARK 465 ILE A 591 REMARK 465 PRO A 592 REMARK 465 GLU A 593 REMARK 465 TRP A 594 REMARK 465 GLU A 595 REMARK 465 PHE A 596 REMARK 465 VAL A 597 REMARK 465 ASN A 598 REMARK 465 THR A 599 REMARK 465 PRO A 600 REMARK 465 PRO A 601 REMARK 465 LEU A 602 REMARK 465 VAL A 603 REMARK 465 LYS A 604 REMARK 465 LEU A 605 REMARK 465 TRP A 606 REMARK 465 TYR A 607 REMARK 465 GLN A 608 REMARK 465 LEU A 609 REMARK 465 GLU A 610 REMARK 465 LYS A 611 REMARK 465 GLU A 612 REMARK 465 PRO A 613 REMARK 465 ILE A 614 REMARK 465 VAL A 615 REMARK 465 GLY A 616 REMARK 465 ALA A 617 REMARK 465 GLU A 618 REMARK 465 THR A 619 REMARK 465 PHE A 620 REMARK 465 TYR A 621 REMARK 465 VAL A 622 REMARK 465 ASP A 623 REMARK 465 GLY A 624 REMARK 465 ALA A 625 REMARK 465 ALA A 626 REMARK 465 ASN A 627 REMARK 465 ARG A 628 REMARK 465 GLU A 629 REMARK 465 THR A 630 REMARK 465 LYS A 631 REMARK 465 LEU A 632 REMARK 465 GLY A 633 REMARK 465 LYS A 634 REMARK 465 ALA A 635 REMARK 465 GLY A 636 REMARK 465 TYR A 637 REMARK 465 VAL A 638 REMARK 465 THR A 639 REMARK 465 ASN A 640 REMARK 465 LYS A 641 REMARK 465 GLY A 642 REMARK 465 ARG A 643 REMARK 465 GLN A 644 REMARK 465 LYS A 645 REMARK 465 VAL A 646 REMARK 465 VAL A 647 REMARK 465 PRO A 648 REMARK 465 LEU A 649 REMARK 465 THR A 650 REMARK 465 ASN A 651 REMARK 465 THR A 652 REMARK 465 THR A 653 REMARK 465 ASN A 654 REMARK 465 GLN A 655 REMARK 465 LYS A 656 REMARK 465 THR A 657 REMARK 465 GLU A 658 REMARK 465 LEU A 659 REMARK 465 GLN A 660 REMARK 465 ALA A 661 REMARK 465 ILE A 662 REMARK 465 TYR A 663 REMARK 465 LEU A 664 REMARK 465 ALA A 665 REMARK 465 LEU A 666 REMARK 465 GLN A 667 REMARK 465 ASP A 668 REMARK 465 SER A 669 REMARK 465 GLY A 670 REMARK 465 LEU A 671 REMARK 465 GLU A 672 REMARK 465 VAL A 673 REMARK 465 ASN A 674 REMARK 465 ILE A 675 REMARK 465 VAL A 676 REMARK 465 THR A 677 REMARK 465 ASP A 678 REMARK 465 SER A 679 REMARK 465 GLN A 680 REMARK 465 TYR A 681 REMARK 465 ALA A 682 REMARK 465 LEU A 683 REMARK 465 GLY A 684 REMARK 465 ILE A 685 REMARK 465 ILE A 686 REMARK 465 GLN A 687 REMARK 465 ALA A 688 REMARK 465 GLN A 689 REMARK 465 PRO A 690 REMARK 465 ASP A 691 REMARK 465 LYS A 692 REMARK 465 SER A 693 REMARK 465 GLU A 694 REMARK 465 SER A 695 REMARK 465 GLU A 696 REMARK 465 LEU A 697 REMARK 465 VAL A 698 REMARK 465 ASN A 699 REMARK 465 GLN A 700 REMARK 465 ILE A 701 REMARK 465 ILE A 702 REMARK 465 GLU A 703 REMARK 465 GLN A 704 REMARK 465 LEU A 705 REMARK 465 ILE A 706 REMARK 465 LYS A 707 REMARK 465 LYS A 708 REMARK 465 GLU A 709 REMARK 465 LYS A 710 REMARK 465 VAL A 711 REMARK 465 TYR A 712 REMARK 465 LEU A 713 REMARK 465 ALA A 714 REMARK 465 TRP A 715 REMARK 465 VAL A 716 REMARK 465 PRO A 717 REMARK 465 ALA A 718 REMARK 465 HIS A 719 REMARK 465 LYS A 720 REMARK 465 GLY A 721 REMARK 465 ILE A 722 REMARK 465 GLY A 723 REMARK 465 GLY A 724 REMARK 465 ASN A 725 REMARK 465 GLU A 726 REMARK 465 GLN A 727 REMARK 465 VAL A 728 REMARK 465 ASP A 729 REMARK 465 LYS A 730 REMARK 465 LEU A 731 REMARK 465 VAL A 732 REMARK 465 SER A 733 REMARK 465 ALA A 734 REMARK 465 GLY A 735 REMARK 465 ILE A 736 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 184 CG - SD - CE ANGL. DEV. = 44.2 DEGREES REMARK 500 ASP A 186 CB - CG - OD2 ANGL. DEV. = 46.3 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 105 146.53 104.82 REMARK 500 LEU A 234 161.86 66.86 DBREF 1RVL A 1 736 UNP P03366 POL_HV1B1 168 723 SEQADV 1RVL ILE A 178 UNP P03366 GLY 279 CONFLICT SEQADV 1RVL VAL A 179 UNP P03366 ASP 280 CONFLICT SEQADV 1RVL ILE A 180 UNP P03366 ALA 281 CONFLICT SEQADV 1RVL GLN A 182 UNP P03366 INSERTION SEQADV 1RVL TYR A 183 UNP P03366 PHE 283 CONFLICT SEQADV 1RVL MET A 184 UNP P03366 SER 284 CONFLICT SEQADV 1RVL ASP A 185 UNP P03366 VAL 285 CONFLICT SEQADV 1RVL ASP A 186 UNP P03366 PRO 286 CONFLICT SEQADV 1RVL TYR A 188 UNP P03366 INSERTION SEQADV 1RVL VAL A 189 UNP P03366 ASP 288 CONFLICT SEQADV 1RVL GLY A 190 UNP P03366 GLU 289 CONFLICT SEQADV 1RVL GLY A 191 UNP P03366 ASP 290 CONFLICT SEQADV 1RVL LEU A 228 UNP P03366 ARG 292 CONFLICT SEQADV 1RVL TRP A 229 UNP P03366 LYS 293 CONFLICT SEQADV 1RVL MET A 230 UNP P03366 TYR 294 CONFLICT SEQADV 1RVL GLY A 231 UNP P03366 THR 295 CONFLICT SEQADV 1RVL TYR A 232 UNP P03366 ALA 296 CONFLICT SEQADV 1RVL GLU A 233 UNP P03366 PHE 297 CONFLICT SEQADV 1RVL LEU A 234 UNP P03366 THR 298 CONFLICT SEQADV 1RVL HIS A 235 UNP P03366 ILE 299 CONFLICT SEQADV 1RVL A UNP P03366 SER 301 DELETION SEQADV 1RVL A UNP P03366 ILE 302 DELETION SEQADV 1RVL GLY A 316 UNP P03366 ASN 303 CONFLICT SEQADV 1RVL VAL A 317 UNP P03366 ASN 304 CONFLICT SEQADV 1RVL TYR A 318 UNP P03366 GLU 305 CONFLICT SEQADV 1RVL TYR A 319 UNP P03366 THR 306 CONFLICT SEQRES 1 A 556 PRO ILE SER PRO ILE GLU THR VAL PRO VAL LYS LEU LYS SEQRES 2 A 556 PRO GLY MET ASP GLY PRO LYS VAL LYS GLN TRP PRO LEU SEQRES 3 A 556 THR GLU GLU LYS ILE LYS ALA LEU VAL GLU ILE CYS THR SEQRES 4 A 556 GLU MET GLU LYS GLU GLY LYS ILE SER LYS ILE GLY PRO SEQRES 5 A 556 GLU ASN PRO TYR ASN THR PRO VAL PHE ALA ILE LYS LYS SEQRES 6 A 556 LYS ASP SER THR LYS TRP ARG LYS LEU VAL ASP PHE ARG SEQRES 7 A 556 GLU LEU ASN LYS ARG THR GLN ASP PHE TRP GLU VAL GLN SEQRES 8 A 556 LEU GLY ILE PRO HIS PRO ALA GLY LEU LYS LYS LYS LYS SEQRES 9 A 556 SER VAL THR VAL LEU ASP VAL ILE VAL ILE TYR GLN TYR SEQRES 10 A 556 MET ASP ASP LEU TYR VAL GLY GLY PHE LEU TRP MET GLY SEQRES 11 A 556 TYR GLU LEU HIS PRO GLY VAL TYR TYR PRO GLY ILE ARG SEQRES 12 A 556 TYR GLN TYR ASN VAL LEU PRO GLN GLY TRP LYS GLY SER SEQRES 13 A 556 PRO ALA ILE PHE GLN SER SER MET THR LYS ILE LEU GLU SEQRES 14 A 556 PRO PHE LYS LYS GLN ASN PRO ASP ILE VAL ILE TYR GLN SEQRES 15 A 556 TYR MET ASP ASP LEU TYR VAL GLY SER ASP LEU GLU ILE SEQRES 16 A 556 GLY GLN HIS ARG THR LYS ILE GLU GLU LEU ARG GLN HIS SEQRES 17 A 556 LEU LEU ARG TRP GLY LEU THR THR PRO ASP LYS LYS HIS SEQRES 18 A 556 GLN LYS GLU PRO PRO PHE LEU TRP MET GLY TYR GLU LEU SEQRES 19 A 556 HIS PRO ASP LYS TRP THR VAL GLN PRO ILE VAL LEU PRO SEQRES 20 A 556 GLU LYS ASP SER TRP THR VAL ASN ASP ILE GLN LYS LEU SEQRES 21 A 556 VAL GLY LYS LEU ASN TRP ALA SER GLN ILE TYR PRO GLY SEQRES 22 A 556 ILE LYS VAL ARG GLN LEU CYS LYS LEU LEU ARG GLY THR SEQRES 23 A 556 LYS ALA LEU THR GLU VAL ILE PRO LEU THR GLU GLU ALA SEQRES 24 A 556 GLU LEU GLU LEU ALA GLU ASN ARG GLU ILE LEU LYS GLU SEQRES 25 A 556 PRO VAL HIS GLY VAL TYR TYR ASP PRO SER LYS ASP LEU SEQRES 26 A 556 ILE ALA GLU ILE GLN LYS GLN GLY GLN GLY GLN TRP THR SEQRES 27 A 556 TYR GLN ILE TYR GLN GLU PRO PHE LYS ASN LEU LYS THR SEQRES 28 A 556 GLY LYS TYR ALA ARG MET ARG GLY ALA HIS THR ASN ASP SEQRES 29 A 556 VAL LYS GLN LEU THR GLU ALA VAL GLN LYS ILE THR THR SEQRES 30 A 556 GLU SER ILE VAL ILE TRP GLY LYS THR PRO LYS PHE LYS SEQRES 31 A 556 LEU PRO ILE GLN LYS GLU THR TRP GLU THR TRP TRP THR SEQRES 32 A 556 GLU TYR TRP GLN ALA THR TRP ILE PRO GLU TRP GLU PHE SEQRES 33 A 556 VAL ASN THR PRO PRO LEU VAL LYS LEU TRP TYR GLN LEU SEQRES 34 A 556 GLU LYS GLU PRO ILE VAL GLY ALA GLU THR PHE TYR VAL SEQRES 35 A 556 ASP GLY ALA ALA ASN ARG GLU THR LYS LEU GLY LYS ALA SEQRES 36 A 556 GLY TYR VAL THR ASN LYS GLY ARG GLN LYS VAL VAL PRO SEQRES 37 A 556 LEU THR ASN THR THR ASN GLN LYS THR GLU LEU GLN ALA SEQRES 38 A 556 ILE TYR LEU ALA LEU GLN ASP SER GLY LEU GLU VAL ASN SEQRES 39 A 556 ILE VAL THR ASP SER GLN TYR ALA LEU GLY ILE ILE GLN SEQRES 40 A 556 ALA GLN PRO ASP LYS SER GLU SER GLU LEU VAL ASN GLN SEQRES 41 A 556 ILE ILE GLU GLN LEU ILE LYS LYS GLU LYS VAL TYR LEU SEQRES 42 A 556 ALA TRP VAL PRO ALA HIS LYS GLY ILE GLY GLY ASN GLU SEQRES 43 A 556 GLN VAL ASP LYS LEU VAL SER ALA GLY ILE HET GLU B 138 17 HET AAP 1 39 HETNAM GLU GLUTAMIC ACID HETNAM AAP ALPHA-(2,6-DICHLOROPHENYL)-ALPHA-(2-ACETYL-5- HETNAM 2 AAP METHYLANILINO)ACETAMIDE FORMUL 2 GLU C5 H9 N O4 FORMUL 3 AAP C17 H16 CL2 N2 O2 HELIX 1 1 PRO A 97 GLY A 99 5 3 SHEET 1 A 3 VAL A 106 LEU A 109 0 SHEET 2 A 3 LEU A 187 GLY A 190 -1 N VAL A 189 O THR A 107 SHEET 3 A 3 ILE A 180 GLN A 182 -1 N TYR A 181 O TYR A 188 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000