PDB Full entry for 1RXA HEADER RNA 05-MAY-95 1RXA TITLE CRYSTAL STRUCTURE OF R(CCCCGGGG) IN TWO DISTINCT LATTICES COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA (5'-R(*CP*CP*CP*CP*GP*GP*GP*G)-3'); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES KEYWDS A-RNA, DOUBLE HELIX, RNA EXPDTA X-RAY DIFFRACTION AUTHOR S.PORTMANN,N.USMAN,M.EGLI REVDAT 4 14-FEB-24 1RXA 1 REMARK REVDAT 3 24-FEB-09 1RXA 1 VERSN REVDAT 2 01-APR-03 1RXA 1 JRNL REVDAT 1 20-OCT-96 1RXA 0 JRNL AUTH S.PORTMANN,N.USMAN,M.EGLI JRNL TITL THE CRYSTAL STRUCTURE OF R(CCCCGGGG) IN TWO DISTINCT JRNL TITL 2 LATTICES. JRNL REF BIOCHEMISTRY V. 34 7569 1995 JRNL REFN ISSN 0006-2960 JRNL PMID 7779802 JRNL DOI 10.1021/BI00023A002 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 710 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.250 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 169 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1RXA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB. REMARK 100 THE DEPOSITION ID IS D_1000176263. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 4.50 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : ENRAF-NONIUS REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 4.50, VAPOR DIFFUSION REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 19.51500 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 39.03000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 29.27250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 48.78750 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 9.75750 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 19.51500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 39.03000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 48.78750 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 29.27250 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 9.75750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 39.73400 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 29.27250 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 C A 1 C3' C A 1 C2' -0.118 REMARK 500 C A 1 C2' C A 1 C1' 0.071 REMARK 500 C A 2 P C A 2 O5' 0.066 REMARK 500 C A 2 C5' C A 2 C4' -0.064 REMARK 500 C A 2 O3' C A 2 C3' -0.094 REMARK 500 C A 2 C2' C A 2 O2' -0.086 REMARK 500 C A 2 N3 C A 2 C4 0.045 REMARK 500 C A 3 P C A 3 O5' 0.070 REMARK 500 C A 3 C2' C A 3 C1' 0.108 REMARK 500 C A 3 O4' C A 3 C1' 0.087 REMARK 500 C A 3 C4 C A 3 N4 0.057 REMARK 500 C A 4 C5' C A 4 C4' 0.078 REMARK 500 G A 5 C2' G A 5 C1' 0.107 REMARK 500 G A 5 C6 G A 5 N1 -0.069 REMARK 500 G A 5 N7 G A 5 C8 0.042 REMARK 500 G A 5 C8 G A 5 N9 -0.065 REMARK 500 G A 5 C2 G A 5 N2 -0.081 REMARK 500 G A 6 C6 G A 6 N1 -0.100 REMARK 500 G A 6 C2 G A 6 N2 -0.099 REMARK 500 G A 7 C1' G A 7 N9 -0.105 REMARK 500 G A 7 C6 G A 7 N1 -0.072 REMARK 500 G A 7 C5 G A 7 N7 -0.071 REMARK 500 G A 7 N7 G A 7 C8 0.041 REMARK 500 G A 7 C2 G A 7 N2 -0.079 REMARK 500 G A 8 P G A 8 O5' 0.074 REMARK 500 G A 8 O5' G A 8 C5' -0.063 REMARK 500 G A 8 O3' G A 8 C3' 0.166 REMARK 500 G A 8 C2' G A 8 O2' 0.192 REMARK 500 G A 8 C6 G A 8 N1 -0.044 REMARK 500 G A 8 C5 G A 8 N7 -0.053 REMARK 500 G A 8 C2 G A 8 N2 -0.115 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 C A 1 C2' - C3' - O3' ANGL. DEV. = 16.4 DEGREES REMARK 500 C A 1 C4' - C3' - C2' ANGL. DEV. = 7.5 DEGREES REMARK 500 C A 1 C3' - C2' - O2' ANGL. DEV. = 19.2 DEGREES REMARK 500 C A 1 C2 - N3 - C4 ANGL. DEV. = 3.3 DEGREES REMARK 500 C A 1 N3 - C4 - C5 ANGL. DEV. = -4.5 DEGREES REMARK 500 C A 1 C4 - C5 - C6 ANGL. DEV. = 3.3 DEGREES REMARK 500 C A 1 N1 - C2 - O2 ANGL. DEV. = 7.8 DEGREES REMARK 500 C A 1 N3 - C2 - O2 ANGL. DEV. = -4.7 DEGREES REMARK 500 C A 1 N3 - C4 - N4 ANGL. DEV. = -4.8 DEGREES REMARK 500 C A 1 C5 - C4 - N4 ANGL. DEV. = 9.2 DEGREES REMARK 500 C A 1 C2 - N1 - C1' ANGL. DEV. = -6.8 DEGREES REMARK 500 C A 2 O5' - P - OP1 ANGL. DEV. = 8.5 DEGREES REMARK 500 C A 2 O5' - P - OP2 ANGL. DEV. = -7.5 DEGREES REMARK 500 C A 2 P - O5' - C5' ANGL. DEV. = -16.4 DEGREES REMARK 500 C A 2 O4' - C4' - C3' ANGL. DEV. = -9.2 DEGREES REMARK 500 C A 2 C5' - C4' - O4' ANGL. DEV. = -14.9 DEGREES REMARK 500 C A 2 C3' - C2' - C1' ANGL. DEV. = -5.8 DEGREES REMARK 500 C A 2 C2 - N3 - C4 ANGL. DEV. = 4.4 DEGREES REMARK 500 C A 2 N3 - C4 - C5 ANGL. DEV. = -4.3 DEGREES REMARK 500 C A 2 N1 - C2 - O2 ANGL. DEV. = 6.5 DEGREES REMARK 500 C A 2 C5 - C4 - N4 ANGL. DEV. = 5.6 DEGREES REMARK 500 C A 2 C3' - O3' - P ANGL. DEV. = 13.9 DEGREES REMARK 500 C A 3 O5' - P - OP1 ANGL. DEV. = -15.7 DEGREES REMARK 500 C A 3 O5' - P - OP2 ANGL. DEV. = 15.9 DEGREES REMARK 500 C A 3 P - O5' - C5' ANGL. DEV. = -9.9 DEGREES REMARK 500 C A 3 C5' - C4' - C3' ANGL. DEV. = 9.6 DEGREES REMARK 500 C A 3 C1' - O4' - C4' ANGL. DEV. = 5.3 DEGREES REMARK 500 C A 3 C2' - C3' - O3' ANGL. DEV. = 10.3 DEGREES REMARK 500 C A 3 C4' - C3' - C2' ANGL. DEV. = 7.9 DEGREES REMARK 500 C A 3 O4' - C1' - C2' ANGL. DEV. = -8.5 DEGREES REMARK 500 C A 3 O4' - C1' - N1 ANGL. DEV. = 9.7 DEGREES REMARK 500 C A 3 C2 - N3 - C4 ANGL. DEV. = 6.6 DEGREES REMARK 500 C A 3 N3 - C4 - C5 ANGL. DEV. = -6.2 DEGREES REMARK 500 C A 3 C5 - C6 - N1 ANGL. DEV. = 4.8 DEGREES REMARK 500 C A 3 N1 - C2 - O2 ANGL. DEV. = 4.1 DEGREES REMARK 500 C A 3 N3 - C4 - N4 ANGL. DEV. = 7.9 DEGREES REMARK 500 C A 3 C3' - O3' - P ANGL. DEV. = 10.6 DEGREES REMARK 500 C A 4 O3' - P - O5' ANGL. DEV. = 11.9 DEGREES REMARK 500 C A 4 O3' - P - OP2 ANGL. DEV. = 7.5 DEGREES REMARK 500 C A 4 O3' - P - OP1 ANGL. DEV. = -14.2 DEGREES REMARK 500 C A 4 O5' - P - OP1 ANGL. DEV. = -13.0 DEGREES REMARK 500 C A 4 O5' - C5' - C4' ANGL. DEV. = -7.2 DEGREES REMARK 500 C A 4 O4' - C4' - C3' ANGL. DEV. = -11.0 DEGREES REMARK 500 C A 4 C5' - C4' - C3' ANGL. DEV. = 11.7 DEGREES REMARK 500 C A 4 O4' - C1' - N1 ANGL. DEV. = -8.9 DEGREES REMARK 500 C A 4 C2 - N3 - C4 ANGL. DEV. = 4.6 DEGREES REMARK 500 C A 4 N1 - C2 - O2 ANGL. DEV. = 3.7 DEGREES REMARK 500 C A 4 C3' - O3' - P ANGL. DEV. = -11.9 DEGREES REMARK 500 G A 5 O3' - P - O5' ANGL. DEV. = 11.9 DEGREES REMARK 500 G A 5 O3' - P - OP1 ANGL. DEV. = -15.0 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 107 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1RXA A 1 8 PDB 1RXA 1RXA 1 8 SEQRES 1 A 8 C C C C G G G G CRYST1 39.734 39.734 58.545 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025167 0.014530 0.000000 0.00000 SCALE2 0.000000 0.029061 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017081 0.00000 ATOM 1 O5' C A 1 15.528 21.626 11.344 1.00 25.39 O ATOM 2 C5' C A 1 15.224 21.986 12.693 1.00 24.28 C ATOM 3 C4' C A 1 13.735 21.980 12.898 1.00 24.09 C ATOM 4 O4' C A 1 13.102 21.543 11.713 1.00 23.77 O ATOM 5 C3' C A 1 13.240 20.881 13.925 1.00 24.61 C ATOM 6 O3' C A 1 13.708 21.313 15.176 1.00 27.04 O ATOM 7 C2' C A 1 11.974 20.403 13.548 1.00 23.42 C ATOM 8 O2' C A 1 10.636 20.820 13.883 1.00 23.37 O ATOM 9 C1' C A 1 11.998 20.623 11.963 1.00 21.32 C ATOM 10 N1 C A 1 12.121 19.347 11.141 1.00 19.31 N ATOM 11 C2 C A 1 11.248 18.391 11.551 1.00 18.38 C ATOM 12 O2 C A 1 10.450 18.471 12.499 1.00 18.97 O ATOM 13 N3 C A 1 11.260 17.212 10.833 1.00 17.78 N ATOM 14 C4 C A 1 12.164 16.949 9.837 1.00 16.82 C ATOM 15 N4 C A 1 12.044 15.714 9.328 1.00 15.39 N ATOM 16 C5 C A 1 13.088 17.967 9.511 1.00 16.98 C ATOM 17 C6 C A 1 13.040 19.131 10.110 1.00 17.31 C ATOM 18 P C A 2 14.851 20.380 15.754 1.00 29.90 P ATOM 19 OP1 C A 2 16.038 21.080 15.997 1.00 28.78 O ATOM 20 OP2 C A 2 15.015 19.241 14.697 1.00 31.48 O ATOM 21 O5' C A 2 14.182 19.475 16.973 1.00 27.30 O ATOM 22 C5' C A 2 12.857 19.961 17.090 1.00 24.92 C ATOM 23 C4' C A 2 11.948 18.932 17.538 1.00 24.37 C ATOM 24 O4' C A 2 11.595 18.548 16.264 1.00 24.42 O ATOM 25 C3' C A 2 12.399 17.531 17.974 1.00 24.68 C ATOM 26 O3' C A 2 12.835 17.380 19.214 1.00 25.28 O ATOM 27 C2' C A 2 11.268 16.582 17.571 1.00 24.23 C ATOM 28 O2' C A 2 10.100 16.366 18.160 1.00 24.78 O ATOM 29 C1' C A 2 10.974 17.269 16.218 1.00 23.47 C ATOM 30 N1 C A 2 11.724 16.503 15.146 1.00 22.72 N ATOM 31 C2 C A 2 11.230 15.259 14.909 1.00 22.33 C ATOM 32 O2 C A 2 10.312 14.721 15.537 1.00 22.58 O ATOM 33 N3 C A 2 11.810 14.583 13.867 1.00 22.10 N ATOM 34 C4 C A 2 12.892 15.046 13.146 1.00 21.92 C ATOM 35 N4 C A 2 13.431 14.184 12.238 1.00 20.91 N ATOM 36 C5 C A 2 13.401 16.344 13.473 1.00 21.99 C ATOM 37 C6 C A 2 12.797 17.024 14.440 1.00 22.12 C ATOM 38 P C A 3 14.003 16.523 19.868 1.00 26.21 P ATOM 39 OP1 C A 3 13.632 16.676 21.270 1.00 27.70 O ATOM 40 OP2 C A 3 15.329 17.065 19.473 1.00 24.97 O ATOM 41 O5' C A 3 13.563 14.920 19.925 1.00 23.79 O ATOM 42 C5' C A 3 12.164 14.780 19.884 1.00 22.28 C ATOM 43 C4' C A 3 11.803 13.339 20.139 1.00 23.10 C ATOM 44 O4' C A 3 10.952 12.804 19.118 1.00 23.18 O ATOM 45 C3' C A 3 12.825 12.145 20.264 1.00 23.46 C ATOM 46 O3' C A 3 13.229 12.183 21.587 1.00 25.31 O ATOM 47 C2' C A 3 12.283 10.913 19.583 1.00 22.13 C ATOM 48 O2' C A 3 11.279 10.044 20.005 1.00 21.38 O ATOM 49 C1' C A 3 11.534 11.662 18.335 1.00 21.53 C ATOM 50 N1 C A 3 12.547 11.976 17.265 1.00 19.92 N ATOM 51 C2 C A 3 13.009 11.048 16.420 1.00 19.16 C ATOM 52 O2 C A 3 12.576 9.922 16.380 1.00 19.29 O ATOM 53 N3 C A 3 14.028 11.415 15.630 1.00 19.09 N ATOM 54 C4 C A 3 14.574 12.650 15.543 1.00 19.44 C ATOM 55 N4 C A 3 15.629 13.020 14.713 1.00 20.06 N ATOM 56 C5 C A 3 13.986 13.641 16.364 1.00 19.60 C ATOM 57 C6 C A 3 13.057 13.238 17.191 1.00 19.73 C ATOM 58 P C A 4 14.564 11.673 22.263 1.00 26.89 P ATOM 59 OP1 C A 4 13.876 11.455 23.513 1.00 28.88 O ATOM 60 OP2 C A 4 15.729 12.517 22.181 1.00 26.45 O ATOM 61 O5' C A 4 14.897 10.076 22.079 1.00 26.59 O ATOM 62 C5' C A 4 13.720 9.235 22.180 1.00 25.82 C ATOM 63 C4' C A 4 14.182 7.919 21.423 1.00 26.07 C ATOM 64 O4' C A 4 14.191 8.350 19.985 1.00 25.56 O ATOM 65 C3' C A 4 15.549 7.352 21.343 1.00 25.91 C ATOM 66 O3' C A 4 15.948 6.457 22.282 1.00 26.46 O ATOM 67 C2' C A 4 15.603 6.458 20.041 1.00 25.31 C ATOM 68 O2' C A 4 15.142 5.144 20.456 1.00 26.05 O ATOM 69 C1' C A 4 14.727 7.308 19.131 1.00 23.68 C ATOM 70 N1 C A 4 15.525 8.168 18.167 1.00 21.94 N ATOM 71 C2 C A 4 16.224 7.496 17.236 1.00 21.47 C ATOM 72 O2 C A 4 16.179 6.261 17.129 1.00 22.21 O ATOM 73 N3 C A 4 17.005 8.267 16.427 1.00 20.63 N ATOM 74 C4 C A 4 17.034 9.611 16.452 1.00 20.69 C ATOM 75 N4 C A 4 17.808 10.271 15.589 1.00 21.38 N ATOM 76 C5 C A 4 16.240 10.302 17.378 1.00 21.22 C ATOM 77 C6 C A 4 15.541 9.538 18.219 1.00 21.52 C ATOM 78 P G A 5 17.529 6.632 22.484 1.00 27.03 P ATOM 79 OP1 G A 5 17.430 6.038 23.811 1.00 29.20 O ATOM 80 OP2 G A 5 17.989 8.008 22.317 1.00 26.70 O ATOM 81 O5' G A 5 18.440 5.492 21.853 1.00 25.59 O ATOM 82 C5' G A 5 17.701 4.303 21.720 1.00 24.61 C ATOM 83 C4' G A 5 18.865 3.696 20.844 1.00 25.10 C ATOM 84 O4' G A 5 18.486 4.316 19.602 1.00 23.98 O ATOM 85 C3' G A 5 20.339 4.216 20.905 1.00 25.39 C ATOM 86 O3' G A 5 20.979 3.978 22.143 1.00 26.63 O ATOM 87 C2' G A 5 20.835 3.792 19.520 1.00 24.04 C ATOM 88 O2' G A 5 20.969 2.459 19.267 1.00 22.87 O ATOM 89 C1' G A 5 19.503 4.224 18.675 1.00 23.58 C ATOM 90 N9 G A 5 19.753 5.519 18.186 1.00 22.96 N ATOM 91 C8 G A 5 19.430 6.616 18.823 1.00 23.26 C ATOM 92 N7 G A 5 19.790 7.750 18.191 1.00 23.75 N ATOM 93 C5 G A 5 20.394 7.270 17.078 1.00 22.81 C ATOM 94 C6 G A 5 21.082 7.961 16.054 1.00 22.87 C ATOM 95 O6 G A 5 21.181 9.213 16.018 1.00 23.09 O ATOM 96 N1 G A 5 21.651 7.228 15.112 1.00 23.34 N ATOM 97 C2 G A 5 21.529 5.880 15.146 1.00 23.22 C ATOM 98 N2 G A 5 21.987 5.143 14.233 1.00 23.02 N ATOM 99 N3 G A 5 20.917 5.140 16.081 1.00 23.04 N ATOM 100 C4 G A 5 20.377 5.929 17.023 1.00 22.79 C ATOM 101 P G A 6 22.587 3.926 22.358 1.00 27.64 P ATOM 102 OP1 G A 6 22.698 2.738 23.184 1.00 28.55 O ATOM 103 OP2 G A 6 22.975 5.237 22.894 1.00 27.27 O ATOM 104 O5' G A 6 23.476 3.666 21.062 1.00 26.27 O ATOM 105 C5' G A 6 23.776 2.479 20.446 1.00 25.29 C ATOM 106 C4' G A 6 24.661 2.919 19.227 1.00 24.11 C ATOM 107 O4' G A 6 23.738 3.772 18.486 1.00 23.25 O ATOM 108 C3' G A 6 25.832 3.916 19.295 1.00 23.11 C ATOM 109 O3' G A 6 26.917 3.320 19.860 1.00 22.29 O ATOM 110 C2' G A 6 26.063 4.251 17.788 1.00 22.83 C ATOM 111 O2' G A 6 26.795 3.144 17.225 1.00 24.06 O ATOM 112 C1' G A 6 24.607 4.353 17.476 1.00 22.43 C ATOM 113 N9 G A 6 24.213 5.698 17.641 1.00 22.64 N ATOM 114 C8 G A 6 23.329 6.294 18.498 1.00 22.33 C ATOM 115 N7 G A 6 23.201 7.607 18.322 1.00 21.91 N ATOM 116 C5 G A 6 24.033 7.837 17.237 1.00 22.10 C ATOM 117 C6 G A 6 24.384 9.027 16.564 1.00 21.85 C ATOM 118 O6 G A 6 23.920 10.154 16.850 1.00 22.58 O ATOM 119 N1 G A 6 25.241 8.940 15.602 1.00 21.63 N ATOM 120 C2 G A 6 25.728 7.743 15.259 1.00 22.35 C ATOM 121 N2 G A 6 26.567 7.667 14.346 1.00 23.08 N ATOM 122 N3 G A 6 25.541 6.513 15.776 1.00 22.04 N ATOM 123 C4 G A 6 24.647 6.699 16.780 1.00 22.34 C ATOM 124 P G A 7 28.167 4.130 20.555 1.00 20.55 P ATOM 125 OP1 G A 7 28.775 2.925 21.001 1.00 20.51 O ATOM 126 OP2 G A 7 27.520 5.278 21.129 1.00 19.44 O ATOM 127 O5' G A 7 29.303 4.525 19.433 1.00 20.55 O ATOM 128 C5' G A 7 29.315 3.795 18.189 1.00 18.23 C ATOM 129 C4' G A 7 29.920 4.817 17.208 1.00 17.01 C ATOM 130 O4' G A 7 28.818 5.672 16.903 1.00 15.49 O ATOM 131 C3' G A 7 30.935 5.798 17.651 1.00 17.32 C ATOM 132 O3' G A 7 32.286 5.437 17.784 1.00 19.18 O ATOM 133 C2' G A 7 30.737 6.942 16.727 1.00 17.17 C ATOM 134 O2' G A 7 31.232 6.924 15.390 1.00 19.54 O ATOM 135 C1' G A 7 29.297 6.779 16.189 1.00 15.12 C ATOM 136 N9 G A 7 28.735 7.962 16.551 1.00 14.05 N ATOM 137 C8 G A 7 27.893 7.909 17.593 1.00 14.31 C ATOM 138 N7 G A 7 27.259 9.055 17.905 1.00 13.91 N ATOM 139 C5 G A 7 27.851 9.882 17.068 1.00 13.48 C ATOM 140 C6 G A 7 27.615 11.258 16.972 1.00 13.70 C ATOM 141 O6 G A 7 26.737 11.857 17.624 1.00 12.83 O ATOM 142 N1 G A 7 28.338 11.849 16.040 1.00 14.90 N ATOM 143 C2 G A 7 29.179 11.089 15.249 1.00 15.17 C ATOM 144 N2 G A 7 29.803 11.721 14.352 1.00 15.18 N ATOM 145 N3 G A 7 29.490 9.760 15.259 1.00 14.36 N ATOM 146 C4 G A 7 28.728 9.262 16.226 1.00 13.78 C ATOM 147 P G A 8 33.285 6.554 18.488 1.00 21.30 P ATOM 148 OP1 G A 8 34.562 5.884 18.723 1.00 21.31 O ATOM 149 OP2 G A 8 32.508 6.935 19.678 1.00 20.61 O ATOM 150 O5' G A 8 33.559 7.823 17.443 1.00 18.83 O ATOM 151 C5' G A 8 34.448 8.831 17.627 1.00 17.09 C ATOM 152 C4' G A 8 34.868 10.055 16.784 1.00 15.43 C ATOM 153 O4' G A 8 33.462 10.327 16.612 1.00 13.79 O ATOM 154 C3' G A 8 35.675 11.262 17.094 1.00 15.90 C ATOM 155 O3' G A 8 37.041 11.791 16.468 1.00 15.36 O ATOM 156 C2' G A 8 34.653 12.355 16.713 1.00 16.85 C ATOM 157 O2' G A 8 35.566 13.334 15.815 1.00 19.61 O ATOM 158 C1' G A 8 33.326 11.703 16.228 1.00 15.20 C ATOM 159 N9 G A 8 32.179 11.932 16.983 1.00 14.57 N ATOM 160 C8 G A 8 31.569 11.002 17.720 1.00 15.02 C ATOM 161 N7 G A 8 30.559 11.436 18.465 1.00 15.34 N ATOM 162 C5 G A 8 30.532 12.737 18.168 1.00 15.25 C ATOM 163 C6 G A 8 29.660 13.730 18.676 1.00 16.27 C ATOM 164 O6 G A 8 28.785 13.558 19.582 1.00 17.07 O ATOM 165 N1 G A 8 29.723 14.969 18.152 1.00 16.36 N ATOM 166 C2 G A 8 30.689 15.124 17.246 1.00 16.49 C ATOM 167 N2 G A 8 30.684 16.281 16.840 1.00 17.44 N ATOM 168 N3 G A 8 31.630 14.291 16.712 1.00 15.65 N ATOM 169 C4 G A 8 31.469 13.088 17.256 1.00 15.23 C TER 170 G A 8 MASTER 352 0 0 0 0 0 0 6 169 1 0 1 END