PDB Short entry for 1S6W
HEADER    ANTIBIOTIC                              28-JAN-04   1S6W              
TITLE     SOLUTION STRUCTURE OF HYBRID WHITE STRIPED BASS HEPCIDIN              
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: HEPCIDIN;                                                  
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: HEPCIDIN, MATURE FORM (RESIDUES 65-85);                    
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 SYNTHETIC: YES;                                                      
SOURCE   3 OTHER_DETAILS: THE PROTEIN WAS CHEMICALLY SYNTHESIZED, THE SEQUENCE  
SOURCE   4 OF THE PROTEIN OCCURS NATURALLY IN HYBRID WHITE STRIPED BASS         
KEYWDS    TWO STRAND ANTIPARALELL BETA SHEET, ANTIBIOTIC                        
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    J.J.BABON,S.SINGH,M.W.PENNINGTON,R.S.NORTON,M.E.WESTERMAN             
REVDAT   4   02-MAR-22 1S6W    1       REMARK                                   
REVDAT   3   24-FEB-09 1S6W    1       VERSN                                    
REVDAT   2   19-APR-05 1S6W    1       JRNL                                     
REVDAT   1   14-DEC-04 1S6W    0                                                
JRNL        AUTH   X.LAUTH,J.J.BABON,J.A.STANNARD,S.SINGH,V.NIZET,J.M.CARLBERG, 
JRNL        AUTH 2 V.E.OSTLAND,M.W.PENNINGTON,R.S.NORTON,M.E.WESTERMAN          
JRNL        TITL   BASS HEPCIDIN SYNTHESIS, SOLUTION STRUCTURE, ANTIMICROBIAL   
JRNL        TITL 2 ACTIVITIES AND SYNERGISM, AND IN VIVO HEPATIC RESPONSE TO    
JRNL        TITL 3 BACTERIAL INFECTIONS.                                        
JRNL        REF    J.BIOL.CHEM.                  V. 280  9272 2005              
JRNL        REFN                   ISSN 0021-9258                               
JRNL        PMID   15546886                                                     
JRNL        DOI    10.1074/JBC.M411154200                                       
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : X-PLOR-NIH 2.0.6, X-PLOR-NIH 2.0.6                   
REMARK   3   AUTHORS     : C.D.SCHWIETERS, J.J.KUSZEWSKI, N.TJANDRA AND         
REMARK   3                 G.M.CLORE (X-PLOR-NIH), C.D.SCHWIETERS,              
REMARK   3                 J.J.KUSZEWSKI, N.TJANDRA AND G.M.CLORE (X-PLOR-NIH)  
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON 188 NOE       
REMARK   3  -DERIVED DISTANCE CONSTRAINTS, 238 DIHEDRAL ANGLE RESTRAINTS, 4     
REMARK   3  DISTANCE RESTRAINTSFROM HYDROGEN BONDS                              
REMARK   4                                                                      
REMARK   4 1S6W COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JAN-04.                  
REMARK 100 THE DEPOSITION ID IS D_1000021442.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298; 298                           
REMARK 210  PH                             : 4.7; 4.5                           
REMARK 210  IONIC STRENGTH                 : 0; 10MM CD3COONA                   
REMARK 210  PRESSURE                       : 1 ATM; 1 ATM                       
REMARK 210  SAMPLE CONTENTS                : 3.5MM HEPCIDIN, 95% H2O, 5% D2O,   
REMARK 210                                   PH=4.7; 3.5MM HEPCIDIN, 100% D2O,  
REMARK 210                                   10MM CD3COONA, PH=4.5              
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : DQF-COSY; 2D TOCSY; 2D NOESY; E    
REMARK 210                                   -COSY; 13C-HSQC                    
REMARK 210  SPECTROMETER FIELD STRENGTH    : 500 MHZ                            
REMARK 210  SPECTROMETER MODEL             : DRX; AVANCE                        
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NMRPIPE 1, XWINNMR 3.5             
REMARK 210   METHOD USED                   : SIMULATED ANNEALING MOLECULAR      
REMARK 210                                   DYNAMICS TORSION ANGLE DYNAMICS    
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : THE SUBMITTED CONFORMER MODELS     
REMARK 210                                   ARE THE 20 STRUCTURES WITH THE     
REMARK 210                                   LOWEST ENERGY                      
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 4                   
REMARK 210                                                                      
REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD 2D              
REMARK 210  HOMONUCLEAR TECHNIQUES AND CHEMICAL SHIFT DATA WAS OBTAINED         
REMARK 210  USING STANDARD 2D HETERONUCLEAR TECHNIQUES PERFORMED AT NATURAL     
REMARK 210  ABUNDANCE ISOTOPE LEVELS                                            
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    ARG A     3     H    CYS A    18              1.57            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 ASN A   7       55.52   -170.57                                   
REMARK 500  1 ASN A  11       24.69   -153.96                                   
REMARK 500  2 CYS A   6       51.29   -117.63                                   
REMARK 500  2 ASN A   7       54.67   -178.87                                   
REMARK 500  2 ASN A  11      -40.43   -141.99                                   
REMARK 500  3 ASN A   7       68.35   -174.33                                   
REMARK 500  3 PRO A  10       48.43    -73.45                                   
REMARK 500  3 ASN A  11       47.98   -161.18                                   
REMARK 500  3 SER A  13       48.82    -94.87                                   
REMARK 500  4 ASN A   7       69.24   -169.57                                   
REMARK 500  4 ASN A  11       33.94   -160.85                                   
REMARK 500  5 ASN A   7      101.15   -178.28                                   
REMARK 500  5 CYS A   8      -40.01   -139.34                                   
REMARK 500  5 ASN A  11       24.53   -159.33                                   
REMARK 500  5 MET A  12       88.75   -174.38                                   
REMARK 500  6 CYS A   6       42.26   -106.19                                   
REMARK 500  6 ASN A   7       52.63   -172.59                                   
REMARK 500  6 PRO A  10       46.34    -74.78                                   
REMARK 500  6 ASN A  11       41.09   -160.67                                   
REMARK 500  6 SER A  13       38.38    -96.39                                   
REMARK 500  7 ASN A   7      133.41   -179.16                                   
REMARK 500  7 CYS A   8      -40.08   -169.07                                   
REMARK 500  7 ASN A  11       34.74   -160.90                                   
REMARK 500  7 MET A  12       80.91   -175.78                                   
REMARK 500  8 ASN A   7       59.34   -162.70                                   
REMARK 500  8 ASN A  11       32.08   -160.25                                   
REMARK 500  9 CYS A   6       46.40    -96.93                                   
REMARK 500  9 ASN A   7       63.69   -175.12                                   
REMARK 500  9 PRO A  10       49.70    -71.08                                   
REMARK 500  9 ASN A  11       48.41   -161.47                                   
REMARK 500 10 ASN A   7       64.39   -170.35                                   
REMARK 500 10 ASN A  11       17.41   -146.50                                   
REMARK 500 10 SER A  13       54.78    -98.19                                   
REMARK 500 11 ASN A   7      100.53   -174.04                                   
REMARK 500 11 CYS A   8      -40.60   -145.35                                   
REMARK 500 11 ASN A  11       26.71   -156.12                                   
REMARK 500 11 MET A  12       99.77   -173.12                                   
REMARK 500 12 ASN A   7       44.91   -175.73                                   
REMARK 500 12 ASN A  11      -49.26   -152.66                                   
REMARK 500 13 CYS A   6       33.38    -97.07                                   
REMARK 500 13 ASN A   7       98.42   -174.51                                   
REMARK 500 13 ASN A  11       21.67   -154.45                                   
REMARK 500 13 MET A  12      104.35   -160.78                                   
REMARK 500 14 ASN A   7      123.68   -177.07                                   
REMARK 500 14 CYS A   8      -44.04   -176.87                                   
REMARK 500 14 ASN A  11       32.88   -144.90                                   
REMARK 500 14 MET A  12      103.56   -173.11                                   
REMARK 500 15 ASN A   7      103.25   -164.67                                   
REMARK 500 15 CYS A   8      -42.68   -141.59                                   
REMARK 500 15 ASN A  11       36.25   -160.95                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS      63 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
DBREF  1S6W A    1    21  UNP    P82951   HEPC_MORCS      65     85             
SEQRES   1 A   21  GLY CYS ARG PHE CYS CYS ASN CYS CYS PRO ASN MET SER          
SEQRES   2 A   21  GLY CYS GLY VAL CYS CYS ARG PHE                              
SHEET    1   A 2 ARG A   3  CYS A   5  0                                        
SHEET    2   A 2 GLY A  16  CYS A  18 -1  O  CYS A  18   N  ARG A   3           
SSBOND   1 CYS A    2    CYS A   19                          1555   1555  2.02  
SSBOND   2 CYS A    5    CYS A   18                          1555   1555  2.02  
SSBOND   3 CYS A    6    CYS A   15                          1555   1555  2.02  
SSBOND   4 CYS A    8    CYS A    9                          1555   1555  2.05  
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000