PDB Short entry for 1SKO HEADER SIGNALING PROTEIN 05-MAR-04 1SKO TITLE MP1-P14 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE KINASE 1 COMPND 3 INTERACTING PROTEIN 1; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: MEK BINDING PARTNER 1, MP1, PRO2783; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: LATE ENDOSOMAL/LYSOSOMAL MP1 INTERACTING PROTEIN; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: P14; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAP2K1IP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: MODIFIED PETDUET-1; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 12 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 13 ORGANISM_TAXID: 10090; SOURCE 14 GENE: MAPBPIP; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: MODIFIED PETDUET-1 KEYWDS MAP KINASE PATHWAY, MP1-P14 COMPLEX, SCAFFOLD PROTEINS, KEYWDS 2 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.V.LUNIN,C.MUNGER,J.WAGNER,Z.YE,M.CYGLER,M.SACHER REVDAT 2 24-FEB-09 1SKO 1 VERSN REVDAT 1 01-JUN-04 1SKO 0 JRNL AUTH V.V.LUNIN,C.MUNGER,J.WAGNER,Z.YE,M.CYGLER,M.SACHER JRNL TITL THE STRUCTURE OF THE MAP KINASE SCAFFOLD MP1 BOUND JRNL TITL 2 TO ITS PARTNER P14: A COMPLEX WITH A CRITICAL ROLE JRNL TITL 3 IN ENDOSOMAL MAP KINASE SIGNALING JRNL REF J.BIOL.CHEM. V. 279 23422 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 15016825 JRNL DOI 10.1074/JBC.M401648200 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.22 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 15937 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 854 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1145 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2230 REMARK 3 BIN FREE R VALUE SET COUNT : 49 REMARK 3 BIN FREE R VALUE : 0.2950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1802 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.66000 REMARK 3 B22 (A**2) : -0.04000 REMARK 3 B33 (A**2) : -1.62000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.209 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.197 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.135 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.743 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1830 ; 0.022 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2478 ; 1.923 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 233 ; 8.466 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 291 ; 0.137 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1354 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 940 ; 0.250 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 208 ; 0.202 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 38 ; 0.243 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 20 ; 0.287 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1166 ; 1.191 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1866 ; 2.120 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 664 ; 3.086 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 612 ; 4.720 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1SKO COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-MAR-04. REMARK 100 THE RCSB ID CODE IS RCSB021794. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-03; 22-NOV-03 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : NSLS; NSLS REMARK 200 BEAMLINE : X8C; X8C REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1000; 0.979267, 0.979553, REMARK 200 0.964318 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111); REMARK 200 SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4; ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16750 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG 3350, 0.1M TRIS-HCL BUFFER, REMARK 280 PH 9.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.48700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.64000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.09650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 36.64000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.48700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.09650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -17 REMARK 465 GLY A -16 REMARK 465 SER A -15 REMARK 465 SER A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 GLU A -5 REMARK 465 ASN A -4 REMARK 465 LEU A -3 REMARK 465 TYR A -2 REMARK 465 PHE A -1 REMARK 465 GLN A 0 REMARK 465 GLN A 120 REMARK 465 VAL A 121 REMARK 465 VAL A 122 REMARK 465 GLU A 123 REMARK 465 VAL A 124 REMARK 465 SER A 125 REMARK 465 MET B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 LEU B 1 REMARK 465 ARG B 2 REMARK 465 THR B 119 REMARK 465 GLN B 120 REMARK 465 VAL B 121 REMARK 465 ALA B 122 REMARK 465 ALA B 123 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 204 O HOH B 223 1.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 235 O HOH B 230 2665 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 39 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 THR B 39 N - CA - C ANGL. DEV. = -16.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 67 -158.72 62.19 REMARK 500 TYR A 76 -169.24 -107.60 REMARK 500 LEU A 118 81.51 -158.43 REMARK 500 LYS B 4 -30.51 -151.91 REMARK 500 ASP B 38 41.77 -152.95 REMARK 500 THR B 39 -79.04 -98.47 REMARK 500 ASP B 40 120.98 156.90 REMARK 500 ALA B 62 -69.70 -126.00 REMARK 500 ASP B 66 68.53 -150.86 REMARK 500 ALA B 86 -112.96 47.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP B 38 THR B 39 131.05 REMARK 500 THR B 39 ASP B 40 -135.75 REMARK 500 REMARK 500 REMARK: NULL DBREF 1SKO A 3 125 UNP Q9UHA4 MK1I1_HUMAN 2 124 DBREF 1SKO B 1 123 UNP Q9JHS3 LM1P_MOUSE 2 124 SEQADV 1SKO MET A -17 UNP Q9UHA4 INITIATING METHIONINE SEQADV 1SKO GLY A -16 UNP Q9UHA4 CLONING ARTIFACT SEQADV 1SKO SER A -15 UNP Q9UHA4 CLONING ARTIFACT SEQADV 1SKO SER A -14 UNP Q9UHA4 CLONING ARTIFACT SEQADV 1SKO HIS A -13 UNP Q9UHA4 EXPRESSION TAG SEQADV 1SKO HIS A -12 UNP Q9UHA4 EXPRESSION TAG SEQADV 1SKO HIS A -11 UNP Q9UHA4 EXPRESSION TAG SEQADV 1SKO HIS A -10 UNP Q9UHA4 EXPRESSION TAG SEQADV 1SKO HIS A -9 UNP Q9UHA4 EXPRESSION TAG SEQADV 1SKO HIS A -8 UNP Q9UHA4 EXPRESSION TAG SEQADV 1SKO HIS A -7 UNP Q9UHA4 EXPRESSION TAG SEQADV 1SKO HIS A -6 UNP Q9UHA4 EXPRESSION TAG SEQADV 1SKO GLU A -5 UNP Q9UHA4 CLONING ARTIFACT SEQADV 1SKO ASN A -4 UNP Q9UHA4 CLONING ARTIFACT SEQADV 1SKO LEU A -3 UNP Q9UHA4 CLONING ARTIFACT SEQADV 1SKO TYR A -2 UNP Q9UHA4 CLONING ARTIFACT SEQADV 1SKO PHE A -1 UNP Q9UHA4 CLONING ARTIFACT SEQADV 1SKO GLN A 0 UNP Q9UHA4 CLONING ARTIFACT SEQADV 1SKO GLY A 1 UNP Q9UHA4 CLONING ARTIFACT SEQADV 1SKO SER A 2 UNP Q9UHA4 CLONING ARTIFACT SEQADV 1SKO MET B -6 UNP Q9JHS3 INITIATING METHIONINE SEQADV 1SKO HIS B -5 UNP Q9JHS3 EXPRESSION TAG SEQADV 1SKO HIS B -4 UNP Q9JHS3 EXPRESSION TAG SEQADV 1SKO HIS B -3 UNP Q9JHS3 EXPRESSION TAG SEQADV 1SKO HIS B -2 UNP Q9JHS3 EXPRESSION TAG SEQADV 1SKO HIS B -1 UNP Q9JHS3 EXPRESSION TAG SEQADV 1SKO HIS B 0 UNP Q9JHS3 EXPRESSION TAG SEQRES 1 A 143 MET GLY SER SER HIS HIS HIS HIS HIS HIS HIS HIS GLU SEQRES 2 A 143 ASN LEU TYR PHE GLN GLY SER ALA ASP ASP LEU LYS ARG SEQRES 3 A 143 PHE LEU TYR LYS LYS LEU PRO SER VAL GLU GLY LEU HIS SEQRES 4 A 143 ALA ILE VAL VAL SER ASP ARG ASP GLY VAL PRO VAL ILE SEQRES 5 A 143 LYS VAL ALA ASN ASP ASN ALA PRO GLU HIS ALA LEU ARG SEQRES 6 A 143 PRO GLY PHE LEU SER THR PHE ALA LEU ALA THR ASP GLN SEQRES 7 A 143 GLY SER LYS LEU GLY LEU SER LYS ASN LYS SER ILE ILE SEQRES 8 A 143 CYS TYR TYR ASN THR TYR GLN VAL VAL GLN PHE ASN ARG SEQRES 9 A 143 LEU PRO LEU VAL VAL SER PHE ILE ALA SER SER SER ALA SEQRES 10 A 143 ASN THR GLY LEU ILE VAL SER LEU GLU LYS GLU LEU ALA SEQRES 11 A 143 PRO LEU PHE GLU GLU LEU ARG GLN VAL VAL GLU VAL SER SEQRES 1 B 130 MET HIS HIS HIS HIS HIS HIS LEU ARG PRO LYS ALA LEU SEQRES 2 B 130 THR GLN VAL LEU SER GLN ALA ASN THR GLY GLY VAL GLN SEQRES 3 B 130 SER THR LEU LEU LEU ASN ASN GLU GLY SER LEU LEU ALA SEQRES 4 B 130 TYR SER GLY TYR GLY ASP THR ASP ALA ARG VAL THR ALA SEQRES 5 B 130 ALA ILE ALA SER ASN ILE TRP ALA ALA TYR ASP ARG ASN SEQRES 6 B 130 GLY ASN GLN ALA PHE ASN GLU ASP SER LEU LYS PHE ILE SEQRES 7 B 130 LEU MET ASP CYS MET GLU GLY ARG VAL ALA ILE THR ARG SEQRES 8 B 130 VAL ALA ASN LEU LEU LEU CYS MET TYR ALA LYS GLU THR SEQRES 9 B 130 VAL GLY PHE GLY MET LEU LYS ALA LYS ALA GLN ALA LEU SEQRES 10 B 130 VAL GLN TYR LEU GLU GLU PRO LEU THR GLN VAL ALA ALA FORMUL 3 HOH *230(H2 O) HELIX 1 1 GLY A 1 LEU A 14 1 14 HELIX 2 2 PRO A 15 VAL A 17 5 3 HELIX 3 3 PRO A 42 LEU A 46 5 5 HELIX 4 4 ARG A 47 SER A 62 1 16 HELIX 5 5 ASN A 100 GLU A 117 1 18 HELIX 6 6 LYS B 4 ALA B 13 1 10 HELIX 7 7 ASP B 40 ARG B 57 1 18 HELIX 8 8 GLY B 99 GLU B 115 1 17 SHEET 1 A10 PRO A 32 ALA A 37 0 SHEET 2 A10 LEU A 20 SER A 26 -1 N VAL A 25 O ILE A 34 SHEET 3 A10 LEU A 89 SER A 96 -1 O VAL A 90 N SER A 26 SHEET 4 A10 TYR A 79 ARG A 86 -1 N PHE A 84 O VAL A 91 SHEET 5 A10 ASN A 69 TYR A 76 -1 N TYR A 76 O TYR A 79 SHEET 6 A10 LEU B 68 CYS B 75 -1 O ASP B 74 N LYS A 70 SHEET 7 A10 GLY B 78 VAL B 85 -1 O GLY B 78 N CYS B 75 SHEET 8 A10 LEU B 88 ALA B 94 -1 O LEU B 88 N VAL B 85 SHEET 9 A10 VAL B 18 LEU B 24 -1 N LEU B 24 O LEU B 89 SHEET 10 A10 LEU B 30 GLY B 35 -1 O ALA B 32 N LEU B 23 CISPEP 1 LEU A 87 PRO A 88 0 17.50 CISPEP 2 LEU A 118 ARG A 119 0 -27.92 CISPEP 3 ARG B 57 ASN B 58 0 12.46 CISPEP 4 ASN B 58 GLY B 59 0 -4.85 CISPEP 5 GLY B 59 ASN B 60 0 -17.02 CISPEP 6 GLN B 61 ALA B 62 0 3.25 CISPEP 7 ALA B 62 PHE B 63 0 -16.61 CISPEP 8 GLU B 115 GLU B 116 0 25.92 CRYST1 50.974 64.193 73.280 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019618 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015578 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013646 0.00000