PDB Short entry for 1TD7
HEADER    HYDROLASE                               21-MAY-04   1TD7              
TITLE     INTERACTIONS OF A SPECIFIC NON-STEROIDAL ANTI-INFLAMMATORY            
TITLE    2 DRUG (NSAID) WITH GROUP I PHOSPHOLIPASE A2 (PLA2): CRYSTAL           
TITLE    3 STRUCTURE OF THE COMPLEX FORMED BETWEEN PLA2 AND NIFLUMIC            
TITLE    4 ACID AT 2.5 A RESOLUTION                                             
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: PHOSPHOLIPASE A2 ISOFORM 3;                                
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: PHOSPHOLIPASE A2, PHOSPHATIDYLCHOLINE 2-                    
COMPND   5 ACYLHYDROLASE;                                                       
COMPND   6 EC: 3.1.1.4                                                          
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: NAJA SAGITTIFERA;                               
SOURCE   3 ORGANISM_TAXID: 195058;                                              
SOURCE   4 SECRETION: VENOM                                                     
KEYWDS    PHOSPHOLIPASE A2, ENZYME, INHIBITOR, HYDROLASE                        
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    T.JABEEN,N.SINGH,R.K.SINGH,S.SHARMA,M.PERBANDT,C.BETZEL,              
AUTHOR   2 T.P.SINGH                                                            
REVDAT   3   24-FEB-09 1TD7    1       VERSN                                    
REVDAT   2   20-DEC-05 1TD7    1       JRNL                                     
REVDAT   1   08-JUN-04 1TD7    0                                                
JRNL        AUTH   T.JABEEN,N.SINGH,R.K.SINGH,S.SHARMA,R.K.SOMVANSHI,           
JRNL        AUTH 2 S.DEY,T.P.SINGH                                              
JRNL        TITL   NON-STEROIDAL ANTI-INFLAMMATORY DRUGS AS POTENT              
JRNL        TITL 2 INHIBITORS OF PHOSPHOLIPASE A2: STRUCTURE OF THE             
JRNL        TITL 3 COMPLEX OF PHOSPHOLIPASE A2 WITH NIFLUMIC ACID AT            
JRNL        TITL 4 2.5 ANGSTROMS RESOLUTION.                                    
JRNL        REF    ACTA CRYSTALLOGR.,SECT.D      V.  61  1579 2005              
JRNL        REFN                   ISSN 0907-4449                               
JRNL        PMID   16301791                                                     
JRNL        DOI    10.1107/S0907444905029604                                    
REMARK   1                                                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.50 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5                                             
REMARK   3   AUTHORS     : MURSHUDOV,VAGIN,DODSON                               
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 20.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.7                           
REMARK   3   NUMBER OF REFLECTIONS             : 4004                           
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.195                           
REMARK   3   R VALUE            (WORKING SET) : 0.193                           
REMARK   3   FREE R VALUE                     : 0.242                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 4.500                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 179                             
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.50                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.59                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 257                          
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 99.50                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2110                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 13                           
REMARK   3   BIN FREE R VALUE                    : 0.2330                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 914                                     
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 21                                      
REMARK   3   SOLVENT ATOMS            : 101                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 27.43                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -0.46000                                             
REMARK   3    B22 (A**2) : -0.46000                                             
REMARK   3    B33 (A**2) : 0.93000                                              
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): NULL          
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.321         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.276         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.371        
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.936                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.913                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):   960 ; 0.015 ; 0.021       
REMARK   3   BOND LENGTHS OTHERS               (A):   751 ; 0.001 ; 0.020       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  1305 ; 1.812 ; 1.964       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  1761 ; 0.932 ; 3.000       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   117 ; 2.382 ; 3.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   145 ;15.921 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   130 ; 0.100 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  1105 ; 0.005 ; 0.020       
REMARK   3   GENERAL PLANES OTHERS             (A):   204 ; 0.003 ; 0.020       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):   297 ; 0.321 ; 0.300       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):   804 ; 0.231 ; 0.300       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):   100 ; 0.172 ; 0.500       
REMARK   3   H-BOND (X...Y) OTHERS             (A):     2 ; 0.041 ; 0.500       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):    14 ; 0.289 ; 0.300       
REMARK   3   SYMMETRY VDW OTHERS               (A):    39 ; 0.305 ; 0.300       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):     4 ; 0.214 ; 0.500       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):   589 ; 0.769 ; 1.500       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):   935 ; 1.507 ; 2.000       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):   371 ; 2.060 ; 3.000       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):   370 ; 3.411 ; 4.500       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : BABINET MODEL WITH MASK                              
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.40                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE          
REMARK   3  RIDING POSITIONS                                                    
REMARK   4                                                                      
REMARK   4 1TD7 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-MAY-04.                  
REMARK 100 THE RCSB ID CODE IS RCSB022555.                                      
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 28-APR-04                          
REMARK 200  TEMPERATURE           (KELVIN) : 200                                
REMARK 200  PH                             : 6.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : EMBL/DESY, HAMBURG                 
REMARK 200  BEAMLINE                       : X11                                
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.80200                            
REMARK 200  MONOCHROMATOR                  : MIRROR                             
REMARK 200  OPTICS                         : MONOCHROMATOR                      
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : MARRESEARCH                        
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DENZO                              
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 4004                               
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.500                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 20.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.7                               
REMARK 200  DATA REDUNDANCY                : NULL                               
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : 0.06300                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 20.6000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.59                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 99.5                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : 0.23800                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 7.500                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: AMORE                                                 
REMARK 200 STARTING MODEL: 1MF4                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 41.00                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 10MM SODIUM PHOSPHATE, 2MM CACL2,        
REMARK 280  25% ETHANOL, PH 6.0, VAPOR DIFFUSION, SITTING DROP,                 
REMARK 280  TEMPERATURE 293K                                                    
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41                             
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,-Y,Z+1/2                                             
REMARK 290       3555   -Y,X,Z+1/4                                              
REMARK 290       4555   Y,-X,Z+3/4                                              
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       32.47900            
REMARK 290   SMTRY1   3  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       16.23950            
REMARK 290   SMTRY1   4  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000       48.71850            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ASP A  82       43.05    -89.39                                   
REMARK 500    ASP A 114       95.99    -64.42                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 525                                                                      
REMARK 525 SOLVENT                                                              
REMARK 525                                                                      
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT                    
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST                  
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT                 
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE                       
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;                             
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE                  
REMARK 525 NUMBER; I=INSERTION CODE):                                           
REMARK 525                                                                      
REMARK 525  M RES CSSEQI                                                        
REMARK 525    HOH A2099        DISTANCE =  5.74 ANGSTROMS                       
REMARK 525    HOH A2100        DISTANCE =  6.07 ANGSTROMS                       
REMARK 525    HOH A2101        DISTANCE =  7.56 ANGSTROMS                       
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620  (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;              
REMARK 620  SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                            
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              CA A1001  CA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 GLY A  30   O                                                      
REMARK 620 2 ASP A  49   OD2 149.2                                              
REMARK 620 3 LYS A  31   O    73.8 116.3                                        
REMARK 620 4 TYR A  28   O    90.1  68.6  70.5                                  
REMARK 620 5 GLY A  32   O   131.0  73.1  60.3  89.9                            
REMARK 620 6 ASP A  49   OD1 114.1  45.3 155.7  86.2 114.8                      
REMARK 620 7 HOH A2029   O    97.2 111.2  90.3 156.7  68.7 110.6                
REMARK 620 8 HOH A2098   O    50.3 105.1 120.1  88.2 177.7  63.9 113.3          
REMARK 620 N                    1     2     3     4     5     6     7           
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1001                 
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NFL A 2001                
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1MF4   RELATED DB: PDB                                   
REMARK 900 STRUCTURE-BASED DESIGN OF POTENT AND SELECTIVE INHIBITORS            
REMARK 900 OF PHOSPHOLIPASE A2: CRYSTAL STRUCTURE OF THE COMPLEX                
REMARK 900 FORMED BETWEEN PHOSPHOLIPASE A2 FROM NAJA NAJA SAGITTIFERA           
REMARK 900 AND A DESIGN PEPTIDE INHIBITOR AT 1.9 A RESOLUTION                   
DBREF  1TD7 A    1   120  UNP    P60045   PA23_NAJSG       8    126             
SEQRES   1 A  119  ASN LEU TYR GLN PHE LYS ASN MET ILE GLN CYS THR VAL          
SEQRES   2 A  119  PRO SER ARG SER TRP GLN ASP PHE ALA ASP TYR GLY CYS          
SEQRES   3 A  119  TYR CYS GLY LYS GLY GLY SER GLY THR PRO VAL ASP ASP          
SEQRES   4 A  119  LEU ASP ARG CYS CYS GLN VAL HIS ASP ASN CYS TYR ASN          
SEQRES   5 A  119  GLU ALA GLU ASN ILE SER GLY CYS ARG PRO TYR PHE LYS          
SEQRES   6 A  119  THR TYR SER TYR GLU CYS THR GLN GLY THR LEU THR CYS          
SEQRES   7 A  119  LYS GLY ASP ASN ASN ALA CYS ALA ALA SER VAL CYS ASP          
SEQRES   8 A  119  CYS ASP ARG LEU ALA ALA ILE CYS PHE ALA GLY ALA PRO          
SEQRES   9 A  119  TYR ASN ASP ALA ASN TYR ASN ILE ASP LEU LYS ALA ARG          
SEQRES  10 A  119  CYS ASN                                                      
HET     CA  A1001       1                                                       
HET    NFL  A2001      20                                                       
HETNAM      CA CALCIUM ION                                                      
HETNAM     NFL 2-{[3-(TRIFLUOROMETHYL)PHENYL]AMINO}NICOTINIC ACID               
HETSYN     NFL 2-[(3-TRIFLUOROMETHYL)PHENYL]AMINO-3-PYRIDINE-                   
HETSYN   2 NFL  CARBOXYLIC ACID                                                 
FORMUL   2   CA    CA 2+                                                        
FORMUL   3  NFL    C13 H9 F3 N2 O2                                              
FORMUL   4  HOH   *101(H2 O)                                                    
HELIX    1   1 ASN A    1  VAL A   13  1                                  13    
HELIX    2   2 SER A   18  ALA A   23  5                                   6    
HELIX    3   3 ASP A   39  ASN A   57  1                                  19    
HELIX    4   4 ASN A   84  ALA A  104  1                                  21    
HELIX    5   5 ASN A  107  TYR A  111  5                                   5    
HELIX    6   6 ASP A  114  CYS A  119  1                                   6    
SHEET    1   A 2 TYR A  70  THR A  73  0                                        
SHEET    2   A 2 THR A  76  CYS A  79 -1  O  THR A  78   N  GLU A  71           
SSBOND   1 CYS A   11    CYS A   72                          1555   1555  2.02  
SSBOND   2 CYS A   27    CYS A  119                          1555   1555  2.00  
SSBOND   3 CYS A   29    CYS A   45                          1555   1555  2.03  
SSBOND   4 CYS A   44    CYS A  100                          1555   1555  2.02  
SSBOND   5 CYS A   51    CYS A   93                          1555   1555  2.01  
SSBOND   6 CYS A   61    CYS A   86                          1555   1555  2.00  
SSBOND   7 CYS A   79    CYS A   91                          1555   1555  2.02  
LINK        CA    CA A1001                 O   GLY A  30     1555   1555  2.27  
LINK        CA    CA A1001                 OD2 ASP A  49     1555   1555  2.45  
LINK        CA    CA A1001                 O   LYS A  31     1555   1555  3.28  
LINK        CA    CA A1001                 O   TYR A  28     1555   1555  2.76  
LINK        CA    CA A1001                 O   GLY A  32     1555   1555  2.61  
LINK        CA    CA A1001                 OD1 ASP A  49     1555   1555  3.05  
LINK        CA    CA A1001                 O   HOH A2029     1555   1555  2.35  
LINK        CA    CA A1001                 O   HOH A2098     1555   1555  3.36  
SITE     1 AC1  6 TYR A  28  GLY A  30  LYS A  31  GLY A  32                    
SITE     2 AC1  6 ASP A  49  HOH A2029                                          
SITE     1 AC2 13 LEU A   2  PHE A   5  LYS A   6  ILE A   9                    
SITE     2 AC2 13 TRP A  19  PHE A  22  GLY A  30  TYR A  64                    
SITE     3 AC2 13 PHE A 101  HOH A2063  HOH A2098  HOH A2099                    
SITE     4 AC2 13 HOH A2100                                                     
CRYST1   42.356   42.356   64.958  90.00  90.00  90.00 P 41          4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.023609  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.023609  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.015395        0.00000