PDB Short entry for 1TU3 HEADER PROTEIN TRANSPORT 24-JUN-04 1TU3 TITLE CRYSTAL STRUCTURE OF RAB5 COMPLEX WITH RABAPTIN5 C-TERMINAL DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAS-RELATED PROTEIN RAB-5A; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: RAB GTPASE BINDING EFFECTOR PROTEIN 1; COMPND 7 CHAIN: F, G, H, I, J; COMPND 8 SYNONYM: RABAPTIN-5, RABAPTIN-5ALPHA, RABAPTIN-4; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RAB5A, RAB5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11A; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: RABEP1, RABPT5, RABPT5A; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PGEX6P-1 KEYWDS RAB5, RABAPTIN5, EFFECTOR-BINDING, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR G.ZHU,P.ZHAI,J.LIU,S.TERZYAN,G.LI,X.C.ZHANG REVDAT 3 23-AUG-23 1TU3 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 1TU3 1 VERSN REVDAT 1 05-OCT-04 1TU3 0 JRNL AUTH G.ZHU,P.ZHAI,J.LIU,S.TERZYAN,G.LI,X.C.ZHANG JRNL TITL STRUCTURAL BASIS OF RAB5-RABAPTIN5 INTERACTION IN JRNL TITL 2 ENDOCYTOSIS JRNL REF NAT.STRUCT.MOL.BIOL. V. 11 975 2004 JRNL REFN ISSN 1545-9993 JRNL PMID 15378032 JRNL DOI 10.1038/NSMB832 REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.72 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 423796.620 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 90.6 REMARK 3 NUMBER OF REFLECTIONS : 51979 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1035 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.38 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 58.10 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3321 REMARK 3 BIN R VALUE (WORKING SET) : 0.3520 REMARK 3 BIN FREE R VALUE : 0.4250 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 2.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 79 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.048 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8342 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 165 REMARK 3 SOLVENT ATOMS : 228 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 10.45000 REMARK 3 B22 (A**2) : -0.88000 REMARK 3 B33 (A**2) : -9.58000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 7.42000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM SIGMAA (A) : 0.36 REMARK 3 LOW RESOLUTION CUTOFF (A) : 6.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.41 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.44 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.100 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.770 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 4.640 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 6.610 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 6.850 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 9.120 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.30 REMARK 3 BSOL : 54.67 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : GNP.PAR REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : GNP.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1TU3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JUL-04. REMARK 100 THE DEPOSITION ID IS D_1000022903. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9186 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54048 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.37000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1N6H REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, AMMONIUM BROMIDE, MES, PH REMARK 280 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 56.20000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.75000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 56.20000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 41.75000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 81.77904 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 141.62756 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 14 REMARK 465 GLY A 15 REMARK 465 ASN A 16 REMARK 465 LYS A 17 REMARK 465 LYS A 183 REMARK 465 ASN A 184 REMARK 465 MET B 14 REMARK 465 GLY B 15 REMARK 465 ASN B 16 REMARK 465 LYS B 183 REMARK 465 ASN B 184 REMARK 465 MET C 14 REMARK 465 GLY C 15 REMARK 465 ASN C 16 REMARK 465 LYS C 17 REMARK 465 ILE C 18 REMARK 465 MET D 14 REMARK 465 GLY D 15 REMARK 465 ASN D 16 REMARK 465 LYS D 17 REMARK 465 ILE D 18 REMARK 465 CYS D 19 REMARK 465 GLN D 20 REMARK 465 PHE D 21 REMARK 465 HIS D 46 REMARK 465 GLU D 47 REMARK 465 PHE D 48 REMARK 465 LEU D 64 REMARK 465 ASP D 65 REMARK 465 LYS D 70 REMARK 465 PHE D 71 REMARK 465 GLN D 119 REMARK 465 ARG D 120 REMARK 465 GLN D 121 REMARK 465 ALA D 122 REMARK 465 SER D 123 REMARK 465 PRO D 124 REMARK 465 ASN D 125 REMARK 465 LYS D 183 REMARK 465 ASN D 184 REMARK 465 MET E 14 REMARK 465 GLY E 15 REMARK 465 LYS E 183 REMARK 465 ASN E 184 REMARK 465 GLY F 784 REMARK 465 PRO F 785 REMARK 465 LEU F 786 REMARK 465 GLY F 787 REMARK 465 SER F 788 REMARK 465 ALA F 789 REMARK 465 LYS F 790 REMARK 465 ALA F 791 REMARK 465 THR F 792 REMARK 465 VAL F 793 REMARK 465 GLU F 794 REMARK 465 GLN F 795 REMARK 465 LEU F 796 REMARK 465 MET F 797 REMARK 465 PHE F 798 REMARK 465 GLU F 799 REMARK 465 GLU F 800 REMARK 465 LYS F 801 REMARK 465 ASN F 802 REMARK 465 LYS F 803 REMARK 465 ASP F 850 REMARK 465 THR F 851 REMARK 465 LYS F 852 REMARK 465 LEU F 853 REMARK 465 THR F 854 REMARK 465 ASP F 855 REMARK 465 ILE F 856 REMARK 465 ASN F 857 REMARK 465 GLN F 858 REMARK 465 LEU F 859 REMARK 465 PRO F 860 REMARK 465 GLU F 861 REMARK 465 THR F 862 REMARK 465 GLY G 784 REMARK 465 PRO G 785 REMARK 465 LEU G 786 REMARK 465 GLY G 787 REMARK 465 SER G 788 REMARK 465 ALA G 789 REMARK 465 LYS G 790 REMARK 465 ALA G 791 REMARK 465 THR G 792 REMARK 465 VAL G 793 REMARK 465 GLU G 794 REMARK 465 GLN G 795 REMARK 465 LEU G 796 REMARK 465 MET G 797 REMARK 465 PHE G 798 REMARK 465 GLU G 799 REMARK 465 GLU G 800 REMARK 465 LYS G 801 REMARK 465 LEU G 853 REMARK 465 THR G 854 REMARK 465 ASP G 855 REMARK 465 ILE G 856 REMARK 465 ASN G 857 REMARK 465 GLN G 858 REMARK 465 LEU G 859 REMARK 465 PRO G 860 REMARK 465 GLU G 861 REMARK 465 THR G 862 REMARK 465 GLY H 784 REMARK 465 PRO H 785 REMARK 465 LEU H 786 REMARK 465 GLY H 787 REMARK 465 SER H 788 REMARK 465 ALA H 789 REMARK 465 LYS H 790 REMARK 465 ALA H 791 REMARK 465 THR H 792 REMARK 465 VAL H 793 REMARK 465 GLU H 794 REMARK 465 GLN H 795 REMARK 465 LEU H 796 REMARK 465 MET H 797 REMARK 465 PHE H 798 REMARK 465 GLU H 799 REMARK 465 GLU H 800 REMARK 465 LYS H 801 REMARK 465 ASN H 802 REMARK 465 LYS H 803 REMARK 465 ALA H 804 REMARK 465 GLN H 805 REMARK 465 ASP H 850 REMARK 465 THR H 851 REMARK 465 LYS H 852 REMARK 465 LEU H 853 REMARK 465 THR H 854 REMARK 465 ASP H 855 REMARK 465 ILE H 856 REMARK 465 ASN H 857 REMARK 465 GLN H 858 REMARK 465 LEU H 859 REMARK 465 PRO H 860 REMARK 465 GLU H 861 REMARK 465 THR H 862 REMARK 465 GLY I 784 REMARK 465 PRO I 785 REMARK 465 LEU I 786 REMARK 465 GLY I 787 REMARK 465 SER I 788 REMARK 465 ALA I 789 REMARK 465 LYS I 790 REMARK 465 ALA I 791 REMARK 465 THR I 792 REMARK 465 VAL I 793 REMARK 465 GLU I 794 REMARK 465 GLN I 795 REMARK 465 LEU I 796 REMARK 465 MET I 797 REMARK 465 PHE I 798 REMARK 465 GLU I 799 REMARK 465 GLU I 800 REMARK 465 LYS I 801 REMARK 465 ASN I 802 REMARK 465 LYS I 803 REMARK 465 ASP I 839 REMARK 465 SER I 840 REMARK 465 THR I 851 REMARK 465 LYS I 852 REMARK 465 LEU I 853 REMARK 465 THR I 854 REMARK 465 ASP I 855 REMARK 465 ILE I 856 REMARK 465 ASN I 857 REMARK 465 GLN I 858 REMARK 465 LEU I 859 REMARK 465 PRO I 860 REMARK 465 GLU I 861 REMARK 465 THR I 862 REMARK 465 GLY J 784 REMARK 465 PRO J 785 REMARK 465 LEU J 786 REMARK 465 GLY J 787 REMARK 465 SER J 788 REMARK 465 ALA J 789 REMARK 465 LYS J 790 REMARK 465 ALA J 791 REMARK 465 THR J 792 REMARK 465 VAL J 793 REMARK 465 GLU J 794 REMARK 465 GLN J 795 REMARK 465 LEU J 796 REMARK 465 MET J 797 REMARK 465 PHE J 798 REMARK 465 GLU J 799 REMARK 465 GLU J 800 REMARK 465 LYS J 801 REMARK 465 ASP J 855 REMARK 465 ILE J 856 REMARK 465 ASN J 857 REMARK 465 GLN J 858 REMARK 465 LEU J 859 REMARK 465 PRO J 860 REMARK 465 GLU J 861 REMARK 465 THR J 862 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 442 O HOH D 581 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 30 10.29 82.97 REMARK 500 LEU A 64 -79.78 -47.29 REMARK 500 ASP A 65 -24.93 -149.32 REMARK 500 ASP A 66 39.40 -159.51 REMARK 500 THR A 67 133.31 -178.59 REMARK 500 ILE A 102 -2.14 -59.26 REMARK 500 LEU A 137 43.80 -95.69 REMARK 500 MET A 160 115.96 -172.65 REMARK 500 ALA B 30 20.54 80.34 REMARK 500 ALA B 55 160.90 175.11 REMARK 500 ASP B 65 -46.53 -175.37 REMARK 500 LYS B 134 38.71 73.27 REMARK 500 LEU B 137 30.44 -96.13 REMARK 500 MET B 160 126.08 178.49 REMARK 500 PHE C 48 71.91 -114.76 REMARK 500 ILE C 53 -79.09 -71.45 REMARK 500 GLN C 60 115.89 -178.50 REMARK 500 LEU C 64 -95.23 -83.54 REMARK 500 ASP C 65 -137.71 -76.89 REMARK 500 ASN C 125 46.10 -102.05 REMARK 500 ALA C 142 -5.67 -148.12 REMARK 500 MET C 160 111.34 175.94 REMARK 500 ASN C 169 5.85 57.77 REMARK 500 PRO C 182 -90.13 -81.39 REMARK 500 LYS C 183 -129.79 55.77 REMARK 500 GLN D 60 95.86 -169.04 REMARK 500 THR D 68 62.28 -153.95 REMARK 500 SER D 84 -8.81 -59.28 REMARK 500 ARG D 141 54.20 -146.88 REMARK 500 SER D 150 -71.58 -52.83 REMARK 500 SER D 156 68.20 66.03 REMARK 500 MET D 160 111.00 175.03 REMARK 500 LYS D 165 -83.06 -57.46 REMARK 500 SER D 167 19.07 82.82 REMARK 500 ASN D 169 8.04 58.74 REMARK 500 VAL D 170 -73.01 -62.10 REMARK 500 ALA E 30 31.49 81.97 REMARK 500 ILE E 102 -10.39 -49.82 REMARK 500 LEU E 137 44.68 -81.33 REMARK 500 ALA E 138 8.62 -67.11 REMARK 500 GLU F 842 -71.32 -59.18 REMARK 500 LEU F 848 9.28 -69.24 REMARK 500 GLN G 805 -79.10 -80.35 REMARK 500 ASP G 850 -152.63 -66.25 REMARK 500 GLN H 837 63.36 -102.67 REMARK 500 ASP H 839 -94.14 -80.30 REMARK 500 SER H 840 -158.66 -134.03 REMARK 500 ILE H 844 20.07 -70.31 REMARK 500 LEU H 848 -71.67 -55.12 REMARK 500 SER J 840 147.05 -178.91 REMARK 500 REMARK 500 THIS ENTRY HAS 52 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR D 90 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 34 OG REMARK 620 2 THR A 52 OG1 75.1 REMARK 620 3 HOH A 404 O 84.2 84.7 REMARK 620 4 HOH A 405 O 83.2 84.4 165.0 REMARK 620 5 GNP A1202 O2G 155.1 80.4 97.7 90.5 REMARK 620 6 GNP A1202 O2B 104.9 177.8 93.1 97.9 99.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B2201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 34 OG REMARK 620 2 THR B 52 OG1 91.3 REMARK 620 3 HOH B 420 O 101.6 87.1 REMARK 620 4 HOH B 421 O 80.3 84.6 171.6 REMARK 620 5 GNP B2202 O2G 171.5 81.6 82.8 94.3 REMARK 620 6 GNP B2202 O2B 91.5 169.2 102.5 85.5 94.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C3201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER C 34 OG REMARK 620 2 THR C 52 OG1 80.8 REMARK 620 3 HOH C 431 O 84.0 100.2 REMARK 620 4 HOH C 432 O 95.5 87.5 172.1 REMARK 620 5 GNP C3202 O2G 166.3 85.8 95.5 86.9 REMARK 620 6 GNP C3202 O2B 98.9 175.8 84.0 88.4 94.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D4201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER D 34 OG REMARK 620 2 THR D 52 OG1 71.2 REMARK 620 3 HOH D 440 O 88.4 90.7 REMARK 620 4 HOH D 441 O 73.5 72.5 158.3 REMARK 620 5 GNP D4202 O2B 92.3 159.5 101.2 91.6 REMARK 620 6 GNP D4202 O2G 161.7 91.1 87.5 105.8 106.0 REMARK 620 7 GNP D4202 N3B 138.5 133.0 118.8 82.8 54.2 57.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E5201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER E 34 OG REMARK 620 2 THR E 52 OG1 90.1 REMARK 620 3 HOH E 450 O 102.5 97.5 REMARK 620 4 HOH E 451 O 84.5 78.7 172.2 REMARK 620 5 GNP E5202 O2B 98.3 166.7 90.7 91.8 REMARK 620 6 GNP E5202 O2G 168.6 83.6 87.9 85.0 86.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 2201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 3201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 4201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG E 5201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNP A 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNP B 2202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNP C 3202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNP D 4202 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNP E 5202 DBREF 1TU3 A 15 184 UNP P20339 RAB5A_HUMAN 15 184 DBREF 1TU3 B 15 184 UNP P20339 RAB5A_HUMAN 15 184 DBREF 1TU3 C 15 184 UNP P20339 RAB5A_HUMAN 15 184 DBREF 1TU3 D 15 184 UNP P20339 RAB5A_HUMAN 15 184 DBREF 1TU3 E 15 184 UNP P20339 RAB5A_HUMAN 15 184 DBREF 1TU3 F 789 862 UNP Q15276 RABE1_HUMAN 789 862 DBREF 1TU3 G 789 862 UNP Q15276 RABE1_HUMAN 789 862 DBREF 1TU3 H 789 862 UNP Q15276 RABE1_HUMAN 789 862 DBREF 1TU3 I 789 862 UNP Q15276 RABE1_HUMAN 789 862 DBREF 1TU3 J 789 862 UNP Q15276 RABE1_HUMAN 789 862 SEQADV 1TU3 MET A 14 UNP P20339 CLONING ARTIFACT SEQADV 1TU3 MET B 14 UNP P20339 CLONING ARTIFACT SEQADV 1TU3 MET C 14 UNP P20339 CLONING ARTIFACT SEQADV 1TU3 MET D 14 UNP P20339 CLONING ARTIFACT SEQADV 1TU3 MET E 14 UNP P20339 CLONING ARTIFACT SEQADV 1TU3 GLY F 784 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 PRO F 785 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 LEU F 786 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 GLY F 787 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 SER F 788 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 GLY G 784 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 PRO G 785 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 LEU G 786 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 GLY G 787 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 SER G 788 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 GLY H 784 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 PRO H 785 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 LEU H 786 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 GLY H 787 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 SER H 788 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 GLY I 784 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 PRO I 785 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 LEU I 786 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 GLY I 787 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 SER I 788 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 GLY J 784 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 PRO J 785 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 LEU J 786 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 GLY J 787 UNP Q15276 CLONING ARTIFACT SEQADV 1TU3 SER J 788 UNP Q15276 CLONING ARTIFACT SEQRES 1 A 171 MET GLY ASN LYS ILE CYS GLN PHE LYS LEU VAL LEU LEU SEQRES 2 A 171 GLY GLU SER ALA VAL GLY LYS SER SER LEU VAL LEU ARG SEQRES 3 A 171 PHE VAL LYS GLY GLN PHE HIS GLU PHE GLN GLU SER THR SEQRES 4 A 171 ILE GLY ALA ALA PHE LEU THR GLN THR VAL CYS LEU ASP SEQRES 5 A 171 ASP THR THR VAL LYS PHE GLU ILE TRP ASP THR ALA GLY SEQRES 6 A 171 GLN GLU ARG TYR HIS SER LEU ALA PRO MET TYR TYR ARG SEQRES 7 A 171 GLY ALA GLN ALA ALA ILE VAL VAL TYR ASP ILE THR ASN SEQRES 8 A 171 GLU GLU SER PHE ALA ARG ALA LYS ASN TRP VAL LYS GLU SEQRES 9 A 171 LEU GLN ARG GLN ALA SER PRO ASN ILE VAL ILE ALA LEU SEQRES 10 A 171 SER GLY ASN LYS ALA ASP LEU ALA ASN LYS ARG ALA VAL SEQRES 11 A 171 ASP PHE GLN GLU ALA GLN SER TYR ALA ASP ASP ASN SER SEQRES 12 A 171 LEU LEU PHE MET GLU THR SER ALA LYS THR SER MET ASN SEQRES 13 A 171 VAL ASN GLU ILE PHE MET ALA ILE ALA LYS LYS LEU PRO SEQRES 14 A 171 LYS ASN SEQRES 1 B 171 MET GLY ASN LYS ILE CYS GLN PHE LYS LEU VAL LEU LEU SEQRES 2 B 171 GLY GLU SER ALA VAL GLY LYS SER SER LEU VAL LEU ARG SEQRES 3 B 171 PHE VAL LYS GLY GLN PHE HIS GLU PHE GLN GLU SER THR SEQRES 4 B 171 ILE GLY ALA ALA PHE LEU THR GLN THR VAL CYS LEU ASP SEQRES 5 B 171 ASP THR THR VAL LYS PHE GLU ILE TRP ASP THR ALA GLY SEQRES 6 B 171 GLN GLU ARG TYR HIS SER LEU ALA PRO MET TYR TYR ARG SEQRES 7 B 171 GLY ALA GLN ALA ALA ILE VAL VAL TYR ASP ILE THR ASN SEQRES 8 B 171 GLU GLU SER PHE ALA ARG ALA LYS ASN TRP VAL LYS GLU SEQRES 9 B 171 LEU GLN ARG GLN ALA SER PRO ASN ILE VAL ILE ALA LEU SEQRES 10 B 171 SER GLY ASN LYS ALA ASP LEU ALA ASN LYS ARG ALA VAL SEQRES 11 B 171 ASP PHE GLN GLU ALA GLN SER TYR ALA ASP ASP ASN SER SEQRES 12 B 171 LEU LEU PHE MET GLU THR SER ALA LYS THR SER MET ASN SEQRES 13 B 171 VAL ASN GLU ILE PHE MET ALA ILE ALA LYS LYS LEU PRO SEQRES 14 B 171 LYS ASN SEQRES 1 C 171 MET GLY ASN LYS ILE CYS GLN PHE LYS LEU VAL LEU LEU SEQRES 2 C 171 GLY GLU SER ALA VAL GLY LYS SER SER LEU VAL LEU ARG SEQRES 3 C 171 PHE VAL LYS GLY GLN PHE HIS GLU PHE GLN GLU SER THR SEQRES 4 C 171 ILE GLY ALA ALA PHE LEU THR GLN THR VAL CYS LEU ASP SEQRES 5 C 171 ASP THR THR VAL LYS PHE GLU ILE TRP ASP THR ALA GLY SEQRES 6 C 171 GLN GLU ARG TYR HIS SER LEU ALA PRO MET TYR TYR ARG SEQRES 7 C 171 GLY ALA GLN ALA ALA ILE VAL VAL TYR ASP ILE THR ASN SEQRES 8 C 171 GLU GLU SER PHE ALA ARG ALA LYS ASN TRP VAL LYS GLU SEQRES 9 C 171 LEU GLN ARG GLN ALA SER PRO ASN ILE VAL ILE ALA LEU SEQRES 10 C 171 SER GLY ASN LYS ALA ASP LEU ALA ASN LYS ARG ALA VAL SEQRES 11 C 171 ASP PHE GLN GLU ALA GLN SER TYR ALA ASP ASP ASN SER SEQRES 12 C 171 LEU LEU PHE MET GLU THR SER ALA LYS THR SER MET ASN SEQRES 13 C 171 VAL ASN GLU ILE PHE MET ALA ILE ALA LYS LYS LEU PRO SEQRES 14 C 171 LYS ASN SEQRES 1 D 171 MET GLY ASN LYS ILE CYS GLN PHE LYS LEU VAL LEU LEU SEQRES 2 D 171 GLY GLU SER ALA VAL GLY LYS SER SER LEU VAL LEU ARG SEQRES 3 D 171 PHE VAL LYS GLY GLN PHE HIS GLU PHE GLN GLU SER THR SEQRES 4 D 171 ILE GLY ALA ALA PHE LEU THR GLN THR VAL CYS LEU ASP SEQRES 5 D 171 ASP THR THR VAL LYS PHE GLU ILE TRP ASP THR ALA GLY SEQRES 6 D 171 GLN GLU ARG TYR HIS SER LEU ALA PRO MET TYR TYR ARG SEQRES 7 D 171 GLY ALA GLN ALA ALA ILE VAL VAL TYR ASP ILE THR ASN SEQRES 8 D 171 GLU GLU SER PHE ALA ARG ALA LYS ASN TRP VAL LYS GLU SEQRES 9 D 171 LEU GLN ARG GLN ALA SER PRO ASN ILE VAL ILE ALA LEU SEQRES 10 D 171 SER GLY ASN LYS ALA ASP LEU ALA ASN LYS ARG ALA VAL SEQRES 11 D 171 ASP PHE GLN GLU ALA GLN SER TYR ALA ASP ASP ASN SER SEQRES 12 D 171 LEU LEU PHE MET GLU THR SER ALA LYS THR SER MET ASN SEQRES 13 D 171 VAL ASN GLU ILE PHE MET ALA ILE ALA LYS LYS LEU PRO SEQRES 14 D 171 LYS ASN SEQRES 1 E 171 MET GLY ASN LYS ILE CYS GLN PHE LYS LEU VAL LEU LEU SEQRES 2 E 171 GLY GLU SER ALA VAL GLY LYS SER SER LEU VAL LEU ARG SEQRES 3 E 171 PHE VAL LYS GLY GLN PHE HIS GLU PHE GLN GLU SER THR SEQRES 4 E 171 ILE GLY ALA ALA PHE LEU THR GLN THR VAL CYS LEU ASP SEQRES 5 E 171 ASP THR THR VAL LYS PHE GLU ILE TRP ASP THR ALA GLY SEQRES 6 E 171 GLN GLU ARG TYR HIS SER LEU ALA PRO MET TYR TYR ARG SEQRES 7 E 171 GLY ALA GLN ALA ALA ILE VAL VAL TYR ASP ILE THR ASN SEQRES 8 E 171 GLU GLU SER PHE ALA ARG ALA LYS ASN TRP VAL LYS GLU SEQRES 9 E 171 LEU GLN ARG GLN ALA SER PRO ASN ILE VAL ILE ALA LEU SEQRES 10 E 171 SER GLY ASN LYS ALA ASP LEU ALA ASN LYS ARG ALA VAL SEQRES 11 E 171 ASP PHE GLN GLU ALA GLN SER TYR ALA ASP ASP ASN SER SEQRES 12 E 171 LEU LEU PHE MET GLU THR SER ALA LYS THR SER MET ASN SEQRES 13 E 171 VAL ASN GLU ILE PHE MET ALA ILE ALA LYS LYS LEU PRO SEQRES 14 E 171 LYS ASN SEQRES 1 F 79 GLY PRO LEU GLY SER ALA LYS ALA THR VAL GLU GLN LEU SEQRES 2 F 79 MET PHE GLU GLU LYS ASN LYS ALA GLN ARG LEU GLN THR SEQRES 3 F 79 GLU LEU ASP VAL SER GLU GLN VAL GLN ARG ASP PHE VAL SEQRES 4 F 79 LYS LEU SER GLN THR LEU GLN VAL GLN LEU GLU ARG ILE SEQRES 5 F 79 ARG GLN ALA ASP SER LEU GLU ARG ILE ARG ALA ILE LEU SEQRES 6 F 79 ASN ASP THR LYS LEU THR ASP ILE ASN GLN LEU PRO GLU SEQRES 7 F 79 THR SEQRES 1 G 79 GLY PRO LEU GLY SER ALA LYS ALA THR VAL GLU GLN LEU SEQRES 2 G 79 MET PHE GLU GLU LYS ASN LYS ALA GLN ARG LEU GLN THR SEQRES 3 G 79 GLU LEU ASP VAL SER GLU GLN VAL GLN ARG ASP PHE VAL SEQRES 4 G 79 LYS LEU SER GLN THR LEU GLN VAL GLN LEU GLU ARG ILE SEQRES 5 G 79 ARG GLN ALA ASP SER LEU GLU ARG ILE ARG ALA ILE LEU SEQRES 6 G 79 ASN ASP THR LYS LEU THR ASP ILE ASN GLN LEU PRO GLU SEQRES 7 G 79 THR SEQRES 1 H 79 GLY PRO LEU GLY SER ALA LYS ALA THR VAL GLU GLN LEU SEQRES 2 H 79 MET PHE GLU GLU LYS ASN LYS ALA GLN ARG LEU GLN THR SEQRES 3 H 79 GLU LEU ASP VAL SER GLU GLN VAL GLN ARG ASP PHE VAL SEQRES 4 H 79 LYS LEU SER GLN THR LEU GLN VAL GLN LEU GLU ARG ILE SEQRES 5 H 79 ARG GLN ALA ASP SER LEU GLU ARG ILE ARG ALA ILE LEU SEQRES 6 H 79 ASN ASP THR LYS LEU THR ASP ILE ASN GLN LEU PRO GLU SEQRES 7 H 79 THR SEQRES 1 I 79 GLY PRO LEU GLY SER ALA LYS ALA THR VAL GLU GLN LEU SEQRES 2 I 79 MET PHE GLU GLU LYS ASN LYS ALA GLN ARG LEU GLN THR SEQRES 3 I 79 GLU LEU ASP VAL SER GLU GLN VAL GLN ARG ASP PHE VAL SEQRES 4 I 79 LYS LEU SER GLN THR LEU GLN VAL GLN LEU GLU ARG ILE SEQRES 5 I 79 ARG GLN ALA ASP SER LEU GLU ARG ILE ARG ALA ILE LEU SEQRES 6 I 79 ASN ASP THR LYS LEU THR ASP ILE ASN GLN LEU PRO GLU SEQRES 7 I 79 THR SEQRES 1 J 79 GLY PRO LEU GLY SER ALA LYS ALA THR VAL GLU GLN LEU SEQRES 2 J 79 MET PHE GLU GLU LYS ASN LYS ALA GLN ARG LEU GLN THR SEQRES 3 J 79 GLU LEU ASP VAL SER GLU GLN VAL GLN ARG ASP PHE VAL SEQRES 4 J 79 LYS LEU SER GLN THR LEU GLN VAL GLN LEU GLU ARG ILE SEQRES 5 J 79 ARG GLN ALA ASP SER LEU GLU ARG ILE ARG ALA ILE LEU SEQRES 6 J 79 ASN ASP THR LYS LEU THR ASP ILE ASN GLN LEU PRO GLU SEQRES 7 J 79 THR HET MG A1201 1 HET GNP A1202 32 HET MG B2201 1 HET GNP B2202 32 HET MG C3201 1 HET GNP C3202 32 HET MG D4201 1 HET GNP D4202 32 HET MG E5201 1 HET GNP E5202 32 HETNAM MG MAGNESIUM ION HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER FORMUL 11 MG 5(MG 2+) FORMUL 12 GNP 5(C10 H17 N6 O13 P3) FORMUL 21 HOH *228(H2 O) HELIX 1 1 GLY A 32 GLY A 43 1 12 HELIX 2 2 GLN A 79 SER A 84 5 6 HELIX 3 3 LEU A 85 ARG A 91 1 7 HELIX 4 4 ASN A 104 ALA A 122 1 19 HELIX 5 5 LYS A 134 ARG A 141 5 8 HELIX 6 6 ASP A 144 ASN A 155 1 12 HELIX 7 7 ASN A 169 LEU A 181 1 13 HELIX 8 8 GLY B 32 GLY B 43 1 12 HELIX 9 9 GLN B 79 LEU B 85 5 7 HELIX 10 10 ALA B 86 ARG B 91 1 6 HELIX 11 11 GLU B 105 ALA B 122 1 18 HELIX 12 12 ALA B 135 ARG B 141 5 7 HELIX 13 13 ASP B 144 ASN B 155 1 12 HELIX 14 14 ASN B 169 LEU B 181 1 13 HELIX 15 15 GLY C 32 LYS C 42 1 11 HELIX 16 16 GLN C 79 LEU C 85 5 7 HELIX 17 17 ALA C 86 ARG C 91 1 6 HELIX 18 18 ASN C 104 ALA C 122 1 19 HELIX 19 19 ASP C 144 ASN C 155 1 12 HELIX 20 20 ASN C 169 LEU C 181 1 13 HELIX 21 21 GLY D 32 LYS D 42 1 11 HELIX 22 22 GLN D 79 TYR D 89 5 11 HELIX 23 23 ASN D 104 LEU D 118 1 15 HELIX 24 24 ASP D 144 ASN D 155 1 12 HELIX 25 25 ASN D 169 LYS D 179 1 11 HELIX 26 26 GLY E 32 GLY E 43 1 12 HELIX 27 27 GLN E 79 LEU E 85 5 7 HELIX 28 28 ALA E 86 ARG E 91 1 6 HELIX 29 29 ASN E 104 ALA E 122 1 19 HELIX 30 30 LYS E 134 ALA E 138 5 5 HELIX 31 31 ASP E 144 ASN E 155 1 12 HELIX 32 32 ASN E 169 LEU E 181 1 13 HELIX 33 33 ALA F 804 GLN F 837 1 34 HELIX 34 34 SER F 840 LEU F 848 1 9 HELIX 35 35 ASN G 802 ALA G 838 1 37 HELIX 36 36 SER G 840 LEU G 848 1 9 HELIX 37 37 ARG H 806 GLN H 837 1 32 HELIX 38 38 GLU H 842 ILE H 847 1 6 HELIX 39 39 ARG I 806 ARG I 836 1 31 HELIX 40 40 LEU I 841 LEU I 848 1 8 HELIX 41 41 LEU J 807 GLN J 837 1 31 HELIX 42 42 SER J 840 ASN J 849 1 10 SHEET 1 A 6 ALA A 55 CYS A 63 0 SHEET 2 A 6 THR A 68 THR A 76 -1 O ASP A 75 N ALA A 56 SHEET 3 A 6 CYS A 19 LEU A 26 1 N LEU A 23 O GLU A 72 SHEET 4 A 6 ALA A 95 ASP A 101 1 O ILE A 97 N LEU A 26 SHEET 5 A 6 VAL A 127 ASN A 133 1 O SER A 131 N VAL A 98 SHEET 6 A 6 LEU A 158 GLU A 161 1 O LEU A 158 N ILE A 128 SHEET 1 B 6 ALA B 55 CYS B 63 0 SHEET 2 B 6 THR B 68 THR B 76 -1 O PHE B 71 N GLN B 60 SHEET 3 B 6 ILE B 18 LEU B 26 1 N PHE B 21 O GLU B 72 SHEET 4 B 6 ALA B 95 ASP B 101 1 O VAL B 99 N LEU B 26 SHEET 5 B 6 VAL B 127 ASN B 133 1 O ALA B 129 N VAL B 98 SHEET 6 B 6 LEU B 158 THR B 162 1 O LEU B 158 N LEU B 130 SHEET 1 C 3 ALA C 55 LEU C 58 0 SHEET 2 C 3 THR C 68 THR C 76 -1 O ASP C 75 N ALA C 56 SHEET 3 C 3 THR C 61 CYS C 63 -1 N VAL C 62 O VAL C 69 SHEET 1 D 6 ALA C 55 LEU C 58 0 SHEET 2 D 6 THR C 68 THR C 76 -1 O ASP C 75 N ALA C 56 SHEET 3 D 6 PHE C 21 LEU C 26 1 N LEU C 23 O GLU C 72 SHEET 4 D 6 ALA C 95 ASP C 101 1 O VAL C 99 N LEU C 26 SHEET 5 D 6 VAL C 127 ASN C 133 1 O ALA C 129 N VAL C 98 SHEET 6 D 6 MET C 160 GLU C 161 1 O MET C 160 N LEU C 130 SHEET 1 E 5 ALA D 55 LEU D 58 0 SHEET 2 E 5 ILE D 73 THR D 76 -1 O ILE D 73 N LEU D 58 SHEET 3 E 5 LEU D 23 LEU D 26 1 N LEU D 23 O TRP D 74 SHEET 4 E 5 ALA D 95 ASP D 101 1 O ILE D 97 N LEU D 26 SHEET 5 E 5 VAL D 127 ASN D 133 1 O ALA D 129 N VAL D 98 SHEET 1 F 6 ALA E 55 CYS E 63 0 SHEET 2 F 6 THR E 68 THR E 76 -1 O VAL E 69 N VAL E 62 SHEET 3 F 6 ILE E 18 LEU E 26 1 N LEU E 23 O GLU E 72 SHEET 4 F 6 ALA E 95 ASP E 101 1 O VAL E 99 N LEU E 26 SHEET 5 F 6 VAL E 127 ASN E 133 1 O ALA E 129 N VAL E 98 SHEET 6 F 6 LEU E 158 GLU E 161 1 O LEU E 158 N LEU E 130 LINK OG SER A 34 MG MG A1201 1555 1555 2.28 LINK OG1 THR A 52 MG MG A1201 1555 1555 2.22 LINK O HOH A 404 MG MG A1201 1555 1555 2.02 LINK O HOH A 405 MG MG A1201 1555 1555 2.02 LINK MG MG A1201 O2G GNP A1202 1555 1555 2.03 LINK MG MG A1201 O2B GNP A1202 1555 1555 1.88 LINK OG SER B 34 MG MG B2201 1555 1555 2.03 LINK OG1 THR B 52 MG MG B2201 1555 1555 1.98 LINK O HOH B 420 MG MG B2201 1555 1555 1.99 LINK O HOH B 421 MG MG B2201 1555 1555 1.95 LINK MG MG B2201 O2G GNP B2202 1555 1555 2.15 LINK MG MG B2201 O2B GNP B2202 1555 1555 1.90 LINK OG SER C 34 MG MG C3201 1555 1555 2.19 LINK OG1 THR C 52 MG MG C3201 1555 1555 1.98 LINK O HOH C 431 MG MG C3201 1555 1555 2.48 LINK O HOH C 432 MG MG C3201 1555 1555 2.17 LINK MG MG C3201 O2G GNP C3202 1555 1555 2.13 LINK MG MG C3201 O2B GNP C3202 1555 1555 2.02 LINK OG SER D 34 MG MG D4201 1555 1555 2.10 LINK OG1 THR D 52 MG MG D4201 1555 1555 2.37 LINK O HOH D 440 MG MG D4201 1555 1555 2.07 LINK O HOH D 441 MG MG D4201 1555 1555 2.16 LINK MG MG D4201 O2B GNP D4202 1555 1555 1.90 LINK MG MG D4201 O2G GNP D4202 1555 1555 1.96 LINK MG MG D4201 N3B GNP D4202 1555 1555 3.13 LINK OG SER E 34 MG MG E5201 1555 1555 1.75 LINK OG1 THR E 52 MG MG E5201 1555 1555 2.05 LINK O HOH E 450 MG MG E5201 1555 1555 2.14 LINK O HOH E 451 MG MG E5201 1555 1555 2.40 LINK MG MG E5201 O2B GNP E5202 1555 1555 1.98 LINK MG MG E5201 O2G GNP E5202 1555 1555 2.15 SITE 1 AC1 5 SER A 34 THR A 52 HOH A 404 HOH A 405 SITE 2 AC1 5 GNP A1202 SITE 1 AC2 5 SER B 34 THR B 52 HOH B 420 HOH B 421 SITE 2 AC2 5 GNP B2202 SITE 1 AC3 5 SER C 34 THR C 52 HOH C 431 HOH C 432 SITE 2 AC3 5 GNP C3202 SITE 1 AC4 5 SER D 34 THR D 52 HOH D 440 HOH D 441 SITE 2 AC4 5 GNP D4202 SITE 1 AC5 5 SER E 34 THR E 52 HOH E 450 HOH E 451 SITE 2 AC5 5 GNP E5202 SITE 1 AC6 27 SER A 29 ALA A 30 VAL A 31 GLY A 32 SITE 2 AC6 27 LYS A 33 SER A 34 SER A 35 PHE A 45 SITE 3 AC6 27 HIS A 46 GLU A 47 GLN A 49 GLU A 50 SITE 4 AC6 27 SER A 51 THR A 52 GLY A 78 ASN A 133 SITE 5 AC6 27 LYS A 134 ASP A 136 LEU A 137 SER A 163 SITE 6 AC6 27 ALA A 164 LYS A 165 HOH A 403 HOH A 404 SITE 7 AC6 27 HOH A 405 HOH A 592 MG A1201 SITE 1 AC7 24 SER B 29 ALA B 30 VAL B 31 GLY B 32 SITE 2 AC7 24 LYS B 33 SER B 34 SER B 35 PHE B 45 SITE 3 AC7 24 HIS B 46 GLU B 47 GLN B 49 SER B 51 SITE 4 AC7 24 THR B 52 GLY B 78 ASN B 133 LYS B 134 SITE 5 AC7 24 ASP B 136 LEU B 137 SER B 163 ALA B 164 SITE 6 AC7 24 LYS B 165 HOH B 420 HOH B 421 MG B2201 SITE 1 AC8 23 SER C 29 ALA C 30 VAL C 31 GLY C 32 SITE 2 AC8 23 LYS C 33 SER C 34 SER C 35 PHE C 45 SITE 3 AC8 23 HIS C 46 GLU C 47 GLN C 49 SER C 51 SITE 4 AC8 23 THR C 52 GLY C 78 ASN C 133 LYS C 134 SITE 5 AC8 23 ASP C 136 SER C 163 ALA C 164 LYS C 165 SITE 6 AC8 23 HOH C 431 HOH C 432 MG C3201 SITE 1 AC9 24 SER D 29 ALA D 30 VAL D 31 GLY D 32 SITE 2 AC9 24 LYS D 33 SER D 34 SER D 35 PHE D 45 SITE 3 AC9 24 GLN D 49 GLU D 50 SER D 51 THR D 52 SITE 4 AC9 24 GLY D 78 ASN D 133 LYS D 134 ASP D 136 SITE 5 AC9 24 LEU D 137 SER D 163 ALA D 164 LYS D 165 SITE 6 AC9 24 HOH D 440 HOH D 441 HOH D 442 MG D4201 SITE 1 BC1 25 SER E 29 ALA E 30 VAL E 31 GLY E 32 SITE 2 BC1 25 LYS E 33 SER E 34 SER E 35 PHE E 45 SITE 3 BC1 25 HIS E 46 GLU E 47 GLN E 49 SER E 51 SITE 4 BC1 25 THR E 52 GLY E 78 ASN E 133 LYS E 134 SITE 5 BC1 25 ASP E 136 LEU E 137 SER E 163 ALA E 164 SITE 6 BC1 25 LYS E 165 HOH E 450 HOH E 451 HOH E 454 SITE 7 BC1 25 MG E5201 CRYST1 112.400 83.500 144.900 90.00 102.20 90.00 C 1 2 1 20 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008893 0.000000 0.001920 0.00000 SCALE2 0.000000 0.011979 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007062 0.00000