PDB Short entry for 1TZC HEADER ISOMERASE 09-JUL-04 1TZC TITLE CRYSTAL STRUCTURE OF PHOSPHOGLUCOSE/PHOSPHOMANNOSE ISOMERASE FROM TITLE 2 PYROBACULUM AEROPHILUM IN COMPLEX WITH 5-PHOSPHOARABINONATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSE-6-PHOSPHATE ISOMERASE, CONJECTURAL; COMPND 3 CHAIN: A, B; COMPND 4 EC: 5.3.1.9, 5.3.1.8; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROBACULUM AEROPHILUM; SOURCE 3 ORGANISM_TAXID: 178306; SOURCE 4 STRAIN: STR. IM2; SOURCE 5 GENE: PAE1610; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: JM109; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET17B KEYWDS ENZYME, CRENARCHAEON, HYPERTHERMOPHILE, PGI FAMILY, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.K.SWAN,T.HANSEN,P.SCHOENHEIT,C.DAVIES REVDAT 7 03-APR-24 1TZC 1 REMARK REVDAT 6 14-FEB-24 1TZC 1 REMARK REVDAT 5 11-OCT-17 1TZC 1 REMARK REVDAT 4 13-JUL-11 1TZC 1 VERSN REVDAT 3 24-FEB-09 1TZC 1 VERSN REVDAT 2 02-NOV-04 1TZC 1 JRNL REVDAT 1 20-JUL-04 1TZC 0 JRNL AUTH M.K.SWAN,T.HANSEN,P.SCHOENHEIT,C.DAVIES JRNL TITL A NOVEL PHOSPHOGLUCOSE/PHOSPHOMANNOSE ISOMEASE FROM THE JRNL TITL 2 CRENARCHAEON PYROBACULUM AEROPHILUM IS A MEMBER OF THE PGI JRNL TITL 3 SUPERFAMILY: STRUCTURAL EVIDENCE AT 1.16 A RESOLUTION JRNL REF J.BIOL.CHEM. V. 279 39838 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 15252053 JRNL DOI 10.1074/JBC.M406855200 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.K.SWAN,T.HANSEN,P.SCHOENHEIT,C.DAVIES REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY X-RAY DIFFRACTION ANALYSIS REMARK 1 TITL 2 OF PHOSPHOGLUCOSE/PHOSPHOMANNOSE ISOMERASE FROM PYROBACULUM REMARK 1 TITL 3 AEROPHILUM REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 3 NUMBER OF REFLECTIONS : 97736 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4866 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6518 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3900 REMARK 3 BIN FREE R VALUE SET COUNT : 366 REMARK 3 BIN FREE R VALUE : 0.4020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4717 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 67 REMARK 3 SOLVENT ATOMS : 439 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.37000 REMARK 3 B22 (A**2) : -0.04000 REMARK 3 B33 (A**2) : 0.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.26000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.068 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.068 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.041 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.075 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4929 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4678 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6707 ; 1.273 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10851 ; 1.091 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 602 ; 5.827 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 776 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5334 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 953 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 932 ; 0.209 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 5479 ; 0.233 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 2928 ; 0.081 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 356 ; 0.130 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 9 ; 0.104 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 58 ; 0.257 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.144 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3023 ; 0.586 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4924 ; 1.099 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1906 ; 1.829 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1778 ; 3.147 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1TZC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUL-04. REMARK 100 THE DEPOSITION ID IS D_1000023051. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-OCT-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 97954 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 36.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : 0.07800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.46200 REMARK 200 R SYM FOR SHELL (I) : 0.46200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: REFINEMENT FROM NATIVE REMARK 200 STRUCTURE REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NATIVE STRUCTURE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% POLYETHYLENE GLYCOL 8000, 0.22M REMARK 280 AMMONIUM SULPHATE, 100MM TRIS, PH 8.5 , VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.42500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A DIMER. THE ASYMMETRIC UNIT IS A REMARK 300 DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -71.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 301 O HOH A 623 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 301 N - CA - C ANGL. DEV. = 20.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 65 59.95 -92.72 REMARK 500 ASN A 220 -69.45 -160.49 REMARK 500 MET A 261 36.23 -93.47 REMARK 500 ASN B 220 -72.66 -162.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU A 301 GLN A 302 -62.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 451 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 452 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 453 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 454 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 455 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PA5 A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PA5 B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1TZB RELATED DB: PDB DBREF 1TZC A 1 302 UNP Q8ZWV0 Q8ZWV0_PYRAE 1 302 DBREF 1TZC B 1 302 UNP Q8ZWV0 Q8ZWV0_PYRAE 1 302 SEQRES 1 A 302 MET SER GLN LEU LEU GLN ASP TYR LEU ASN TRP GLU ASN SEQRES 2 A 302 TYR ILE LEU ARG ARG VAL ASP PHE PRO THR SER TYR VAL SEQRES 3 A 302 VAL GLU GLY GLU VAL VAL ARG ILE GLU ALA MET PRO ARG SEQRES 4 A 302 LEU TYR ILE SER GLY MET GLY GLY SER GLY VAL VAL ALA SEQRES 5 A 302 ASP LEU ILE ARG ASP PHE SER LEU THR TRP ASN TRP GLU SEQRES 6 A 302 VAL GLU VAL ILE ALA VAL LYS ASP TYR PHE LEU LYS ALA SEQRES 7 A 302 ARG ASP GLY LEU LEU ILE ALA VAL SER TYR SER GLY ASN SEQRES 8 A 302 THR ILE GLU THR LEU TYR THR VAL GLU TYR ALA LYS ARG SEQRES 9 A 302 ARG ARG ILE PRO ALA VAL ALA ILE THR THR GLY GLY ARG SEQRES 10 A 302 LEU ALA GLN MET GLY VAL PRO THR VAL ILE VAL PRO LYS SEQRES 11 A 302 ALA SER ALA PRO ARG ALA ALA LEU PRO GLN LEU LEU THR SEQRES 12 A 302 ALA ALA LEU HIS VAL VAL ALA LYS VAL TYR GLY ILE ASP SEQRES 13 A 302 VAL LYS ILE PRO GLU GLY LEU GLU PRO PRO ASN GLU ALA SEQRES 14 A 302 LEU ILE HIS LYS LEU VAL GLU GLU PHE GLN LYS ARG PRO SEQRES 15 A 302 THR ILE ILE ALA ALA GLU SER MET ARG GLY VAL ALA TYR SEQRES 16 A 302 ARG VAL LYS ASN GLU PHE ASN GLU ASN ALA LYS ILE GLU SEQRES 17 A 302 PRO SER VAL GLU ILE LEU PRO GLU ALA HIS HIS ASN TRP SEQRES 18 A 302 ILE GLU GLY SER GLU ARG ALA VAL VAL ALA LEU THR SER SEQRES 19 A 302 PRO HIS ILE PRO LYS GLU HIS GLN GLU ARG VAL LYS ALA SEQRES 20 A 302 THR VAL GLU ILE VAL GLY GLY SER ILE TYR ALA VAL GLU SEQRES 21 A 302 MET HIS PRO LYS GLY VAL LEU SER PHE LEU ARG ASP VAL SEQRES 22 A 302 GLY ILE ALA SER VAL LYS LEU ALA GLU ILE ARG GLY VAL SEQRES 23 A 302 ASN PRO LEU ALA THR PRO ARG ILE ASP ALA LEU LYS ARG SEQRES 24 A 302 ARG LEU GLN SEQRES 1 B 302 MET SER GLN LEU LEU GLN ASP TYR LEU ASN TRP GLU ASN SEQRES 2 B 302 TYR ILE LEU ARG ARG VAL ASP PHE PRO THR SER TYR VAL SEQRES 3 B 302 VAL GLU GLY GLU VAL VAL ARG ILE GLU ALA MET PRO ARG SEQRES 4 B 302 LEU TYR ILE SER GLY MET GLY GLY SER GLY VAL VAL ALA SEQRES 5 B 302 ASP LEU ILE ARG ASP PHE SER LEU THR TRP ASN TRP GLU SEQRES 6 B 302 VAL GLU VAL ILE ALA VAL LYS ASP TYR PHE LEU LYS ALA SEQRES 7 B 302 ARG ASP GLY LEU LEU ILE ALA VAL SER TYR SER GLY ASN SEQRES 8 B 302 THR ILE GLU THR LEU TYR THR VAL GLU TYR ALA LYS ARG SEQRES 9 B 302 ARG ARG ILE PRO ALA VAL ALA ILE THR THR GLY GLY ARG SEQRES 10 B 302 LEU ALA GLN MET GLY VAL PRO THR VAL ILE VAL PRO LYS SEQRES 11 B 302 ALA SER ALA PRO ARG ALA ALA LEU PRO GLN LEU LEU THR SEQRES 12 B 302 ALA ALA LEU HIS VAL VAL ALA LYS VAL TYR GLY ILE ASP SEQRES 13 B 302 VAL LYS ILE PRO GLU GLY LEU GLU PRO PRO ASN GLU ALA SEQRES 14 B 302 LEU ILE HIS LYS LEU VAL GLU GLU PHE GLN LYS ARG PRO SEQRES 15 B 302 THR ILE ILE ALA ALA GLU SER MET ARG GLY VAL ALA TYR SEQRES 16 B 302 ARG VAL LYS ASN GLU PHE ASN GLU ASN ALA LYS ILE GLU SEQRES 17 B 302 PRO SER VAL GLU ILE LEU PRO GLU ALA HIS HIS ASN TRP SEQRES 18 B 302 ILE GLU GLY SER GLU ARG ALA VAL VAL ALA LEU THR SER SEQRES 19 B 302 PRO HIS ILE PRO LYS GLU HIS GLN GLU ARG VAL LYS ALA SEQRES 20 B 302 THR VAL GLU ILE VAL GLY GLY SER ILE TYR ALA VAL GLU SEQRES 21 B 302 MET HIS PRO LYS GLY VAL LEU SER PHE LEU ARG ASP VAL SEQRES 22 B 302 GLY ILE ALA SER VAL LYS LEU ALA GLU ILE ARG GLY VAL SEQRES 23 B 302 ASN PRO LEU ALA THR PRO ARG ILE ASP ALA LEU LYS ARG SEQRES 24 B 302 ARG LEU GLN HET SO4 A 451 5 HET SO4 A 455 5 HET PA5 A 600 15 HET GOL A 501 6 HET SO4 B 452 5 HET SO4 B 453 5 HET SO4 B 454 5 HET PA5 B 601 15 HET GOL B 502 6 HETNAM SO4 SULFATE ION HETNAM PA5 5-PHOSPHOARABINONIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SO4 5(O4 S 2-) FORMUL 5 PA5 2(C5 H11 O9 P) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 12 HOH *439(H2 O) HELIX 1 1 SER A 2 ASN A 10 1 9 HELIX 2 2 TRP A 11 ILE A 15 5 5 HELIX 3 3 MET A 45 TRP A 62 1 18 HELIX 4 4 THR A 92 ARG A 106 1 15 HELIX 5 5 ARG A 117 MET A 121 5 5 HELIX 6 6 ALA A 133 ALA A 136 5 4 HELIX 7 7 ALA A 137 GLY A 154 1 18 HELIX 8 8 ASN A 167 GLN A 179 1 13 HELIX 9 9 MET A 190 ASN A 204 1 15 HELIX 10 10 PRO A 215 HIS A 219 5 5 HELIX 11 11 ASN A 220 SER A 225 1 6 HELIX 12 12 PRO A 238 GLY A 253 1 16 HELIX 13 13 HIS A 262 GLY A 285 1 24 HELIX 14 14 THR A 291 GLN A 302 1 12 HELIX 15 15 SER B 2 ASN B 10 1 9 HELIX 16 16 TRP B 11 ILE B 15 5 5 HELIX 17 17 MET B 45 TRP B 62 1 18 HELIX 18 18 THR B 92 ARG B 105 1 14 HELIX 19 19 ARG B 117 MET B 121 5 5 HELIX 20 20 ALA B 133 ALA B 136 5 4 HELIX 21 21 ALA B 137 GLY B 154 1 18 HELIX 22 22 ASN B 167 GLN B 179 1 13 HELIX 23 23 MET B 190 ASN B 204 1 15 HELIX 24 24 PRO B 215 HIS B 219 5 5 HELIX 25 25 ASN B 220 SER B 225 1 6 HELIX 26 26 PRO B 238 GLY B 253 1 16 HELIX 27 27 HIS B 262 GLY B 285 1 24 HELIX 28 28 THR B 291 GLN B 302 1 12 SHEET 1 A 2 SER A 24 VAL A 27 0 SHEET 2 A 2 GLU A 30 ARG A 33 -1 O VAL A 32 N TYR A 25 SHEET 1 B 5 GLU A 67 VAL A 71 0 SHEET 2 B 5 ARG A 39 SER A 43 1 N LEU A 40 O GLU A 67 SHEET 3 B 5 LEU A 82 VAL A 86 1 O LEU A 82 N TYR A 41 SHEET 4 B 5 ALA A 109 THR A 113 1 O VAL A 110 N ALA A 85 SHEET 5 B 5 THR A 125 ILE A 127 1 O VAL A 126 N ALA A 111 SHEET 1 C 4 SER A 210 LEU A 214 0 SHEET 2 C 4 THR A 183 ALA A 187 1 N ILE A 184 O SER A 210 SHEET 3 C 4 VAL A 229 THR A 233 1 O LEU A 232 N ILE A 185 SHEET 4 C 4 SER A 255 ALA A 258 1 O SER A 255 N ALA A 231 SHEET 1 D 2 SER B 24 VAL B 27 0 SHEET 2 D 2 GLU B 30 ARG B 33 -1 O VAL B 32 N TYR B 25 SHEET 1 E 5 GLU B 67 VAL B 71 0 SHEET 2 E 5 ARG B 39 SER B 43 1 N LEU B 40 O GLU B 67 SHEET 3 E 5 LEU B 82 VAL B 86 1 O LEU B 82 N TYR B 41 SHEET 4 E 5 ALA B 109 THR B 113 1 O VAL B 110 N ALA B 85 SHEET 5 E 5 THR B 125 ILE B 127 1 O VAL B 126 N ALA B 111 SHEET 1 F 4 SER B 210 LEU B 214 0 SHEET 2 F 4 THR B 183 ALA B 187 1 N ILE B 184 O SER B 210 SHEET 3 F 4 VAL B 229 THR B 233 1 O LEU B 232 N ILE B 185 SHEET 4 F 4 SER B 255 ALA B 258 1 O SER B 255 N ALA B 231 CISPEP 1 LEU A 214 PRO A 215 0 3.68 CISPEP 2 LEU A 301 GLN A 302 0 -17.48 CISPEP 3 LEU B 214 PRO B 215 0 5.64 SITE 1 AC1 6 ARG A 181 ARG A 284 HOH A 780 HOH A 809 SITE 2 AC1 6 ARG B 106 HOH B 761 SITE 1 AC2 2 ARG B 104 ARG B 105 SITE 1 AC3 4 GLN B 179 ARG B 181 ARG B 284 HOH B 775 SITE 1 AC4 3 HOH A 771 ARG B 299 ARG B 300 SITE 1 AC5 2 ARG A 104 ARG A 105 SITE 1 AC6 16 MET A 45 GLY A 46 GLY A 47 SER A 48 SITE 2 AC6 16 SER A 87 TYR A 88 SER A 89 THR A 92 SITE 3 AC6 16 PRO A 134 ARG A 135 GLU A 203 LYS A 298 SITE 4 AC6 16 HOH A 601 HOH A 617 HOH A 705 HIS B 219 SITE 1 AC7 17 HIS A 219 MET B 45 GLY B 46 GLY B 47 SITE 2 AC7 17 SER B 48 SER B 87 TYR B 88 SER B 89 SITE 3 AC7 17 THR B 92 PRO B 134 ARG B 135 GLU B 203 SITE 4 AC7 17 LYS B 298 HOH B 608 HOH B 622 HOH B 645 SITE 5 AC7 17 HOH B 648 SITE 1 AC8 4 THR A 233 GLN A 242 HOH A 708 HOH A 811 SITE 1 AC9 6 PHE A 75 LYS A 77 SER B 59 LEU B 60 SITE 2 AC9 6 ASN B 63 HOH B 806 CRYST1 55.800 100.850 55.800 90.00 113.70 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017908 0.000000 0.007854 0.00000 SCALE2 0.000000 0.009916 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019568 0.00000