PDB Short entry for 1U6S HEADER TRANSFERASE 30-JUL-04 1U6S TITLE CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN MYCOBACTERIUM TUBERCULOSIS TITLE 2 BETA-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III AND LAUROYL COENZYME TITLE 3 A COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BETA-KETOACYL-ACP SYNTHASE III, KAS III, MTFABH; COMPND 5 EC: 2.3.1.41; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: FABH; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS FATTY ACID BIOSYNTHESIS, MYCOBACTERIUM TUBERCULOSIS, SUBSTRATE KEYWDS 2 COMPLEX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR F.MUSAYEV,S.SACHDEVA,J.N.SCARSDALE,K.A.REYNOLDS,H.T.WRIGHT REVDAT 6 23-AUG-23 1U6S 1 REMARK REVDAT 5 20-OCT-21 1U6S 1 REMARK SEQADV REVDAT 4 11-OCT-17 1U6S 1 REMARK REVDAT 3 13-JUL-11 1U6S 1 VERSN REVDAT 2 24-FEB-09 1U6S 1 VERSN REVDAT 1 22-MAR-05 1U6S 0 JRNL AUTH F.MUSAYEV,S.SACHDEVA,J.N.SCARSDALE,K.A.REYNOLDS,H.T.WRIGHT JRNL TITL CRYSTAL STRUCTURE OF A SUBSTRATE COMPLEX OF MYCOBACTERIUM JRNL TITL 2 TUBERCULOSIS BETA-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III JRNL TITL 3 (FABH) WITH LAUROYL-COENZYME A. JRNL REF J.MOL.BIOL. V. 346 1313 2005 JRNL REFN ISSN 0022-2836 JRNL PMID 15713483 JRNL DOI 10.1016/J.JMB.2004.12.044 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.N.SCARSDALE,G.KAZANINA,X.HE,K.A.REYNOLDS,H.T.WRIGHT REMARK 1 TITL CRYSTAL STRUCTURE OF THE MYCOBACTERIUM TUBERCULOSIS REMARK 1 TITL 2 BETA-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III REMARK 1 REF J.BIOL.CHEM. V. 276 20516 2001 REMARK 1 REFN ISSN 0021-9258 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.74 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 3 NUMBER OF REFLECTIONS : 26965 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1431 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1885 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3330 REMARK 3 BIN FREE R VALUE SET COUNT : 96 REMARK 3 BIN FREE R VALUE : 0.4120 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4857 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 122 REMARK 3 SOLVENT ATOMS : 193 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 46.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.52000 REMARK 3 B22 (A**2) : 1.30000 REMARK 3 B33 (A**2) : 0.48000 REMARK 3 B12 (A**2) : -0.65000 REMARK 3 B13 (A**2) : -0.02000 REMARK 3 B23 (A**2) : 1.68000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.452 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.258 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.212 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.454 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5104 ; 0.008 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6954 ; 1.323 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 670 ; 4.779 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 793 ; 0.132 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3879 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2643 ; 0.207 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 286 ; 0.119 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 59 ; 0.186 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.253 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3317 ; 0.376 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5278 ; 0.690 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1787 ; 0.948 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1676 ; 1.688 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 7 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 10 A 23 4 REMARK 3 1 B 10 B 23 4 REMARK 3 2 A 25 A 42 4 REMARK 3 2 B 25 B 42 4 REMARK 3 3 A 44 A 186 4 REMARK 3 3 B 44 B 186 4 REMARK 3 4 A 188 A 200 4 REMARK 3 4 B 188 B 200 4 REMARK 3 5 A 202 A 207 4 REMARK 3 5 B 202 B 207 4 REMARK 3 6 A 209 A 213 4 REMARK 3 6 B 209 B 213 4 REMARK 3 7 A 215 A 228 4 REMARK 3 7 B 215 B 228 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1556 ; 0.11 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1556 ; 0.25 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 319 REMARK 3 ORIGIN FOR THE GROUP (A): 0.2585 -11.9935 -7.6912 REMARK 3 T TENSOR REMARK 3 T11: 0.0263 T22: 0.0548 REMARK 3 T33: 0.0289 T12: -0.0203 REMARK 3 T13: -0.0053 T23: 0.0259 REMARK 3 L TENSOR REMARK 3 L11: 0.9739 L22: 0.8188 REMARK 3 L33: 0.4058 L12: -0.1707 REMARK 3 L13: -0.1048 L23: 0.0651 REMARK 3 S TENSOR REMARK 3 S11: -0.0171 S12: 0.0287 S13: -0.1058 REMARK 3 S21: -0.0372 S22: 0.0227 S23: 0.0381 REMARK 3 S31: 0.0205 S32: -0.0157 S33: -0.0056 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 319 REMARK 3 ORIGIN FOR THE GROUP (A): 0.6579 12.5370 9.1579 REMARK 3 T TENSOR REMARK 3 T11: 0.0865 T22: 0.0642 REMARK 3 T33: 0.0178 T12: -0.0223 REMARK 3 T13: -0.0149 T23: 0.0209 REMARK 3 L TENSOR REMARK 3 L11: 0.8872 L22: 0.8662 REMARK 3 L33: 0.5050 L12: -0.1609 REMARK 3 L13: -0.0939 L23: 0.0833 REMARK 3 S TENSOR REMARK 3 S11: 0.0139 S12: -0.0553 S13: 0.0621 REMARK 3 S21: 0.1084 S22: 0.0012 S23: 0.0055 REMARK 3 S31: -0.0837 S32: 0.0070 S33: -0.0152 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURE WAS REFINED INITIALLY WITH REMARK 3 CNS 1.0, FOLLOWED BY REFINEMENT WITH REFMAC 5.1.24 REMARK 4 REMARK 4 1U6S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-AUG-04. REMARK 100 THE DEPOSITION ID IS D_1000023316. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-03 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC CONFOCAL OPTICS REMARK 200 OPTICS : OSMIC CONFOCAL OPTICS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS II REMARK 200 INTENSITY-INTEGRATION SOFTWARE : BIOTEX REMARK 200 DATA SCALING SOFTWARE : BIOTEX REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28396 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 57.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.26000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1HZP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M AMMONIUM FORMATE, 100 MM NA HEPES REMARK 280 BUFFER, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS THE DIMER REMARK 300 CONTAINED IN THE ASSYMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -80.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 317C REMARK 465 GLY B 317C REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 43 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 229 CG OD1 OD2 REMARK 470 ARG B 1 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 24 CG CD OE1 NE2 REMARK 470 ARG B 214 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 147 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP B 147 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 84 37.33 -88.75 REMARK 500 ALA A 110 39.76 -161.53 REMARK 500 LYS A 141 71.60 -112.88 REMARK 500 ASN A 153 -13.88 -151.24 REMARK 500 ASN A 201 60.62 -152.15 REMARK 500 ASN A 247 128.91 -172.41 REMARK 500 SER A 276 -121.15 40.18 REMARK 500 LEU A 308 85.92 67.22 REMARK 500 PRO A 317A -158.17 -82.77 REMARK 500 PHE B 84 40.30 -87.77 REMARK 500 ALA B 110 49.19 -168.44 REMARK 500 LYS B 141 78.65 -116.85 REMARK 500 ASN B 153 -12.20 -150.53 REMARK 500 ASN B 247 131.68 -170.97 REMARK 500 SER B 276 -122.05 39.27 REMARK 500 ALA B 306 155.68 -48.65 REMARK 500 LEU B 308 82.07 73.24 REMARK 500 PRO B 317A -158.32 -78.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DCC A 960 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DCC B 961 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1HZP RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE MYCOBACTERIUM TUBERCULOSIS BETA-KETOACYL- REMARK 900 ACYL CARRIER PROTEIN SYNTHASE III REMARK 900 RELATED ID: 1U6E RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF C112A MUTANT OF MYCOBACTERIUM TUBERCULOSIS REMARK 900 BETA-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III REMARK 900 RELATED ID: 1EBL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF E. COLI FABH REMARK 900 RELATED ID: 1HNJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF E. COLI FABH + MALONYL COA DBREF 1U6S A -10 317C UNP P0A574 FABH_MYCTU 1 335 DBREF 1U6S B -10 317C UNP P0A574 FABH_MYCTU 1 335 SEQADV 1U6S ALA A 112 UNP P0A574 CYS 122 ENGINEERED MUTATION SEQADV 1U6S ALA B 112 UNP P0A574 CYS 122 ENGINEERED MUTATION SEQRES 1 A 335 MET THR GLU ILE ALA THR THR SER GLY ALA ARG SER VAL SEQRES 2 A 335 GLY LEU LEU SER VAL GLY ALA TYR ARG PRO GLU ARG VAL SEQRES 3 A 335 VAL THR ASN ASP GLU ILE CYS GLN HIS ILE ASP SER SER SEQRES 4 A 335 ASP GLU TRP ILE TYR THR ARG THR GLY ILE LYS THR ARG SEQRES 5 A 335 ARG PHE ALA ALA ASP ASP GLU SER ALA ALA SER MET ALA SEQRES 6 A 335 THR GLU ALA CYS ARG ARG ALA LEU SER ASN ALA GLY LEU SEQRES 7 A 335 SER ALA ALA ASP ILE ASP GLY VAL ILE VAL THR THR ASN SEQRES 8 A 335 THR HIS PHE LEU GLN THR PRO PRO ALA ALA PRO MET VAL SEQRES 9 A 335 ALA ALA SER LEU GLY ALA LYS GLY ILE LEU GLY PHE ASP SEQRES 10 A 335 LEU SER ALA GLY ALA ALA GLY PHE GLY TYR ALA LEU GLY SEQRES 11 A 335 ALA ALA ALA ASP MET ILE ARG GLY GLY GLY ALA ALA THR SEQRES 12 A 335 MET LEU VAL VAL GLY THR GLU LYS LEU SER PRO THR ILE SEQRES 13 A 335 ASP MET TYR ASP ARG GLY ASN CYS PHE ILE PHE ALA ASP SEQRES 14 A 335 GLY ALA ALA ALA VAL VAL VAL GLY GLU THR PRO PHE GLN SEQRES 15 A 335 GLY ILE GLY PRO THR VAL ALA GLY SER ASP GLY GLU GLN SEQRES 16 A 335 ALA ASP ALA ILE ARG GLN ASP ILE ASP TRP ILE THR PHE SEQRES 17 A 335 ALA GLN ASN PRO SER GLY PRO ARG PRO PHE VAL ARG LEU SEQRES 18 A 335 GLU GLY PRO ALA VAL PHE ARG TRP ALA ALA PHE LYS MET SEQRES 19 A 335 GLY ASP VAL GLY ARG ARG ALA MET ASP ALA ALA GLY VAL SEQRES 20 A 335 ARG PRO ASP GLN ILE ASP VAL PHE VAL PRO HIS GLN ALA SEQRES 21 A 335 ASN SER ARG ILE ASN GLU LEU LEU VAL LYS ASN LEU GLN SEQRES 22 A 335 LEU ARG PRO ASP ALA VAL VAL ALA ASN ASP ILE GLU HIS SEQRES 23 A 335 THR GLY ASN THR SER ALA ALA SER ILE PRO LEU ALA MET SEQRES 24 A 335 ALA GLU LEU LEU THR THR GLY ALA ALA LYS PRO GLY ASP SEQRES 25 A 335 LEU ALA LEU LEU ILE GLY TYR GLY ALA GLY LEU SER TYR SEQRES 26 A 335 ALA ALA GLN VAL VAL ARG MET PRO LYS GLY SEQRES 1 B 335 MET THR GLU ILE ALA THR THR SER GLY ALA ARG SER VAL SEQRES 2 B 335 GLY LEU LEU SER VAL GLY ALA TYR ARG PRO GLU ARG VAL SEQRES 3 B 335 VAL THR ASN ASP GLU ILE CYS GLN HIS ILE ASP SER SER SEQRES 4 B 335 ASP GLU TRP ILE TYR THR ARG THR GLY ILE LYS THR ARG SEQRES 5 B 335 ARG PHE ALA ALA ASP ASP GLU SER ALA ALA SER MET ALA SEQRES 6 B 335 THR GLU ALA CYS ARG ARG ALA LEU SER ASN ALA GLY LEU SEQRES 7 B 335 SER ALA ALA ASP ILE ASP GLY VAL ILE VAL THR THR ASN SEQRES 8 B 335 THR HIS PHE LEU GLN THR PRO PRO ALA ALA PRO MET VAL SEQRES 9 B 335 ALA ALA SER LEU GLY ALA LYS GLY ILE LEU GLY PHE ASP SEQRES 10 B 335 LEU SER ALA GLY ALA ALA GLY PHE GLY TYR ALA LEU GLY SEQRES 11 B 335 ALA ALA ALA ASP MET ILE ARG GLY GLY GLY ALA ALA THR SEQRES 12 B 335 MET LEU VAL VAL GLY THR GLU LYS LEU SER PRO THR ILE SEQRES 13 B 335 ASP MET TYR ASP ARG GLY ASN CYS PHE ILE PHE ALA ASP SEQRES 14 B 335 GLY ALA ALA ALA VAL VAL VAL GLY GLU THR PRO PHE GLN SEQRES 15 B 335 GLY ILE GLY PRO THR VAL ALA GLY SER ASP GLY GLU GLN SEQRES 16 B 335 ALA ASP ALA ILE ARG GLN ASP ILE ASP TRP ILE THR PHE SEQRES 17 B 335 ALA GLN ASN PRO SER GLY PRO ARG PRO PHE VAL ARG LEU SEQRES 18 B 335 GLU GLY PRO ALA VAL PHE ARG TRP ALA ALA PHE LYS MET SEQRES 19 B 335 GLY ASP VAL GLY ARG ARG ALA MET ASP ALA ALA GLY VAL SEQRES 20 B 335 ARG PRO ASP GLN ILE ASP VAL PHE VAL PRO HIS GLN ALA SEQRES 21 B 335 ASN SER ARG ILE ASN GLU LEU LEU VAL LYS ASN LEU GLN SEQRES 22 B 335 LEU ARG PRO ASP ALA VAL VAL ALA ASN ASP ILE GLU HIS SEQRES 23 B 335 THR GLY ASN THR SER ALA ALA SER ILE PRO LEU ALA MET SEQRES 24 B 335 ALA GLU LEU LEU THR THR GLY ALA ALA LYS PRO GLY ASP SEQRES 25 B 335 LEU ALA LEU LEU ILE GLY TYR GLY ALA GLY LEU SER TYR SEQRES 26 B 335 ALA ALA GLN VAL VAL ARG MET PRO LYS GLY HET DCC A 960 61 HET DCC B 961 61 HETNAM DCC DODECYL-COA FORMUL 3 DCC 2(C33 H58 N7 O17 P3 S) FORMUL 5 HOH *193(H2 O) HELIX 1 1 ASN A 19 CYS A 23 1 5 HELIX 2 2 SER A 29 GLY A 38 1 10 HELIX 3 3 SER A 50 ALA A 66 1 17 HELIX 4 4 SER A 69 ILE A 73 5 5 HELIX 5 5 PRO A 89 LEU A 98 1 10 HELIX 6 6 ALA A 110 ALA A 112 5 3 HELIX 7 7 ALA A 113 GLY A 129 1 17 HELIX 8 8 SER A 143 ILE A 146 5 4 HELIX 9 9 GLY A 183 ALA A 186 5 4 HELIX 10 10 ASP A 194 GLN A 200 1 7 HELIX 11 11 GLU A 208 GLY A 232 1 25 HELIX 12 12 ARG A 234 ILE A 238 5 5 HELIX 13 13 ASN A 247 GLN A 259 1 13 HELIX 14 14 ASP A 268 GLY A 273 1 6 HELIX 15 15 THR A 275 ALA A 277 5 3 HELIX 16 16 ALA A 278 THR A 290 1 13 HELIX 17 17 ASN B 19 CYS B 23 1 5 HELIX 18 18 GLN B 24 ILE B 26 5 3 HELIX 19 19 SER B 29 GLY B 38 1 10 HELIX 20 20 SER B 50 GLY B 67 1 18 HELIX 21 21 SER B 69 ILE B 73 5 5 HELIX 22 22 PRO B 89 GLY B 99 1 11 HELIX 23 23 ALA B 110 ALA B 112 5 3 HELIX 24 24 ALA B 113 GLY B 129 1 17 HELIX 25 25 SER B 143 ILE B 146 5 4 HELIX 26 26 GLY B 183 ALA B 186 5 4 HELIX 27 27 ASP B 194 ASN B 201 1 8 HELIX 28 28 GLU B 208 ALA B 231 1 24 HELIX 29 29 ARG B 234 ILE B 238 5 5 HELIX 30 30 ASN B 247 GLN B 259 1 13 HELIX 31 31 ASP B 268 GLY B 273 1 6 HELIX 32 32 THR B 275 ALA B 277 5 3 HELIX 33 33 ALA B 278 THR B 290 1 13 SHEET 1 A10 VAL A 3 TYR A 11 0 SHEET 2 A10 ASP A 159 GLU A 168 -1 O ALA A 161 N TYR A 11 SHEET 3 A10 MET A 134 LYS A 141 -1 N MET A 134 O VAL A 166 SHEET 4 A10 GLY A 75 THR A 79 1 N GLY A 75 O LEU A 135 SHEET 5 A10 LEU A 104 SER A 109 1 O LEU A 108 N VAL A 78 SHEET 6 A10 LEU B 104 SER B 109 -1 O SER B 109 N ASP A 107 SHEET 7 A10 GLY B 75 THR B 79 1 N VAL B 78 O LEU B 108 SHEET 8 A10 MET B 134 LYS B 141 1 O VAL B 137 N THR B 79 SHEET 9 A10 ASP B 159 GLU B 168 -1 O VAL B 166 N MET B 134 SHEET 10 A10 VAL B 3 TYR B 11 -1 N TYR B 11 O ALA B 161 SHEET 1 B 2 ARG A 15 THR A 18 0 SHEET 2 B 2 THR A 41 PHE A 44 -1 O ARG A 42 N VAL A 17 SHEET 1 C 5 VAL A 178 SER A 181 0 SHEET 2 C 5 SER A 309 ARG A 316 -1 O ALA A 312 N VAL A 178 SHEET 3 C 5 LEU A 298 GLY A 305 -1 N ALA A 299 O VAL A 315 SHEET 4 C 5 VAL A 240 PRO A 243 1 N VAL A 242 O LEU A 300 SHEET 5 C 5 VAL A 264 VAL A 265 1 O VAL A 264 N PHE A 241 SHEET 1 D 2 ILE A 189 GLN A 191 0 SHEET 2 D 2 VAL A 205 LEU A 207 -1 O ARG A 206 N ARG A 190 SHEET 1 E 2 ARG B 15 THR B 18 0 SHEET 2 E 2 THR B 41 PHE B 44 -1 O ARG B 42 N VAL B 17 SHEET 1 F 5 VAL B 178 SER B 181 0 SHEET 2 F 5 SER B 309 ARG B 316 -1 O ALA B 312 N VAL B 178 SHEET 3 F 5 LEU B 298 GLY B 305 -1 N ALA B 299 O VAL B 315 SHEET 4 F 5 VAL B 240 PRO B 243 1 N VAL B 242 O LEU B 300 SHEET 5 F 5 VAL B 264 VAL B 265 1 O VAL B 264 N PHE B 241 SHEET 1 G 2 ILE B 189 GLN B 191 0 SHEET 2 G 2 VAL B 205 LEU B 207 -1 O ARG B 206 N ARG B 190 CISPEP 1 THR A 87 PRO A 88 0 0.40 CISPEP 2 THR B 87 PRO B 88 0 2.24 SITE 1 AC1 26 ASP A 27 SER A 28 TRP A 32 THR A 37 SITE 2 AC1 26 ALA A 112 LEU A 142 THR A 145 ARG A 151 SITE 3 AC1 26 ILE A 156 ILE A 189 TRP A 195 PRO A 203 SITE 4 AC1 26 VAL A 205 LEU A 207 GLY A 209 PHE A 213 SITE 5 AC1 26 HIS A 244 ALA A 246 ASN A 247 ASN A 274 SITE 6 AC1 26 SER A 276 GLY A 305 ALA A 306 ARG B 36 SITE 7 AC1 26 ARG B 151 DCC B 961 SITE 1 AC2 28 DCC A 960 SER B 28 SER B 29 TRP B 32 SITE 2 AC2 28 ALA B 112 LEU B 142 THR B 145 ARG B 151 SITE 3 AC2 28 GLY B 152 ILE B 156 ILE B 189 GLN B 191 SITE 4 AC2 28 TRP B 195 ARG B 202D PRO B 203 VAL B 205 SITE 5 AC2 28 LEU B 207 GLY B 209 PRO B 210 PHE B 213 SITE 6 AC2 28 HIS B 244 ALA B 246 ASN B 247 ILE B 250 SITE 7 AC2 28 ASN B 274 SER B 276 GLY B 305 ALA B 306 CRYST1 55.570 63.190 55.330 113.25 100.82 92.66 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017995 0.000836 0.004150 0.00000 SCALE2 0.000000 0.015842 0.007147 0.00000 SCALE3 0.000000 0.000000 0.020186 0.00000